Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51087.t1 | XP_003616703.1 | 95 | 516 | 26 | 0 | 1 | 516 | 1 | 516 | 2.60E-258 | 901 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51087.t1 | Q8L5Z7 | 64.4 | 489 | 156 | 5 | 43 | 514 | 96 | 583 | 1.3e-162 | 574.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51087.t1 | G7K781 | 95.0 | 516 | 26 | 0 | 1 | 516 | 1 | 516 | 1.9e-258 | 901.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene51087 | 0.849717 | 2.70E-60 | -1.69E-46 |
| MS.gene051233 | MS.gene51087 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene51087 | 0.817618 | 3.00E-52 | -1.69E-46 |
| MS.gene052296 | MS.gene51087 | 0.826779 | 2.25E-54 | -1.69E-46 |
| MS.gene052818 | MS.gene51087 | -0.806364 | 8.53E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene51087 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene51087 | 0.80731 | 5.38E-50 | -1.69E-46 |
| MS.gene055424 | MS.gene51087 | 0.80017 | 1.63E-48 | -1.69E-46 |
| MS.gene056752 | MS.gene51087 | 0.815106 | 1.10E-51 | -1.69E-46 |
| MS.gene056992 | MS.gene51087 | 0.808249 | 3.40E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene51087 | 0.85406 | 1.58E-61 | -1.69E-46 |
| MS.gene058074 | MS.gene51087 | 0.865161 | 7.22E-65 | -1.69E-46 |
| MS.gene058638 | MS.gene51087 | 0.800404 | 1.46E-48 | -1.69E-46 |
| MS.gene058639 | MS.gene51087 | 0.800882 | 1.17E-48 | -1.69E-46 |
| MS.gene059171 | MS.gene51087 | 0.823132 | 1.63E-53 | -1.69E-46 |
| MS.gene06011 | MS.gene51087 | 0.803523 | 3.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51087.t1 | MTR_5g083370 | 97.674 | 516 | 12 | 0 | 1 | 516 | 1 | 516 | 0.0 | 1036 |
| MS.gene51087.t1 | MTR_5g073280 | 61.792 | 547 | 164 | 8 | 13 | 516 | 21 | 565 | 0.0 | 635 |
| MS.gene51087.t1 | MTR_1g059650 | 25.874 | 429 | 260 | 12 | 90 | 513 | 28 | 403 | 2.91e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51087.t1 | AT5G58440 | 67.360 | 481 | 139 | 5 | 48 | 511 | 101 | 580 | 0.0 | 646 |
| MS.gene51087.t1 | AT5G07120 | 65.720 | 493 | 151 | 5 | 41 | 516 | 81 | 572 | 0.0 | 639 |
| MS.gene51087.t1 | AT5G07120 | 65.720 | 493 | 151 | 5 | 41 | 516 | 81 | 572 | 0.0 | 639 |
| MS.gene51087.t1 | AT5G07120 | 65.812 | 468 | 142 | 5 | 41 | 491 | 81 | 547 | 0.0 | 606 |
| MS.gene51087.t1 | AT5G06140 | 25.799 | 438 | 261 | 12 | 77 | 504 | 9 | 392 | 1.48e-22 | 100 |
Find 139 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGAAGATAAGGAGTTTA+TGG | 0.131203 | 5.1:+65706601 | MS.gene51087:CDS |
| TGGTGTAAGGAGGAGGTTTC+GGG | 0.165443 | 5.1:+65705711 | MS.gene51087:CDS |
| GGCTGCCACGGCAGCTGTTT+GGG | 0.165894 | 5.1:+65706447 | MS.gene51087:CDS |
| GAGAAGTATCTGAGGAAATT+AGG | 0.188004 | 5.1:+65706308 | MS.gene51087:CDS |
| GTTGCTTCATCCAGAATATT+TGG | 0.216818 | 5.1:+65707977 | MS.gene51087:CDS |
| AATGAATTGAACGGTGATTT+AGG | 0.226921 | 5.1:-65705454 | None:intergenic |
| AGGCTGCCACGGCAGCTGTT+TGG | 0.229002 | 5.1:+65706446 | MS.gene51087:CDS |
| ATCCGATTCGATTCAGATTT+CGG | 0.277980 | 5.1:+65705585 | MS.gene51087:CDS |
| AGCTGTTTGGGGCGGAGAGT+GGG | 0.297842 | 5.1:+65706459 | MS.gene51087:CDS |
| CGGTGGTTGTTGAACGTTGC+CGG | 0.302336 | 5.1:-65705425 | None:intergenic |
| CTTGTCTCCACCAAATATTC+TGG | 0.315427 | 5.1:-65707987 | None:intergenic |
| CAGCTGTTTGGGGCGGAGAG+TGG | 0.335447 | 5.1:+65706458 | MS.gene51087:CDS |
| TACGTTGTCGGAGCGGTTAT+CGG | 0.335566 | 5.1:+65705741 | MS.gene51087:CDS |
| AACAATCTGTTAGTAATGAT+TGG | 0.339972 | 5.1:+65706555 | MS.gene51087:CDS |
| TTGGTGTAAGGAGGAGGTTT+CGG | 0.349103 | 5.1:+65705710 | MS.gene51087:CDS |
| AGCTAGCTTCTTTACATTCA+CGG | 0.377360 | 5.1:+65707939 | MS.gene51087:CDS |
| AGAAGTATCTGAGGAAATTA+GGG | 0.377649 | 5.1:+65706309 | MS.gene51087:CDS |
| AAGGAGGAGGTTTCGGGAGG+TGG | 0.379579 | 5.1:+65705717 | MS.gene51087:CDS |
| AAACTTTGCAGGAAAATAAT+AGG | 0.382071 | 5.1:+65710030 | MS.gene51087:intron |
| TTATCGTGGTTATGTGATTC+CGG | 0.384264 | 5.1:+65705768 | MS.gene51087:CDS |
| ACAATCTGTTAGTAATGATT+GGG | 0.384603 | 5.1:+65706556 | MS.gene51087:CDS |
| GTAACGAACTCGCTTGTTCC+AGG | 0.386518 | 5.1:+65705634 | MS.gene51087:CDS |
| AACTCGAATCAAGCCGGATC+CGG | 0.388623 | 5.1:+65705550 | MS.gene51087:CDS |
| AACGTTGCCGGAGGAGTTAT+CGG | 0.389957 | 5.1:-65705413 | None:intergenic |
| TTAGGGTTGCATCCTGTGAT+TGG | 0.408182 | 5.1:+65706326 | MS.gene51087:CDS |
| ATGACTCCATTTCATCGTCT+TGG | 0.409874 | 5.1:-65705360 | None:intergenic |
| TTCGGTTCCCGATCCGGATC+CGG | 0.411031 | 5.1:-65705563 | None:intergenic |
| GCGAGGGTTTGTTGTCAATC+AGG | 0.412246 | 5.1:+65710106 | MS.gene51087:CDS |
| ATCGGATTCGGTTCCCGATC+CGG | 0.414736 | 5.1:-65705569 | None:intergenic |
| TGACTCCATTTCATCGTCTT+GGG | 0.419261 | 5.1:-65705359 | None:intergenic |
| TCGGGAGGTGGTTACGTTGT+CGG | 0.422008 | 5.1:+65705729 | MS.gene51087:CDS |
| GGAGAAGAAGGATAAGTTGA+TGG | 0.424046 | 5.1:+65706622 | MS.gene51087:CDS |
| TAAGGAGTTTATGGAGAAGA+AGG | 0.434834 | 5.1:+65706610 | MS.gene51087:CDS |
| AACGGTGATTTAGGACTTTG+CGG | 0.435214 | 5.1:-65705445 | None:intergenic |
| CGGAGTTTGGTGTAAGGAGG+AGG | 0.443749 | 5.1:+65705704 | MS.gene51087:CDS |
| GGAGTTATCGGCGCCGTTGT+CGG | 0.444282 | 5.1:-65705401 | None:intergenic |
| AATCTGAATCGAATCGGATT+CGG | 0.449392 | 5.1:-65705581 | None:intergenic |
| AATTCGAATCTCAAAGAGTA+AGG | 0.452607 | 5.1:+65707583 | MS.gene51087:CDS |
| TACACAAACAATCAAACATC+TGG | 0.453598 | 5.1:+65707671 | MS.gene51087:CDS |
| GATGCAGAAGGAGGAGTTTG+TGG | 0.457480 | 5.1:+65706265 | MS.gene51087:CDS |
| GGTGAAACAATGGGTGAGCT+AGG | 0.463965 | 5.1:+65707516 | MS.gene51087:CDS |
| TGGCGTCAAGGATGCTTGAT+GGG | 0.464255 | 5.1:+65706417 | MS.gene51087:CDS |
