AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50630.t1 MTR_1g069960 94.631 149 2 2 1 143 1 149 4.58e-99 281
MS.gene50630.t1 MTR_7g096810 64.062 128 27 4 14 138 3 114 7.15e-42 135
MS.gene50630.t1 MTR_1g074310 50.370 135 65 2 4 138 3 135 1.40e-35 120
MS.gene50630.t1 MTR_2g438180 51.181 127 54 3 12 138 4 122 5.63e-33 113
MS.gene50630.t1 MTR_1g070070 67.532 77 22 1 10 83 5 81 1.39e-32 112
MS.gene50630.t1 MTR_1g048610 61.176 85 33 0 8 92 74 158 6.10e-32 113
MS.gene50630.t1 MTR_1g074230 77.778 63 14 0 21 83 17 79 1.51e-31 110
MS.gene50630.t1 MTR_7g096750 75.000 64 16 0 20 83 17 80 7.49e-30 105
MS.gene50630.t1 MTR_7g096700 69.565 69 21 0 20 88 17 85 1.00e-29 105
MS.gene50630.t1 MTR_1g090290 75.000 60 15 0 23 82 113 172 1.12e-29 107
MS.gene50630.t1 MTR_1g074250 66.216 74 21 2 11 83 10 80 6.65e-29 102
MS.gene50630.t1 MTR_4g088005 63.158 76 25 1 13 85 44 119 7.40e-29 102
MS.gene50630.t1 MTR_4g100420 66.176 68 23 0 23 90 157 224 1.53e-28 106
MS.gene50630.t1 MTR_2g015050 71.429 63 18 0 23 85 134 196 2.36e-28 105
MS.gene50630.t1 MTR_2g078680 49.107 112 37 4 8 100 8 118 2.88e-28 103
MS.gene50630.t1 MTR_2g015040 68.182 66 21 0 23 88 63 128 2.90e-28 102
MS.gene50630.t1 MTR_4g054360 75.862 58 14 0 23 80 124 181 7.29e-28 103
MS.gene50630.t1 MTR_4g054740 69.231 65 20 0 18 82 92 156 1.23e-27 102
MS.gene50630.t1 MTR_4g100450 71.667 60 17 0 23 82 154 213 1.38e-27 103
MS.gene50630.t1 MTR_2g105380 58.889 90 29 3 6 90 95 181 1.86e-27 104
MS.gene50630.t1 MTR_8g006840 67.188 64 21 0 18 81 120 183 9.67e-27 99.4
MS.gene50630.t1 MTR_4g078710 60.274 73 28 1 8 80 13 84 1.11e-26 99.8
MS.gene50630.t1 MTR_4g100380 72.414 58 16 0 23 80 145 202 1.82e-26 100
MS.gene50630.t1 MTR_4g054860 73.684 57 15 0 24 80 132 188 2.39e-26 100
MS.gene50630.t1 MTR_1g070045 61.972 71 27 0 9 79 52 122 3.72e-26 97.1
MS.gene50630.t1 MTR_4g086165 74.576 59 14 1 22 80 81 138 4.56e-26 97.8
MS.gene50630.t1 MTR_1g070020 60.256 78 27 1 2 79 53 126 5.65e-26 97.8
MS.gene50630.t1 MTR_1g069985 68.852 61 19 0 19 79 71 131 7.86e-26 97.4
MS.gene50630.t1 MTR_7g020980 65.217 69 23 1 23 91 51 118 9.37e-26 96.3
MS.gene50630.t1 MTR_8g006815 66.667 60 20 0 22 81 95 154 1.08e-25 96.7
MS.gene50630.t1 MTR_4g086220 75.862 58 13 1 23 80 96 152 1.17e-25 97.4
MS.gene50630.t1 MTR_7g081815 66.667 60 20 0 22 81 60 119 1.27e-25 96.7
MS.gene50630.t1 MTR_7g081795 66.667 60 20 0 22 81 59 118 1.53e-25 96.7
MS.gene50630.t1 MTR_8g022820 69.565 69 18 2 22 90 122 187 1.74e-25 99.8
MS.gene50630.t1 MTR_8g022820 69.565 69 18 2 22 90 123 188 1.74e-25 99.8
MS.gene50630.t1 MTR_8g022820 69.565 69 18 2 22 90 123 188 1.74e-25 99.8
MS.gene50630.t1 MTR_1g070015 70.175 57 17 0 23 79 84 140 1.90e-25 96.7
MS.gene50630.t1 MTR_7g021010 72.414 58 15 1 23 80 51 107 2.06e-25 95.5
MS.gene50630.t1 MTR_4g086160 74.138 58 14 1 23 80 96 152 2.13e-25 96.7
MS.gene50630.t1 MTR_7g081805 66.667 60 20 0 22 81 60 119 2.53e-25 95.9
MS.gene50630.t1 MTR_8g006825 51.765 85 30 1 8 81 70 154 2.68e-25 95.9
MS.gene50630.t1 MTR_4g086190 74.138 58 14 1 23 80 96 152 3.52e-25 96.3
MS.gene50630.t1 MTR_1g070000 58.108 74 28 1 6 79 70 140 4.01e-25 95.9
MS.gene50630.t1 MTR_7g021010 71.186 59 16 1 23 81 12 69 4.38e-25 93.6
MS.gene50630.t1 MTR_1g087920 73.333 60 15 1 23 82 77 135 5.61e-25 97.1
MS.gene50630.t1 MTR_5g085070 68.852 61 18 1 20 80 48 107 7.27e-25 96.7
MS.gene50630.t1 MTR_1g070035 65.625 64 22 0 19 82 73 136 1.14e-24 94.7
