Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50403.t1 | XP_003604990.1 | 98.4 | 126 | 2 | 0 | 40 | 165 | 65 | 190 | 9.00E-49 | 203.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50403.t1 | O48850 | 76.4 | 123 | 29 | 0 | 40 | 162 | 130 | 252 | 4.4e-44 | 179.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50403.t1 | G7JUL3 | 98.4 | 126 | 2 | 0 | 40 | 165 | 65 | 190 | 6.5e-49 | 203.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050945 | MS.gene50403 | 0.81385 | 2.08E-51 | -1.69E-46 |
| MS.gene051043 | MS.gene50403 | 0.822142 | 2.77E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene50403 | 0.83338 | 5.51E-56 | -1.69E-46 |
| MS.gene052533 | MS.gene50403 | 0.817192 | 3.75E-52 | -1.69E-46 |
| MS.gene054413 | MS.gene50403 | 0.819108 | 1.38E-52 | -1.69E-46 |
| MS.gene055150 | MS.gene50403 | 0.813284 | 2.77E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene50403 | 0.808284 | 3.34E-50 | -1.69E-46 |
| MS.gene059778 | MS.gene50403 | 0.80718 | 5.73E-50 | -1.69E-46 |
| MS.gene05985 | MS.gene50403 | -0.809183 | 2.15E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50403.t1 | MTR_4g022570 | 87.755 | 147 | 9 | 1 | 19 | 165 | 53 | 190 | 2.38e-87 | 258 |
| MS.gene50403.t1 | MTR_1g047710 | 77.692 | 130 | 29 | 0 | 33 | 162 | 6 | 135 | 5.00e-75 | 223 |
| MS.gene50403.t1 | MTR_7g058900 | 85.366 | 123 | 18 | 0 | 40 | 162 | 65 | 187 | 1.47e-74 | 225 |
| MS.gene50403.t1 | MTR_1g047720 | 81.301 | 123 | 23 | 0 | 40 | 162 | 65 | 187 | 8.50e-74 | 223 |
| MS.gene50403.t1 | MTR_4g022470 | 92.035 | 113 | 9 | 0 | 34 | 146 | 5 | 117 | 4.19e-73 | 218 |
| MS.gene50403.t1 | MTR_4g083490 | 80.488 | 123 | 24 | 0 | 40 | 162 | 67 | 189 | 1.53e-71 | 218 |
| MS.gene50403.t1 | MTR_2g028790 | 76.423 | 123 | 29 | 0 | 40 | 162 | 69 | 191 | 5.84e-68 | 209 |
| MS.gene50403.t1 | MTR_7g058640 | 74.603 | 126 | 32 | 0 | 40 | 165 | 65 | 190 | 1.67e-64 | 199 |
| MS.gene50403.t1 | MTR_2g436870 | 72.441 | 127 | 35 | 0 | 39 | 165 | 64 | 190 | 9.37e-63 | 195 |
| MS.gene50403.t1 | MTR_7g058640 | 75.893 | 112 | 27 | 0 | 54 | 165 | 1 | 112 | 5.55e-58 | 180 |
| MS.gene50403.t1 | MTR_7g058640 | 65.414 | 133 | 41 | 1 | 24 | 151 | 44 | 176 | 2.50e-57 | 181 |
| MS.gene50403.t1 | MTR_1g111890 | 54.795 | 146 | 47 | 1 | 39 | 165 | 64 | 209 | 1.24e-51 | 167 |
| MS.gene50403.t1 | MTR_5g089370 | 42.735 | 117 | 65 | 2 | 43 | 159 | 66 | 180 | 1.66e-25 | 99.8 |
| MS.gene50403.t1 | MTR_4g052550 | 36.585 | 123 | 76 | 2 | 40 | 162 | 63 | 183 | 2.51e-22 | 91.3 |
| MS.gene50403.t1 | MTR_4g115390 | 35.833 | 120 | 75 | 2 | 43 | 162 | 70 | 187 | 1.52e-20 | 86.7 |
| MS.gene50403.t1 | MTR_7g032985 | 100.000 | 34 | 0 | 0 | 1 | 34 | 1 | 34 | 3.15e-16 | 71.2 |
| MS.gene50403.t1 | MTR_4g022550 | 96.667 | 30 | 1 | 0 | 133 | 162 | 10 | 39 | 3.56e-13 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50403.t1 | AT2G33120 | 74.306 | 144 | 36 | 1 | 19 | 162 | 53 | 195 | 7.89e-76 | 229 |
| MS.gene50403.t1 | AT2G32670 | 84.553 | 123 | 19 | 0 | 40 | 162 | 130 | 252 | 1.10e-74 | 228 |
| MS.gene50403.t1 | AT2G33120 | 83.740 | 123 | 20 | 0 | 40 | 162 | 65 | 187 | 1.79e-74 | 225 |
| MS.gene50403.t1 | AT1G04750 | 82.114 | 123 | 22 | 0 | 40 | 162 | 65 | 187 | 3.52e-73 | 222 |
| MS.gene50403.t1 | AT1G04760 | 79.675 | 123 | 25 | 0 | 40 | 162 | 65 | 187 | 4.32e-72 | 219 |
| MS.gene50403.t1 | AT1G04760 | 79.675 | 123 | 25 | 0 | 40 | 162 | 65 | 187 | 4.32e-72 | 219 |
| MS.gene50403.t1 | AT1G04750 | 81.651 | 109 | 20 | 0 | 54 | 162 | 1 | 109 | 2.57e-63 | 194 |
| MS.gene50403.t1 | AT1G04750 | 81.651 | 109 | 20 | 0 | 54 | 162 | 1 | 109 | 2.57e-63 | 194 |
| MS.gene50403.t1 | AT1G04750 | 81.651 | 109 | 20 | 0 | 54 | 162 | 1 | 109 | 2.57e-63 | 194 |
| MS.gene50403.t1 | AT4G15780 | 69.565 | 115 | 35 | 0 | 39 | 153 | 65 | 179 | 6.44e-55 | 174 |
| MS.gene50403.t1 | AT3G54300 | 55.102 | 147 | 47 | 2 | 39 | 166 | 64 | 210 | 2.08e-49 | 162 |
| MS.gene50403.t1 | AT3G54300 | 55.102 | 147 | 47 | 2 | 39 | 166 | 64 | 210 | 2.08e-49 | 162 |
| MS.gene50403.t1 | AT3G54300 | 55.102 | 147 | 47 | 2 | 39 | 166 | 64 | 210 | 2.08e-49 | 162 |
| MS.gene50403.t1 | AT2G33110 | 61.475 | 122 | 43 | 1 | 40 | 161 | 65 | 182 | 1.55e-46 | 154 |
| MS.gene50403.t1 | AT2G33110 | 68.367 | 98 | 31 | 0 | 40 | 137 | 65 | 162 | 1.04e-44 | 148 |
| MS.gene50403.t1 | AT2G33120 | 87.719 | 57 | 7 | 0 | 109 | 165 | 52 | 108 | 8.34e-28 | 103 |