| AATCAAGCCGGATCCGGATC+GGG | 0.465368 | 5.1:+65705556 | MS.gene51087:CDS |
| AAAGTGGAAGGGATTTGCTT+AGG | 0.466015 | 5.1:+65706516 | MS.gene51087:CDS |
| AAGCGCGAAGAACGTGATCT+TGG | 0.468626 | 5.1:-65705336 | None:intergenic |
| GTGGCGTCAAGGATGCTTGA+TGG | 0.468981 | 5.1:+65706416 | MS.gene51087:CDS |
| TAGGGTTGCATCCTGTGATT+GGG | 0.469279 | 5.1:+65706327 | MS.gene51087:CDS |
| CGCTTCCCAAGACGATGAAA+TGG | 0.471624 | 5.1:+65705354 | MS.gene51087:CDS |
| ATTGGTTGTTGAAGAAGATA+AGG | 0.471684 | 5.1:+65706592 | MS.gene51087:CDS |
| GTCAGCAAAAGCATTGTTGA+TGG | 0.489842 | 5.1:-65707876 | None:intergenic |
| GCTGCCACGGCAGCTGTTTG+GGG | 0.491006 | 5.1:+65706448 | MS.gene51087:CDS |
| ACTTAGCAATGTTTCTCAGC+AGG | 0.492076 | 5.1:+65706658 | MS.gene51087:CDS |
| GCTGTTTGGGGCGGAGAGTG+GGG | 0.492352 | 5.1:+65706460 | MS.gene51087:CDS |
| TTATCTTCTTCAACAACCAA+TGG | 0.498912 | 5.1:-65706590 | None:intergenic |
| TTTGAATGATGTGGCTCAGC+CGG | 0.506966 | 5.1:+65706490 | MS.gene51087:CDS |
| AACCGAAATCTGAATCGAAT+CGG | 0.507244 | 5.1:-65705587 | None:intergenic |
| GGAGCAGAGGAGATTAGCGT+TGG | 0.508817 | 5.1:+65706286 | MS.gene51087:CDS |
| GGCAGGCTATGCAGAGAAGA+TGG | 0.512741 | 5.1:+65710229 | MS.gene51087:intron |
| CTGCAGCTGTCAAAGCAAGC+AGG | 0.519113 | 5.1:+65707631 | MS.gene51087:CDS |
| GCAAGACATGGGTGAAACAA+TGG | 0.520277 | 5.1:+65707506 | MS.gene51087:CDS |
| CAAGACATGGGTGAAACAAT+GGG | 0.522777 | 5.1:+65707507 | MS.gene51087:CDS |
| TCCTCACTCTTCCCAATCAC+AGG | 0.526809 | 5.1:-65706338 | None:intergenic |
| TTGAAAGAATTGACAAGGAA+AGG | 0.529294 | 5.1:+65710060 | MS.gene51087:CDS |
| GATAAACTCCACGAATACCT+TGG | 0.530791 | 5.1:+65707842 | MS.gene51087:CDS |
| ATAAACTCCACGAATACCTT+GGG | 0.530869 | 5.1:+65707843 | MS.gene51087:CDS |
| GTTACCTCTTGCTCCTCTTG+AGG | 0.531300 | 5.1:-65705616 | None:intergenic |
| GTGGCTCAGCCGGCGAAAAG+TGG | 0.533089 | 5.1:+65706500 | MS.gene51087:CDS |
| GAATCAAGCCGGATCCGGAT+CGG | 0.536739 | 5.1:+65705555 | MS.gene51087:CDS |
| CGGAGAAAAGTTCGGTAGAG+AGG | 0.538061 | 5.1:+65705797 | MS.gene51087:CDS |
| CTCAGCCGGCGAAAAGTGGA+AGG | 0.538183 | 5.1:+65706504 | MS.gene51087:CDS |
| ATGGGGCGGTGAGGCTGCCA+CGG | 0.539166 | 5.1:+65706435 | MS.gene51087:CDS |
| AAGATTGCTTCAGCGTAAGA+AGG | 0.540494 | 5.1:-65705487 | None:intergenic |
| GGTTGTTGATTTGAATGATG+TGG | 0.541262 | 5.1:+65706481 | MS.gene51087:CDS |
| TAGAGAGTATGAACGAATCA+AGG | 0.545450 | 5.1:+65708081 | MS.gene51087:CDS |
| TGTCAAGTTTCAGCAAGACA+TGG | 0.545641 | 5.1:+65707494 | MS.gene51087:CDS |
| TAGGGTTTGATCGTGACCGT+TGG | 0.545881 | 5.1:-65705524 | None:intergenic |
| GTTGATGAGGACGACGGATG+TGG | 0.546141 | 5.1:+65706397 | MS.gene51087:CDS |
| TTATGTGATTCCGGTGAGGC+CGG | 0.549014 | 5.1:+65705777 | MS.gene51087:CDS |
| TCCGCCCCAAACAGCTGCCG+TGG | 0.549263 | 5.1:-65706452 | None:intergenic |
| GGTGAGGCCGGAGAAAAGTT+CGG | 0.551056 | 5.1:+65705789 | MS.gene51087:CDS |
| GAAAAGTTCGGTAGAGAGGA+AGG | 0.555027 | 5.1:+65705801 | MS.gene51087:CDS |
| AGGAGGAGTTTGTGGAGCAG+AGG | 0.558001 | 5.1:+65706273 | MS.gene51087:CDS |
| GCATTGTCCCAAGGTATTCG+TGG | 0.559449 | 5.1:-65707850 | None:intergenic |
| GTCAAGGATGCTTGATGGGG+CGG | 0.562029 | 5.1:+65706421 | MS.gene51087:CDS |
| GCCACGGCAGCTGTTTGGGG+CGG | 0.564908 | 5.1:+65706451 | MS.gene51087:CDS |
| CTGTCAACAATGCACTTGAT+CGG | 0.565466 | 5.1:-65707898 | None:intergenic |
| AACGGCGCCGATAACTCCTC+CGG | 0.568830 | 5.1:+65705406 | MS.gene51087:CDS |
| AGCACTCTCAGTTACTCTAA+CGG | 0.577710 | 5.1:-65708044 | None:intergenic |
| GCTTCATCCAGAATATTTGG+TGG | 0.579181 | 5.1:+65707980 | MS.gene51087:CDS |
| AAGGGAAGTTGCCGTTGATG+AGG | 0.580166 | 5.1:+65706384 | MS.gene51087:CDS |
| TTCGGTTTCTGATCCTCAAG+AGG | 0.582017 | 5.1:+65705603 | MS.gene51087:CDS |
| AGAGAAGATGGCTGCTGTGT+GGG | 0.582156 | 5.1:+65710241 | MS.gene51087:CDS |
| CGCCGTTGTCGGTGTCGTCG+TGG | 0.583473 | 5.1:-65705390 | None:intergenic |
| GTCAAGTTTCAGCAAGACAT+GGG | 0.591750 | 5.1:+65707495 | MS.gene51087:CDS |
| AACAATGGGTGAGCTAGGGT+TGG | 0.592568 | 5.1:+65707521 | MS.gene51087:CDS |
| TTGGGGAGGTGCTAAGCCAT+TGG | 0.595216 | 5.1:+65706574 | MS.gene51087:CDS |
| TGCTGTGTGGGAAAAGCTTG+CGG | 0.596149 | 5.1:+65710253 | MS.gene51087:CDS |
| ACTTTCAAAACATGCTGCGA+GGG | 0.598205 | 5.1:+65710090 | MS.gene51087:CDS |
| TTCACTTCATTCGACACCAA+CGG | 0.599087 | 5.1:+65705508 | MS.gene51087:CDS |
| TATTTGGTGGAGACAAGTCT+AGG | 0.601151 | 5.1:+65707993 | MS.gene51087:CDS |
| TGTAAGGAGGAGGTTTCGGG+AGG | 0.601303 | 5.1:+65705714 | MS.gene51087:CDS |
| GTTGTCGGAGCGGTTATCGG+AGG | 0.601385 | 5.1:+65705744 | MS.gene51087:CDS |
| GGATGCTTGATGGGGCGGTG+AGG | 0.604410 | 5.1:+65706426 | MS.gene51087:CDS |
| AATCGGAGTTTGGTGTAAGG+AGG | 0.604994 | 5.1:+65705701 | MS.gene51087:CDS |
| GGCGTCAAGGATGCTTGATG+GGG | 0.610367 | 5.1:+65706418 | MS.gene51087:CDS |
| ACATCCGTCGTCCTCATCAA+CGG | 0.610443 | 5.1:-65706395 | None:intergenic |
| ATTCGAATCTCAAAGAGTAA+GGG | 0.612875 | 5.1:+65707584 | MS.gene51087:CDS |
| CTAGAAAACTCGAATCAAGC+CGG | 0.614203 | 5.1:+65705544 | MS.gene51087:CDS |
| CGGTTATCGGAGGTTTATCG+TGG | 0.619246 | 5.1:+65705754 | MS.gene51087:CDS |
| GGACGACGGATGTGGCGTCA+AGG | 0.620316 | 5.1:+65706405 | MS.gene51087:CDS |
| CTCCACGACGACACCGACAA+CGG | 0.620443 | 5.1:+65705388 | MS.gene51087:CDS |
| GTGAAACAATGGGTGAGCTA+GGG | 0.620469 | 5.1:+65707517 | MS.gene51087:CDS |
| TGGTTGTTGAACGTTGCCGG+AGG | 0.621381 | 5.1:-65705422 | None:intergenic |
| GACTTTCAAAACATGCTGCG+AGG | 0.622052 | 5.1:+65710089 | MS.gene51087:CDS |
| GTATGATAACTACTTCCACC+TGG | 0.623384 | 5.1:-65705652 | None:intergenic |
| GTGGAGACAAGTCTAGGATG+CGG | 0.623924 | 5.1:+65707999 | MS.gene51087:CDS |
| TGATCCTCAAGAGGAGCAAG+AGG | 0.633181 | 5.1:+65705612 | MS.gene51087:CDS |