MS.gene50630.t1 MTR_5g085100 67.213 61 19 1 20 80 43 102 1.93e-24 95.5
MS.gene50630.t1 MTR_8g092460 71.186 59 16 1 22 80 144 201 2.38e-24 95.5
MS.gene50630.t1 MTR_1g040430 74.074 54 14 0 29 82 117 170 5.74e-24 92.4
MS.gene50630.t1 MTR_3g053690 71.186 59 16 1 22 80 26 83 6.08e-24 92.8
MS.gene50630.t1 MTR_2g435590 54.118 85 34 2 1 81 70 153 7.06e-24 93.6
MS.gene50630.t1 MTR_2g014340 58.667 75 28 2 6 80 4 75 9.39e-24 91.7
MS.gene50630.t1 MTR_8g006410 51.724 87 35 2 11 97 40 119 3.44e-23 90.5
MS.gene50630.t1 MTR_1g069940 74.138 58 15 0 23 80 95 152 1.56e-22 89.4
MS.gene50630.t1 MTR_1g028560 70.690 58 16 1 22 79 114 170 1.76e-22 91.3
MS.gene50630.t1 MTR_1g074370 76.667 60 14 0 23 82 73 132 2.17e-22 88.6
MS.gene50630.t1 MTR_7g096830 73.333 60 16 0 23 82 98 157 2.92e-22 89.0
MS.gene50630.t1 MTR_5g009620 53.933 89 35 3 22 110 111 193 4.04e-22 89.7
MS.gene50630.t1 MTR_7g046260 56.410 78 27 2 23 100 61 131 4.06e-22 88.2
MS.gene50630.t1 MTR_1g043350 63.889 72 26 0 11 82 70 141 4.32e-22 87.8
MS.gene50630.t1 MTR_2g101340 50.000 88 36 3 13 100 32 111 4.75e-22 87.4
MS.gene50630.t1 MTR_7g096780 77.193 57 13 0 23 79 85 141 5.71e-22 87.8
MS.gene50630.t1 MTR_1g069945 74.138 58 15 0 23 80 101 158 8.31e-22 87.8
MS.gene50630.t1 MTR_2g014300 67.241 58 18 1 23 80 15 71 8.68e-22 85.9
MS.gene50630.t1 MTR_8g069360 62.319 69 23 2 11 79 34 99 2.58e-21 88.6
MS.gene50630.t1 MTR_6g088405 55.128 78 28 2 23 100 44 114 2.77e-21 85.9
MS.gene50630.t1 MTR_7g117690 42.857 91 45 2 8 98 13 96 4.62e-21 84.0
MS.gene50630.t1 MTR_5g085125 56.338 71 30 1 18 88 11 80 1.53e-20 82.8
MS.gene50630.t1 MTR_4g035430 52.000 75 29 2 23 97 32 99 1.89e-20 83.6
MS.gene50630.t1 MTR_3g090760 63.793 58 20 1 22 79 112 168 2.68e-20 85.5
MS.gene50630.t1 MTR_3g074130 66.102 59 19 1 23 81 150 207 3.35e-20 84.7
MS.gene50630.t1 MTR_4g008860 54.430 79 35 1 20 98 5 82 3.72e-20 82.4
MS.gene50630.t1 MTR_5g032820 66.102 59 19 1 21 79 44 101 4.95e-20 84.7
MS.gene50630.t1 MTR_2g043050 56.923 65 27 1 18 82 14 77 7.40e-20 82.0
MS.gene50630.t1 MTR_5g062700 66.102 59 19 1 23 81 173 230 7.60e-20 84.3
MS.gene50630.t1 MTR_1g014820 35.443 158 73 5 11 140 14 170 9.12e-20 82.8
MS.gene50630.t1 MTR_8g013860 53.846 78 29 2 23 100 47 117 1.16e-19 81.3
MS.gene50630.t1 MTR_8g102800 63.793 58 20 1 23 80 37 93 1.20e-19 81.6
MS.gene50630.t1 MTR_1g090170 62.712 59 21 1 23 81 152 209 1.46e-19 82.8
MS.gene50630.t1 MTR_8g027465 43.011 93 42 2 11 103 27 108 1.61e-19 80.1
MS.gene50630.t1 MTR_1g090170 62.712 59 21 1 23 81 239 296 1.77e-19 83.6
MS.gene50630.t1 MTR_7g084370 61.765 68 25 1 22 89 41 107 1.84e-19 82.0
MS.gene50630.t1 MTR_3g110205 51.282 78 31 2 23 100 43 113 2.49e-19 80.1
MS.gene50630.t1 MTR_5g012910 47.368 95 42 3 7 100 11 98 2.66e-19 79.7
MS.gene50630.t1 MTR_2g043030 55.385 65 28 1 18 82 14 77 2.70e-19 80.1
MS.gene50630.t1 MTR_8g099215 63.793 58 20 1 22 79 106 162 4.68e-19 81.6
MS.gene50630.t1 MTR_4g119270 62.069 58 21 1 22 79 52 108 4.76e-19 81.6
MS.gene50630.t1 MTR_8g090350 62.712 59 21 1 23 81 113 170 5.03e-19 80.9
MS.gene50630.t1 MTR_2g090235 63.934 61 21 1 23 83 218 277 5.41e-19 82.0
MS.gene50630.t1 MTR_2g089170 59.677 62 24 1 20 81 62 122 5.95e-19 79.0
MS.gene50630.t1 MTR_1g074280 53.333 75 35 0 17 91 11 85 7.62e-19 77.0
MS.gene50630.t1 MTR_1g014780 56.250 64 27 1 18 81 33 95 8.19e-19 79.7
MS.gene50630.t1 MTR_3g102100 60.345 58 22 1 23 80 45 101 1.04e-18 77.8
