Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50755.t1 | RHN41072.1 | 58 | 112 | 44 | 2 | 1 | 111 | 1 | 110 | 3.00E-29 | 139.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50755.t1 | A0A396GIY9 | 58.0 | 112 | 44 | 2 | 1 | 111 | 1 | 110 | 2.2e-29 | 139.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049853 | MS.gene50755 | 0.802768 | 4.80E-49 | -1.69E-46 |
| MS.gene049968 | MS.gene50755 | 0.807139 | 5.85E-50 | -1.69E-46 |
| MS.gene050026 | MS.gene50755 | 0.816488 | 5.39E-52 | -1.69E-46 |
| MS.gene052447 | MS.gene50755 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene053974 | MS.gene50755 | 0.838952 | 2.12E-57 | -1.69E-46 |
| MS.gene055017 | MS.gene50755 | 0.83621 | 1.07E-56 | -1.69E-46 |
| MS.gene055056 | MS.gene50755 | 0.815645 | 8.31E-52 | -1.69E-46 |
| MS.gene058294 | MS.gene50755 | 0.834643 | 2.66E-56 | -1.69E-46 |
| MS.gene059458 | MS.gene50755 | 0.807518 | 4.86E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene50755.t1 | MTR_5g081480 | 38.261 | 115 | 65 | 3 | 1 | 111 | 14 | 126 | 1.91e-25 | 110 |
| MS.gene50755.t1 | MTR_7g053680 | 34.054 | 185 | 107 | 7 | 1 | 175 | 147 | 326 | 7.27e-24 | 103 |
| MS.gene50755.t1 | MTR_8g468230 | 31.222 | 221 | 114 | 7 | 1 | 211 | 1 | 193 | 1.57e-23 | 102 |
| MS.gene50755.t1 | MTR_5g056650 | 39.048 | 105 | 57 | 2 | 1 | 100 | 15 | 117 | 5.81e-21 | 89.4 |
| MS.gene50755.t1 | MTR_5g071330 | 37.755 | 98 | 59 | 1 | 1 | 98 | 1 | 96 | 1.47e-19 | 84.0 |
| MS.gene50755.t1 | MTR_0065s0130 | 36.842 | 114 | 67 | 2 | 1 | 111 | 153 | 264 | 2.77e-18 | 85.5 |
| MS.gene50755.t1 | MTR_4g129380 | 32.479 | 117 | 75 | 2 | 1 | 115 | 27 | 141 | 4.20e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 121 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATCATCTCAACAATTTC+TGG | 0.148407 | 4.3:+34400077 | None:intergenic |
| TTCAACCATAATGGATATTA+TGG | 0.209633 | 4.3:-34400332 | MS.gene50755:CDS |
| AAGGAAAATGACAAAGTTTC+TGG | 0.231571 | 4.3:-34399693 | MS.gene50755:CDS |
| TTTCTTGTTTGCTTGAGATT+TGG | 0.264259 | 4.3:+34396684 | None:intergenic |
| TTATCCCCTTGTTGGTCATT+TGG | 0.277211 | 4.3:+34399975 | None:intergenic |
| AGAGGAAAGTGGGCAAGATT+TGG | 0.282082 | 4.3:-34399778 | MS.gene50755:CDS |
| TGTGGTGTTTGGACCCCTTT+TGG | 0.286987 | 4.3:+34396537 | None:intergenic |
| TTTGATGGTTTCAACCATAA+TGG | 0.293631 | 4.3:-34400341 | MS.gene50755:CDS |
| ATGATAGAGTATTATGGTTT+AGG | 0.293774 | 4.3:-34400062 | MS.gene50755:CDS |
| GAAAGAGAAAATGAAACATT+TGG | 0.303844 | 4.3:-34399927 | MS.gene50755:CDS |
| AACTTCTGTCTTGTGGTGTT+TGG | 0.310998 | 4.3:+34396526 | None:intergenic |
| CCCCTACATTATCCCCTTGT+TGG | 0.316869 | 4.3:+34399967 | None:intergenic |
| CAAGACCATAATATCCATTA+TGG | 0.321338 | 4.3:+34400327 | None:intergenic |
| GACATGACAGATTCTTCATT+TGG | 0.325046 | 4.3:+34396462 | None:intergenic |
| GTTGAGATGATAGAGTATTA+TGG | 0.329709 | 4.3:-34400068 | MS.gene50755:CDS |
| GAGGAAAGTGGGCAAGATTT+GGG | 0.348181 | 4.3:-34399777 | MS.gene50755:CDS |
| GGTAAAGATGTTAGTGGAAG+TGG | 0.349752 | 4.3:-34399870 | MS.gene50755:CDS |
| TCTGTTGGTGAAGAAGTAAT+TGG | 0.354560 | 4.3:-34399843 | MS.gene50755:CDS |
| GATGTGAGTGTAAATCAATT+TGG | 0.359257 | 4.3:-34399816 | MS.gene50755:CDS |
| TCAAAGTAGCACCAGTAATC+TGG | 0.360873 | 4.3:+34400284 | None:intergenic |
| GGAAGTAGCAGCTACTTTCT+TGG | 0.361596 | 4.3:+34396612 | None:intergenic |
| GGCTGAAGAAATGGTGCTAT+TGG | 0.362206 | 4.3:-34400186 | MS.gene50755:CDS |
| GGATGAACAGGCTGCTTCCT+TGG | 0.375806 | 4.3:+34399252 | None:intergenic |
| GCTACTTTCTTGGAAGCATT+TGG | 0.382436 | 4.3:+34396622 | None:intergenic |
| TGGTTTAGGTGAAGACAATA+TGG | 0.388319 | 4.3:-34400048 | MS.gene50755:CDS |
| AAAGAGAAAATGAAACATTT+GGG | 0.395659 | 4.3:-34399926 | MS.gene50755:CDS |
| GGTTATGTGATCCAGATTAC+TGG | 0.401072 | 4.3:-34400295 | MS.gene50755:CDS |
| AAGAAGCTATTGAATCAATC+TGG | 0.401121 | 4.3:-34400226 | MS.gene50755:CDS |
| TTAGGGGACAAGAATGTAAC+AGG | 0.401306 | 4.3:-34399723 | MS.gene50755:CDS |
| GCTGCTACATTAGTTGCAGC+TGG | 0.402690 | 4.3:+34396565 | None:intergenic |
| TTTGCGGTGGTCTGTCACTA+TGG | 0.409280 | 4.3:-34400371 | MS.gene50755:CDS |
| CACCACCACCAATGAAGAAA+AGG | 0.411701 | 4.3:-34399281 | MS.gene50755:CDS |
| ACCATTTCTTCAGCCATGTA+TGG | 0.411900 | 4.3:+34400194 | None:intergenic |
| GTCCCCTAACCCAACTTCCT+TGG | 0.415217 | 4.3:+34399737 | None:intergenic |
| TGGTGCTACTTTGATATCAT+AGG | 0.415392 | 4.3:-34400275 | MS.gene50755:CDS |
| ACTGCCAAGGAAGTTGGGTT+AGG | 0.420261 | 4.3:-34399741 | MS.gene50755:CDS |
| GACAGAAGTTGCCATTCAAA+AGG | 0.422049 | 4.3:-34396513 | MS.gene50755:CDS |
| TCAGTAGCATCTGGATGAAC+AGG | 0.422309 | 4.3:+34399240 | None:intergenic |
| CTTTCCTCTTCACCAACAGT+TGG | 0.423385 | 4.3:+34399792 | None:intergenic |
| GAGGATGGTCCTACTGATAA+TGG | 0.425224 | 4.3:-34400020 | MS.gene50755:CDS |
| ATGTGAGTGTAAATCAATTT+GGG | 0.431905 | 4.3:-34399815 | MS.gene50755:CDS |
| CAGATTCTTCATTTGGAGGT+TGG | 0.435717 | 4.3:+34396469 | None:intergenic |
| GCTACTACTGCCAAGGAAGT+TGG | 0.436988 | 4.3:-34399747 | MS.gene50755:CDS |
| GCTGCTCCATCAGTAGCATC+TGG | 0.437956 | 4.3:+34399231 | None:intergenic |
| CTGCCAAGGAAGTTGGGTTA+GGG | 0.449914 | 4.3:-34399740 | MS.gene50755:CDS |
| CTACTACTGCCAAGGAAGTT+GGG | 0.453516 | 4.3:-34399746 | MS.gene50755:CDS |
| AGTGTTCAAGATGTACATTT+TGG | 0.468900 | 4.3:-34399579 | MS.gene50755:CDS |
| AATTGATTTACACTCACATC+TGG | 0.469390 | 4.3:+34399819 | None:intergenic |
| ATGTAGCAGCAAGCTCCAAA+AGG | 0.472055 | 4.3:-34396552 | MS.gene50755:CDS |
| AATGGTGATGAGGGAGGTAA+TGG | 0.472603 | 4.3:-34399501 | MS.gene50755:CDS |