| MS.gene50403.t1 | AT5G11150 | 44.628 | 121 | 63 | 3 | 43 | 162 | 67 | 184 | 1.53e-26 | 102 |
| MS.gene50403.t1 | AT5G11150 | 44.628 | 121 | 63 | 3 | 43 | 162 | 67 | 184 | 1.77e-26 | 102 |
| MS.gene50403.t1 | AT4G32150 | 44.068 | 118 | 62 | 3 | 43 | 159 | 66 | 180 | 4.00e-26 | 101 |
| MS.gene50403.t1 | AT5G22360 | 39.024 | 123 | 73 | 2 | 40 | 162 | 64 | 184 | 5.10e-24 | 95.9 |
| MS.gene50403.t1 | AT2G25340 | 40.708 | 113 | 63 | 3 | 43 | 154 | 66 | 175 | 4.82e-22 | 90.9 |
| MS.gene50403.t1 | AT3G24890 | 41.964 | 112 | 53 | 3 | 88 | 193 | 14 | 119 | 5.60e-18 | 77.4 |
| MS.gene50403.t1 | AT3G24890 | 55.738 | 61 | 23 | 1 | 89 | 149 | 15 | 71 | 1.49e-15 | 69.7 |
| MS.gene50403.t1 | AT3G24890 | 55.738 | 61 | 23 | 1 | 89 | 149 | 15 | 71 | 1.49e-15 | 69.7 |
| MS.gene50403.t1 | AT3G24890 | 55.738 | 61 | 23 | 1 | 89 | 149 | 15 | 71 | 1.49e-15 | 69.7 |
| MS.gene50403.t1 | AT3G24890 | 55.738 | 61 | 23 | 1 | 89 | 149 | 15 | 71 | 1.49e-15 | 69.7 |
Find 53 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGTCTTAACAAAGAATT+TGG | 0.112791 | 4.4:+79221627 | MS.gene50403:CDS |
| ACTGGTTATCTCAGAAATTT+TGG | 0.134329 | 4.4:-79219412 | None:intergenic |
| GAACACAAAAGCCTCAATTT+TGG | 0.175865 | 4.4:+79224125 | MS.gene50403:CDS |
| TCCTTTCCCTTTCGCACTTC+TGG | 0.210511 | 4.4:-79224073 | None:intergenic |
| CGGATTGGTGCTTGGCCTTC+TGG | 0.211834 | 4.4:-79224008 | None:intergenic |
| TTCTGGCTTTCGTATTCTTC+TGG | 0.220983 | 4.4:-79224056 | None:intergenic |
| TCTTGATCCGTTTGTACTTC+TGG | 0.236860 | 4.4:-79224104 | None:intergenic |
| GGGAGAGAAGATTGAGGTTT+TGG | 0.245399 | 4.4:+79222080 | MS.gene50403:CDS |
| ACCACATCTTTCTCCTCAAC+TGG | 0.295387 | 4.4:-79222720 | None:intergenic |
| AGCAGTTTGATTCCTGTTCA+TGG | 0.329927 | 4.4:+79219378 | MS.gene50403:CDS |
| ATTTGCAGGCACAAGATTTC+AGG | 0.345983 | 4.4:+79222686 | MS.gene50403:intron |
| TGCATCTGCTCCTTCAACTT+TGG | 0.346126 | 4.4:-79221736 | None:intergenic |
| ATACGTTCAAGAAAAGCTAT+TGG | 0.353729 | 4.4:-79221549 | None:intergenic |
| GCTTGGCCTTCTGGAATTGA+TGG | 0.369375 | 4.4:-79223999 | None:intergenic |
| GCAAGTTTGCTAACTTCCTC+TGG | 0.381827 | 4.4:-79221775 | None:intergenic |
| ATGGAAGTTTGTGTTGAATT+CGG | 0.406087 | 4.4:-79223980 | None:intergenic |
| AACTGAGAACCTTCGCTCTC+AGG | 0.426253 | 4.4:+79222110 | MS.gene50403:CDS |
| CCAAGTGAAGACTAAGGTTC+AGG | 0.432712 | 4.4:+79219347 | MS.gene50403:CDS |
| GGCACAAGATTTCAGGCAGC+AGG | 0.435566 | 4.4:+79222693 | MS.gene50403:intron |
| AACGAACTCGGATTGGTGCT+TGG | 0.459219 | 4.4:-79224016 | None:intergenic |
| TGAAGTCAAAGGAGTTATGA+TGG | 0.459537 | 4.4:+79221819 | MS.gene50403:CDS |
| AGTTCGTTACAAACTCTAAT+CGG | 0.467303 | 4.4:+79224031 | MS.gene50403:CDS |
| GTTATGTGCAGGTTATTGAC+AGG | 0.472767 | 4.4:+79222058 | MS.gene50403:intron |
| GTGAAACTGAAACCATGAAC+AGG | 0.479504 | 4.4:-79219390 | None:intergenic |
| AGTCCTTACCTTAGTGCTAC+TGG | 0.483805 | 4.4:-79219430 | None:intergenic |
| AGCTTACTGTGTTGTGGCAG+TGG | 0.485476 | 4.4:+79221506 | MS.gene50403:CDS |
| CCTGAACCTTAGTCTTCACT+TGG | 0.497432 | 4.4:-79219347 | None:intergenic |
| AAAGTCTTAACAAAGAATTT+GGG | 0.498770 | 4.4:+79221628 | MS.gene50403:CDS |
| TGACAGGGGAGAGAAGATTG+AGG | 0.506422 | 4.4:+79222074 | MS.gene50403:CDS |
| ATGCATTAGACCAAAGTTGA+AGG | 0.514320 | 4.4:+79221726 | MS.gene50403:intron |
| AGTTTGTAACGAACTCGGAT+TGG | 0.522747 | 4.4:-79224023 | None:intergenic |
| CGAAGTGTAATCCAAAATTG+AGG | 0.532486 | 4.4:-79224136 | None:intergenic |
| GATGTTCCAAGTGAAGACTA+AGG | 0.537339 | 4.4:+79219341 | None:intergenic |
| TTTAATAAAAGATATGGTGG+AGG | 0.542291 | 4.4:+79221582 | MS.gene50403:CDS |
| ACGAAAGCCAGAAGTACAAA+CGG | 0.554595 | 4.4:+79224097 | MS.gene50403:CDS |
| GCCAGAAGTGCGAAAGGGAA+AGG | 0.562358 | 4.4:+79224072 | MS.gene50403:CDS |
| GGCAGCAGGGAACCCAGTTG+AGG | 0.565308 | 4.4:+79222707 | MS.gene50403:CDS |
| TGAGATAACCAGTAGCACTA+AGG | 0.570710 | 4.4:+79219422 | MS.gene50403:CDS |
| ATTAGAGTTTGTAACGAACT+CGG | 0.571594 | 4.4:-79224028 | None:intergenic |
| ACGAAAGCCAGAAGTGCGAA+AGG | 0.573824 | 4.4:+79224066 | MS.gene50403:CDS |
| CGAAAGCCAGAAGTGCGAAA+GGG | 0.579142 | 4.4:+79224067 | MS.gene50403:CDS |
| GCTCAAGTTTCTGAAGTCAA+AGG | 0.586109 | 4.4:+79221808 | MS.gene50403:CDS |
| CCACATCTTTCTCCTCAACT+GGG | 0.594648 | 4.4:-79222719 | None:intergenic |
| GCACAAGATTTCAGGCAGCA+GGG | 0.625497 | 4.4:+79222694 | MS.gene50403:CDS |