MS.gene50630.t1 MTR_8g085960 42.478 113 57 3 22 127 24 135 1.55e-18 79.0
MS.gene50630.t1 MTR_1g014860 57.627 59 24 1 23 81 22 79 2.31e-18 78.2
MS.gene50630.t1 MTR_3g106290 62.295 61 22 1 20 80 5 64 2.37e-18 77.4
MS.gene50630.t1 MTR_5g075570 58.621 58 23 1 23 80 124 180 3.37e-18 79.0
MS.gene50630.t1 MTR_6g466130 53.333 75 28 2 23 97 66 133 3.65e-18 77.8
MS.gene50630.t1 MTR_2g019750 62.069 58 21 1 22 79 49 105 3.68e-18 79.0
MS.gene50630.t1 MTR_5g016750 48.684 76 38 1 14 89 16 90 4.23e-18 76.6
MS.gene50630.t1 MTR_2g043040 53.846 65 29 1 18 82 14 77 4.32e-18 77.8
MS.gene50630.t1 MTR_5g082950 57.576 66 27 1 14 79 57 121 4.86e-18 79.0
MS.gene50630.t1 MTR_1g014800 55.932 59 25 1 23 81 31 88 6.20e-18 77.0
MS.gene50630.t1 MTR_1g019110 60.345 58 22 1 23 80 44 100 7.29e-18 75.9
MS.gene50630.t1 MTR_1g101600 52.000 75 29 2 23 97 41 108 8.17e-18 76.3
MS.gene50630.t1 MTR_4g100650 60.345 58 22 1 23 80 74 130 8.62e-18 77.4
MS.gene50630.t1 MTR_1g074290 54.667 75 34 0 17 91 11 85 1.03e-17 75.1
MS.gene50630.t1 MTR_0939s0010 58.065 62 25 1 20 81 62 122 1.12e-17 75.9
MS.gene50630.t1 MTR_5g083340 61.667 60 22 1 22 81 84 142 1.18e-17 78.2
MS.gene50630.t1 MTR_7g092190 53.623 69 31 1 21 89 28 95 1.27e-17 77.4
MS.gene50630.t1 MTR_2g043020 52.308 65 30 1 18 82 14 77 1.62e-17 75.5
MS.gene50630.t1 MTR_8g023680 51.429 70 32 2 2 70 94 162 1.93e-17 77.4
MS.gene50630.t1 MTR_4g010640 57.627 59 24 1 22 80 6 63 1.94e-17 75.5
MS.gene50630.t1 MTR_4g114570 57.627 59 24 1 22 80 6 63 2.03e-17 75.5
MS.gene50630.t1 MTR_5g008470 44.944 89 37 3 14 97 61 142 2.50e-17 74.7
MS.gene50630.t1 MTR_3g098580 61.429 70 26 1 16 85 69 137 2.70e-17 75.9
MS.gene50630.t1 MTR_6g465530 52.055 73 28 2 23 95 33 98 5.08e-17 74.3
MS.gene50630.t1 MTR_3g105510 50.769 65 31 1 15 79 29 92 5.68e-17 74.7
MS.gene50630.t1 MTR_2g103700 55.932 59 25 1 22 80 6 63 7.83e-17 73.2
MS.gene50630.t1 MTR_6g465690 50.667 75 30 2 23 97 63 130 9.41e-17 74.7
MS.gene50630.t1 MTR_4g111915 53.846 65 29 1 20 84 50 113 9.86e-17 72.0
MS.gene50630.t1 MTR_5g008540 56.140 57 24 1 25 81 26 81 1.04e-16 70.9
MS.gene50630.t1 MTR_4g112490 53.846 65 29 1 20 84 50 113 1.59e-16 73.2
MS.gene50630.t1 MTR_6g466000 42.391 92 46 2 23 114 57 141 1.71e-16 73.2
MS.gene50630.t1 MTR_6g465510 52.055 73 28 2 23 95 33 98 1.83e-16 72.8
MS.gene50630.t1 MTR_3g095190 72.881 59 15 1 22 80 169 226 1.97e-16 74.7
MS.gene50630.t1 MTR_6g465850 42.391 92 46 2 23 114 63 147 3.71e-16 73.2
MS.gene50630.t1 MTR_1g074270 54.688 64 16 2 21 83 17 68 4.92e-16 69.7
MS.gene50630.t1 MTR_6g465460 52.000 75 29 2 23 97 54 121 5.02e-16 72.8
MS.gene50630.t1 MTR_5g008590 56.000 75 26 2 23 97 11 78 6.12e-16 71.2
MS.gene50630.t1 MTR_1g006660 56.410 78 27 2 23 100 47 117 6.12e-16 72.4
MS.gene50630.t1 MTR_7g085810 52.857 70 26 2 10 79 23 85 7.09e-16 72.0
MS.gene50630.t1 MTR_6g465430 50.667 75 30 2 23 97 54 121 1.22e-15 71.2
MS.gene50630.t1 MTR_6g012970 55.172 58 25 1 22 79 37 93 1.29e-15 72.8
MS.gene50630.t1 MTR_6g029180 55.172 58 25 1 22 79 32 88 1.37e-15 72.0
MS.gene50630.t1 MTR_6g465450 50.667 75 30 2 23 97 54 121 1.54e-15 71.2
MS.gene50630.t1 MTR_4g102670 51.282 78 30 3 23 100 15 84 1.81e-15 69.3
MS.gene50630.t1 MTR_6g033255 66.154 65 21 1 16 80 13 76 2.54e-15 70.1
MS.gene50630.t1 MTR_5g008550 50.667 75 30 2 23 97 21 88 2.80e-15 69.3
MS.gene50630.t1 MTR_5g083330 56.667 60 25 1 22 81 34 92 3.34e-15 70.9
MS.gene50630.t1 MTR_2g016730 55.172 58 25 1 22 79 22 78 5.33e-15 70.5