| CTATCAGGTGATGCAGAAGG+AGG | 0.634617 | 5.1:+65706256 | MS.gene51087:intron |
| ATTCTATCAGGTGATGCAGA+AGG | 0.635217 | 5.1:+65706253 | MS.gene51087:intron |
| TGTCTTGCTGAAACTTGACA+AGG | 0.636299 | 5.1:-65707491 | None:intergenic |
| GTCTTGCTGAAACTTGACAA+GGG | 0.646463 | 5.1:-65707490 | None:intergenic |
| CAATCTGTTAGTAATGATTG+GGG | 0.646740 | 5.1:+65706557 | MS.gene51087:CDS |
| GGATCGAGGAATGAATTGAA+CGG | 0.649991 | 5.1:-65705463 | None:intergenic |
| TCAGCCGGCGAAAAGTGGAA+GGG | 0.652000 | 5.1:+65706505 | MS.gene51087:CDS |
| ATTGCTTCAGCGTAAGAAGG+AGG | 0.654082 | 5.1:-65705484 | None:intergenic |
| TGATGGCTAGCATTGTCCCA+AGG | 0.654220 | 5.1:-65707859 | None:intergenic |
| TGAGCTTGAAAGAATTGACA+AGG | 0.655714 | 5.1:+65710055 | MS.gene51087:CDS |
| AGGTGGTTACGTTGTCGGAG+CGG | 0.656214 | 5.1:+65705734 | MS.gene51087:CDS |
| CGTTGTCGGTGTCGTCGTGG+AGG | 0.663809 | 5.1:-65705387 | None:intergenic |
| CAGCGTAAGAAGGAGGATCG+AGG | 0.672129 | 5.1:-65705477 | None:intergenic |
| TAGCGTTGGAGAAGTATCTG+AGG | 0.672262 | 5.1:+65706300 | MS.gene51087:CDS |
| CAGAGAAGATGGCTGCTGTG+TGG | 0.678220 | 5.1:+65710240 | MS.gene51087:CDS |
| ACGAACTCGCTTGTTCCAGG+TGG | 0.679084 | 5.1:+65705637 | MS.gene51087:CDS |
| TCTGTTAGTAATGATTGGGG+AGG | 0.700339 | 5.1:+65706560 | MS.gene51087:CDS |
| TCCTGTGATTGGGAAGAGTG+AGG | 0.720504 | 5.1:+65706337 | MS.gene51087:CDS |
| GTGGTTATGTGATTCCGGTG+AGG | 0.721489 | 5.1:+65705773 | MS.gene51087:CDS |
| GGTGATTTAGGACTTTGCGG+TGG | 0.721823 | 5.1:-65705442 | None:intergenic |
| GTTGCCGTTGATGAGGACGA+CGG | 0.733554 | 5.1:+65706391 | MS.gene51087:CDS |
| ATACGTATCTGATTACCACG+AGG | 0.806114 | 5.1:+65705671 | MS.gene51087:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGTTAATTACAATAAA+TGG | - | chr5.1:65706171-65706190 | None:intergenic | 10.0% |
| !! | ATTTACATATTATTTCAAAA+AGG | - | chr5.1:65709990-65710009 | None:intergenic | 10.0% |
| !!! | AAAAAGAAAAAATAGTTTTA+AGG | + | chr5.1:65709947-65709966 | MS.gene51087:intron | 10.0% |
| !!! | AAAAATACATTTTTTGTATT+CGG | + | chr5.1:65708110-65708129 | MS.gene51087:intron | 10.0% |
| !! | TATAGACAAATGAATATATA+TGG | - | chr5.1:65708259-65708278 | None:intergenic | 15.0% |
| !! | TCATCATACAATTATATAAT+TGG | - | chr5.1:65707742-65707761 | None:intergenic | 15.0% |
| !!! | ATAGAAATACAGATTTTAAA+TGG | - | chr5.1:65709923-65709942 | None:intergenic | 15.0% |
| !! | AAGTACATAACAAGTATAAA+AGG | + | chr5.1:65709098-65709117 | MS.gene51087:intron | 20.0% |
| !! | AATAATATCAAGTGTAAATG+TGG | + | chr5.1:65710007-65710026 | MS.gene51087:intron | 20.0% |
| !! | ACTAAACATGATATAATAGT+CGG | + | chr5.1:65707266-65707285 | MS.gene51087:intron | 20.0% |
| !! | CAAAATATTGATATTAAGCA+CGG | - | chr5.1:65706230-65706249 | None:intergenic | 20.0% |
| !! | GACAATAATCTTCATAATAA+TGG | - | chr5.1:65708286-65708305 | None:intergenic | 20.0% |
| !! | TCAAAAATCAAAATCACTAA+AGG | - | chr5.1:65709734-65709753 | None:intergenic | 20.0% |
| !! | TTAATTACAATAAATGGTGT+CGG | - | chr5.1:65706165-65706184 | None:intergenic | 20.0% |
| !! | TTATCAAAATCATCAAATAG+TGG | + | chr5.1:65708900-65708919 | MS.gene51087:intron | 20.0% |
| !! | TTTACAAATGCATCAAAATA+TGG | - | chr5.1:65708639-65708658 | None:intergenic | 20.0% |
| !!! | AAACATTGGATTTTACATAT+TGG | - | chr5.1:65708760-65708779 | None:intergenic | 20.0% |
| !!! | AATATTTTGCATATTCTATC+AGG | + | chr5.1:65706241-65706260 | MS.gene51087:intron | 20.0% |
| !!! | ACAAGATTTTAAATGATCAT+TGG | - | chr5.1:65707177-65707196 | None:intergenic | 20.0% |
| !!! | ATCATTTAAAATCTTGTTTG+TGG | + | chr5.1:65707180-65707199 | MS.gene51087:intron | 20.0% |
| !!! | ATTCTGGTTTTTTAAAACAT+TGG | - | chr5.1:65708774-65708793 | None:intergenic | 20.0% |
| !!! | GTAGAATCAATTATCAATTT+TGG | + | chr5.1:65706054-65706073 | MS.gene51087:intron | 20.0% |
| !!! | TCTTTGATAATCTAATTAGA+TGG | - | chr5.1:65708466-65708485 | None:intergenic | 20.0% |
| !!! | TTTTATACTTGTTATGTACT+TGG | - | chr5.1:65709099-65709118 | None:intergenic | 20.0% |
| ! | AAACTTTGCAGGAAAATAAT+AGG | + | chr5.1:65710030-65710049 | MS.gene51087:intron | 25.0% |
| ! | AAATCATAAGATAGGTTCAA+AGG | - | chr5.1:65709811-65709830 | None:intergenic | 25.0% |
| ! | AACAATCTGTTAGTAATGAT+TGG | + | chr5.1:65706555-65706574 | MS.gene51087:CDS | 25.0% |
| ! | ACAATCTGTTAGTAATGATT+GGG | + | chr5.1:65706556-65706575 | MS.gene51087:CDS | 25.0% |
| ! | AGTAAAATGTAGATTCATTG+TGG | + | chr5.1:65706751-65706770 | MS.gene51087:intron | 25.0% |
| ! | CCTTTATAGATGGATAAAAA+GGG | - | chr5.1:65709522-65709541 | None:intergenic | 25.0% |
| ! | CTCAATGATCAATAAAACAT+TGG | - | chr5.1:65708989-65709008 | None:intergenic | 25.0% |
| ! | CTTTATAGATGGATAAAAAG+GGG | - | chr5.1:65709521-65709540 | None:intergenic | 25.0% |
| ! | GCTTTCATAAATCATAAGAT+AGG | - | chr5.1:65709819-65709838 | None:intergenic | 25.0% |
| ! | TATGTTAGTTGCAAATTAGT+CGG | + | chr5.1:65705841-65705860 | MS.gene51087:intron | 25.0% |
| ! | TGATGCATTTAATTCAAAGT+AGG | + | chr5.1:65706842-65706861 | MS.gene51087:intron | 25.0% |
| ! | TGTGTCAAATTATCAAATAG+TGG | - | chr5.1:65708366-65708385 | None:intergenic | 25.0% |
| !! | ATTTTACTTCTTTGATTGCT+AGG | + | chr5.1:65707422-65707441 | MS.gene51087:intron | 25.0% |
| !! | TTTTACTTCTTTGATTGCTA+GGG | + | chr5.1:65707423-65707442 | MS.gene51087:intron | 25.0% |
| AAAGGTTCATAACCACAATA+TGG | + | chr5.1:65706886-65706905 | MS.gene51087:intron | 30.0% | |
| AACTAATCCAAGTGTATGTT+TGG | - | chr5.1:65706097-65706116 | None:intergenic | 30.0% | |
| AAGAAAAGAGAAGATAAACG+AGG | - | chr5.1:65710136-65710155 | None:intergenic | 30.0% | |
| AAGGTTCATAACCACAATAT+GGG | + | chr5.1:65706887-65706906 | MS.gene51087:intron | 30.0% | |