| TTATGTGCAGGTTATTGACA+GGG | 0.632196 | 4.4:+79222059 | MS.gene50403:intron |
| GTTGTGGCAGTGGAGTCTGT+TGG | 0.632770 | 4.4:+79221516 | MS.gene50403:CDS |
| AGGGTCGAACCTGAGAGCGA+AGG | 0.664624 | 4.4:-79222119 | None:intergenic |
| AAACTTCCATCAATTCCAGA+AGG | 0.668362 | 4.4:+79223993 | MS.gene50403:CDS |
| ATATTGTGTGGAACATCCAG+AGG | 0.668552 | 4.4:+79221759 | MS.gene50403:CDS |
| CCCAGTTGAGGAGAAAGATG+TGG | 0.669727 | 4.4:+79222719 | MS.gene50403:CDS |
| GGAGCAGATGCAATATTGTG+TGG | 0.680494 | 4.4:+79221747 | MS.gene50403:CDS |
| TATGTGCAGGTTATTGACAG+GGG | 0.690586 | 4.4:+79222060 | MS.gene50403:intron |
| TATGATGGAAAATATCGACA+AGG | 0.735916 | 4.4:+79221834 | MS.gene50403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAAAAAAAACAAATAAA+AGG | + | chr4.4:79220155-79220174 | MS.gene50403:intron | 10.0% |
| !! | TAAAAATAAAATATGAGTTT+AGG | + | chr4.4:79221048-79221067 | MS.gene50403:intron | 10.0% |
| !! | TTAATTCATAAACAAATAAA+AGG | + | chr4.4:79220125-79220144 | MS.gene50403:intron | 10.0% |
| !! | TTATATATGTAAATTGAAAT+AGG | + | chr4.4:79222189-79222208 | MS.gene50403:intron | 10.0% |
| !!! | AAATGCAATTTTTTTTAAAA+GGG | - | chr4.4:79223187-79223206 | None:intergenic | 10.0% |
| !!! | CTTTTATTTGTTTTTTTTTT+TGG | - | chr4.4:79220157-79220176 | None:intergenic | 10.0% |
| !!! | TTATCTGTTATTTATTATTT+TGG | + | chr4.4:79222569-79222588 | MS.gene50403:intron | 10.0% |
| !! | AAAAAAAACAAATAAAAGGA+TGG | + | chr4.4:79220159-79220178 | MS.gene50403:intron | 15.0% |
| !! | AAAAACGAACAATAAAATTA+AGG | - | chr4.4:79222142-79222161 | None:intergenic | 15.0% |
| !! | AAAACGAACAATAAAATTAA+GGG | - | chr4.4:79222141-79222160 | None:intergenic | 15.0% |
| !! | AAAATCATAAATTTGAAGAT+AGG | - | chr4.4:79221386-79221405 | None:intergenic | 15.0% |
| !! | AAATCATAAATTTGAAGATA+GGG | - | chr4.4:79221385-79221404 | None:intergenic | 15.0% |
| !! | AACGATTAAAAATAACAAAA+CGG | - | chr4.4:79223480-79223499 | None:intergenic | 15.0% |
| !! | ATTTACATATATAAAACTGT+TGG | - | chr4.4:79222183-79222202 | None:intergenic | 15.0% |
| !! | CATACAATATTCATAATTAA+TGG | - | chr4.4:79222626-79222645 | None:intergenic | 15.0% |
| !! | TAGATTTAATTAATGCTTAA+TGG | + | chr4.4:79220960-79220979 | MS.gene50403:intron | 15.0% |
| !! | TTAATTATGAATATTGTATG+AGG | + | chr4.4:79222626-79222645 | MS.gene50403:intron | 15.0% |
| !!! | ATGTATATAATATTTAGTTC+TGG | + | chr4.4:79222252-79222271 | MS.gene50403:intron | 15.0% |
| !!! | ATTTTTTTTAAAAGGGATTT+TGG | - | chr4.4:79223180-79223199 | None:intergenic | 15.0% |
| !!! | CAAATGCAATTTTTTTTAAA+AGG | - | chr4.4:79223188-79223207 | None:intergenic | 15.0% |
| !!! | GAATTTCTTTTAAAATCATT+TGG | + | chr4.4:79222012-79222031 | MS.gene50403:intron | 15.0% |
| !!! | GATGATTTTAATAAAAGATA+TGG | + | chr4.4:79221576-79221595 | MS.gene50403:CDS | 15.0% |
| !! | AAAAAACTTAACACTAATGA+AGG | - | chr4.4:79220086-79220105 | None:intergenic | 20.0% |
| !! | AAAAGTCTTAACAAAGAATT+TGG | + | chr4.4:79221627-79221646 | MS.gene50403:CDS | 20.0% |
| !! | AAAGTCTTAACAAAGAATTT+GGG | + | chr4.4:79221628-79221647 | MS.gene50403:CDS | 20.0% |
| !! | AATTGCAATCTAACTTTATT+TGG | + | chr4.4:79219536-79219555 | MS.gene50403:intron | 20.0% |
| !! | ATTGAAAGAAAGTTTAACAT+GGG | - | chr4.4:79223095-79223114 | None:intergenic | 20.0% |
| !! | CTGCAAAAAATTGAAATAAA+AGG | - | chr4.4:79223587-79223606 | None:intergenic | 20.0% |
| !! | TTTCTCGAATAAACTTAATA+CGG | + | chr4.4:79220277-79220296 | MS.gene50403:intron | 20.0% |
| !!! | ACTCAAATGCAATTTTAAAA+TGG | - | chr4.4:79223348-79223367 | None:intergenic | 20.0% |
| !!! | ATCCAAAACTTTAAAACATT+GGG | - | chr4.4:79222380-79222399 | None:intergenic | 20.0% |
| !!! | ATGATTTTAAATGCGATTTT+TGG | - | chr4.4:79223033-79223052 | None:intergenic | 20.0% |
| !!! | GATTTTAATAAAAGATATGG+TGG | + | chr4.4:79221579-79221598 | MS.gene50403:CDS | 20.0% |
| !!! | GATTTTTTGGTTTTTTTTGA+TGG | - | chr4.4:79223811-79223830 | None:intergenic | 20.0% |
| !!! | TGGTTTATTTTTTCATTAGT+TGG | + | chr4.4:79219470-79219489 | MS.gene50403:intron | 20.0% |
| !!! | TTTAAAAGAAATTCTAGAGT+TGG | - | chr4.4:79222006-79222025 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTCTCTATAAGC+TGG | - | chr4.4:79219850-79219869 | None:intergenic | 20.0% |
| !!! | TTTTATGAAACTGGAATTAT+TGG | - | chr4.4:79222517-79222536 | None:intergenic | 20.0% |
| ! | AACGATGACTGAATTAAAAA+AGG | - | chr4.4:79220313-79220332 | None:intergenic | 25.0% |