MS.gene50630.t1 MTR_6g088425 56.410 78 27 2 23 100 49 119 5.86e-15 69.3
MS.gene50630.t1 MTR_7g028925 51.389 72 30 3 11 81 16 83 7.24e-15 65.9
MS.gene50630.t1 MTR_6g465420 49.333 75 31 2 23 97 54 121 1.05e-14 69.3
MS.gene50630.t1 MTR_1g097190 60.000 50 19 1 23 72 23 71 1.06e-14 66.6
MS.gene50630.t1 MTR_5g057810 62.745 51 18 1 21 71 86 135 1.24e-14 69.3
MS.gene50630.t1 MTR_5g057647 62.745 51 18 1 21 71 86 135 1.24e-14 69.3
MS.gene50630.t1 MTR_3g056750 42.857 70 37 1 20 89 32 98 1.54e-14 65.1
MS.gene50630.t1 MTR_3g105480 52.727 55 25 1 25 79 33 86 6.76e-14 66.6
MS.gene50630.t1 MTR_7g070220 46.429 84 38 2 2 79 58 140 7.41e-14 67.8
MS.gene50630.t1 MTR_6g466020 52.542 59 27 1 23 81 43 100 8.37e-14 65.5
MS.gene50630.t1 MTR_8g032610 51.724 58 27 1 22 79 26 82 1.00e-13 66.6
MS.gene50630.t1 MTR_1g110970 44.304 79 39 3 22 99 96 170 1.09e-13 67.0
MS.gene50630.t1 MTR_7g011630 55.172 58 25 1 22 79 41 97 1.22e-13 67.0
MS.gene50630.t1 MTR_1g105400 55.102 49 21 1 22 70 114 161 2.35e-13 66.2
MS.gene50630.t1 MTR_2g085015 43.836 73 39 2 23 93 47 119 4.29e-13 64.3
MS.gene50630.t1 MTR_8g023700 58.333 48 19 1 23 70 117 163 5.22e-13 65.1
MS.gene50630.t1 MTR_3g017420 50.000 54 26 1 30 83 2 54 5.78e-13 60.5
MS.gene50630.t1 MTR_4g082345 53.448 58 26 1 22 79 47 103 6.47e-13 64.7
MS.gene50630.t1 MTR_1g098460 61.538 65 24 1 30 94 146 209 4.21e-12 62.4
MS.gene50630.t1 MTR_5g085130 55.556 72 30 2 20 91 15 84 4.40e-12 60.8
MS.gene50630.t1 MTR_5g010940 48.387 62 27 1 23 79 54 115 5.19e-12 61.2
MS.gene50630.t1 MTR_3g112440 60.345 58 22 1 23 80 39 95 5.46e-12 61.2
MS.gene50630.t1 MTR_4g102660 47.692 65 28 1 33 97 56 114 6.58e-12 60.8
MS.gene50630.t1 MTR_5g010930 48.387 62 27 1 23 79 49 110 6.76e-12 60.8
MS.gene50630.t1 MTR_6g037610 76.471 51 11 1 30 80 187 236 7.06e-12 62.0
MS.gene50630.t1 MTR_5g010910 48.387 62 27 1 23 79 49 110 8.71e-12 60.8
MS.gene50630.t1 MTR_4g048250 58.333 48 17 2 20 65 5 51 2.45e-11 57.8
MS.gene50630.t1 MTR_1g023170 58.621 58 23 1 23 80 40 96 2.48e-11 60.1
MS.gene50630.t1 MTR_5g008790 45.161 62 31 2 22 81 17 77 2.88e-11 58.2
MS.gene50630.t1 MTR_1g012470 57.627 59 24 1 22 80 6 63 4.42e-11 58.5
MS.gene50630.t1 MTR_8g010340 63.043 46 16 1 34 79 118 162 4.81e-11 59.3
MS.gene50630.t1 MTR_3g107380 57.627 59 24 1 22 80 7 64 9.27e-11 57.8
MS.gene50630.t1 MTR_3g072610 40.179 112 60 3 5 114 7 113 9.36e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50630.t1 AT3G23230 57.143 119 48 2 20 138 17 132 1.11e-36 123
MS.gene50630.t1 AT5G51190 73.438 64 17 0 19 82 68 131 2.27e-30 109
MS.gene50630.t1 AT5G43410 68.657 67 21 0 17 83 9 75 5.91e-30 105
MS.gene50630.t1 AT2G33710 63.855 83 28 2 17 99 64 144 9.32e-30 107
MS.gene50630.t1 AT2G33710 63.855 83 28 2 17 99 64 144 1.28e-29 107
MS.gene50630.t1 AT5G07580 57.647 85 33 1 8 89 95 179 2.80e-29 106
MS.gene50630.t1 AT5G61600 65.217 69 24 0 23 91 88 156 5.37e-29 106
MS.gene50630.t1 AT4G17490 76.667 60 14 0 23 82 137 196 2.06e-28 105
MS.gene50630.t1 AT5G47230 75.000 60 15 0 23 82 156 215 2.43e-28 105
MS.gene50630.t1 AT5G47220 74.138 58 15 0 23 80 117 174 2.04e-27 102
MS.gene50630.t1 AT3G23240 73.333 60 16 0 23 82 82 141 2.95e-27 101
MS.gene50630.t1 AT3G15210 67.692 65 20 1 17 81 19 82 3.55e-27 101
MS.gene50630.t1 AT1G03800 60.294 68 26 1 13 80 43 109 9.15e-27 100
MS.gene50630.t1 AT4G17500 74.138 58 15 0 23 80 148 205 9.56e-27 101
MS.gene50630.t1 AT3G23220 67.532 77 21 1 17 89 8 84 1.02e-26 97.8