| AATGAATTGAACGGTGATTT+AGG | - | chr5.1:65705457-65705476 | None:intergenic | 30.0% | |
| AATTCGAATCTCAAAGAGTA+AGG | + | chr5.1:65707583-65707602 | MS.gene51087:CDS | 30.0% | |
| AATTGCATTGCATTATAGAG+AGG | - | chr5.1:65708560-65708579 | None:intergenic | 30.0% | |
| ACAATTCACTAATCCAATCA+GGG | + | chr5.1:65709027-65709046 | MS.gene51087:intron | 30.0% | |
| AGAAAACACATACATAACCA+TGG | + | chr5.1:65709607-65709626 | MS.gene51087:intron | 30.0% | |
| AGAAAAGAGAAGATAAACGA+GGG | - | chr5.1:65710135-65710154 | None:intergenic | 30.0% | |
| AGACAGCTAAAGATTATACT+TGG | - | chr5.1:65707782-65707801 | None:intergenic | 30.0% | |
| AGTGCTTAAAATTTCAACAC+AGG | + | chr5.1:65709144-65709163 | MS.gene51087:intron | 30.0% | |
| ATCCAAGGTATAACTTAACA+TGG | + | chr5.1:65709212-65709231 | MS.gene51087:intron | 30.0% | |
| ATCCATGTTAAGTTATACCT+TGG | - | chr5.1:65709217-65709236 | None:intergenic | 30.0% | |
| ATGTGATGTTAGTGAAAAGT+AGG | + | chr5.1:65706931-65706950 | MS.gene51087:intron | 30.0% | |
| ATGTTGATATGTATGCTGAA+GGG | - | chr5.1:65708198-65708217 | None:intergenic | 30.0% | |
| ATTCGAATCTCAAAGAGTAA+GGG | + | chr5.1:65707584-65707603 | MS.gene51087:CDS | 30.0% | |
| ATTGGTTGTTGAAGAAGATA+AGG | + | chr5.1:65706592-65706611 | MS.gene51087:CDS | 30.0% | |
| CAATCTGTTAGTAATGATTG+GGG | + | chr5.1:65706557-65706576 | MS.gene51087:CDS | 30.0% | |
| GCCTTTATAGATGGATAAAA+AGG | - | chr5.1:65709523-65709542 | None:intergenic | 30.0% | |
| GTCTTTATAGACAAGTTTCA+TGG | + | chr5.1:65708580-65708599 | MS.gene51087:intron | 30.0% | |
| TACAATTCACTAATCCAATC+AGG | + | chr5.1:65709026-65709045 | MS.gene51087:intron | 30.0% | |
| TACACAAACAATCAAACATC+TGG | + | chr5.1:65707671-65707690 | MS.gene51087:CDS | 30.0% | |
| TACCAGTCAAATTTATACCA+GGG | - | chr5.1:65708510-65708529 | None:intergenic | 30.0% | |
| TAGATATGCCTAAAATGATC+AGG | + | chr5.1:65709458-65709477 | MS.gene51087:intron | 30.0% | |
| TATGTTGATATGTATGCTGA+AGG | - | chr5.1:65708199-65708218 | None:intergenic | 30.0% | |
| TCATCAATCAATAGCTGATT+TGG | + | chr5.1:65708697-65708716 | MS.gene51087:intron | 30.0% | |
| TCCTAACCTCAAATTAACTT+TGG | - | chr5.1:65707049-65707068 | None:intergenic | 30.0% | |
| TGAAGAAGATAAGGAGTTTA+TGG | + | chr5.1:65706601-65706620 | MS.gene51087:CDS | 30.0% | |
| TGCAAGCATACAATATAAGT+TGG | + | chr5.1:65709057-65709076 | MS.gene51087:intron | 30.0% | |
| TTATCTTCTTCAACAACCAA+TGG | - | chr5.1:65706593-65706612 | None:intergenic | 30.0% | |
| TTGAAAGAATTGACAAGGAA+AGG | + | chr5.1:65710060-65710079 | MS.gene51087:CDS | 30.0% | |
| TTGTGGTGTAATCAAGTATT+AGG | + | chr5.1:65707197-65707216 | MS.gene51087:intron | 30.0% | |
| ! | ATGGTAATGCAATTCTTCAA+AGG | - | chr5.1:65707356-65707375 | None:intergenic | 30.0% |
| ! | CCCTTTTTATCCATCTATAA+AGG | + | chr5.1:65709519-65709538 | MS.gene51087:intron | 30.0% |
| ! | GTTTATCTTCTCTTTTCTTC+AGG | + | chr5.1:65710137-65710156 | MS.gene51087:intron | 30.0% |
| ! | TAATGTTTTATGTGTGTTGC+AGG | + | chr5.1:65707820-65707839 | MS.gene51087:intron | 30.0% |
| ! | TCAAAGTAGGTTTGAAGTTA+GGG | + | chr5.1:65706855-65706874 | MS.gene51087:intron | 30.0% |
| ! | TCCAAAGTTAATTTGAGGTT+AGG | + | chr5.1:65707045-65707064 | MS.gene51087:intron | 30.0% |
| ! | TGGAACTGAATGAATTGTTT+TGG | + | chr5.1:65707387-65707406 | MS.gene51087:intron | 30.0% |
| ! | TTAGCTCCAAAGTTAATTTG+AGG | + | chr5.1:65707040-65707059 | MS.gene51087:intron | 30.0% |
| ! | TTCAAAGTAGGTTTGAAGTT+AGG | + | chr5.1:65706854-65706873 | MS.gene51087:intron | 30.0% |
| ! | TTGGATTTTACATAACGAGA+TGG | - | chr5.1:65708970-65708989 | None:intergenic | 30.0% |
| ! | TTTTCACTAACATCACATTG+CGG | - | chr5.1:65706929-65706948 | None:intergenic | 30.0% |
| !! | AGAAGTATCTGAGGAAATTA+GGG | + | chr5.1:65706309-65706328 | MS.gene51087:CDS | 30.0% |
| !! | AGTTTGAGACTTCATTTTGT+TGG | - | chr5.1:65709585-65709604 | None:intergenic | 30.0% |
| !! | ATACAATATAAGTTGGTGAG+TGG | + | chr5.1:65709064-65709083 | MS.gene51087:intron | 30.0% |
| !! | ATACTTGTTATGTACTTGGT+TGG | - | chr5.1:65709095-65709114 | None:intergenic | 30.0% |
| !! | ATGAGTCTTTAACTTGATTG+TGG | + | chr5.1:65709424-65709443 | MS.gene51087:intron | 30.0% |
| !! | GTTTGAGACTTCATTTTGTT+GGG | - | chr5.1:65709584-65709603 | None:intergenic | 30.0% |
| !! | TCTAGTGTCATTGTGTTTTA+TGG | + | chr5.1:65707310-65707329 | MS.gene51087:intron | 30.0% |
| !!! | CATATTTTTGCTTTTAGAGC+TGG | + | chr5.1:65708215-65708234 | MS.gene51087:intron | 30.0% |
| !!! | CTGAATGAATTGTTTTGGAA+TGG | + | chr5.1:65707392-65707411 | MS.gene51087:intron | 30.0% |
| !!! | GAAGTTAGGGTTTTAGAAAA+AGG | + | chr5.1:65706868-65706887 | MS.gene51087:intron | 30.0% |
| AAAAAAGAATTGCGTCTGCA+TGG | + | chr5.1:65707074-65707093 | MS.gene51087:intron | 35.0% | |
| AACCGAAATCTGAATCGAAT+CGG | - | chr5.1:65705590-65705609 | None:intergenic | 35.0% | |
| AACTTGACTTCTAAATCTGC+TGG | + | chr5.1:65708731-65708750 | MS.gene51087:intron | 35.0% | |
| AATCGAAGTTACAGATGCTA+AGG | - | chr5.1:65708147-65708166 | None:intergenic | 35.0% | |
| AATCTGAATCGAATCGGATT+CGG | - | chr5.1:65705584-65705603 | None:intergenic | 35.0% | |
| AATGGAACCAAACATACACT+TGG | + | chr5.1:65706087-65706106 | MS.gene51087:intron | 35.0% | |
| ACTTATCCATAAGGTTATGC+AGG | - | chr5.1:65708436-65708455 | None:intergenic | 35.0% | |
| ACTTGAATAGAATGCGAGTT+TGG | + | chr5.1:65709391-65709410 | MS.gene51087:intron | 35.0% | |
| ATAAACTCCACGAATACCTT+GGG | + | chr5.1:65707843-65707862 | MS.gene51087:CDS | 35.0% | |
| ATCGAAGTTACAGATGCTAA+GGG | - | chr5.1:65708146-65708165 | None:intergenic | 35.0% | |
| ATGAATCAAATGGCAATGAG+GGG | + | chr5.1:65709679-65709698 | MS.gene51087:intron | 35.0% | |