| ! | AAGTACCTCATTTAAGTATT+TGG | + | chr4.4:79223443-79223462 | MS.gene50403:intron | 25.0% |
| ! | ATTATAATCCAATGATGCTT+TGG | + | chr4.4:79221088-79221107 | MS.gene50403:intron | 25.0% |
| ! | ATTGAAATAGGAGAAGATTA+TGG | + | chr4.4:79222201-79222220 | MS.gene50403:intron | 25.0% |
| ! | CTAAAATGCAAAATGACAAA+AGG | - | chr4.4:79223563-79223582 | None:intergenic | 25.0% |
| ! | CTATAAAAATGCTTTCATGA+TGG | - | chr4.4:79219894-79219913 | None:intergenic | 25.0% |
| ! | CTTGACATGAAATTGAAATA+AGG | - | chr4.4:79223003-79223022 | None:intergenic | 25.0% |
| ! | GATTGAAAGAAAGTTTAACA+TGG | - | chr4.4:79223096-79223115 | None:intergenic | 25.0% |
| ! | TATTCTTAGGTCCAAAATTA+GGG | - | chr4.4:79222790-79222809 | None:intergenic | 25.0% |
| ! | TATTGGAATGTCAATTGAAA+TGG | + | chr4.4:79222658-79222677 | MS.gene50403:intron | 25.0% |
| ! | TTATTATACATGTTATGTGC+AGG | + | chr4.4:79222047-79222066 | MS.gene50403:intron | 25.0% |
| ! | TTTAATAAAAGATATGGTGG+AGG | + | chr4.4:79221582-79221601 | MS.gene50403:CDS | 25.0% |
| !! | ATTGTTTGAGTCTTTTCATT+CGG | + | chr4.4:79222966-79222985 | MS.gene50403:intron | 25.0% |
| !! | CATATATAAAACTGTTGGTT+TGG | - | chr4.4:79222178-79222197 | None:intergenic | 25.0% |
| !! | CTATTGTTATACCCTAATTT+TGG | + | chr4.4:79222776-79222795 | MS.gene50403:intron | 25.0% |
| !! | GTATCATGATTTTATGAAAC+TGG | - | chr4.4:79222526-79222545 | None:intergenic | 25.0% |
| !!! | AATGAGTTTTTGTTTAACTC+TGG | + | chr4.4:79223154-79223173 | MS.gene50403:intron | 25.0% |
| !!! | AGTTTGTTTTATTACTAGTC+TGG | - | chr4.4:79220470-79220489 | None:intergenic | 25.0% |
| !!! | ATCCCAATGTTTTAAAGTTT+TGG | + | chr4.4:79222375-79222394 | MS.gene50403:intron | 25.0% |
| !!! | ATTAAACAGAGTTTTAACAC+TGG | - | chr4.4:79223256-79223275 | None:intergenic | 25.0% |
| !!! | CAATGTTTTAAAGTTTTGGA+TGG | + | chr4.4:79222379-79222398 | MS.gene50403:intron | 25.0% |
| !!! | CATCCAAAACTTTAAAACAT+TGG | - | chr4.4:79222381-79222400 | None:intergenic | 25.0% |
| !!! | CATTTTTTTCTTATCACGAT+AGG | - | chr4.4:79220057-79220076 | None:intergenic | 25.0% |
| !!! | TAAAGTTTTGGATGGATTTA+TGG | + | chr4.4:79222387-79222406 | MS.gene50403:intron | 25.0% |
| !!! | TATGTTCATTTTGAGTTGTT+AGG | + | chr4.4:79219717-79219736 | MS.gene50403:intron | 25.0% |
| !!! | TGAATGTTCTTGAGATTTTT+TGG | - | chr4.4:79223824-79223843 | None:intergenic | 25.0% |
| !!! | TTTTAATTGTGATGATGAAG+TGG | + | chr4.4:79220818-79220837 | MS.gene50403:intron | 25.0% |
| AAACATGCTCAACAGTAAAA+AGG | - | chr4.4:79221466-79221485 | None:intergenic | 30.0% | |
| AACAAATAAAAGGATGGCTA+TGG | + | chr4.4:79220165-79220184 | MS.gene50403:intron | 30.0% | |
| AATCACAGCAAAATAAGCTA+AGG | - | chr4.4:79222435-79222454 | None:intergenic | 30.0% | |
| ACAAATTATAATAGTCCCAG+TGG | - | chr4.4:79219917-79219936 | None:intergenic | 30.0% | |
| ACCACTAACAGAATTATCAT+GGG | + | chr4.4:79220521-79220540 | MS.gene50403:intron | 30.0% | |
| ACGAACCAAATACTTAAATG+AGG | - | chr4.4:79223451-79223470 | None:intergenic | 30.0% | |
| AGTTCGTTACAAACTCTAAT+CGG | + | chr4.4:79224031-79224050 | MS.gene50403:CDS | 30.0% | |
| ATACGTTCAAGAAAAGCTAT+TGG | - | chr4.4:79221552-79221571 | None:intergenic | 30.0% | |
| ATGAATTAATTGTCAGCAGT+TGG | + | chr4.4:79221000-79221019 | MS.gene50403:intron | 30.0% | |
| ATGATGTTGAACAGAATCAA+TGG | - | chr4.4:79223712-79223731 | None:intergenic | 30.0% | |
| ATGGAAGTTTGTGTTGAATT+CGG | - | chr4.4:79223983-79224002 | None:intergenic | 30.0% | |
| ATTAGAGTTTGTAACGAACT+CGG | - | chr4.4:79224031-79224050 | None:intergenic | 30.0% | |
| CATAAATTTGAAGATAGGGA+GGG | - | chr4.4:79221381-79221400 | None:intergenic | 30.0% | |
| CATGATACTCTAGCATTAAT+GGG | + | chr4.4:79222538-79222557 | MS.gene50403:intron | 30.0% | |
| CTTCTATTCATTGTTCATGT+AGG | - | chr4.4:79220650-79220669 | None:intergenic | 30.0% | |
| GAAATGCAAGAAAAGAAGAA+TGG | - | chr4.4:79222819-79222838 | None:intergenic | 30.0% | |
| GAGGGTAAGTGTTAAAATTA+TGG | - | chr4.4:79221363-79221382 | None:intergenic | 30.0% | |
| GATGACTGAATTAAAAAAGG+AGG | - | chr4.4:79220310-79220329 | None:intergenic | 30.0% | |
| GATTAATTTCAACTACGCAA+AGG | - | chr4.4:79220383-79220402 | None:intergenic | 30.0% | |
| GTATGAGGATTGTGAATTAT+TGG | + | chr4.4:79222641-79222660 | MS.gene50403:intron | 30.0% | |
| GTATTCTTAGGTCCAAAATT+AGG | - | chr4.4:79222791-79222810 | None:intergenic | 30.0% | |