MS.gene50630.t1 AT2G47520 72.881 59 15 1 23 81 50 107 1.40e-26 98.2
MS.gene50630.t1 AT2G44840 49.057 106 53 1 21 126 90 194 1.61e-26 99.8
MS.gene50630.t1 AT2G31230 62.338 77 27 1 8 82 69 145 1.93e-26 99.8
MS.gene50630.t1 AT5G13330 60.000 70 27 1 23 92 39 107 3.41e-26 98.6
MS.gene50630.t1 AT1G72360 70.492 61 17 1 22 82 24 83 1.02e-25 97.1
MS.gene50630.t1 AT1G72360 59.494 79 30 2 5 82 57 134 2.88e-25 97.1
MS.gene50630.t1 AT1G72360 70.492 61 17 1 22 82 73 132 3.85e-25 96.7
MS.gene50630.t1 AT3G16770 72.881 59 15 1 23 81 79 136 4.53e-25 96.3
MS.gene50630.t1 AT5G44210 67.213 61 19 1 20 80 30 89 9.61e-25 94.4
MS.gene50630.t1 AT4G18450 54.545 88 25 2 22 94 109 196 1.80e-24 95.9
MS.gene50630.t1 AT1G50640 63.636 66 23 1 15 80 20 84 2.24e-24 94.0
MS.gene50630.t1 AT1G28370 60.000 70 23 2 11 80 12 76 3.55e-24 92.0
MS.gene50630.t1 AT1G28370 60.000 70 23 2 11 80 50 114 6.50e-24 92.4
MS.gene50630.t1 AT1G04370 49.194 124 43 2 18 141 15 118 1.69e-23 89.4
MS.gene50630.t1 AT5G61890 61.765 68 25 1 23 90 90 156 3.42e-23 91.3
MS.gene50630.t1 AT3G61630 70.690 58 16 1 22 79 104 160 5.87e-23 92.0
MS.gene50630.t1 AT1G71450 52.222 90 27 3 15 95 7 89 1.43e-22 88.2
MS.gene50630.t1 AT3G20310 53.488 86 35 2 12 97 16 96 1.54e-22 89.7
MS.gene50630.t1 AT1G06160 75.862 58 14 0 23 80 82 139 2.00e-22 89.4
MS.gene50630.t1 AT4G11140 67.797 59 18 1 22 80 86 143 2.11e-22 90.1
MS.gene50630.t1 AT1G28360 62.903 62 22 1 20 81 9 69 3.19e-22 87.4
MS.gene50630.t1 AT5G61590 58.140 86 33 1 8 90 92 177 3.25e-22 87.8
MS.gene50630.t1 AT4G32800 52.381 84 33 2 17 100 13 89 4.41e-22 87.8
MS.gene50630.t1 AT1G12980 58.228 79 29 2 4 79 35 112 8.16e-22 89.4
MS.gene50630.t1 AT2G46310 66.102 59 19 1 21 79 97 154 1.57e-21 87.8
MS.gene50630.t1 AT4G28140 63.934 61 21 1 23 83 143 202 1.85e-21 87.8
MS.gene50630.t1 AT4G31060 49.351 77 37 2 7 82 10 85 6.36e-21 84.0
MS.gene50630.t1 AT2G22200 66.102 59 19 1 23 81 71 128 6.37e-21 85.9
MS.gene50630.t1 AT1G22190 54.444 90 34 3 6 89 65 153 8.11e-21 85.5
MS.gene50630.t1 AT5G13910 53.571 84 36 2 8 89 3 85 8.95e-21 84.3
MS.gene50630.t1 AT1G24590 67.797 59 18 1 21 79 56 113 1.80e-20 85.1
MS.gene50630.t1 AT4G06746 56.061 66 28 1 17 82 30 94 2.03e-20 82.0
MS.gene50630.t1 AT4G27950 40.945 127 58 4 19 130 114 238 2.23e-20 85.5
MS.gene50630.t1 AT2G44940 50.000 86 36 2 15 100 92 170 2.97e-20 84.3
MS.gene50630.t1 AT1G01250 51.282 78 31 2 23 100 45 115 3.33e-20 82.4
MS.gene50630.t1 AT1G78080 67.797 59 18 1 23 81 152 209 3.38e-20 84.7
MS.gene50630.t1 AT1G28160 65.574 61 20 1 19 79 35 94 3.84e-20 83.2
MS.gene50630.t1 AT4G13620 66.102 59 19 1 23 81 232 289 4.15e-20 85.1
MS.gene50630.t1 AT5G11590 52.564 78 30 2 23 100 51 121 4.66e-20 82.8
MS.gene50630.t1 AT3G16280 62.712 59 21 1 23 81 61 118 5.46e-20 82.8
MS.gene50630.t1 AT4G39780 63.934 61 21 1 20 80 90 149 5.90e-20 83.2
MS.gene50630.t1 AT1G36060 68.966 58 17 1 23 80 143 199 6.24e-20 84.0
MS.gene50630.t1 AT2G25820 64.407 59 20 1 23 81 26 83 7.45e-20 82.0
MS.gene50630.t1 AT4G23750 53.425 73 30 2 7 79 109 177 7.59e-20 84.0
MS.gene50630.t1 AT4G23750 53.425 73 30 2 7 79 109 177 7.59e-20 84.0
MS.gene50630.t1 AT3G16280 62.712 59 21 1 23 81 79 136 7.67e-20 82.8
MS.gene50630.t1 AT5G25810 51.282 78 31 2 23 100 36 106 1.03e-19 81.6
MS.gene50630.t1 AT3G60490 45.918 98 44 3 3 100 53 141 1.23e-19 82.4
MS.gene50630.t1 AT2G20880 63.934 61 21 1 23 83 187 246 1.27e-19 83.2