| CCATCTTCTCCCTCTACATC+AGG | 0.477452 | 4.3:+34399639 | None:intergenic |
| AATGACAAAGTTTCTGGTGT+TGG | 0.479863 | 4.3:-34399687 | MS.gene50755:CDS |
| ACAAGGGGATAATGTAGGGG+TGG | 0.483027 | 4.3:-34399964 | MS.gene50755:CDS |
| ACAGAAGTTGCCATTCAAAA+GGG | 0.484696 | 4.3:-34396512 | MS.gene50755:CDS |
| ACCAACAAGGGGATAATGTA+GGG | 0.490231 | 4.3:-34399968 | MS.gene50755:CDS |
| TGTAGCAGCAAGCTCCAAAA+GGG | 0.490764 | 4.3:-34396551 | MS.gene50755:CDS |
| ACCACCACCAATGAAGAAAA+GGG | 0.493113 | 4.3:-34399280 | MS.gene50755:CDS |
| ACCATACATGGCTGAAGAAA+TGG | 0.495920 | 4.3:-34400195 | MS.gene50755:CDS |
| AAAGCTGGTAAAGATGTTAG+TGG | 0.497765 | 4.3:-34399876 | MS.gene50755:CDS |
| CCTGATGTAGAGGGAGAAGA+TGG | 0.507640 | 4.3:-34399639 | MS.gene50755:CDS |
| GAATGTAACAGGGTGTGATA+AGG | 0.509499 | 4.3:-34399712 | MS.gene50755:CDS |
| ATTATGGTCTTGAGAGCACT+TGG | 0.512400 | 4.3:-34400316 | MS.gene50755:CDS |
| CTGTTGGTGAAGAAGTAATT+GGG | 0.513995 | 4.3:-34399842 | MS.gene50755:CDS |
| GGCTATGATGAGGGAGGTAA+TGG | 0.516479 | 4.3:-34399519 | MS.gene50755:CDS |
| GGAGGTAATGGTGATGAGAG+AGG | 0.518808 | 4.3:-34399489 | MS.gene50755:CDS |
| GAATGGCAACTTCTGTCTTG+TGG | 0.523297 | 4.3:+34396519 | None:intergenic |
| TGGGCCAACTGTTGGTGAAG+AGG | 0.523555 | 4.3:-34399796 | MS.gene50755:CDS |
| GACCAACAAGGGGATAATGT+AGG | 0.525789 | 4.3:-34399969 | MS.gene50755:CDS |
| AGGTAAGGAGCCTGATGTAG+AGG | 0.526934 | 4.3:-34399649 | MS.gene50755:CDS |
| AGTTGCAGTAGCTTTAGTCT+TGG | 0.529545 | 4.3:+34396591 | None:intergenic |
| GTTCATGGAGGATAAGTTTG+CGG | 0.534986 | 4.3:-34400387 | None:intergenic |
| CAAGGGGATAATGTAGGGGT+GGG | 0.545301 | 4.3:-34399963 | MS.gene50755:CDS |
| GAGGGAGGTAATGGTGATGA+GGG | 0.545582 | 4.3:-34399510 | MS.gene50755:CDS |
| AGTTGCAACAGAATTAGTCT+TGG | 0.546087 | 4.3:+34396648 | None:intergenic |
| GGAGGTAATGGTGATGAGGG+AGG | 0.549314 | 4.3:-34399507 | MS.gene50755:CDS |
| ATGACAGATTCTTCATTTGG+AGG | 0.562125 | 4.3:+34396465 | None:intergenic |
| TGCCAAGGAAGTTGGGTTAG+GGG | 0.565518 | 4.3:-34399739 | MS.gene50755:CDS |
| ATTTCCACTTCAACAACAGT+GGG | 0.566711 | 4.3:+34399903 | None:intergenic |
| TGCATGCTTAATGACTGCTT+TGG | 0.568632 | 4.3:-34399540 | MS.gene50755:CDS |
| GTTCATCCAGATGCTACTGA+TGG | 0.572482 | 4.3:-34399237 | MS.gene50755:CDS |
| GACTGCTTTGGCTATGATGA+GGG | 0.579326 | 4.3:-34399528 | MS.gene50755:CDS |
| ATTCAAAATGAGAGTAGTAG+TGG | 0.580494 | 4.3:-34399189 | MS.gene50755:intron |
| AGTGGAAGTGGGCCATCTGT+TGG | 0.584738 | 4.3:-34399858 | MS.gene50755:CDS |
| TGAGGGAGGTAATGGTGATG+AGG | 0.585201 | 4.3:-34399511 | MS.gene50755:CDS |
| TGGGCCCACTGTTGTTGAAG+TGG | 0.586112 | 4.3:-34399907 | MS.gene50755:CDS |
| ACTGTTGGTGAAGAGGAAAG+TGG | 0.588994 | 4.3:-34399789 | MS.gene50755:CDS |
| GGTAAGGAGCCTGATGTAGA+GGG | 0.595711 | 4.3:-34399648 | MS.gene50755:CDS |
| TTTGGAGTTTCATCAACAGT+GGG | 0.595937 | 4.3:+34399993 | None:intergenic |
| CTGTTGGTGAAGAGGAAAGT+GGG | 0.596844 | 4.3:-34399788 | MS.gene50755:CDS |
| TAATGATGATCGTGCAAGGA+GGG | 0.601062 | 4.3:-34400162 | MS.gene50755:CDS |
| GACAATATGGCTGATGAGGA+TGG | 0.602712 | 4.3:-34400035 | MS.gene50755:CDS |
| CAAGCTATAGCACAAACTGA+TGG | 0.608583 | 4.3:-34400137 | MS.gene50755:CDS |
| AAGGGGATAATGTAGGGGTG+GGG | 0.610266 | 4.3:-34399962 | MS.gene50755:CDS |
| GTTGACAACACTGTTACAGC+AGG | 0.611096 | 4.3:-34399459 | MS.gene50755:intron |
| AATCAATTTGGGCCAACTGT+TGG | 0.611832 | 4.3:-34399804 | MS.gene50755:CDS |
| ATTACTTCTTCACCAACAGA+TGG | 0.612158 | 4.3:+34399846 | None:intergenic |
| ATTTGGAGTTTCATCAACAG+TGG | 0.616368 | 4.3:+34399992 | None:intergenic |
| GTAAAGATGTTAGTGGAAGT+GGG | 0.617286 | 4.3:-34399869 | MS.gene50755:CDS |
| TGAAAATGCTACTACTGCCA+AGG | 0.619395 | 4.3:-34399754 | MS.gene50755:CDS |
| TGAAGACAATATGGCTGATG+AGG | 0.621333 | 4.3:-34400039 | MS.gene50755:CDS |
| TGGATAATGATGATCGTGCA+AGG | 0.621456 | 4.3:-34400166 | MS.gene50755:CDS |
| CATGGAGGATAAGTTTGCGG+TGG | 0.627692 | 4.3:-34400384 | MS.gene50755:CDS |
| AAACTCCAAATGACCAACAA+GGG | 0.631233 | 4.3:-34399980 | MS.gene50755:CDS |
| TATTTCCACTTCAACAACAG+TGG | 0.632028 | 4.3:+34399902 | None:intergenic |
| GAAACTCCAAATGACCAACA+AGG | 0.634637 | 4.3:-34399981 | MS.gene50755:CDS |
| TGACTGCTTTGGCTATGATG+AGG | 0.638322 | 4.3:-34399529 | MS.gene50755:CDS |
| GTGGGACCTCCATTATCAGT+AGG | 0.642267 | 4.3:+34400011 | None:intergenic |
| CAGAAGTTGCCATTCAAAAG+GGG | 0.649875 | 4.3:-34396511 | MS.gene50755:CDS |
| TCTCAAGCAAACAAGAAACA+AGG | 0.651667 | 4.3:-34396679 | MS.gene50755:CDS |
| AACTCCAAATGACCAACAAG+GGG | 0.654308 | 4.3:-34399979 | MS.gene50755:CDS |
| TGAAGAAAAGGGGTAGACCA+AGG | 0.656393 | 4.3:-34399269 | MS.gene50755:CDS |
| CCACCACCAATGAAGAAAAG+GGG | 0.661048 | 4.3:-34399279 | MS.gene50755:CDS |
| GATGGTCCTACTGATAATGG+AGG | 0.684458 | 4.3:-34400017 | MS.gene50755:CDS |
| AGGGAATGATAATGATGCTG+AGG | 0.686901 | 4.3:-34399313 | MS.gene50755:CDS |
| GTAGCAGCAAGCTCCAAAAG+GGG | 0.688503 | 4.3:-34396550 | MS.gene50755:CDS |
| TGCTTTGGCTATGATGAGGG+AGG | 0.690195 | 4.3:-34399525 | MS.gene50755:CDS |
| CCAACAAGGGGATAATGTAG+GGG | 0.709630 | 4.3:-34399967 | MS.gene50755:CDS |
| GCGGTGGTCTGTCACTATGG+TGG | 0.716755 | 4.3:-34400368 | MS.gene50755:CDS |
| CAAGCAAACAAGAAACAAGG+TGG | 0.728376 | 4.3:-34396676 | MS.gene50755:CDS |
| ATAATGATGATCGTGCAAGG+AGG | 0.738451 | 4.3:-34400163 | MS.gene50755:CDS |
| TAGGGGACAAGAATGTAACA+GGG | 0.758218 | 4.3:-34399722 | MS.gene50755:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACTATATAAGAAAGATAA+AGG | + | chr4.3:34399373-34399392 | None:intergenic | 15.0% |