| GTGATTCTTACTTGCTTAAA+TGG | + | chr4.4:79221328-79221347 | MS.gene50403:intron | 30.0% | |
| TCATAAATTTGAAGATAGGG+AGG | - | chr4.4:79221382-79221401 | None:intergenic | 30.0% | |
| TCATGATACTCTAGCATTAA+TGG | + | chr4.4:79222537-79222556 | MS.gene50403:intron | 30.0% | |
| TTACTTGCTTAAATGGCTTA+TGG | + | chr4.4:79221335-79221354 | MS.gene50403:intron | 30.0% | |
| TTATGGACAGAGTTTGTATT+TGG | + | chr4.4:79222218-79222237 | MS.gene50403:intron | 30.0% | |
| TTGAAATGGTATTCATTTGC+AGG | + | chr4.4:79222672-79222691 | MS.gene50403:intron | 30.0% | |
| TTTATTTGGAAGAAGTAGTG+TGG | + | chr4.4:79219550-79219569 | MS.gene50403:intron | 30.0% | |
| ! | AAAAATCTCCAAAGCATCAT+TGG | - | chr4.4:79221099-79221118 | None:intergenic | 30.0% |
| ! | ACTGGTTATCTCAGAAATTT+TGG | - | chr4.4:79219415-79219434 | None:intergenic | 30.0% |
| ! | AGCTTTTCTTGAACGTATTA+AGG | + | chr4.4:79221554-79221573 | MS.gene50403:CDS | 30.0% |
| ! | AGGAAATTTTCAGTTGATCT+TGG | - | chr4.4:79220630-79220649 | None:intergenic | 30.0% |
| ! | TATGATGGAAAATATCGACA+AGG | + | chr4.4:79221834-79221853 | MS.gene50403:CDS | 30.0% |
| ! | TTGTTATTCCACCTAGTATT+AGG | - | chr4.4:79220924-79220943 | None:intergenic | 30.0% |
| !! | AAAGCATTTTTATAGCCACT+GGG | + | chr4.4:79219899-79219918 | MS.gene50403:intron | 30.0% |
| !! | ATGGTATTTTGAGCAATGTA+TGG | + | chr4.4:79220880-79220899 | MS.gene50403:intron | 30.0% |
| !! | GTTTGTTATCTACATGTCAT+TGG | + | chr4.4:79221934-79221953 | MS.gene50403:intron | 30.0% |
| !! | TGGTATTTTGAGCAATGTAT+GGG | + | chr4.4:79220881-79220900 | MS.gene50403:intron | 30.0% |
| !! | TTTAAATGCGATTTTTGGAG+AGG | - | chr4.4:79223028-79223047 | None:intergenic | 30.0% |
| !!! | CTAAAATGAGTTTTGAATGC+AGG | - | chr4.4:79222937-79222956 | None:intergenic | 30.0% |
| !!! | GATGTTGGTTTTACAAAAAC+AGG | + | chr4.4:79220711-79220730 | MS.gene50403:intron | 30.0% |
| !!! | TCATTTTGAGTTGTTAGGTT+TGG | + | chr4.4:79219722-79219741 | MS.gene50403:intron | 30.0% |
| AAAAGTAGACACTGTGTCTT+TGG | + | chr4.4:79219956-79219975 | MS.gene50403:intron | 35.0% | |
| AAACTTCCATCAATTCCAGA+AGG | + | chr4.4:79223993-79224012 | MS.gene50403:CDS | 35.0% | |
| AAATGACTAAAATGCCCCTA+GGG | - | chr4.4:79223233-79223252 | None:intergenic | 35.0% | |
| AAATGACTTAAATGCCCCTA+GGG | - | chr4.4:79223072-79223091 | None:intergenic | 35.0% | |
| ACTCGCAAAATTCATGAGAA+GGG | + | chr4.4:79222897-79222916 | MS.gene50403:intron | 35.0% | |
| AGAATGGAGCTAGTATTCTT+AGG | - | chr4.4:79222803-79222822 | None:intergenic | 35.0% | |
| ATGCATTAGACCAAAGTTGA+AGG | + | chr4.4:79221726-79221745 | MS.gene50403:intron | 35.0% | |
| CAAAGAATGAAACACTCACA+AGG | - | chr4.4:79220551-79220570 | None:intergenic | 35.0% | |
| CACCACTAACAGAATTATCA+TGG | + | chr4.4:79220520-79220539 | MS.gene50403:intron | 35.0% | |
| CCACTAACAGAATTATCATG+GGG | + | chr4.4:79220522-79220541 | MS.gene50403:intron | 35.0% | |
| CGAAGTGTAATCCAAAATTG+AGG | - | chr4.4:79224139-79224158 | None:intergenic | 35.0% | |
| GAAACTGGAATTATTGGACT+TGG | - | chr4.4:79222511-79222530 | None:intergenic | 35.0% | |
| GACTTGTAACTAACTCTCTT+TGG | - | chr4.4:79223616-79223635 | None:intergenic | 35.0% | |
| GTGATCAATTCGAACGAATT+TGG | - | chr4.4:79223932-79223951 | None:intergenic | 35.0% | |
| TACTCGCAAAATTCATGAGA+AGG | + | chr4.4:79222896-79222915 | MS.gene50403:intron | 35.0% | |
| TGAAGTCAAAGGAGTTATGA+TGG | + | chr4.4:79221819-79221838 | MS.gene50403:CDS | 35.0% | |
| TGACAAAGACATTCTTGCAT+TGG | + | chr4.4:79219511-79219530 | MS.gene50403:intron | 35.0% | |
| TGAGATAGTTACTTGGATGT+TGG | + | chr4.4:79220696-79220715 | MS.gene50403:intron | 35.0% | |
| TGAGCATGTTTCATGATTAG+TGG | + | chr4.4:79221475-79221494 | MS.gene50403:intron | 35.0% | |
| TTATGTGCAGGTTATTGACA+GGG | + | chr4.4:79222059-79222078 | MS.gene50403:intron | 35.0% | |
| TTGAATGTGAGATGCTTAGA+AGG | + | chr4.4:79219787-79219806 | MS.gene50403:intron | 35.0% | |
| TTTATGGTGTCCAAATCTCT+TGG | + | chr4.4:79222403-79222422 | MS.gene50403:intron | 35.0% | |
| ! | ACTGGTTCAATTGAAAGAGT+GGG | + | chr4.4:79219755-79219774 | MS.gene50403:intron | 35.0% |
| ! | ATACTCTAGCATTAATGGGT+TGG | + | chr4.4:79222542-79222561 | MS.gene50403:intron | 35.0% |
| ! | ATGAGAATGTTGATTGAGAG+TGG | + | chr4.4:79219581-79219600 | MS.gene50403:intron | 35.0% |
| ! | CAACATCTGAGATAGTTACT+TGG | + | chr4.4:79220689-79220708 | MS.gene50403:intron | 35.0% |