MS.gene50630.t1 AT4G16750 53.165 79 35 2 16 93 33 110 1.85e-19 80.1
MS.gene50630.t1 AT5G53290 63.793 58 20 1 22 79 124 180 2.03e-19 82.8
MS.gene50630.t1 AT1G19210 52.941 68 31 1 14 81 3 69 3.00e-19 79.7
MS.gene50630.t1 AT5G25390 50.000 82 38 2 22 103 6 84 4.78e-19 79.3
MS.gene50630.t1 AT4G34410 77.586 58 12 1 23 80 136 192 6.70e-19 80.5
MS.gene50630.t1 AT5G64750 58.209 67 27 1 30 96 192 257 7.35e-19 81.6
MS.gene50630.t1 AT2G35700 54.167 72 31 2 23 93 45 115 8.90e-19 78.6
MS.gene50630.t1 AT1G46768 59.322 59 23 1 23 81 31 88 9.73e-19 77.4
MS.gene50630.t1 AT1G46768 59.322 59 23 1 23 81 31 88 9.89e-19 77.8
MS.gene50630.t1 AT1G46768 59.322 59 23 1 23 81 31 88 9.89e-19 77.8
MS.gene50630.t1 AT1G74930 58.065 62 25 1 20 81 18 78 1.25e-18 78.2
MS.gene50630.t1 AT5G25190 58.108 74 29 2 20 92 5 77 1.30e-18 78.2
MS.gene50630.t1 AT1G75490 46.809 94 44 3 14 105 31 120 1.42e-18 78.6
MS.gene50630.t1 AT3G57600 57.377 61 25 1 21 81 26 85 1.77e-18 79.3
MS.gene50630.t1 AT5G18560 63.793 58 20 1 22 79 54 110 1.79e-18 80.5
MS.gene50630.t1 AT4G36900 60.345 58 22 1 23 80 30 86 1.79e-18 77.8
MS.gene50630.t1 AT1G12890 45.370 108 49 3 22 129 20 117 2.11e-18 78.2
MS.gene50630.t1 AT5G65130 61.017 59 22 1 23 81 111 168 2.48e-18 79.0
MS.gene50630.t1 AT5G65130 61.017 59 22 1 23 81 113 170 2.60e-18 79.0
MS.gene50630.t1 AT4G25480 61.017 59 22 1 23 81 51 108 2.66e-18 77.8
MS.gene50630.t1 AT1G43160 76.271 59 13 1 22 80 60 117 2.78e-18 77.4
MS.gene50630.t1 AT2G23340 60.345 58 22 1 23 80 28 84 3.00e-18 77.0
MS.gene50630.t1 AT1G15360 61.017 59 22 1 22 80 6 63 3.25e-18 77.4
MS.gene50630.t1 AT1G15360 61.017 59 22 1 22 80 6 63 3.25e-18 77.4
MS.gene50630.t1 AT5G07310 58.904 73 29 1 23 95 92 163 3.85e-18 78.6
MS.gene50630.t1 AT3G50260 56.897 58 24 1 23 80 21 77 4.58e-18 75.9
MS.gene50630.t1 AT5G05410 39.831 118 60 4 20 127 76 192 5.76e-18 78.6
MS.gene50630.t1 AT5G05410 39.831 118 60 4 20 127 76 192 7.52e-18 78.6
MS.gene50630.t1 AT2G36450 54.430 79 28 3 23 100 15 86 1.01e-17 75.9
MS.gene50630.t1 AT5G67190 58.621 58 23 1 23 80 21 77 1.09e-17 75.5
MS.gene50630.t1 AT5G18450 57.627 59 24 1 21 79 32 89 1.36e-17 77.4
MS.gene50630.t1 AT4G25470 59.322 59 23 1 23 81 51 108 1.37e-17 76.3
MS.gene50630.t1 AT1G53170 63.889 72 24 2 9 79 16 86 1.48e-17 75.5
MS.gene50630.t1 AT5G21960 50.000 78 37 2 22 98 6 82 1.64e-17 75.9
MS.gene50630.t1 AT3G11020 52.778 72 33 1 20 91 75 145 1.66e-17 77.4
MS.gene50630.t1 AT5G25390 47.561 82 37 2 22 103 6 81 1.93e-17 75.1
MS.gene50630.t1 AT4G25490 59.322 59 23 1 23 81 48 105 2.05e-17 75.5
MS.gene50630.t1 AT5G19790 53.521 71 30 2 19 89 18 85 2.09e-17 76.3
MS.gene50630.t1 AT5G50080 68.254 63 19 1 22 84 76 137 2.56e-17 75.5
MS.gene50630.t1 AT5G50080 68.254 63 19 1 22 84 85 146 2.59e-17 75.5
MS.gene50630.t1 AT3G14230 47.934 121 52 2 22 132 122 241 3.31e-17 77.0
MS.gene50630.t1 AT3G14230 47.934 121 52 2 22 132 123 242 3.43e-17 77.0
MS.gene50630.t1 AT1G21910 56.897 58 24 1 23 80 50 106 3.45e-17 75.1
MS.gene50630.t1 AT3G14230 47.934 121 52 2 22 132 127 246 3.60e-17 77.0
MS.gene50630.t1 AT2G40340 36.434 129 68 4 21 139 12 136 3.92e-17 75.9
MS.gene50630.t1 AT2G40340 36.434 129 68 4 21 139 12 136 3.92e-17 75.9
MS.gene50630.t1 AT2G40340 36.434 129 68 4 21 139 12 136 3.92e-17 75.9
MS.gene50630.t1 AT1G22985 56.716 67 27 1 15 79 67 133 4.89e-17 73.6
MS.gene50630.t1 AT2G40340 37.037 135 68 5 15 139 74 201 7.21e-17 75.9
MS.gene50630.t1 AT2G40340 37.037 135 68 5 15 139 67 194 8.11e-17 75.9