| !! | ATTAATTTCTTGTGAATATA+TGG | - | chr4.3:34398727-34398746 | MS.gene50755:intron | 15.0% |
| !!! | TTTCTAAAATGGTATTAATT+TGG | - | chr4.3:34399346-34399365 | MS.gene50755:intron | 15.0% |
| !!! | TTTCTTATATAGTATCATTT+TGG | - | chr4.3:34399378-34399397 | MS.gene50755:intron | 15.0% |
| !! | AAAGAGAAAATGAAACATTT+GGG | - | chr4.3:34396934-34396953 | MS.gene50755:intron | 20.0% |
| !! | CTTTAAACCAGAAATTATTA+AGG | + | chr4.3:34399405-34399424 | None:intergenic | 20.0% |
| !! | GTGCTTATATAGTATTAATT+TGG | - | chr4.3:34399314-34399333 | MS.gene50755:CDS | 20.0% |
| !! | TTATAATCTAACATCTTCTT+TGG | + | chr4.3:34397860-34397879 | None:intergenic | 20.0% |
| !!! | ATACCATTTTAGAAAGATAA+AGG | + | chr4.3:34399341-34399360 | None:intergenic | 20.0% |
| ! | ACATATAAACATAGTAGTAG+TGG | + | chr4.3:34397446-34397465 | None:intergenic | 25.0% |
| ! | AGAAGATGTTAGATTATAAG+TGG | - | chr4.3:34397861-34397880 | MS.gene50755:intron | 25.0% |
| ! | ATGTGAGTGTAAATCAATTT+GGG | - | chr4.3:34397045-34397064 | MS.gene50755:intron | 25.0% |
| ! | ATGTTGTTAATGTATTATGC+AGG | - | chr4.3:34397527-34397546 | MS.gene50755:intron | 25.0% |
| ! | GAAAGAGAAAATGAAACATT+TGG | - | chr4.3:34396933-34396952 | MS.gene50755:intron | 25.0% |
| ! | GAAGATGTTAGATTATAAGT+GGG | - | chr4.3:34397862-34397881 | MS.gene50755:intron | 25.0% |
| ! | GTAGAAAATGTTTGAGTAAA+AGG | + | chr4.3:34400121-34400140 | None:intergenic | 25.0% |
| ! | TAAGAAAAATGACAAAGGTA+AGG | - | chr4.3:34397196-34397215 | MS.gene50755:intron | 25.0% |
| ! | TGAAATTTCTGAATTCTAAG+TGG | - | chr4.3:34398119-34398138 | MS.gene50755:intron | 25.0% |
| ! | TGTTGTTAATGTATTATGCA+GGG | - | chr4.3:34397528-34397547 | MS.gene50755:intron | 25.0% |
| !! | AATTTGTTCCTGATGAATAT+AGG | - | chr4.3:34399645-34399664 | MS.gene50755:CDS | 25.0% |
| !! | ATAGGTAATCTAGATGTTTT+AGG | - | chr4.3:34396603-34396622 | MS.gene50755:CDS | 25.0% |
| !! | ATGATAGAGTATTATGGTTT+AGG | - | chr4.3:34396798-34396817 | MS.gene50755:intron | 25.0% |
| !! | TTTTGGTCCTTAATAATTTC+TGG | - | chr4.3:34399395-34399414 | MS.gene50755:intron | 25.0% |
| !!! | CTTTTGTTTTGAGTTATATG+AGG | - | chr4.3:34397244-34397263 | MS.gene50755:intron | 25.0% |
| !!! | TCTAGATGTTTTAGGTTATA+AGG | - | chr4.3:34396611-34396630 | MS.gene50755:CDS | 25.0% |
| !!! | TTCAACCATAATGGATATTA+TGG | - | chr4.3:34396528-34396547 | MS.gene50755:CDS | 25.0% |
| AAGAAGCTATTGAATCAATC+TGG | - | chr4.3:34396634-34396653 | MS.gene50755:CDS | 30.0% | |
| AAGAGTTTACATATGCTTCA+AGG | - | chr4.3:34398444-34398463 | MS.gene50755:intron | 30.0% | |
| AAGGAAAATGACAAAGTTTC+TGG | - | chr4.3:34397167-34397186 | MS.gene50755:intron | 30.0% | |
| AATCTATATCATGGAAAGGT+TGG | - | chr4.3:34399177-34399196 | MS.gene50755:intron | 30.0% | |
| ACCAAACTAGAATTTCAACA+TGG | - | chr4.3:34397905-34397924 | MS.gene50755:intron | 30.0% | |
| AGGTTGCTTATACAAACAAA+TGG | - | chr4.3:34399272-34399291 | MS.gene50755:CDS | 30.0% | |
| ATACAAACAAATGGCTTACA+AGG | - | chr4.3:34399281-34399300 | MS.gene50755:CDS | 30.0% | |
| ATAGAGATCTACCATTAACA+GGG | + | chr4.3:34399709-34399728 | None:intergenic | 30.0% | |
| ATATGCAATTCATTCTGGTA+GGG | - | chr4.3:34397937-34397956 | MS.gene50755:intron | 30.0% | |
| ATTCAAAATGAGAGTAGTAG+TGG | - | chr4.3:34397671-34397690 | MS.gene50755:intron | 30.0% | |
| ATTCATAAGTGACCAACAAA+AGG | - | chr4.3:34398696-34398715 | MS.gene50755:intron | 30.0% | |
| CAAGACCATAATATCCATTA+TGG | + | chr4.3:34396536-34396555 | None:intergenic | 30.0% | |
| CATATGATATTCCCTGTTAA+TGG | - | chr4.3:34399695-34399714 | MS.gene50755:CDS | 30.0% | |
| GAAAATGTTTGAGTAAAAGG+TGG | + | chr4.3:34400118-34400137 | None:intergenic | 30.0% | |
| GATGAAGATTGTGAAATTCA+GGG | - | chr4.3:34397812-34397831 | MS.gene50755:intron | 30.0% | |
| GATGTGAGTGTAAATCAATT+TGG | - | chr4.3:34397044-34397063 | MS.gene50755:intron | 30.0% | |
| GTTTGTATGTGTTATATGCA+GGG | - | chr4.3:34398800-34398819 | MS.gene50755:intron | 30.0% | |
| TAAACATAGTAGTAGTTGTG+TGG | + | chr4.3:34397506-34397525 | None:intergenic | 30.0% | |
| TAGAATTTCAACATGGTATG+AGG | - | chr4.3:34397912-34397931 | MS.gene50755:intron | 30.0% | |
| TATCAAAGTGACAAAGACAA+AGG | - | chr4.3:34398228-34398247 | MS.gene50755:intron | 30.0% | |
| TCAGAATCTATATCATGGAA+AGG | - | chr4.3:34399173-34399192 | MS.gene50755:intron | 30.0% | |
| TCTATCATCTCAACAATTTC+TGG | + | chr4.3:34396786-34396805 | None:intergenic | 30.0% | |
| TCTTGTAAATCATCTTCAGA+AGG | + | chr4.3:34398394-34398413 | None:intergenic | 30.0% | |
| TGAATATATGGATGTTATCC+TGG | - | chr4.3:34398739-34398758 | MS.gene50755:intron | 30.0% | |
| TGATGAAGATTGTGAAATTC+AGG | - | chr4.3:34397811-34397830 | MS.gene50755:intron | 30.0% | |
| TGTAACAAGTGCATAGTTTA+AGG | - | chr4.3:34399430-34399449 | MS.gene50755:intron | 30.0% | |
| TGTTTGTATGTGTTATATGC+AGG | - | chr4.3:34398799-34398818 | MS.gene50755:intron | 30.0% | |
| TTCTTTGGTTGTTTGAATGT+AGG | + | chr4.3:34397845-34397864 | None:intergenic | 30.0% | |
| TTGAATGACAGTATTTGTAG+TGG | + | chr4.3:34400035-34400054 | None:intergenic | 30.0% | |
| TTGTGAAGAATGACAAATTG+AGG | - | chr4.3:34397969-34397988 | MS.gene50755:intron | 30.0% | |
| ! | AATTGATTTACACTCACATC+TGG | + | chr4.3:34397044-34397063 | None:intergenic | 30.0% |
| ! | ACCATGTTGAAATTCTAGTT+TGG | + | chr4.3:34397909-34397928 | None:intergenic | 30.0% |
| ! | AGTGTTCAAGATGTACATTT+TGG | - | chr4.3:34397281-34397300 | MS.gene50755:intron | 30.0% |
| ! | ATGTAAACTCTTTGAAAGTG+AGG | + | chr4.3:34398436-34398455 | None:intergenic | 30.0% |
| ! | ATGTCTTGGATTTTCAAAGT+TGG | + | chr4.3:34398181-34398200 | None:intergenic | 30.0% |