| ! | GAACACAAAAGCCTCAATTT+TGG | + | chr4.4:79224125-79224144 | MS.gene50403:CDS | 35.0% |
| ! | GATGATTCTGAGAAGATTGA+TGG | - | chr4.4:79223899-79223918 | None:intergenic | 35.0% |
| ! | GGTCATTTCACACGAAATTT+TGG | + | chr4.4:79223402-79223421 | MS.gene50403:intron | 35.0% |
| ! | GTAACTTTATTTGAGCTCCA+TGG | + | chr4.4:79219663-79219682 | MS.gene50403:intron | 35.0% |
| !! | AAGATTGATGGATTAGGGTT+TGG | - | chr4.4:79223887-79223906 | None:intergenic | 35.0% |
| !! | CTGAGAAGATTGATGGATTA+GGG | - | chr4.4:79223892-79223911 | None:intergenic | 35.0% |
| !! | TCTGAGAAGATTGATGGATT+AGG | - | chr4.4:79223893-79223912 | None:intergenic | 35.0% |
| !!! | AAGGACTACGGTTTTTTAGT+TGG | + | chr4.4:79219446-79219465 | MS.gene50403:intron | 35.0% |
| !!! | ACTACGGTTTTTTAGTTGGT+TGG | + | chr4.4:79219450-79219469 | MS.gene50403:intron | 35.0% |
| !!! | GAAAGCATTTTTATAGCCAC+TGG | + | chr4.4:79219898-79219917 | MS.gene50403:intron | 35.0% |
| AAACCCATTGAAATGTCCCA+GGG | - | chr4.4:79223133-79223152 | None:intergenic | 40.0% | |
| AATGACTAAAATGCCCCTAG+GGG | - | chr4.4:79223232-79223251 | None:intergenic | 40.0% | |
| AATGACTTAAATGCCCCTAG+GGG | - | chr4.4:79223071-79223090 | None:intergenic | 40.0% | |
| ACTCACACTTGAACCTAACA+AGG | - | chr4.4:79222297-79222316 | None:intergenic | 40.0% | |
| AGCAGTTTGATTCCTGTTCA+TGG | + | chr4.4:79219378-79219397 | MS.gene50403:CDS | 40.0% | |
| AGTTTGTAACGAACTCGGAT+TGG | - | chr4.4:79224026-79224045 | None:intergenic | 40.0% | |
| ATATTGTGTGGAACATCCAG+AGG | + | chr4.4:79221759-79221778 | MS.gene50403:CDS | 40.0% | |
| ATCCTTGAGAAAATTGTCCC+TGG | + | chr4.4:79223113-79223132 | MS.gene50403:intron | 40.0% | |
| ATGGCTATGGTCACTATGTT+TGG | + | chr4.4:79220178-79220197 | MS.gene50403:intron | 40.0% | |
| ATTTGCAGGCACAAGATTTC+AGG | + | chr4.4:79222686-79222705 | MS.gene50403:intron | 40.0% | |
| CAAACTTGCCTAATACTAGG+TGG | + | chr4.4:79220913-79220932 | MS.gene50403:intron | 40.0% | |
| CACCTAGTATTAGGCAAGTT+TGG | - | chr4.4:79220915-79220934 | None:intergenic | 40.0% | |
| CAGCTATAAAAGCCAACTCA+TGG | + | chr4.4:79223680-79223699 | MS.gene50403:intron | 40.0% | |
| CCCCATGATAATTCTGTTAG+TGG | - | chr4.4:79220525-79220544 | None:intergenic | 40.0% | |
| CCTAATATTCAAGCCAACCA+TGG | - | chr4.4:79219683-79219702 | None:intergenic | 40.0% | |
| CTTTCTCTCTCTACTCTTCA+CGG | + | chr4.4:79223777-79223796 | MS.gene50403:intron | 40.0% | |
| GAAATGACTAAAATGCCCCT+AGG | - | chr4.4:79223234-79223253 | None:intergenic | 40.0% | |
| GAAATGACTTAAATGCCCCT+AGG | - | chr4.4:79223073-79223092 | None:intergenic | 40.0% | |
| GTCCAAACTTGCCTAATACT+AGG | + | chr4.4:79220910-79220929 | MS.gene50403:intron | 40.0% | |
| GTGAAACTGAAACCATGAAC+AGG | - | chr4.4:79219393-79219412 | None:intergenic | 40.0% | |
| GTTATGTGCAGGTTATTGAC+AGG | + | chr4.4:79222058-79222077 | MS.gene50403:intron | 40.0% | |
| TAAAAGCCAACTCATGGTCA+AGG | + | chr4.4:79223686-79223705 | MS.gene50403:intron | 40.0% | |
| TAACCAGTAGCACTAAGGTA+AGG | + | chr4.4:79219427-79219446 | MS.gene50403:intron | 40.0% | |
| TAATTGTCAGCAGTTGGCTA+AGG | + | chr4.4:79221006-79221025 | MS.gene50403:intron | 40.0% | |
| TAGCACTAAGGTAAGGACTA+CGG | + | chr4.4:79219434-79219453 | MS.gene50403:intron | 40.0% | |
| TAGCTGATGACTGGGATAAT+TGG | - | chr4.4:79223666-79223685 | None:intergenic | 40.0% | |
| TATGTGCAGGTTATTGACAG+GGG | + | chr4.4:79222060-79222079 | MS.gene50403:intron | 40.0% | |
| TCCTTGAGAAAATTGTCCCT+GGG | + | chr4.4:79223114-79223133 | MS.gene50403:intron | 40.0% | |
| TCTTGATCCGTTTGTACTTC+TGG | - | chr4.4:79224107-79224126 | None:intergenic | 40.0% | |
| TGAGATAACCAGTAGCACTA+AGG | + | chr4.4:79219422-79219441 | MS.gene50403:CDS | 40.0% | |
| TTAATGCCACCATCCAACAA+TGG | - | chr4.4:79220855-79220874 | None:intergenic | 40.0% | |
| TTGAGCAATGTATGGGTCAA+TGG | + | chr4.4:79220888-79220907 | MS.gene50403:intron | 40.0% | |
| TTGAGTCAATTTAGCCCCTA+GGG | + | chr4.4:79223054-79223073 | MS.gene50403:intron | 40.0% | |
| TTTGAGTCAATTTAGCCCCT+AGG | + | chr4.4:79223053-79223072 | MS.gene50403:intron | 40.0% | |
| ! | AAGGCATCAACCAAGAGATT+TGG | - | chr4.4:79222416-79222435 | None:intergenic | 40.0% |
| ! | ACGAAAGCCAGAAGTACAAA+CGG | + | chr4.4:79224097-79224116 | MS.gene50403:CDS | 40.0% |
| ! | CTTTATTTGAGCTCCATGGT+TGG | + | chr4.4:79219667-79219686 | MS.gene50403:intron | 40.0% |
| ! | GGCTTTTATAGCTGATGACT+GGG | - | chr4.4:79223674-79223693 | None:intergenic | 40.0% |