MS.gene50630.t1 AT5G51990 40.000 100 53 2 23 122 54 146 1.00e-16 73.9
MS.gene50630.t1 AT1G53910 51.376 109 46 2 1 109 107 208 1.18e-16 75.5
MS.gene50630.t1 AT1G53910 51.376 109 46 2 1 109 109 210 1.20e-16 75.5
MS.gene50630.t1 AT1G53910 51.376 109 46 2 1 109 109 210 1.20e-16 75.5
MS.gene50630.t1 AT1G33760 58.974 78 28 2 17 91 14 90 5.74e-16 71.2
MS.gene50630.t1 AT1G68550 67.391 46 14 1 25 70 115 159 2.50e-15 71.6
MS.gene50630.t1 AT1G68550 67.391 46 14 1 25 70 115 159 2.50e-15 71.6
MS.gene50630.t1 AT1G12610 38.462 104 57 2 23 126 30 126 3.20e-15 69.7
MS.gene50630.t1 AT1G71520 40.870 115 47 6 15 123 6 105 5.07e-15 67.8
MS.gene50630.t1 AT2G40340 48.684 76 35 2 23 98 72 143 1.09e-14 69.3
MS.gene50630.t1 AT1G63030 43.590 78 37 2 23 100 30 100 2.90e-14 66.6
MS.gene50630.t1 AT1G63030 43.590 78 37 2 23 100 30 100 2.90e-14 66.6
MS.gene50630.t1 AT1G22810 38.318 107 49 3 20 123 11 103 3.03e-14 65.9
MS.gene50630.t1 AT1G77200 62.712 59 21 1 23 81 43 100 5.56e-14 67.0
MS.gene50630.t1 AT2G40350 50.000 66 29 2 15 80 69 130 5.69e-14 65.5
MS.gene50630.t1 AT2G40350 50.000 66 29 2 15 80 62 123 6.74e-14 65.1
MS.gene50630.t1 AT1G71130 55.072 69 25 3 22 84 78 146 9.91e-14 64.7
MS.gene50630.t1 AT5G67000 54.386 57 25 1 22 78 120 175 3.59e-13 63.9
MS.gene50630.t1 AT1G49120 55.224 67 24 3 8 70 69 133 6.15e-13 64.7
MS.gene50630.t1 AT2G40220 59.091 66 26 1 14 79 46 110 1.43e-12 63.9
MS.gene50630.t1 AT1G68840 48.333 60 28 1 22 81 64 120 2.86e-12 63.2
MS.gene50630.t1 AT1G68840 48.333 60 28 1 22 81 64 120 2.86e-12 63.2
MS.gene50630.t1 AT1G12630 56.338 71 26 3 23 90 19 87 9.85e-12 60.1
MS.gene50630.t1 AT5G11190 57.627 59 24 1 22 80 6 63 3.59e-11 58.5
MS.gene50630.t1 AT3G25730 30.000 130 71 3 22 134 61 187 4.46e-11 59.7
MS.gene50630.t1 AT1G77640 60.000 60 23 1 22 81 42 100 5.09e-11 58.9

Find 25 sgRNAs with CRISPR-Local

Find 29 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTGTTCCTTTCCTTGTT+GGG 0.276387 1.2:-53262638 None:intergenic
ATTCTTGTTCCTTTCCTTGT+TGG 0.306700 1.2:-53262639 None:intergenic
GGTAATGAAGAAGATGAATT+AGG 0.336637 1.2:-53262774 None:intergenic
TTAGGAGCTTGATATTCATT+AGG 0.343090 1.2:-53262756 None:intergenic
CAAGGAAAGGAACAAGAATA+TGG 0.349600 1.2:+53262643 MS.gene50630:CDS
TCAAATTCAACAAATGGAAA+TGG 0.385482 1.2:+53262543 MS.gene50630:CDS
TCGTCTTACTCTGTTGATGA+TGG 0.389155 1.2:+53262861 MS.gene50630:CDS
TTAGTTTCAAATTCAACAAA+TGG 0.391292 1.2:+53262537 MS.gene50630:CDS
ACTATTGTGTACCATCTTGA+AGG 0.442554 1.2:-53262929 None:intergenic
GAGGAAGAAGAAGAAGGAGG+TGG 0.480416 1.2:-53262834 None:intergenic
TCAGATCAAATAAAGTATAG+AGG 0.490176 1.2:+53262570 MS.gene50630:CDS
GGTGGAGGATGCATAGTAAG+AGG 0.496769 1.2:-53262801 None:intergenic
GGAGGTGGATTAGAAGAAGG+TGG 0.511330 1.2:-53262819 None:intergenic
GAAGGAGGTGGATTAGAAGA+AGG 0.514553 1.2:-53262822 None:intergenic
CAGAAATTCGTGACCCAACA+AGG 0.518541 1.2:+53262625 MS.gene50630:CDS
CTTCAAGAACTCCTTCAAGA+TGG 0.541518 1.2:+53262918 MS.gene50630:CDS
AAAGGAACAAGAATATGGCT+TGG 0.542615 1.2:+53262648 MS.gene50630:CDS
GGTGGATTAGAAGAAGGTGG+AGG 0.553230 1.2:-53262816 None:intergenic
GGATGCATAGTAAGAGGCAT+AGG 0.561973 1.2:-53262795 None:intergenic
GAGGAATTCGTAGGAGACCA+TGG 0.576225 1.2:+53262589 MS.gene50630:CDS
AGGAATTCGTAGGAGACCAT+GGG 0.579289 1.2:+53262590 MS.gene50630:CDS
ATTCGTGACCCAACAAGGAA+AGG 0.579685 1.2:+53262630 MS.gene50630:CDS
AAAGAGGAAGAAGAAGAAGG+AGG 0.579857 1.2:-53262837 None:intergenic