| ATTCAGATATGACCCAAGTA+TGG | - | chr5.1:65707132-65707151 | None:intergenic | 35.0% | |
| CAAAATCACTAAAGGCCAAA+GGG | - | chr5.1:65709726-65709745 | None:intergenic | 35.0% | |
| CAACTTCAAATTGTGATGCT+AGG | + | chr5.1:65709845-65709864 | MS.gene51087:intron | 35.0% | |
| CAATAACCTGCATAACCTTA+TGG | + | chr5.1:65708427-65708446 | MS.gene51087:intron | 35.0% | |
| CAGCTAAAGATTATACTTGG+AGG | - | chr5.1:65707779-65707798 | None:intergenic | 35.0% | |
| CATAACAAGTATAAAAGGCG+AGG | + | chr5.1:65709103-65709122 | MS.gene51087:intron | 35.0% | |
| CCAAATCAGCTATTACATTC+TGG | - | chr5.1:65708790-65708809 | None:intergenic | 35.0% | |
| CCAGAATGTAATAGCTGATT+TGG | + | chr5.1:65708787-65708806 | MS.gene51087:intron | 35.0% | |
| CGCATTCTATTCAAGTCTAT+AGG | - | chr5.1:65709387-65709406 | None:intergenic | 35.0% | |
| CTACCAGTCAAATTTATACC+AGG | - | chr5.1:65708511-65708530 | None:intergenic | 35.0% | |
| CTTGAATAGAATGCGAGTTT+GGG | + | chr5.1:65709392-65709411 | MS.gene51087:intron | 35.0% | |
| GAGATATCAAACCCATATTG+TGG | - | chr5.1:65706901-65706920 | None:intergenic | 35.0% | |
| GATGAATCAAATGGCAATGA+GGG | + | chr5.1:65709678-65709697 | MS.gene51087:intron | 35.0% | |
| GCATAACATGTTCAAACTGA+TGG | - | chr5.1:65709772-65709791 | None:intergenic | 35.0% | |
| GTTCAAGTGATTCATGTGTT+TGG | + | chr5.1:65705947-65705966 | MS.gene51087:intron | 35.0% | |
| GTTGCTTCATCCAGAATATT+TGG | + | chr5.1:65707977-65707996 | MS.gene51087:CDS | 35.0% | |
| TAAGGAGTTTATGGAGAAGA+AGG | + | chr5.1:65706610-65706629 | MS.gene51087:CDS | 35.0% | |
| TCAAAATCACTAAAGGCCAA+AGG | - | chr5.1:65709727-65709746 | None:intergenic | 35.0% | |
| TCAACTAGACGAAAGAGAAA+AGG | - | chr5.1:65707238-65707257 | None:intergenic | 35.0% | |
| TCATCAAATAGTGGTAGATC+TGG | + | chr5.1:65708909-65708928 | MS.gene51087:intron | 35.0% | |
| TGAGCTTGAAAGAATTGACA+AGG | + | chr5.1:65710055-65710074 | MS.gene51087:CDS | 35.0% | |
| TGATGAATCAAATGGCAATG+AGG | + | chr5.1:65709677-65709696 | MS.gene51087:intron | 35.0% | |
| TGTAAATGTGGAAACTTTGC+AGG | + | chr5.1:65710019-65710038 | MS.gene51087:intron | 35.0% | |
| TGTTGATATGTATGCTGAAG+GGG | - | chr5.1:65708197-65708216 | None:intergenic | 35.0% | |
| TTATCGTGGTTATGTGATTC+CGG | + | chr5.1:65705768-65705787 | MS.gene51087:CDS | 35.0% | |
| TTCAAATTGTGATGCTAGGT+TGG | + | chr5.1:65709849-65709868 | MS.gene51087:intron | 35.0% | |
| TTGAATAGAATGCGAGTTTG+GGG | + | chr5.1:65709393-65709412 | MS.gene51087:intron | 35.0% | |
| ! | AACTGATGGACAAAATCACA+AGG | - | chr5.1:65709758-65709777 | None:intergenic | 35.0% |
| ! | AATTGATTCTACTCGAAGCT+AGG | - | chr5.1:65706046-65706065 | None:intergenic | 35.0% |
| ! | AGCTAGCTTCTTTACATTCA+CGG | + | chr5.1:65707939-65707958 | MS.gene51087:CDS | 35.0% |
| ! | ATCCGATTCGATTCAGATTT+CGG | + | chr5.1:65705585-65705604 | MS.gene51087:CDS | 35.0% |
| ! | ATGTTTGGTTCCATTTCTAG+AGG | - | chr5.1:65706082-65706101 | None:intergenic | 35.0% |
| ! | CTACAAAGCCTGATCATTTT+AGG | - | chr5.1:65709469-65709488 | None:intergenic | 35.0% |
| ! | TAGAGAGTATGAACGAATCA+AGG | + | chr5.1:65708081-65708100 | MS.gene51087:CDS | 35.0% |
| ! | TGTTTGGTTCCATTTCTAGA+GGG | - | chr5.1:65706081-65706100 | None:intergenic | 35.0% |
| ! | TTCATTTTGTTGGGAGCTAT+GGG | - | chr5.1:65709575-65709594 | None:intergenic | 35.0% |
| !! | AAAAATCGGAGTTTGGTGTA+AGG | + | chr5.1:65705698-65705717 | MS.gene51087:CDS | 35.0% |
| !! | GAGAAGTATCTGAGGAAATT+AGG | + | chr5.1:65706308-65706327 | MS.gene51087:CDS | 35.0% |
| !! | GGATTTGCTTAGGATTTTCA+AGG | + | chr5.1:65706526-65706545 | MS.gene51087:CDS | 35.0% |
| !! | GGCATTGATACTTATCCATA+AGG | - | chr5.1:65708445-65708464 | None:intergenic | 35.0% |
| !! | GGTTGTTGATTTGAATGATG+TGG | + | chr5.1:65706481-65706500 | MS.gene51087:CDS | 35.0% |
| !!! | ATGCAGACGCAATTCTTTTT+TGG | - | chr5.1:65707075-65707094 | None:intergenic | 35.0% |
| !!! | CATTACCATTTTTTGTCACG+TGG | + | chr5.1:65707367-65707386 | MS.gene51087:intron | 35.0% |
| AAAGGCCAAAGGGTTAAATG+TGG | - | chr5.1:65709716-65709735 | None:intergenic | 40.0% | |
| AAGATTGCTTCAGCGTAAGA+AGG | - | chr5.1:65705490-65705509 | None:intergenic | 40.0% | |
| ACCATACATGAGATAGTGAG+TGG | + | chr5.1:65709186-65709205 | MS.gene51087:intron | 40.0% | |
| ACTAATCCAATCAGGGTTGA+TGG | + | chr5.1:65709034-65709053 | MS.gene51087:intron | 40.0% | |
| ACTGCAATGTGACCATACTT+GGG | + | chr5.1:65707117-65707136 | MS.gene51087:intron | 40.0% | |
| ACTTAGCAATGTTTCTCAGC+AGG | + | chr5.1:65706658-65706677 | MS.gene51087:CDS | 40.0% | |
| ACTTCCTAACATGCACTAAG+AGG | - | chr5.1:65706801-65706820 | None:intergenic | 40.0% | |
| ACTTTCAAAACATGCTGCGA+GGG | + | chr5.1:65710090-65710109 | MS.gene51087:CDS | 40.0% | |
| AGCACTCTCAGTTACTCTAA+CGG | - | chr5.1:65708047-65708066 | None:intergenic | 40.0% | |
| AGGACTGAAAAATCGGAGTT+TGG | + | chr5.1:65705691-65705710 | MS.gene51087:CDS | 40.0% | |
| ATACGTATCTGATTACCACG+AGG | + | chr5.1:65705671-65705690 | MS.gene51087:CDS | 40.0% | |
| ATCCACCACATTTAACCCTT+TGG | + | chr5.1:65709708-65709727 | MS.gene51087:intron | 40.0% | |
| ATCTGACCATCTCATATCCA+TGG | + | chr5.1:65709257-65709276 | MS.gene51087:intron | 40.0% | |
| ATGACTCCATTTCATCGTCT+TGG | - | chr5.1:65705363-65705382 | None:intergenic | 40.0% | |
| ATGGATATGAGATGGTCAGA+TGG | - | chr5.1:65709258-65709277 | None:intergenic | 40.0% | |
| ATTCTATCAGGTGATGCAGA+AGG | + | chr5.1:65706253-65706272 | MS.gene51087:intron | 40.0% | |
| ATTTCCAAACCCACACTAAG+AGG | - | chr5.1:65706992-65707011 | None:intergenic | 40.0% | |
| CAAAAAGGACTTCAGTGCAT+TGG | - | chr5.1:65709975-65709994 | None:intergenic | 40.0% | |