| ! | TGGCTTTTATAGCTGATGAC+TGG | - | chr4.4:79223675-79223694 | None:intergenic | 40.0% |
| ! | TTTTGCAGCTTACTGTGTTG+TGG | + | chr4.4:79221500-79221519 | MS.gene50403:CDS | 40.0% |
| !! | AGAGAAGATTGAGGTTTTGG+TGG | + | chr4.4:79222083-79222102 | MS.gene50403:CDS | 40.0% |
| !! | CACTGGTTCAATTGAAAGAG+TGG | + | chr4.4:79219754-79219773 | MS.gene50403:intron | 40.0% |
| !! | CCATGGTTGGCTTGAATATT+AGG | + | chr4.4:79219680-79219699 | MS.gene50403:intron | 40.0% |
| !! | GCTCAAGTTTCTGAAGTCAA+AGG | + | chr4.4:79221808-79221827 | MS.gene50403:CDS | 40.0% |
| !! | GGAATCTGTTTCTGCTGATT+TGG | - | chr4.4:79223755-79223774 | None:intergenic | 40.0% |
| !! | GGTTGGCTTGAATATTAGGA+GGG | + | chr4.4:79219684-79219703 | MS.gene50403:intron | 40.0% |
| !! | TGGTTGGCTTGAATATTAGG+AGG | + | chr4.4:79219683-79219702 | MS.gene50403:intron | 40.0% |
| !! | TTCTGGCTTTCGTATTCTTC+TGG | - | chr4.4:79224059-79224078 | None:intergenic | 40.0% |
| AAATGACCAAAATGCCCCTG+GGG | - | chr4.4:79223390-79223409 | None:intergenic | 45.0% | |
| ACCACATCTTTCTCCTCAAC+TGG | - | chr4.4:79222723-79222742 | None:intergenic | 45.0% | |
| ACTCGAATGACGTCCTTGTT+AGG | + | chr4.4:79222281-79222300 | MS.gene50403:intron | 45.0% | |
| AGGTTTGGAAAAGCTAGCAC+TGG | + | chr4.4:79219737-79219756 | MS.gene50403:intron | 45.0% | |
| AGTCCTTACCTTAGTGCTAC+TGG | - | chr4.4:79219433-79219452 | None:intergenic | 45.0% | |
| AGTTACAAGTCCAGTCCACA+TGG | + | chr4.4:79223625-79223644 | MS.gene50403:intron | 45.0% | |
| CAAACCCATTGAAATGTCCC+AGG | - | chr4.4:79223134-79223153 | None:intergenic | 45.0% | |
| CCAAGTGAAGACTAAGGTTC+AGG | + | chr4.4:79219347-79219366 | MS.gene50403:CDS | 45.0% | |
| CCACATCTTTCTCCTCAACT+GGG | - | chr4.4:79222722-79222741 | None:intergenic | 45.0% | |
| CGTGAAGAGTAGAGAGAGAA+AGG | - | chr4.4:79223779-79223798 | None:intergenic | 45.0% | |
| GAAATGACCAAAATGCCCCT+GGG | - | chr4.4:79223391-79223410 | None:intergenic | 45.0% | |
| GAAGAGTAGAGAGAGAAAGG+TGG | - | chr4.4:79223776-79223795 | None:intergenic | 45.0% | |
| GGAGCAGATGCAATATTGTG+TGG | + | chr4.4:79221747-79221766 | MS.gene50403:CDS | 45.0% | |
| TCTGGTGTTCGTGTATGGTT+TGG | + | chr4.4:79221966-79221985 | MS.gene50403:intron | 45.0% | |
| TGAAATGACCAAAATGCCCC+TGG | - | chr4.4:79223392-79223411 | None:intergenic | 45.0% | |
| TGAGTCAATTTAGCCCCTAG+GGG | + | chr4.4:79223055-79223074 | MS.gene50403:intron | 45.0% | |
| TGCATCTGCTCCTTCAACTT+TGG | - | chr4.4:79221739-79221758 | None:intergenic | 45.0% | |
| TGTCATTGGCATATCGTGTC+TGG | + | chr4.4:79221948-79221967 | MS.gene50403:intron | 45.0% | |
| TGTCCCTGGGACATTTCAAT+GGG | + | chr4.4:79223127-79223146 | MS.gene50403:intron | 45.0% | |
| TTGAGTCAGTTTAGCCCCTA+GGG | + | chr4.4:79223215-79223234 | MS.gene50403:intron | 45.0% | |
| TTGTCCCTGGGACATTTCAA+TGG | + | chr4.4:79223126-79223145 | MS.gene50403:intron | 45.0% | |
| TTTGAGTCAGTTTAGCCCCT+AGG | + | chr4.4:79223214-79223233 | MS.gene50403:intron | 45.0% | |
| ! | CCTGAACCTTAGTCTTCACT+TGG | - | chr4.4:79219350-79219369 | None:intergenic | 45.0% |
| ! | GATGGTGGCATTAATCGTGA+TGG | + | chr4.4:79220861-79220880 | MS.gene50403:intron | 45.0% |
| ! | GGGAGAGAAGATTGAGGTTT+TGG | + | chr4.4:79222080-79222099 | MS.gene50403:CDS | 45.0% |
| ! | TCCCAGGGACAATTTTCTCA+AGG | - | chr4.4:79223118-79223137 | None:intergenic | 45.0% |
| !! | CACGAAATTTTGGCAGAGAG+AGG | + | chr4.4:79223412-79223431 | MS.gene50403:intron | 45.0% |
| !! | GCAAGTTTGCTAACTTCCTC+TGG | - | chr4.4:79221778-79221797 | None:intergenic | 45.0% |
| !! | GGATTAGGGTTTGGTGATGA+TGG | - | chr4.4:79223878-79223897 | None:intergenic | 45.0% |
| !! | TCGAGTCATTTTAGTCCCCA+GGG | + | chr4.4:79223372-79223391 | MS.gene50403:intron | 45.0% |
| !! | TTCGAGTCATTTTAGTCCCC+AGG | + | chr4.4:79223371-79223390 | MS.gene50403:intron | 45.0% |
| !! | AAAATTTAAATATATGTATA+AGG | + | chr4.4:79219860-79219879 | MS.gene50403:intron | 5.0% |
| !! | AAATGTAATTAAAATAAAAT+TGG | - | chr4.4:79223536-79223555 | None:intergenic | 5.0% |
| !!! | ATCTATATATATTTTTTTTA+TGG | + | chr4.4:79221415-79221434 | MS.gene50403:intron | 5.0% |
| AACTGAGAACCTTCGCTCTC+AGG | + | chr4.4:79222110-79222129 | MS.gene50403:CDS | 50.0% | |
| ACCAATGAGAGACTGCCATG+TGG | - | chr4.4:79223643-79223662 | None:intergenic | 50.0% | |
| AGCTTACTGTGTTGTGGCAG+TGG | + | chr4.4:79221506-79221525 | MS.gene50403:CDS | 50.0% | |