TAAAGTATAGAGGAATTCGT+AGG 0.619444 1.2:+53262580 MS.gene50630:CDS
GGAATTCGTAGGAGACCATG+GGG 0.739426 1.2:+53262591 MS.gene50630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAGTTTCAAATTCAACAAA+TGG + chr1.2:53262537-53262556 MS.gene50630:CDS 20.0%
! TCAAATTCAACAAATGGAAA+TGG + chr1.2:53262543-53262562 MS.gene50630:CDS 25.0%
! TCAGATCAAATAAAGTATAG+AGG + chr1.2:53262570-53262589 MS.gene50630:CDS 25.0%
GGTAATGAAGAAGATGAATT+AGG - chr1.2:53262777-53262796 None:intergenic 30.0%
TAAAGTATAGAGGAATTCGT+AGG + chr1.2:53262580-53262599 MS.gene50630:CDS 30.0%
TTAGGAGCTTGATATTCATT+AGG - chr1.2:53262759-53262778 None:intergenic 30.0%
AAAGGAACAAGAATATGGCT+TGG + chr1.2:53262648-53262667 MS.gene50630:CDS 35.0%
AACAGAGTAAGACGAAAAAG+AGG - chr1.2:53262856-53262875 None:intergenic 35.0%
ATTCTTGTTCCTTTCCTTGT+TGG - chr1.2:53262642-53262661 None:intergenic 35.0%
CAAGGAAAGGAACAAGAATA+TGG + chr1.2:53262643-53262662 MS.gene50630:CDS 35.0%
GAAAAAGAGGAAGAAGAAGA+AGG - chr1.2:53262843-53262862 None:intergenic 35.0%
TTCTTGTTCCTTTCCTTGTT+GGG - chr1.2:53262641-53262660 None:intergenic 35.0%
! TTTTGATGAGCTTGAGTTCT+TGG + chr1.2:53262884-53262903 MS.gene50630:CDS 35.0%
AAAGAGGAAGAAGAAGAAGG+AGG - chr1.2:53262840-53262859 None:intergenic 40.0%
CTTCAAGAACTCCTTCAAGA+TGG + chr1.2:53262918-53262937 MS.gene50630:CDS 40.0%
! TCGTCTTACTCTGTTGATGA+TGG + chr1.2:53262861-53262880 MS.gene50630:CDS 40.0%
AGGAATTCGTAGGAGACCAT+GGG + chr1.2:53262590-53262609 MS.gene50630:CDS 45.0%
ATTCGTGACCCAACAAGGAA+AGG + chr1.2:53262630-53262649 MS.gene50630:CDS 45.0%
CAGAAATTCGTGACCCAACA+AGG + chr1.2:53262625-53262644 MS.gene50630:CDS 45.0%
! GGATGCATAGTAAGAGGCAT+AGG - chr1.2:53262798-53262817 None:intergenic 45.0%
! TCTGCTGCAAATTTTCCCCA+TGG - chr1.2:53262609-53262628 None:intergenic 45.0%
!! GAAGGAGGTGGATTAGAAGA+AGG - chr1.2:53262825-53262844 None:intergenic 45.0%
!!! GCTGCTGCTTTTCATTTTCG+TGG + chr1.2:53262711-53262730 MS.gene50630:CDS 45.0%
GAGGAAGAAGAAGAAGGAGG+TGG - chr1.2:53262837-53262856 None:intergenic 50.0%
GAGGAATTCGTAGGAGACCA+TGG + chr1.2:53262589-53262608 MS.gene50630:CDS 50.0%
GGAATTCGTAGGAGACCATG+GGG + chr1.2:53262591-53262610 MS.gene50630:CDS 50.0%
GGTGGAGGATGCATAGTAAG+AGG - chr1.2:53262804-53262823 None:intergenic 50.0%
!! GGAGGTGGATTAGAAGAAGG+TGG - chr1.2:53262822-53262841 None:intergenic 50.0%
!! GGTGGATTAGAAGAAGGTGG+AGG - chr1.2:53262819-53262838 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 53262519 53262950 53262519 ID=MS.gene50630
chr1.2 mRNA 53262519 53262950 53262519 ID=MS.gene50630.t1;Parent=MS.gene50630
chr1.2 exon 53262519 53262950 53262519 ID=MS.gene50630.t1.exon1;Parent=MS.gene50630.t1
chr1.2 CDS 53262519 53262950 53262519 ID=cds.MS.gene50630.t1;Parent=MS.gene50630.t1
Gene Sequence

>MS.gene50630

ATGGAGGGAGATCATAAATTAGTTTCAAATTCAACAAATGGAAATGGAAATTCAGATCAAATAAAGTATAGAGGAATTCGTAGGAGACCATGGGGAAAATTTGCAGCAGAAATTCGTGACCCAACAAGGAAAGGAACAAGAATATGGCTTGGAACATTTGATACAGCTGAACAAGCTGCAAGAGCTTATGATGCTGCTGCTTTTCATTTTCGTGGTCATAGAGCTATTCTCAATTTTCCTAATGAATATCAAGCTCCTAATTCATCTTCTTCATTACCTATGCCTCTTACTATGCATCCTCCACCTTCTTCTAATCCACCTCCTTCTTCTTCTTCCTCTTTTTCGTCTTACTCTGTTGATGATGGTTTTGATGAGCTTGAGTTCTTGGATAATAAGTTGCTTCAAGAACTCCTTCAAGATGGTACACAATAG
Protein sequence

>MS.gene50630.t1

MEGDHKLVSNSTNGNGNSDQIKYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFDTAEQAARAYDAAAFHFRGHRAILNFPNEYQAPNSSSSLPMPLTMHPPPSSNPPPSSSSSFSSYSVDDGFDELEFLDNKLLQELLQDGTQ