| ! | CTCTCATTTTGAATATCTTC+AGG | + | chr4.3:34397665-34397684 | None:intergenic | 30.0% |
| ! | GGTCCTTTATCTTTCTAAAA+TGG | - | chr4.3:34399335-34399354 | MS.gene50755:intron | 30.0% |
| ! | GTTGAGATGATAGAGTATTA+TGG | - | chr4.3:34396792-34396811 | MS.gene50755:intron | 30.0% |
| ! | GTTGGTAAGAAAAATGACAA+AGG | - | chr4.3:34397191-34397210 | MS.gene50755:intron | 30.0% |
| ! | TAATACAGCATACCTTTTGT+TGG | + | chr4.3:34398711-34398730 | None:intergenic | 30.0% |
| ! | TACTCAAACATTTTCTACTC+AGG | - | chr4.3:34400123-34400142 | MS.gene50755:CDS | 30.0% |
| ! | TGTCTTGGATTTTCAAAGTT+GGG | + | chr4.3:34398180-34398199 | None:intergenic | 30.0% |
| ! | TTGTGGTGAAAATCTTTTTG+AGG | - | chr4.3:34399481-34399500 | MS.gene50755:CDS | 30.0% |
| ! | TTTCTTGTTTGCTTGAGATT+TGG | + | chr4.3:34400179-34400198 | None:intergenic | 30.0% |
| ! | TTTGATGGTTTCAACCATAA+TGG | - | chr4.3:34396519-34396538 | MS.gene50755:CDS | 30.0% |
| !! | ATAGGGAGTATTTGATCATT+TGG | + | chr4.3:34398574-34398593 | None:intergenic | 30.0% |
| !! | ATGTTGTTGATGGATCTTTT+AGG | - | chr4.3:34398278-34398297 | MS.gene50755:intron | 30.0% |
| !! | TAGTCTTGTTGATAATGTCT+TGG | + | chr4.3:34398195-34398214 | None:intergenic | 30.0% |
| !! | TATTTGCTGTATCAGGTATA+TGG | - | chr4.3:34399607-34399626 | MS.gene50755:CDS | 30.0% |
| !! | TCAAGCTTTTTCTTGATGTT+GGG | + | chr4.3:34399247-34399266 | None:intergenic | 30.0% |
| !! | TCCTTAGTTCTCTTTTTCTT+GGG | + | chr4.3:34399791-34399810 | None:intergenic | 30.0% |
| !! | TGTTGTTGATGGATCTTTTA+GGG | - | chr4.3:34398279-34398298 | MS.gene50755:intron | 30.0% |
| !! | TTCAAGCTTTTTCTTGATGT+TGG | + | chr4.3:34399248-34399267 | None:intergenic | 30.0% |
| AAAACTTCAGCCTAATGTGA+GGG | - | chr4.3:34398150-34398169 | MS.gene50755:intron | 35.0% | |
| AAACTCCAAATGACCAACAA+GGG | - | chr4.3:34396880-34396899 | MS.gene50755:intron | 35.0% | |
| AAAGCTGGTAAAGATGTTAG+TGG | - | chr4.3:34396984-34397003 | MS.gene50755:intron | 35.0% | |
| AAATACCAAATGAGGCAACT+TGG | - | chr4.3:34398047-34398066 | MS.gene50755:intron | 35.0% | |
| AAATGAGAGTAGTAGTGGTA+CGG | - | chr4.3:34397676-34397695 | MS.gene50755:intron | 35.0% | |
| AACATATCCAAATGCATGGA+TGG | - | chr4.3:34398955-34398974 | MS.gene50755:intron | 35.0% | |
| AACTTCAGAAAACAATACCC+TGG | - | chr4.3:34398893-34398912 | MS.gene50755:intron | 35.0% | |
| AAGGAGAGACAAAAGAAACA+TGG | - | chr4.3:34398611-34398630 | MS.gene50755:intron | 35.0% | |
| AATGACAGTATTTGTAGTGG+TGG | + | chr4.3:34400032-34400051 | None:intergenic | 35.0% | |
| ACAGAAAATTGTTCCCTAGA+TGG | + | chr4.3:34399521-34399540 | None:intergenic | 35.0% | |
| ACAGAAGTTGCCATTCAAAA+GGG | - | chr4.3:34400348-34400367 | MS.gene50755:CDS | 35.0% | |
| AGAAACTAAAGGAACTGATG+TGG | - | chr4.3:34398918-34398937 | MS.gene50755:intron | 35.0% | |
| AGGACATATGCAATTCATTC+TGG | - | chr4.3:34397932-34397951 | MS.gene50755:intron | 35.0% | |
| AGGAGAGACAAAAGAAACAT+GGG | - | chr4.3:34398612-34398631 | MS.gene50755:intron | 35.0% | |
| ATACCCTGGAAAGAAACTAA+AGG | - | chr4.3:34398907-34398926 | MS.gene50755:intron | 35.0% | |
| ATCATTTGGATCTGTTCCAA+TGG | + | chr4.3:34398560-34398579 | None:intergenic | 35.0% | |
| ATGAGCTGATTATTGAGGAA+GGG | - | chr4.3:34397702-34397721 | MS.gene50755:intron | 35.0% | |
| ATGGAGCAGATCATATTTCA+GGG | - | chr4.3:34399048-34399067 | MS.gene50755:intron | 35.0% | |
| ATTACTTCTTCACCAACAGA+TGG | + | chr4.3:34397017-34397036 | None:intergenic | 35.0% | |
| ATTCACAAATGAAGAGAGCA+AGG | - | chr4.3:34399834-34399853 | MS.gene50755:CDS | 35.0% | |
| ATTGCTTATGCTGTTGTTGA+AGG | - | chr4.3:34398592-34398611 | MS.gene50755:intron | 35.0% | |
| ATTTCCACTTCAACAACAGT+GGG | + | chr4.3:34396960-34396979 | None:intergenic | 35.0% | |
| CAACAACAGCATAAGCAATA+GGG | + | chr4.3:34398591-34398610 | None:intergenic | 35.0% | |
| CAAGAAAAAGCTTGAAAGAG+AGG | - | chr4.3:34399252-34399271 | MS.gene50755:CDS | 35.0% | |
| CATAGAGATCTACCATTAAC+AGG | + | chr4.3:34399710-34399729 | None:intergenic | 35.0% | |
| CATATGCAATTCATTCTGGT+AGG | - | chr4.3:34397936-34397955 | MS.gene50755:intron | 35.0% | |
| CTGATGAATATAGGAGAGAA+AGG | - | chr4.3:34399654-34399673 | MS.gene50755:CDS | 35.0% | |
| CTGTTAATGGTAGATCTCTA+TGG | - | chr4.3:34399708-34399727 | MS.gene50755:CDS | 35.0% | |
| CTTTCTCTCCTATATTCATC+AGG | + | chr4.3:34399656-34399675 | None:intergenic | 35.0% | |
| GAAGTGGAAATAGAAAAAGC+TGG | - | chr4.3:34396969-34396988 | MS.gene50755:intron | 35.0% | |
| GATGTTAGATTATAAGTGGG+AGG | - | chr4.3:34397865-34397884 | MS.gene50755:intron | 35.0% | |
| GGAGATCAGAATCTATATCA+TGG | - | chr4.3:34399168-34399187 | MS.gene50755:intron | 35.0% | |
| GTAAAGATGTTAGTGGAAGT+GGG | - | chr4.3:34396991-34397010 | MS.gene50755:intron | 35.0% | |
| GTTATCTTCACTGTAGAATG+TGG | + | chr4.3:34398355-34398374 | None:intergenic | 35.0% | |
| TAAACATAGTAGTAGTGGTG+TGG | + | chr4.3:34397441-34397460 | None:intergenic | 35.0% | |
| TATTTCCACTTCAACAACAG+TGG | + | chr4.3:34396961-34396980 | None:intergenic | 35.0% | |
| TCAACAACAGCATAAGCAAT+AGG | + | chr4.3:34398592-34398611 | None:intergenic | 35.0% | |
| TCAACAAGACTAATGAGAAG+TGG | - | chr4.3:34398203-34398222 | MS.gene50755:intron | 35.0% | |
| TCAGGTAGAAGATAAAGGTT+TGG | - | chr4.3:34397739-34397758 | MS.gene50755:intron | 35.0% | |
| TCAGTATAACACACATATCC+AGG | + | chr4.3:34398760-34398779 | None:intergenic | 35.0% | |
| TCATCTTGTATGTGTGAAAC+AGG | - | chr4.3:34399456-34399475 | MS.gene50755:intron | 35.0% | |
| TCTCAAGCAAACAAGAAACA+AGG | - | chr4.3:34400181-34400200 | MS.gene50755:CDS | 35.0% | |