| CATCCAACAATGGAAGCGGA+CGG | - | chr4.4:79220845-79220864 | None:intergenic | 50.0% | |
| CCACCATCCAACAATGGAAG+CGG | - | chr4.4:79220849-79220868 | None:intergenic | 50.0% | |
| CCCAGTTGAGGAGAAAGATG+TGG | + | chr4.4:79222719-79222738 | MS.gene50403:CDS | 50.0% | |
| GCACAAGATTTCAGGCAGCA+GGG | + | chr4.4:79222694-79222713 | MS.gene50403:CDS | 50.0% | |
| TCCACATGGCAGTCTCTCAT+TGG | + | chr4.4:79223639-79223658 | MS.gene50403:intron | 50.0% | |
| TCCTTTCCCTTTCGCACTTC+TGG | - | chr4.4:79224076-79224095 | None:intergenic | 50.0% | |
| TCGTGTCTGGTGTTCGTGTA+TGG | + | chr4.4:79221961-79221980 | MS.gene50403:intron | 50.0% | |
| TGACAGGGGAGAGAAGATTG+AGG | + | chr4.4:79222074-79222093 | MS.gene50403:CDS | 50.0% | |
| TGAGTCAGTTTAGCCCCTAG+GGG | + | chr4.4:79223216-79223235 | MS.gene50403:intron | 50.0% | |
| ! | AAACGCACGGGCGGATTTAA+TGG | - | chr4.4:79220436-79220455 | None:intergenic | 50.0% |
| ! | ACGAAAGCCAGAAGTGCGAA+AGG | + | chr4.4:79224066-79224085 | MS.gene50403:CDS | 50.0% |
| ! | CAATGGCCTTGACCATGAGT+TGG | - | chr4.4:79223695-79223714 | None:intergenic | 50.0% |
| ! | CGAAAGCCAGAAGTGCGAAA+GGG | + | chr4.4:79224067-79224086 | MS.gene50403:CDS | 50.0% |
| !! | AACGAACTCGGATTGGTGCT+TGG | - | chr4.4:79224019-79224038 | None:intergenic | 50.0% |
| !! | CGAGTCATTTTAGTCCCCAG+GGG | + | chr4.4:79223373-79223392 | MS.gene50403:intron | 50.0% |
| !! | GCTTGGCCTTCTGGAATTGA+TGG | - | chr4.4:79224002-79224021 | None:intergenic | 50.0% |
| !!! | TTTAGTCCCCAGGGGCATTT+TGG | + | chr4.4:79223381-79223400 | MS.gene50403:intron | 50.0% |
| CCGCTTCCATTGTTGGATGG+TGG | + | chr4.4:79220846-79220865 | MS.gene50403:intron | 55.0% | |
| CGTCCGCTTCCATTGTTGGA+TGG | + | chr4.4:79220843-79220862 | MS.gene50403:intron | 55.0% | |
| GGCACAAGATTTCAGGCAGC+AGG | + | chr4.4:79222693-79222712 | MS.gene50403:intron | 55.0% | |
| GTTGTGGCAGTGGAGTCTGT+TGG | + | chr4.4:79221516-79221535 | MS.gene50403:CDS | 55.0% | |
| TGAGAGACTGCCATGTGGAC+TGG | - | chr4.4:79223638-79223657 | None:intergenic | 55.0% | |
| ! | GCCAGAAGTGCGAAAGGGAA+AGG | + | chr4.4:79224072-79224091 | MS.gene50403:CDS | 55.0% |
| AGGGTCGAACCTGAGAGCGA+AGG | - | chr4.4:79222122-79222141 | None:intergenic | 60.0% | |
| GGACCGTCCGCTTCCATTGT+TGG | + | chr4.4:79220839-79220858 | MS.gene50403:intron | 60.0% | |
| !! | CGGATTGGTGCTTGGCCTTC+TGG | - | chr4.4:79224011-79224030 | None:intergenic | 60.0% |
| GGCAGCAGGGAACCCAGTTG+AGG | + | chr4.4:79222707-79222726 | MS.gene50403:CDS | 65.0% | |
| GCACCCGTGCGCAAACGCAC+GGG | - | chr4.4:79220448-79220467 | None:intergenic | 70.0% | |
| GGCACCCGTGCGCAAACGCA+CGG | - | chr4.4:79220449-79220468 | None:intergenic | 70.0% | |
| TCCGCCCGTGCGTTTGCGCA+CGG | + | chr4.4:79220441-79220460 | MS.gene50403:intron | 70.0% | |
| CCCGTGCGCAAACGCACGGG+CGG | - | chr4.4:79220445-79220464 | None:intergenic | 75.0% | |
| CCGCCCGTGCGTTTGCGCAC+GGG | + | chr4.4:79220442-79220461 | MS.gene50403:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 79219342 | 79224179 | 79219342 | ID=MS.gene50403 |
| chr4.4 | mRNA | 79219342 | 79224179 | 79219342 | ID=MS.gene50403.t1;Parent=MS.gene50403 |
| chr4.4 | exon | 79219342 | 79219443 | 79219342 | ID=MS.gene50403.t1.exon1;Parent=MS.gene50403.t1 |
| chr4.4 | CDS | 79219342 | 79219443 | 79219342 | ID=cds.MS.gene50403.t1;Parent=MS.gene50403.t1 |
| chr4.4 | exon | 79221495 | 79221649 | 79221495 | ID=MS.gene50403.t1.exon2;Parent=MS.gene50403.t1 |
| chr4.4 | CDS | 79221495 | 79221649 | 79221495 | ID=cds.MS.gene50403.t1;Parent=MS.gene50403.t1 |
| chr4.4 | exon | 79221735 | 79221855 | 79221735 | ID=MS.gene50403.t1.exon3;Parent=MS.gene50403.t1 |
| chr4.4 | CDS | 79221735 | 79221855 | 79221735 | ID=cds.MS.gene50403.t1;Parent=MS.gene50403.t1 |
| chr4.4 | exon | 79222069 | 79222131 | 79222069 | ID=MS.gene50403.t1.exon4;Parent=MS.gene50403.t1 |
| chr4.4 | CDS | 79222069 | 79222131 | 79222069 | ID=cds.MS.gene50403.t1;Parent=MS.gene50403.t1 |
| chr4.4 | exon | 79222694 | 79222740 | 79222694 | ID=MS.gene50403.t1.exon5;Parent=MS.gene50403.t1 |
| chr4.4 | CDS | 79222694 | 79222740 | 79222694 | ID=cds.MS.gene50403.t1;Parent=MS.gene50403.t1 |
| chr4.4 | exon | 79223963 | 79224179 | 79223963 | ID=MS.gene50403.t1.exon6;Parent=MS.gene50403.t1 |
| chr4.4 | CDS | 79223963 | 79224179 | 79223963 | ID=cds.MS.gene50403.t1;Parent=MS.gene50403.t1 |
| Gene Sequence |
| Protein sequence |