| CAAGACATGGGTGAAACAAT+GGG | + | chr5.1:65707507-65707526 | MS.gene51087:CDS | 40.0% | |
| CACCCTGGTATAAATTTGAC+TGG | + | chr5.1:65708505-65708524 | MS.gene51087:intron | 40.0% | |
| CAGTTCCACGTGACAAAAAA+TGG | - | chr5.1:65707375-65707394 | None:intergenic | 40.0% | |
| CATCCAGCTGATGAATCAAA+TGG | + | chr5.1:65709669-65709688 | MS.gene51087:intron | 40.0% | |
| CATTTGATTCATCAGCTGGA+TGG | - | chr5.1:65709671-65709690 | None:intergenic | 40.0% | |
| CTAGAAAACTCGAATCAAGC+CGG | + | chr5.1:65705544-65705563 | MS.gene51087:CDS | 40.0% | |
| CTAGACGAAAGAGAAAAGGT+TGG | - | chr5.1:65707234-65707253 | None:intergenic | 40.0% | |
| CTGTCAACAATGCACTTGAT+CGG | - | chr5.1:65707901-65707920 | None:intergenic | 40.0% | |
| CTTCAGGCTGTTATGTTACT+TGG | + | chr5.1:65710153-65710172 | MS.gene51087:intron | 40.0% | |
| CTTGTCTCCACCAAATATTC+TGG | - | chr5.1:65707990-65708009 | None:intergenic | 40.0% | |
| GATAAACTCCACGAATACCT+TGG | + | chr5.1:65707842-65707861 | MS.gene51087:CDS | 40.0% | |
| GCTTCATCCAGAATATTTGG+TGG | + | chr5.1:65707980-65707999 | MS.gene51087:CDS | 40.0% | |
| GGATCGAGGAATGAATTGAA+CGG | - | chr5.1:65705466-65705485 | None:intergenic | 40.0% | |
| GGGAATGTTTGATGCATCTA+TGG | - | chr5.1:65709501-65709520 | None:intergenic | 40.0% | |
| GTATGATAACTACTTCCACC+TGG | - | chr5.1:65705655-65705674 | None:intergenic | 40.0% | |
| GTCAAGTTTCAGCAAGACAT+GGG | + | chr5.1:65707495-65707514 | MS.gene51087:CDS | 40.0% | |
| GTCTTGCTGAAACTTGACAA+GGG | - | chr5.1:65707493-65707512 | None:intergenic | 40.0% | |
| GTGAAAAGTAGGACTCATTG+TGG | + | chr5.1:65706942-65706961 | MS.gene51087:intron | 40.0% | |
| TACCACGAGGACTGAAAAAT+CGG | + | chr5.1:65705684-65705703 | MS.gene51087:CDS | 40.0% | |
| TCAAGTCTATAGGAGTCTAC+TGG | - | chr5.1:65709377-65709396 | None:intergenic | 40.0% | |
| TCCACTCACTATCTCATGTA+TGG | - | chr5.1:65709190-65709209 | None:intergenic | 40.0% | |
| TCTGTTAGTAATGATTGGGG+AGG | + | chr5.1:65706560-65706579 | MS.gene51087:CDS | 40.0% | |
| TGACTCCATTTCATCGTCTT+GGG | - | chr5.1:65705362-65705381 | None:intergenic | 40.0% | |
| TGTCAAGTTTCAGCAAGACA+TGG | + | chr5.1:65707494-65707513 | MS.gene51087:CDS | 40.0% | |
| TGTCTTGCTGAAACTTGACA+AGG | - | chr5.1:65707494-65707513 | None:intergenic | 40.0% | |
| TGTTCCATTGAGAGCTTCAT+TGG | + | chr5.1:65708871-65708890 | MS.gene51087:intron | 40.0% | |
| TTCACTTCATTCGACACCAA+CGG | + | chr5.1:65705508-65705527 | MS.gene51087:CDS | 40.0% | |
| ! | AAAGTGGAAGGGATTTGCTT+AGG | + | chr5.1:65706516-65706535 | MS.gene51087:CDS | 40.0% |
| ! | AACGGTGATTTAGGACTTTG+CGG | - | chr5.1:65705448-65705467 | None:intergenic | 40.0% |
| ! | AAGGGGAAGCACAAATTTAC+AGG | - | chr5.1:65708180-65708199 | None:intergenic | 40.0% |
| ! | CATCTGCATTTACTTGTTGC+AGG | + | chr5.1:65707461-65707480 | MS.gene51087:intron | 40.0% |
| ! | CTCTACATCACGTGTTTTAC+AGG | + | chr5.1:65710208-65710227 | MS.gene51087:intron | 40.0% |
| ! | CTTCATTTTGTTGGGAGCTA+TGG | - | chr5.1:65709576-65709595 | None:intergenic | 40.0% |
| ! | GGAGAAGAAGGATAAGTTGA+TGG | + | chr5.1:65706622-65706641 | MS.gene51087:CDS | 40.0% |
| ! | GTTTGGTTCCATTTCTAGAG+GGG | - | chr5.1:65706080-65706099 | None:intergenic | 40.0% |
| ! | TATTTGGTGGAGACAAGTCT+AGG | + | chr5.1:65707993-65708012 | MS.gene51087:CDS | 40.0% |
| ! | TCGTTTGCTGCCTTTATAGA+TGG | - | chr5.1:65709532-65709551 | None:intergenic | 40.0% |
| ! | TTAGTGTCATTCAAACACCC+TGG | + | chr5.1:65708490-65708509 | MS.gene51087:intron | 40.0% |
| ! | TTGCCATTTGATTCATCAGC+TGG | - | chr5.1:65709675-65709694 | None:intergenic | 40.0% |
| !! | AAGGGTTAAATGTGGTGGAT+TGG | - | chr5.1:65709708-65709727 | None:intergenic | 40.0% |
| !! | AATTTTGGCCCCTCTAGAAA+TGG | + | chr5.1:65706069-65706088 | MS.gene51087:intron | 40.0% |
| !! | AGAGTGTTTTTGCAGGTTCA+AGG | + | chr5.1:65706365-65706384 | MS.gene51087:CDS | 40.0% |
| !! | AGGGTTAAATGTGGTGGATT+GGG | - | chr5.1:65709707-65709726 | None:intergenic | 40.0% |
| !! | GAGTGTTTTTGCAGGTTCAA+GGG | + | chr5.1:65706366-65706385 | MS.gene51087:CDS | 40.0% |
| !! | GGCTTGATTCGAGTTTTCTA+GGG | - | chr5.1:65705545-65705564 | None:intergenic | 40.0% |
| !! | GTCAGCAAAAGCATTGTTGA+TGG | - | chr5.1:65707879-65707898 | None:intergenic | 40.0% |
| !! | TGGATTAGTTGCAAGTTAGC+TGG | + | chr5.1:65706107-65706126 | MS.gene51087:intron | 40.0% |
| AAAGAGAACTACACCACCCT+AGG | - | chr5.1:65709875-65709894 | None:intergenic | 45.0% | |
| AAGCACGGAAGAGAGAAAAG+TGG | - | chr5.1:65706215-65706234 | None:intergenic | 45.0% | |
| ACATGCACTAAGAGGACACA+AGG | - | chr5.1:65706793-65706812 | None:intergenic | 45.0% | |
| ATAGAATGCGAGTTTGGGGA+CGG | + | chr5.1:65709397-65709416 | MS.gene51087:intron | 45.0% | |
| ATTGCTTCAGCGTAAGAAGG+AGG | - | chr5.1:65705487-65705506 | None:intergenic | 45.0% | |
| CATAACCATGGTTGCAAGTC+TGG | + | chr5.1:65709619-65709638 | MS.gene51087:intron | 45.0% | |
| CATCAGCTGGATGGTCTATT+GGG | - | chr5.1:65709662-65709681 | None:intergenic | 45.0% | |
| CATGCACTAAGAGGACACAA+GGG | - | chr5.1:65706792-65706811 | None:intergenic | 45.0% | |
| GAAAAGTTCGGTAGAGAGGA+AGG | + | chr5.1:65705801-65705820 | MS.gene51087:CDS | 45.0% | |
| GACTGCAATGTGACCATACT+TGG | + | chr5.1:65707116-65707135 | MS.gene51087:intron | 45.0% | |
| GACTTTCAAAACATGCTGCG+AGG | + | chr5.1:65710089-65710108 | MS.gene51087:CDS | 45.0% | |
| GCAAGACATGGGTGAAACAA+TGG | + | chr5.1:65707506-65707525 | MS.gene51087:CDS | 45.0% | |
| GGTAGAGAGGAAGGTAATGT+TGG | + | chr5.1:65705810-65705829 | MS.gene51087:intron | 45.0% | |
| GTGAAACAATGGGTGAGCTA+GGG | + | chr5.1:65707517-65707536 | MS.gene51087:CDS | 45.0% | |
| GTGTCCTCTTAGTGCATGTT+AGG | + | chr5.1:65706794-65706813 | MS.gene51087:intron | 45.0% | |