| TCTTTCAACTCTGTCATTGT+TGG | - | chr4.3:34399112-34399131 | MS.gene50755:intron | 35.0% | |
| TGACAAATTGAGGATGAGAT+TGG | - | chr4.3:34397979-34397998 | MS.gene50755:intron | 35.0% | |
| TGGTTTAGGTGAAGACAATA+TGG | - | chr4.3:34396812-34396831 | MS.gene50755:intron | 35.0% | |
| TGTACCAAAGTGTGATACAT+TGG | - | chr4.3:34399072-34399091 | MS.gene50755:intron | 35.0% | |
| TTAGATTATAAGTGGGAGGT+TGG | - | chr4.3:34397869-34397888 | MS.gene50755:intron | 35.0% | |
| TTCAAATACCACCTAGAAGA+TGG | - | chr4.3:34399029-34399048 | MS.gene50755:intron | 35.0% | |
| TTGACCAATGTATCACACTT+TGG | + | chr4.3:34399079-34399098 | None:intergenic | 35.0% | |
| TTGTGCCAAAATACCAAATG+AGG | - | chr4.3:34398039-34398058 | MS.gene50755:intron | 35.0% | |
| TTTCTGAATTCTAAGTGGCT+TGG | - | chr4.3:34398124-34398143 | MS.gene50755:intron | 35.0% | |
| ! | AATTCTGAAGAGCTTGATAG+TGG | - | chr4.3:34397779-34397798 | MS.gene50755:intron | 35.0% |
| ! | AGATTTGCTTGTGAATGACT+TGG | - | chr4.3:34398645-34398664 | MS.gene50755:intron | 35.0% |
| ! | AGTTCCTTTAGTTTCTTTCC+AGG | + | chr4.3:34398914-34398933 | None:intergenic | 35.0% |
| ! | AGTTGCAACAGAATTAGTCT+TGG | + | chr4.3:34400215-34400234 | None:intergenic | 35.0% |
| ! | AGTTGCCTCATTTGGTATTT+TGG | + | chr4.3:34398047-34398066 | None:intergenic | 35.0% |
| ! | ATTTGGAGTTTCATCAACAG+TGG | + | chr4.3:34396871-34396890 | None:intergenic | 35.0% |
| ! | CTGTTGGTGAAGAAGTAATT+GGG | - | chr4.3:34397018-34397037 | MS.gene50755:intron | 35.0% |
| ! | GATTTGCTTGTGAATGACTT+GGG | - | chr4.3:34398646-34398665 | MS.gene50755:intron | 35.0% |
| ! | GTTCCTTTAGTTTCTTTCCA+GGG | + | chr4.3:34398913-34398932 | None:intergenic | 35.0% |
| ! | TCTGTTGGTGAAGAAGTAAT+TGG | - | chr4.3:34397017-34397036 | MS.gene50755:intron | 35.0% |
| ! | TTTGGAGTTTCATCAACAGT+GGG | + | chr4.3:34396870-34396889 | None:intergenic | 35.0% |
| !! | AATGACAAAGTTTCTGGTGT+TGG | - | chr4.3:34397173-34397192 | MS.gene50755:intron | 35.0% |
| !! | GTCCTTAGTTCTCTTTTTCT+TGG | + | chr4.3:34399792-34399811 | None:intergenic | 35.0% |
| !! | TACATGGTATTTGCTGTATC+AGG | - | chr4.3:34399600-34399619 | MS.gene50755:CDS | 35.0% |
| !! | TGGTGCTACTTTGATATCAT+AGG | - | chr4.3:34396585-34396604 | MS.gene50755:CDS | 35.0% |
| !!! | ACATTTTGGTGATGAAGACA+TGG | - | chr4.3:34397295-34397314 | MS.gene50755:intron | 35.0% |
| !!! | CTGGTTTTATGAACCATACA+TGG | - | chr4.3:34396653-34396672 | MS.gene50755:CDS | 35.0% |
| !!! | GGAAGTAGTTGATTGGTTTT+GGG | + | chr4.3:34400008-34400027 | None:intergenic | 35.0% |
| !!! | GTGAAAATCTTTTTGAGGTC+TGG | - | chr4.3:34399486-34399505 | MS.gene50755:CDS | 35.0% |
| !!! | TGATCACTGGTTTTGATCTA+GGG | + | chr4.3:34399138-34399157 | None:intergenic | 35.0% |
| !!! | TGGAAGTAGTTGATTGGTTT+TGG | + | chr4.3:34400009-34400028 | None:intergenic | 35.0% |
| AAAAGGTGGTTGACTACAAG+TGG | + | chr4.3:34400104-34400123 | None:intergenic | 40.0% | |
| AAACAAGAGACTGCTCTTGT+AGG | - | chr4.3:34399549-34399568 | MS.gene50755:CDS | 40.0% | |
| AACTCCAAATGACCAACAAG+GGG | - | chr4.3:34396881-34396900 | MS.gene50755:intron | 40.0% | |
| AACTTCTGTCTTGTGGTGTT+TGG | + | chr4.3:34400337-34400356 | None:intergenic | 40.0% | |
| AATCAATTTGGGCCAACTGT+TGG | - | chr4.3:34397056-34397075 | MS.gene50755:intron | 40.0% | |
| AATGCCTAACACAGAATCTG+TGG | + | chr4.3:34398865-34398884 | None:intergenic | 40.0% | |
| ACCAACAAGGGGATAATGTA+GGG | - | chr4.3:34396892-34396911 | MS.gene50755:intron | 40.0% | |
| ACCACCACCAATGAAGAAAA+GGG | - | chr4.3:34397580-34397599 | MS.gene50755:intron | 40.0% | |
| ACCATACATGGCTGAAGAAA+TGG | - | chr4.3:34396665-34396684 | MS.gene50755:CDS | 40.0% | |
| ACCATTTCTTCAGCCATGTA+TGG | + | chr4.3:34396669-34396688 | None:intergenic | 40.0% | |
| ACTAAAGGAACTGATGTGGA+AGG | - | chr4.3:34398922-34398941 | MS.gene50755:intron | 40.0% | |
| AGACAAAAGAAACATGGGCT+TGG | - | chr4.3:34398617-34398636 | MS.gene50755:intron | 40.0% | |
| ATAATGATGATCGTGCAAGG+AGG | - | chr4.3:34396697-34396716 | MS.gene50755:intron | 40.0% | |
| ATAGCATCCATCCATGCATT+TGG | + | chr4.3:34398965-34398984 | None:intergenic | 40.0% | |
| CAAAACTTCAGCCTAATGTG+AGG | - | chr4.3:34398149-34398168 | MS.gene50755:intron | 40.0% | |
| CAAATGAAGAGAGCAAGGTT+TGG | - | chr4.3:34399839-34399858 | MS.gene50755:CDS | 40.0% | |
| CAAGCAAACAAGAAACAAGG+TGG | - | chr4.3:34400184-34400203 | MS.gene50755:CDS | 40.0% | |
| CAAGCTATAGCACAAACTGA+TGG | - | chr4.3:34396723-34396742 | MS.gene50755:intron | 40.0% | |
| CAATGATAGGTCTGCACTTT+AGG | + | chr4.3:34398486-34398505 | None:intergenic | 40.0% | |
| CAGAAGTTGCCATTCAAAAG+GGG | - | chr4.3:34400349-34400368 | MS.gene50755:CDS | 40.0% | |
| CAGCAAATACCATGTACACA+TGG | + | chr4.3:34399596-34399615 | None:intergenic | 40.0% | |
| CAGCAACATATCCAAATGCA+TGG | - | chr4.3:34398951-34398970 | MS.gene50755:intron | 40.0% | |
| CATCTCTCAGCATTTCAGAT+GGG | + | chr4.3:34399814-34399833 | None:intergenic | 40.0% | |
| CTAAAGTGCAGACCTATCAT+TGG | - | chr4.3:34398484-34398503 | MS.gene50755:intron | 40.0% | |
| CTACCTGGTTGTCTTCTAAT+AGG | + | chr4.3:34399767-34399786 | None:intergenic | 40.0% | |
| CTATTAGAAGACAACCAGGT+AGG | - | chr4.3:34399765-34399784 | MS.gene50755:CDS | 40.0% | |
| CTGGTTGTCTTCTAATAGGT+GGG | + | chr4.3:34399763-34399782 | None:intergenic | 40.0% | |
| GAAACTCCAAATGACCAACA+AGG | - | chr4.3:34396879-34396898 | MS.gene50755:intron | 40.0% | |
| GAATGTAACAGGGTGTGATA+AGG | - | chr4.3:34397148-34397167 | MS.gene50755:intron | 40.0% | |
| GACAGAAGTTGCCATTCAAA+AGG | - | chr4.3:34400347-34400366 | MS.gene50755:CDS | 40.0% | |
| GATGAGCTGATTATTGAGGA+AGG | - | chr4.3:34397701-34397720 | MS.gene50755:intron | 40.0% | |
| GATGGAGCAGATCATATTTC+AGG | - | chr4.3:34399047-34399066 | MS.gene50755:intron | 40.0% | |
| GCATGTCAGGTAGAAGATAA+AGG | - | chr4.3:34397734-34397753 | MS.gene50755:intron | 40.0% | |
| GCCCAAGAAAAAGAGAACTA+AGG | - | chr4.3:34399787-34399806 | MS.gene50755:CDS | 40.0% | |
| GGATGATGAGCTGATTATTG+AGG | - | chr4.3:34397697-34397716 | MS.gene50755:intron | 40.0% | |
| GGTAAAGATGTTAGTGGAAG+TGG | - | chr4.3:34396990-34397009 | MS.gene50755:intron | 40.0% | |
| GGTTATGTGATCCAGATTAC+TGG | - | chr4.3:34396565-34396584 | MS.gene50755:CDS | 40.0% | |
| TAAAGGTTTGGAAGATGCTG+AGG | - | chr4.3:34397751-34397770 | MS.gene50755:intron | 40.0% | |
| TAATGATGATCGTGCAAGGA+GGG | - | chr4.3:34396698-34396717 | MS.gene50755:intron | 40.0% | |
| TACATGTAGTAGGGGTAACA+AGG | - | chr4.3:34398096-34398115 | MS.gene50755:intron | 40.0% | |
| TAGGGGACAAGAATGTAACA+GGG | - | chr4.3:34397138-34397157 | MS.gene50755:intron | 40.0% | |
| TATGATCTGCTCCATCTTCT+AGG | + | chr4.3:34399043-34399062 | None:intergenic | 40.0% | |
| TCAAAGTAGCACCAGTAATC+TGG | + | chr4.3:34396579-34396598 | None:intergenic | 40.0% | |
| TCATCTCTCAGCATTTCAGA+TGG | + | chr4.3:34399815-34399834 | None:intergenic | 40.0% | |
| TCATCTTCAGAAGGCAGATA+TGG | + | chr4.3:34398385-34398404 | None:intergenic | 40.0% | |
| TCCTGACCATACATGTAGTA+GGG | - | chr4.3:34398087-34398106 | MS.gene50755:intron | 40.0% | |
| TGAAAATGCTACTACTGCCA+AGG | - | chr4.3:34397106-34397125 | MS.gene50755:intron | 40.0% | |
| TGAAGACAATATGGCTGATG+AGG | - | chr4.3:34396821-34396840 | MS.gene50755:intron | 40.0% | |
| TGAGGATTCAGATTAGCAGT+AGG | + | chr4.3:34398418-34398437 | None:intergenic | 40.0% | |
| TGCATGCTTAATGACTGCTT+TGG | - | chr4.3:34397320-34397339 | MS.gene50755:intron | 40.0% | |
| TGCATTTGGATATGTTGCTG+TGG | + | chr4.3:34398951-34398970 | None:intergenic | 40.0% | |
| TGCTTCCTGAAAGGTTACTA+TGG | - | chr4.3:34398517-34398536 | MS.gene50755:intron | 40.0% | |
| TGGAGCAGATCATATTTCAG+GGG | - | chr4.3:34399049-34399068 | MS.gene50755:intron | 40.0% | |
| TGGATAATGATGATCGTGCA+AGG | - | chr4.3:34396694-34396713 | MS.gene50755:intron | 40.0% | |
| TGGTTGTCTTCTAATAGGTG+GGG | + | chr4.3:34399762-34399781 | None:intergenic | 40.0% | |
| TGTAGCAGATGTAAGTCAGT+TGG | - | chr4.3:34399869-34399888 | MS.gene50755:CDS | 40.0% | |
| TGTTACCCCTACTACATGTA+TGG | + | chr4.3:34398096-34398115 | None:intergenic | 40.0% | |
| TTAGGGGACAAGAATGTAAC+AGG | - | chr4.3:34397137-34397156 | MS.gene50755:intron | 40.0% | |
| TTATCCCCTTGTTGGTCATT+TGG | + | chr4.3:34396888-34396907 | None:intergenic | 40.0% | |
| TTCCTGAAAGGTTACTATGG+TGG | - | chr4.3:34398520-34398539 | MS.gene50755:intron | 40.0% | |
| TTGACCACAGATTCTGTGTT+AGG | - | chr4.3:34398858-34398877 | MS.gene50755:intron | 40.0% | |
| TTGGCTGTTGATGTTGTTGA+TGG | - | chr4.3:34398268-34398287 | MS.gene50755:intron | 40.0% | |
| ! | AGGGAATGATAATGATGCTG+AGG | - | chr4.3:34397547-34397566 | MS.gene50755:intron | 40.0% |
| ! | CTGGCACATTTTTCCATCTA+GGG | - | chr4.3:34399505-34399524 | MS.gene50755:CDS | 40.0% |
| ! | GGAAGCAGTTGATTGGTTAT+GGG | + | chr4.3:34400074-34400093 | None:intergenic | 40.0% |
| ! | GGTCAACTTTTAACAGCCAT+TGG | - | chr4.3:34398541-34398560 | MS.gene50755:intron | 40.0% |
| ! | TCTGGCACATTTTTCCATCT+AGG | - | chr4.3:34399504-34399523 | MS.gene50755:CDS | 40.0% |
| ! | TGGAAGCAGTTGATTGGTTA+TGG | + | chr4.3:34400075-34400094 | None:intergenic | 40.0% |
| !! | AGTTGCAGTAGCTTTAGTCT+TGG | + | chr4.3:34400272-34400291 | None:intergenic | 40.0% |
| !! | ATTATGGTCTTGAGAGCACT+TGG | - | chr4.3:34396544-34396563 | MS.gene50755:CDS | 40.0% |
| !! | CACTATGGTGGTGATTTTGA+TGG | - | chr4.3:34396504-34396523 | MS.gene50755:CDS | 40.0% |
| !! | CTTTTAGGGAGCAGTATACT+AGG | - | chr4.3:34398293-34398312 | MS.gene50755:intron | 40.0% |
| !! | GCTACTTTCTTGGAAGCATT+TGG | + | chr4.3:34400241-34400260 | None:intergenic | 40.0% |
| !! | GGTAGTAGATGGATTATCAG+TGG | + | chr4.3:34399945-34399964 | None:intergenic | 40.0% |
| !! | TAGATGGATTATCAGTGGCT+TGG | + | chr4.3:34399940-34399959 | None:intergenic | 40.0% |
| !!! | GTAGTTGATTGGTTTTGGGT+TGG | + | chr4.3:34400004-34400023 | None:intergenic | 40.0% |
| !!! | GTGATCACTGGTTTTGATCT+AGG | + | chr4.3:34399139-34399158 | None:intergenic | 40.0% |
| !!! | TGGGAGGTTGGTACATATTT+TGG | - | chr4.3:34397881-34397900 | MS.gene50755:intron | 40.0% |
| ACCAGTGATCACTATGCTTG+AGG | - | chr4.3:34399147-34399166 | MS.gene50755:intron | 45.0% | |
| AGAAGATGCTTGAATGCCTC+TGG | + | chr4.3:34399010-34399029 | None:intergenic | 45.0% | |
| AGAGGAAAGTGGGCAAGATT+TGG | - | chr4.3:34397082-34397101 | MS.gene50755:intron | 45.0% | |
| AGATTGGAGTGTAGAGGTAG+AGG | - | chr4.3:34397995-34398014 | MS.gene50755:intron | 45.0% | |
| AGCTGAAGTCTGTGCATTTG+TGG | + | chr4.3:34400152-34400171 | None:intergenic | 45.0% | |
| AGGATGAGATTGGAGTGTAG+AGG | - | chr4.3:34397989-34398008 | MS.gene50755:intron | 45.0% | |
| ATGTAGCAGCAAGCTCCAAA+AGG | - | chr4.3:34400308-34400327 | MS.gene50755:CDS | 45.0% | |
| ATGTTGGGCAAAACACTGTC+TGG | + | chr4.3:34399232-34399251 | None:intergenic | 45.0% | |
| ATTGAGTGACAGTGGTGGTA+TGG | + | chr4.3:34399973-34399992 | None:intergenic | 45.0% | |
| CACCACCACCAATGAAGAAA+AGG | - | chr4.3:34397579-34397598 | MS.gene50755:intron | 45.0% | |
| CATCCATCCAAGCCAATGAT+AGG | + | chr4.3:34398499-34398518 | None:intergenic | 45.0% | |
| CCAACAAGGGGATAATGTAG+GGG | - | chr4.3:34396893-34396912 | MS.gene50755:intron | 45.0% | |