| TAGGGTTGCATCCTGTGATT+GGG | + | chr5.1:65706327-65706346 | MS.gene51087:CDS | 45.0% | |
| TCATCAGCTGGATGGTCTAT+TGG | - | chr5.1:65709663-65709682 | None:intergenic | 45.0% | |
| TCGAGTTAACTCAGAATCGC+AGG | + | chr5.1:65709290-65709309 | MS.gene51087:intron | 45.0% | |
| TCTTTCCAGACTTGCAACCA+TGG | - | chr5.1:65709627-65709646 | None:intergenic | 45.0% | |
| TTAGGGTTGCATCCTGTGAT+TGG | + | chr5.1:65706326-65706345 | MS.gene51087:CDS | 45.0% | |
| TTCGGTTTCTGATCCTCAAG+AGG | + | chr5.1:65705603-65705622 | MS.gene51087:CDS | 45.0% | |
| TTGCAGCCATGGATATGAGA+TGG | - | chr5.1:65709266-65709285 | None:intergenic | 45.0% | |
| TTGGTGTAAGGAGGAGGTTT+CGG | + | chr5.1:65705710-65705729 | MS.gene51087:CDS | 45.0% | |
| TTTGAATGATGTGGCTCAGC+CGG | + | chr5.1:65706490-65706509 | MS.gene51087:CDS | 45.0% | |
| ! | AACTCGAGATTTTGCAGCCA+TGG | - | chr5.1:65709277-65709296 | None:intergenic | 45.0% |
| ! | ACATCACGTGTTTTACAGGC+AGG | + | chr5.1:65710212-65710231 | MS.gene51087:intron | 45.0% |
| ! | CTCTCTACCGAACTTTTCTC+CGG | - | chr5.1:65705799-65705818 | None:intergenic | 45.0% |
| ! | GATAGTGAGTGGAGTATCCA+AGG | + | chr5.1:65709197-65709216 | MS.gene51087:intron | 45.0% |
| !! | AAATCCCTTCCACTTTTCGC+CGG | - | chr5.1:65706512-65706531 | None:intergenic | 45.0% |
| !! | AATCGGAGTTTGGTGTAAGG+AGG | + | chr5.1:65705701-65705720 | MS.gene51087:CDS | 45.0% |
| !! | CGGCTTGATTCGAGTTTTCT+AGG | - | chr5.1:65705546-65705565 | None:intergenic | 45.0% |
| !! | TAGCGTTGGAGAAGTATCTG+AGG | + | chr5.1:65706300-65706319 | MS.gene51087:CDS | 45.0% |
| !!! | GGAGTTGAGAGTGTTTTTGC+AGG | + | chr5.1:65706358-65706377 | MS.gene51087:CDS | 45.0% |
| AACAATGGGTGAGCTAGGGT+TGG | + | chr5.1:65707521-65707540 | MS.gene51087:CDS | 50.0% | |
| AACGTTGCCGGAGGAGTTAT+CGG | - | chr5.1:65705416-65705435 | None:intergenic | 50.0% | |
| AACTCGAATCAAGCCGGATC+CGG | + | chr5.1:65705550-65705569 | MS.gene51087:CDS | 50.0% | |
| AAGCGCGAAGAACGTGATCT+TGG | - | chr5.1:65705339-65705358 | None:intergenic | 50.0% | |
| AAGGGAAGTTGCCGTTGATG+AGG | + | chr5.1:65706384-65706403 | MS.gene51087:CDS | 50.0% | |
| ACATCCGTCGTCCTCATCAA+CGG | - | chr5.1:65706398-65706417 | None:intergenic | 50.0% | |
| ACCCACACTAAGAGGACACA+AGG | - | chr5.1:65706984-65707003 | None:intergenic | 50.0% | |
| AGAGAAGATGGCTGCTGTGT+GGG | + | chr5.1:65710241-65710260 | MS.gene51087:CDS | 50.0% | |
| CCCACACTAAGAGGACACAA+GGG | - | chr5.1:65706983-65707002 | None:intergenic | 50.0% | |
| CCCTTGTGTCCTCTTAGTGT+GGG | + | chr5.1:65706980-65706999 | MS.gene51087:intron | 50.0% | |
| CGCTTCCCAAGACGATGAAA+TGG | + | chr5.1:65705354-65705373 | MS.gene51087:CDS | 50.0% | |
| CGGAGAAAAGTTCGGTAGAG+AGG | + | chr5.1:65705797-65705816 | MS.gene51087:CDS | 50.0% | |
| CGGTTATCGGAGGTTTATCG+TGG | + | chr5.1:65705754-65705773 | MS.gene51087:CDS | 50.0% | |
| CTATCAGGTGATGCAGAAGG+AGG | + | chr5.1:65706256-65706275 | MS.gene51087:intron | 50.0% | |
| CTTGCACCATCAACCCTGAT+TGG | - | chr5.1:65709043-65709062 | None:intergenic | 50.0% | |
| GATGCAGAAGGAGGAGTTTG+TGG | + | chr5.1:65706265-65706284 | MS.gene51087:CDS | 50.0% | |
| GCGTCCAATGAAGCTCTCAA+TGG | - | chr5.1:65708878-65708897 | None:intergenic | 50.0% | |
| GGCCAAAGGGTTAAATGTGG+TGG | - | chr5.1:65709713-65709732 | None:intergenic | 50.0% | |
| GGTGAAACAATGGGTGAGCT+AGG | + | chr5.1:65707516-65707535 | MS.gene51087:CDS | 50.0% | |
| GTAACGAACTCGCTTGTTCC+AGG | + | chr5.1:65705634-65705653 | MS.gene51087:CDS | 50.0% | |
| GTACTCAAGTGACAGCAGCT+AGG | + | chr5.1:65710289-65710308 | MS.gene51087:CDS | 50.0% | |
| GTATGGTCACATTGCAGTCG+CGG | - | chr5.1:65707115-65707134 | None:intergenic | 50.0% | |
| GTGGTTATGTGATTCCGGTG+AGG | + | chr5.1:65705773-65705792 | MS.gene51087:CDS | 50.0% | |
| GTGTCCTCTTAGTGTGGGTT+TGG | + | chr5.1:65706985-65707004 | MS.gene51087:intron | 50.0% | |
| GTTACCTCTTGCTCCTCTTG+AGG | - | chr5.1:65705619-65705638 | None:intergenic | 50.0% | |
| TACGTTGTCGGAGCGGTTAT+CGG | + | chr5.1:65705741-65705760 | MS.gene51087:CDS | 50.0% | |
| TAGGGTTTGATCGTGACCGT+TGG | - | chr5.1:65705527-65705546 | None:intergenic | 50.0% | |
| TCCTCACTCTTCCCAATCAC+AGG | - | chr5.1:65706341-65706360 | None:intergenic | 50.0% | |
| TCCTGTGATTGGGAAGAGTG+AGG | + | chr5.1:65706337-65706356 | MS.gene51087:CDS | 50.0% | |
| TGATCCTCAAGAGGAGCAAG+AGG | + | chr5.1:65705612-65705631 | MS.gene51087:CDS | 50.0% | |
| TGATGGCTAGCATTGTCCCA+AGG | - | chr5.1:65707862-65707881 | None:intergenic | 50.0% | |
| TGCTGTGTGGGAAAAGCTTG+CGG | + | chr5.1:65710253-65710272 | MS.gene51087:CDS | 50.0% | |
| TGGCGTCAAGGATGCTTGAT+GGG | + | chr5.1:65706417-65706436 | MS.gene51087:CDS | 50.0% | |
| TGGTGTAAGGAGGAGGTTTC+GGG | + | chr5.1:65705711-65705730 | MS.gene51087:CDS | 50.0% | |
| TTATGTGATTCCGGTGAGGC+CGG | + | chr5.1:65705777-65705796 | MS.gene51087:CDS | 50.0% | |
| ! | GCATTGTCCCAAGGTATTCG+TGG | - | chr5.1:65707853-65707872 | None:intergenic | 50.0% |
| ! | GGTGATTTAGGACTTTGCGG+TGG | - | chr5.1:65705445-65705464 | None:intergenic | 50.0% |
| ! | GTGGAGACAAGTCTAGGATG+CGG | + | chr5.1:65707999-65708018 | MS.gene51087:CDS | 50.0% |
| !! | CTCCGATTTTTCAGTCCTCG+TGG | - | chr5.1:65705689-65705708 | None:intergenic | 50.0% |
| !! | GCGAGGGTTTGTTGTCAATC+AGG | + | chr5.1:65710106-65710125 | MS.gene51087:CDS | 50.0% |
| !! | TGTGATGCTAGGTTGGCCTA+GGG | + | chr5.1:65709856-65709875 | MS.gene51087:intron | 50.0% |
| !! | TTGTGATGCTAGGTTGGCCT+AGG | + | chr5.1:65709855-65709874 | MS.gene51087:intron | 50.0% |
| AATCAAGCCGGATCCGGATC+GGG | + | chr5.1:65705556-65705575 | MS.gene51087:CDS | 55.0% | |
| ACGAACTCGCTTGTTCCAGG+TGG | + | chr5.1:65705637-65705656 | MS.gene51087:CDS | 55.0% | |