| CCACCACCAATGAAGAAAAG+GGG | - | chr4.3:34397581-34397600 | MS.gene50755:intron | 45.0% | |
| CCACCTATTAGAAGACAACC+AGG | - | chr4.3:34399761-34399780 | MS.gene50755:CDS | 45.0% | |
| CCTGACCATACATGTAGTAG+GGG | - | chr4.3:34398088-34398107 | MS.gene50755:intron | 45.0% | |
| CCTGGTTGTCTTCTAATAGG+TGG | + | chr4.3:34399764-34399783 | None:intergenic | 45.0% | |
| CTACTACTGCCAAGGAAGTT+GGG | - | chr4.3:34397114-34397133 | MS.gene50755:intron | 45.0% | |
| CTGATTATTGAGGAAGGGTC+TGG | - | chr4.3:34397707-34397726 | MS.gene50755:intron | 45.0% | |
| CTTTCCTCTTCACCAACAGT+TGG | + | chr4.3:34397071-34397090 | None:intergenic | 45.0% | |
| GAATGGCAACTTCTGTCTTG+TGG | + | chr4.3:34400344-34400363 | None:intergenic | 45.0% | |
| GACAATATGGCTGATGAGGA+TGG | - | chr4.3:34396825-34396844 | MS.gene50755:intron | 45.0% | |
| GACAGTATTTGTAGTGGTGG+TGG | + | chr4.3:34400029-34400048 | None:intergenic | 45.0% | |
| GACCAACAAGGGGATAATGT+AGG | - | chr4.3:34396891-34396910 | MS.gene50755:intron | 45.0% | |
| GACCACCATAGTAACCTTTC+AGG | + | chr4.3:34398525-34398544 | None:intergenic | 45.0% | |
| GACTGCTTTGGCTATGATGA+GGG | - | chr4.3:34397332-34397351 | MS.gene50755:intron | 45.0% | |
| GAGGAAAGTGGGCAAGATTT+GGG | - | chr4.3:34397083-34397102 | MS.gene50755:intron | 45.0% | |
| GAGGATGGTCCTACTGATAA+TGG | - | chr4.3:34396840-34396859 | MS.gene50755:intron | 45.0% | |
| GATCAAGGCAATCAATCCAG+AGG | - | chr4.3:34398991-34399010 | MS.gene50755:intron | 45.0% | |
| GGATGCTATGAAGGAGATCA+AGG | - | chr4.3:34398976-34398995 | MS.gene50755:intron | 45.0% | |
| GGTTGTCTTCTAATAGGTGG+GGG | + | chr4.3:34399761-34399780 | None:intergenic | 45.0% | |
| GTCCTGACCATACATGTAGT+AGG | - | chr4.3:34398086-34398105 | MS.gene50755:intron | 45.0% | |
| GTTCATCCAGATGCTACTGA+TGG | - | chr4.3:34397623-34397642 | MS.gene50755:intron | 45.0% | |
| GTTGACAACACTGTTACAGC+AGG | - | chr4.3:34397401-34397420 | MS.gene50755:intron | 45.0% | |
| TAGAGGCAACTGTGAATGGA+AGG | - | chr4.3:34398012-34398031 | MS.gene50755:intron | 45.0% | |
| TCAGTAGCATCTGGATGAAC+AGG | + | chr4.3:34397623-34397642 | None:intergenic | 45.0% | |
| TCCTCAAGCATAGTGATCAC+TGG | + | chr4.3:34399151-34399170 | None:intergenic | 45.0% | |
| TGAAGAAAAGGGGTAGACCA+AGG | - | chr4.3:34397591-34397610 | MS.gene50755:intron | 45.0% | |
| TGACTGCTTTGGCTATGATG+AGG | - | chr4.3:34397331-34397350 | MS.gene50755:intron | 45.0% | |
| TGCATGGATGGATGCTATGA+AGG | - | chr4.3:34398967-34398986 | MS.gene50755:intron | 45.0% | |
| TGGTTGACTACAAGTGGTGT+GGG | + | chr4.3:34400098-34400117 | None:intergenic | 45.0% | |
| TGTAGCAGCAAGCTCCAAAA+GGG | - | chr4.3:34400309-34400328 | MS.gene50755:CDS | 45.0% | |
| TGTAGGAAGTGGTTGTTGAC+TGG | - | chr4.3:34399566-34399585 | MS.gene50755:CDS | 45.0% | |
| TTGAGCAACTCATCCATTGC+TGG | + | chr4.3:34398833-34398852 | None:intergenic | 45.0% | |
| TTGAGTGACAGTGGTGGTAT+GGG | + | chr4.3:34399972-34399991 | None:intergenic | 45.0% | |
| TTGGATGGATGCTTCCTGAA+AGG | - | chr4.3:34398508-34398527 | MS.gene50755:intron | 45.0% | |
| ! | AATGGTGATGAGGGAGGTAA+TGG | - | chr4.3:34397359-34397378 | MS.gene50755:intron | 45.0% |
| ! | ACTGTTGGTGAAGAGGAAAG+TGG | - | chr4.3:34397071-34397090 | MS.gene50755:intron | 45.0% |
| ! | CTACCCCTTTTCTTCATTGG+TGG | + | chr4.3:34397587-34397606 | None:intergenic | 45.0% |
| ! | CTGTTGGTGAAGAGGAAAGT+GGG | - | chr4.3:34397072-34397091 | MS.gene50755:intron | 45.0% |
| ! | CTTGTTCGACCCCTTTTGAA+TGG | + | chr4.3:34400361-34400380 | None:intergenic | 45.0% |
| ! | GCAGTTGATTGGTTATGGGT+TGG | + | chr4.3:34400070-34400089 | None:intergenic | 45.0% |
| ! | GGAAGTAGCAGCTACTTTCT+TGG | + | chr4.3:34400251-34400270 | None:intergenic | 45.0% |
| ! | GGTCTACCCCTTTTCTTCAT+TGG | + | chr4.3:34397590-34397609 | None:intergenic | 45.0% |
| ! | GTAGGAAGTGGTTGTTGACT+GGG | - | chr4.3:34399567-34399586 | MS.gene50755:CDS | 45.0% |
| ! | TATGTGTGAAACAGGCGTTG+TGG | - | chr4.3:34399464-34399483 | MS.gene50755:CDS | 45.0% |
| ! | TTGCTTGTGAATGACTTGGG+TGG | - | chr4.3:34398649-34398668 | MS.gene50755:intron | 45.0% |
| !! | AGACCTATCATTGGCTTGGA+TGG | - | chr4.3:34398493-34398512 | MS.gene50755:intron | 45.0% |
| !! | AGCCAATGATCTAGCTCTGA+TGG | + | chr4.3:34398254-34398273 | None:intergenic | 45.0% |
| !! | GATGGTCCTACTGATAATGG+AGG | - | chr4.3:34396843-34396862 | MS.gene50755:intron | 45.0% |
| !! | GGCTGAAGAAATGGTGCTAT+TGG | - | chr4.3:34396674-34396693 | MS.gene50755:CDS | 45.0% |
| !! | TGGTGGTGGAAGTAGTTGAT+TGG | + | chr4.3:34400015-34400034 | None:intergenic | 45.0% |
| AAGGGGATAATGTAGGGGTG+GGG | - | chr4.3:34396898-34396917 | MS.gene50755:intron | 50.0% | |
| ACAAGGGGATAATGTAGGGG+TGG | - | chr4.3:34396896-34396915 | MS.gene50755:intron | 50.0% | |
| ACTGCCAAGGAAGTTGGGTT+AGG | - | chr4.3:34397119-34397138 | MS.gene50755:intron | 50.0% | |
| ACTGGGCTACCATGTGTACA+TGG | - | chr4.3:34399584-34399603 | MS.gene50755:CDS | 50.0% | |
| AGCTGCCAAGTTGCCTCATT+TGG | + | chr4.3:34398055-34398074 | None:intergenic | 50.0% | |
| AGGTAAGGAGCCTGATGTAG+AGG | - | chr4.3:34397211-34397230 | MS.gene50755:intron | 50.0% | |
| AGGTGATTGAGTGACAGTGG+TGG | + | chr4.3:34399978-34399997 | None:intergenic | 50.0% | |
| CAAGGGGATAATGTAGGGGT+GGG | - | chr4.3:34396897-34396916 | MS.gene50755:intron | 50.0% | |
| CCATCTTCTCCCTCTACATC+AGG | + | chr4.3:34397224-34397243 | None:intergenic | 50.0% | |
| CCCCTACATTATCCCCTTGT+TGG | + | chr4.3:34396896-34396915 | None:intergenic | 50.0% | |
| CCCCTACTACATGTATGGTC+AGG | + | chr4.3:34398091-34398110 | None:intergenic | 50.0% | |
| CCTGATGTAGAGGGAGAAGA+TGG | - | chr4.3:34397221-34397240 | MS.gene50755:intron | 50.0% | |
| CTGCCAAGGAAGTTGGGTTA+GGG | - | chr4.3:34397120-34397139 | MS.gene50755:intron | 50.0% | |
| GAGACTGCTCTTGTAGGAAG+TGG | - | chr4.3:34399555-34399574 | MS.gene50755:CDS | 50.0% | |
| GAGGTAGAGGCAACTGTGAA+TGG | - | chr4.3:34398008-34398027 | MS.gene50755:intron | 50.0% | |
| GATCTGCTCCATCTTCTAGG+TGG | + | chr4.3:34399040-34399059 | None:intergenic | 50.0% | |
| GCTACTACTGCCAAGGAAGT+TGG | - | chr4.3:34397113-34397132 | MS.gene50755:intron | 50.0% | |
| GCTGCTACATTAGTTGCAGC+TGG | + | chr4.3:34400298-34400317 | None:intergenic | 50.0% | |
| GGCCATCAGAGCTAGATCAT+TGG | - | chr4.3:34398249-34398268 | MS.gene50755:intron | 50.0% | |
| GGCTATGATGAGGGAGGTAA+TGG | - | chr4.3:34397341-34397360 | MS.gene50755:intron | 50.0% | |
| GGTAAGGAGCCTGATGTAGA+GGG | - | chr4.3:34397212-34397231 | MS.gene50755:intron | 50.0% | |
| GTAGCAGCAAGCTCCAAAAG+GGG | - | chr4.3:34400310-34400329 | MS.gene50755:CDS | 50.0% | |
| GTGGGACCTCCATTATCAGT+AGG | + | chr4.3:34396852-34396871 | None:intergenic | 50.0% | |
| GTGGTTGACTACAAGTGGTG+TGG | + | chr4.3:34400099-34400118 | None:intergenic | 50.0% | |
| GTTGGGTTCTCCCTCACATT+AGG | + | chr4.3:34398163-34398182 | None:intergenic | 50.0% | |
| TATTGAGGAAGGGTCTGGTC+AGG | - | chr4.3:34397712-34397731 | MS.gene50755:intron | 50.0% | |
| TGCAGGTGATTGAGTGACAG+TGG | + | chr4.3:34399981-34400000 | None:intergenic | 50.0% | |
| TGCTTTGGCTATGATGAGGG+AGG | - | chr4.3:34397335-34397354 | MS.gene50755:intron | 50.0% | |
| TGTGGGTGGAAGCAGTTGAT+TGG | + | chr4.3:34400081-34400100 | None:intergenic | 50.0% | |
| TTCTAATAGGTGGGGGTTGC+AGG | + | chr4.3:34399754-34399773 | None:intergenic | 50.0% | |
| TTGACTACAAGTGGTGTGGG+TGG | + | chr4.3:34400095-34400114 | None:intergenic | 50.0% | |
| TTTGCGGTGGTCTGTCACTA+TGG | - | chr4.3:34396489-34396508 | MS.gene50755:CDS | 50.0% | |
| ! | CCCCTTTTCTTCATTGGTGG+TGG | + | chr4.3:34397584-34397603 | None:intergenic | 50.0% |
| ! | CTCTTTTTCTTGGGCCTACC+TGG | + | chr4.3:34399782-34399801 | None:intergenic | 50.0% |
| ! | GAGGGAGGTAATGGTGATGA+GGG | - | chr4.3:34397350-34397369 | MS.gene50755:intron | 50.0% |
| ! | GGAGGTAATGGTGATGAGAG+AGG | - | chr4.3:34397371-34397390 | MS.gene50755:intron | 50.0% |
| ! | GTATGGGTGGTGGTAGTAGA+TGG | + | chr4.3:34399956-34399975 | None:intergenic | 50.0% |
| ! | GTGCAGACCTATCATTGGCT+TGG | - | chr4.3:34398489-34398508 | MS.gene50755:intron | 50.0% |
| ! | TGAGGGAGGTAATGGTGATG+AGG | - | chr4.3:34397349-34397368 | MS.gene50755:intron | 50.0% |
| ! | TGCCAAGGAAGTTGGGTTAG+GGG | - | chr4.3:34397121-34397140 | MS.gene50755:intron | 50.0% |
| ! | TGTGAATGACTTGGGTGGTG+TGG | - | chr4.3:34398654-34398673 | MS.gene50755:intron | 50.0% |
| ! | TGTGGTGTTTGGACCCCTTT+TGG | + | chr4.3:34400326-34400345 | None:intergenic | 50.0% |
| !! | GATTGGTTATGGGTTGGTGC+AGG | + | chr4.3:34400064-34400083 | None:intergenic | 50.0% |
| !!! | GATTGGTTTTGGGTTGGTGC+AGG | + | chr4.3:34399998-34400017 | None:intergenic | 50.0% |
| !!! | TCAGTGGCTTGGTTTTCAGC+AGG | + | chr4.3:34399929-34399948 | None:intergenic | 50.0% |
| ACTTGGCAGCTGAGGCAAGT+TGG | - | chr4.3:34398064-34398083 | MS.gene50755:intron | 55.0% | |
| AGTGACAGTGGTGGTATGGG+TGG | + | chr4.3:34399969-34399988 | None:intergenic | 55.0% | |
| AGTGGAAGTGGGCCATCTGT+TGG | - | chr4.3:34397002-34397021 | MS.gene50755:intron | 55.0% | |
| ATGAGGCAACTTGGCAGCTG+AGG | - | chr4.3:34398056-34398075 | MS.gene50755:intron | 55.0% | |
| GCTGCTCCATCAGTAGCATC+TGG | + | chr4.3:34397632-34397651 | None:intergenic | 55.0% | |
| GGATGAACAGGCTGCTTCCT+TGG | + | chr4.3:34397611-34397630 | None:intergenic | 55.0% | |
| GTCCCCTAACCCAACTTCCT+TGG | + | chr4.3:34397126-34397145 | None:intergenic | 55.0% | |
| TGGGCCCACTGTTGTTGAAG+TGG | - | chr4.3:34396953-34396972 | MS.gene50755:intron | 55.0% | |
| ! | GGAGGTAATGGTGATGAGGG+AGG | - | chr4.3:34397353-34397372 | MS.gene50755:intron | 55.0% |
| ! | TGGGCCAACTGTTGGTGAAG+AGG | - | chr4.3:34397064-34397083 | MS.gene50755:intron | 55.0% |
| !! | GCTTGGTTTTCAGCAGGTGG+TGG | + | chr4.3:34399923-34399942 | None:intergenic | 55.0% |
| !! | TGGTTATGGGTTGGTGCAGG+TGG | + | chr4.3:34400061-34400080 | None:intergenic | 55.0% |
| !! | TGGTTTTCAGCAGGTGGTGG+AGG | + | chr4.3:34399920-34399939 | None:intergenic | 55.0% |
| !!! | GTGGCTTGGTTTTCAGCAGG+TGG | + | chr4.3:34399926-34399945 | None:intergenic | 55.0% |
| AGGGTCTGGTCAGGCATGTC+AGG | - | chr4.3:34397721-34397740 | MS.gene50755:intron | 60.0% | |
| GACAGTGGTGGTATGGGTGG+TGG | + | chr4.3:34399966-34399985 | None:intergenic | 60.0% | |
| GCAGGGACTGTTGCCAGCAA+TGG | - | chr4.3:34398817-34398836 | MS.gene50755:intron | 60.0% | |
| GCGGTGGTCTGTCACTATGG+TGG | - | chr4.3:34396492-34396511 | MS.gene50755:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 34396477 | 34400405 | 34396477 | ID=MS.gene50755 |
| chr4.3 | mRNA | 34396477 | 34400405 | 34396477 | ID=MS.gene50755.t1;Parent=MS.gene50755 |
| chr4.3 | exon | 34399460 | 34400405 | 34399460 | ID=MS.gene50755.t1.exon1;Parent=MS.gene50755.t1 |
| chr4.3 | CDS | 34399460 | 34400405 | 34399460 | ID=cds.MS.gene50755.t1;Parent=MS.gene50755.t1 |
| chr4.3 | exon | 34399190 | 34399333 | 34399190 | ID=MS.gene50755.t1.exon2;Parent=MS.gene50755.t1 |
| chr4.3 | CDS | 34399190 | 34399333 | 34399190 | ID=cds.MS.gene50755.t1;Parent=MS.gene50755.t1 |
| chr4.3 | exon | 34396477 | 34396712 | 34396477 | ID=MS.gene50755.t1.exon3;Parent=MS.gene50755.t1 |
| chr4.3 | CDS | 34396477 | 34396712 | 34396477 | ID=cds.MS.gene50755.t1;Parent=MS.gene50755.t1 |
| Gene Sequence |
| Protein sequence |