| AGGAGGAGTTTGTGGAGCAG+AGG | + | chr5.1:65706273-65706292 | MS.gene51087:CDS | 55.0% | |
| AGGTGGTTACGTTGTCGGAG+CGG | + | chr5.1:65705734-65705753 | MS.gene51087:CDS | 55.0% | |
| CAGAGAAGATGGCTGCTGTG+TGG | + | chr5.1:65710240-65710259 | MS.gene51087:CDS | 55.0% | |
| CAGCGTAAGAAGGAGGATCG+AGG | - | chr5.1:65705480-65705499 | None:intergenic | 55.0% | |
| CGGTGGTTGTTGAACGTTGC+CGG | - | chr5.1:65705428-65705447 | None:intergenic | 55.0% | |
| CTGCAGCTGTCAAAGCAAGC+AGG | + | chr5.1:65707631-65707650 | MS.gene51087:CDS | 55.0% | |
| GAATCAAGCCGGATCCGGAT+CGG | + | chr5.1:65705555-65705574 | MS.gene51087:CDS | 55.0% | |
| GCCCTTGTGTCCTCTTAGTG+TGG | + | chr5.1:65706788-65706807 | MS.gene51087:intron | 55.0% | |
| GGAGCAGAGGAGATTAGCGT+TGG | + | chr5.1:65706286-65706305 | MS.gene51087:CDS | 55.0% | |
| GGCAGGCTATGCAGAGAAGA+TGG | + | chr5.1:65710229-65710248 | MS.gene51087:intron | 55.0% | |
| GGCGTCAAGGATGCTTGATG+GGG | + | chr5.1:65706418-65706437 | MS.gene51087:CDS | 55.0% | |
| GGTGAGGCCGGAGAAAAGTT+CGG | + | chr5.1:65705789-65705808 | MS.gene51087:CDS | 55.0% | |
| GTCAAGGATGCTTGATGGGG+CGG | + | chr5.1:65706421-65706440 | MS.gene51087:CDS | 55.0% | |
| GTGGCGTCAAGGATGCTTGA+TGG | + | chr5.1:65706416-65706435 | MS.gene51087:CDS | 55.0% | |
| TCAGCCGGCGAAAAGTGGAA+GGG | + | chr5.1:65706505-65706524 | MS.gene51087:CDS | 55.0% | |
| TCGGGAGGTGGTTACGTTGT+CGG | + | chr5.1:65705729-65705748 | MS.gene51087:CDS | 55.0% | |
| TGGTTGTTGAACGTTGCCGG+AGG | - | chr5.1:65705425-65705444 | None:intergenic | 55.0% | |
| TGTAAGGAGGAGGTTTCGGG+AGG | + | chr5.1:65705714-65705733 | MS.gene51087:CDS | 55.0% | |
| ! | ATCGGATTCGGTTCCCGATC+CGG | - | chr5.1:65705572-65705591 | None:intergenic | 55.0% |
| ! | GAACTTTTCTCCGGCCTCAC+CGG | - | chr5.1:65705790-65705809 | None:intergenic | 55.0% |
| ! | GTTGATGAGGACGACGGATG+TGG | + | chr5.1:65706397-65706416 | MS.gene51087:CDS | 55.0% |
| ! | GTTGCCGTTGATGAGGACGA+CGG | + | chr5.1:65706391-65706410 | MS.gene51087:CDS | 55.0% |
| !! | CGGAGTTTGGTGTAAGGAGG+AGG | + | chr5.1:65705704-65705723 | MS.gene51087:CDS | 55.0% |
| !! | TTGGGGAGGTGCTAAGCCAT+TGG | + | chr5.1:65706574-65706593 | MS.gene51087:CDS | 55.0% |
| AAGGAGGAGGTTTCGGGAGG+TGG | + | chr5.1:65705717-65705736 | MS.gene51087:CDS | 60.0% | |
| CTCAGCCGGCGAAAAGTGGA+AGG | + | chr5.1:65706504-65706523 | MS.gene51087:CDS | 60.0% | |
| CTCCACGACGACACCGACAA+CGG | + | chr5.1:65705388-65705407 | MS.gene51087:CDS | 60.0% | |
| GGAGTTATCGGCGCCGTTGT+CGG | - | chr5.1:65705404-65705423 | None:intergenic | 60.0% | |
| GTTGTCGGAGCGGTTATCGG+AGG | + | chr5.1:65705744-65705763 | MS.gene51087:CDS | 60.0% | |
| TTCGGTTCCCGATCCGGATC+CGG | - | chr5.1:65705566-65705585 | None:intergenic | 60.0% | |
| ! | AGCTGTTTGGGGCGGAGAGT+GGG | + | chr5.1:65706459-65706478 | MS.gene51087:CDS | 60.0% |
| !! | AACGGCGCCGATAACTCCTC+CGG | + | chr5.1:65705406-65705425 | MS.gene51087:CDS | 60.0% |
| !! | GATGCTAGGTTGGCCTAGGG+TGG | + | chr5.1:65709859-65709878 | MS.gene51087:intron | 60.0% |
| AGGCTGCCACGGCAGCTGTT+TGG | + | chr5.1:65706446-65706465 | MS.gene51087:CDS | 65.0% | |
| GCTGCCACGGCAGCTGTTTG+GGG | + | chr5.1:65706448-65706467 | MS.gene51087:CDS | 65.0% | |
| GGACGACGGATGTGGCGTCA+AGG | + | chr5.1:65706405-65706424 | MS.gene51087:CDS | 65.0% | |
| GGATGCTTGATGGGGCGGTG+AGG | + | chr5.1:65706426-65706445 | MS.gene51087:CDS | 65.0% | |
| GGCTGCCACGGCAGCTGTTT+GGG | + | chr5.1:65706447-65706466 | MS.gene51087:CDS | 65.0% | |
| GTGGCTCAGCCGGCGAAAAG+TGG | + | chr5.1:65706500-65706519 | MS.gene51087:CDS | 65.0% | |
| ! | CAGCTGTTTGGGGCGGAGAG+TGG | + | chr5.1:65706458-65706477 | MS.gene51087:CDS | 65.0% |
| ! | GCTGTTTGGGGCGGAGAGTG+GGG | + | chr5.1:65706460-65706479 | MS.gene51087:CDS | 65.0% |
| !! | CGTTGTCGGTGTCGTCGTGG+AGG | - | chr5.1:65705390-65705409 | None:intergenic | 65.0% |
| ATGGGGCGGTGAGGCTGCCA+CGG | + | chr5.1:65706435-65706454 | MS.gene51087:CDS | 70.0% | |
| GCCACGGCAGCTGTTTGGGG+CGG | + | chr5.1:65706451-65706470 | MS.gene51087:CDS | 70.0% | |
| TCCGCCCCAAACAGCTGCCG+TGG | - | chr5.1:65706455-65706474 | None:intergenic | 70.0% | |
| !! | CGCCGTTGTCGGTGTCGTCG+TGG | - | chr5.1:65705393-65705412 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 65705328 | 65710310 | 65705328 | ID=MS.gene51087 |
| chr5.1 | mRNA | 65705328 | 65710310 | 65705328 | ID=MS.gene51087.t1;Parent=MS.gene51087 |
| chr5.1 | exon | 65705328 | 65705822 | 65705328 | ID=MS.gene51087.t1.exon1;Parent=MS.gene51087.t1 |
| chr5.1 | CDS | 65705328 | 65705822 | 65705328 | ID=cds.MS.gene51087.t1;Parent=MS.gene51087.t1 |
| chr5.1 | exon | 65706263 | 65706679 | 65706263 | ID=MS.gene51087.t1.exon2;Parent=MS.gene51087.t1 |
| chr5.1 | CDS | 65706263 | 65706679 | 65706263 | ID=cds.MS.gene51087.t1;Parent=MS.gene51087.t1 |
| chr5.1 | exon | 65707483 | 65707692 | 65707483 | ID=MS.gene51087.t1.exon3;Parent=MS.gene51087.t1 |
| chr5.1 | CDS | 65707483 | 65707692 | 65707483 | ID=cds.MS.gene51087.t1;Parent=MS.gene51087.t1 |
| chr5.1 | exon | 65707842 | 65708102 | 65707842 | ID=MS.gene51087.t1.exon4;Parent=MS.gene51087.t1 |
| chr5.1 | CDS | 65707842 | 65708102 | 65707842 | ID=cds.MS.gene51087.t1;Parent=MS.gene51087.t1 |
| chr5.1 | exon | 65710041 | 65710127 | 65710041 | ID=MS.gene51087.t1.exon5;Parent=MS.gene51087.t1 |
| chr5.1 | CDS | 65710041 | 65710127 | 65710041 | ID=cds.MS.gene51087.t1;Parent=MS.gene51087.t1 |
| chr5.1 | exon | 65710230 | 65710310 | 65710230 | ID=MS.gene51087.t1.exon6;Parent=MS.gene51087.t1 |
| chr5.1 | CDS | 65710230 | 65710310 | 65710230 | ID=cds.MS.gene51087.t1;Parent=MS.gene51087.t1 |
| Gene Sequence |
| Protein sequence |
