Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053167.t1 | XP_013454565.1 | 97.6 | 409 | 9 | 1 | 1 | 408 | 1 | 409 | 8.70E-241 | 842.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053167.t1 | Q9LK31 | 63.5 | 400 | 131 | 3 | 20 | 405 | 27 | 425 | 7.4e-156 | 551.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053167.t1 | A0A072UGM8 | 97.6 | 409 | 9 | 1 | 1 | 408 | 1 | 409 | 6.3e-241 | 842.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene053167 | 0.814593 | 1.42E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene054558 | 0.840075 | 1.08E-57 | -1.69E-46 |
| MS.gene053167 | MS.gene056181 | 0.83431 | 3.23E-56 | -1.69E-46 |
| MS.gene053167 | MS.gene058054 | 0.81419 | 1.75E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene058638 | 0.844669 | 6.55E-59 | -1.69E-46 |
| MS.gene053167 | MS.gene058639 | 0.840291 | 9.50E-58 | -1.69E-46 |
| MS.gene053167 | MS.gene059171 | 0.811143 | 8.11E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene060296 | 0.803539 | 3.32E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene060400 | 0.800176 | 1.63E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene060563 | 0.812717 | 3.68E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene061878 | 0.810544 | 1.09E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene061958 | 0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene065593 | 0.814846 | 1.25E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene06837 | 0.802102 | 6.58E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene069225 | 0.857659 | 1.40E-62 | -1.69E-46 |
| MS.gene053167 | MS.gene069690 | 0.806933 | 6.47E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene072328 | 0.807069 | 6.05E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene072329 | 0.802928 | 4.45E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene072641 | 0.807197 | 5.68E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene072969 | 0.813424 | 2.58E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene07404 | 0.804104 | 2.54E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene08793 | 0.809353 | 1.97E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene08889 | 0.801846 | 7.42E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene09297 | 0.807308 | 5.39E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene21651 | 0.800827 | 1.20E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene21680 | 0.816316 | 5.89E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene23870 | 0.80027 | 1.56E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene23935 | 0.818116 | 2.32E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene24907 | 0.806398 | 8.39E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene26426 | 0.81972 | 1.00E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene26974 | 0.82048 | 6.71E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene27287 | 0.84703 | 1.50E-59 | -1.69E-46 |
| MS.gene053167 | MS.gene28632 | 0.809024 | 2.32E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene29047 | 0.839689 | 1.36E-57 | -1.69E-46 |
| MS.gene053167 | MS.gene29109 | 0.830468 | 2.89E-55 | -1.69E-46 |
| MS.gene053167 | MS.gene29209 | 0.820962 | 5.20E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene29229 | 0.82354 | 1.31E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene33183 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene36627 | 0.814114 | 1.82E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene37238 | 0.810336 | 1.21E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene37434 | -0.800678 | 1.29E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene37653 | 0.813175 | 2.92E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene38070 | 0.835889 | 1.29E-56 | -1.69E-46 |
| MS.gene053167 | MS.gene39222 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene40055 | 0.800303 | 1.54E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene40220 | 0.819599 | 1.07E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene41088 | 0.809012 | 2.33E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene41427 | 0.827022 | 1.97E-54 | -1.69E-46 |
| MS.gene053167 | MS.gene43152 | 0.800972 | 1.12E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene46447 | 0.804116 | 2.52E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene47554 | 0.818835 | 1.59E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene47985 | 0.832439 | 9.45E-56 | -1.69E-46 |
| MS.gene053167 | MS.gene48283 | 0.831929 | 1.26E-55 | -1.69E-46 |
| MS.gene053167 | MS.gene49777 | 0.820069 | 8.33E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene49816 | 0.800853 | 1.19E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene50005 | 0.813961 | 1.96E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene51028 | 0.829599 | 4.70E-55 | -1.69E-46 |
| MS.gene053167 | MS.gene51029 | 0.829308 | 5.53E-55 | -1.69E-46 |
| MS.gene053167 | MS.gene51087 | 0.804078 | 2.57E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene51445 | 0.803993 | 2.67E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene51641 | 0.811657 | 6.27E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene53552 | 0.806824 | 6.82E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene53600 | 0.813607 | 2.35E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene54547 | 0.819423 | 1.17E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene55282 | 0.820944 | 5.25E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene56163 | 0.808551 | 2.93E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene56476 | 0.80371 | 3.06E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene57217 | -0.825011 | 5.91E-54 | -1.69E-46 |
| MS.gene053167 | MS.gene57348 | 0.825302 | 5.05E-54 | -1.69E-46 |
| MS.gene053167 | MS.gene58098 | 0.809527 | 1.81E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene58438 | 0.807162 | 5.78E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene59366 | 0.815418 | 9.34E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene60144 | 0.820655 | 6.12E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene66119 | 0.818679 | 1.73E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene66858 | 0.812483 | 4.14E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene67107 | 0.811071 | 8.41E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene67412 | 0.811822 | 5.78E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene69097 | 0.841773 | 3.88E-58 | -1.69E-46 |
| MS.gene053167 | MS.gene70383 | 0.811186 | 7.94E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene71616 | 0.8042 | 2.42E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene74900 | 0.803633 | 3.18E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene76440 | 0.805821 | 1.11E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene76478 | 0.803959 | 2.72E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene76833 | 0.809584 | 1.76E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene77647 | 0.814643 | 1.39E-51 | -1.69E-46 |
| MS.gene053167 | MS.gene81208 | 0.809721 | 1.64E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene82624 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene82989 | 0.819542 | 1.10E-52 | -1.69E-46 |
| MS.gene053167 | MS.gene86919 | 0.80227 | 6.07E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene86937 | 0.802221 | 6.22E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene87622 | 0.821957 | 3.06E-53 | -1.69E-46 |
| MS.gene053167 | MS.gene87924 | 0.808061 | 3.73E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene87972 | 0.834268 | 3.31E-56 | -1.69E-46 |
| MS.gene053167 | MS.gene88231 | 0.806855 | 6.72E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene90712 | -0.80742 | 5.10E-50 | -1.69E-46 |
| MS.gene053167 | MS.gene91524 | 0.801736 | 7.82E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene92390 | 0.827237 | 1.75E-54 | -1.69E-46 |
| MS.gene053167 | MS.gene95049 | 0.801209 | 1.00E-48 | -1.69E-46 |
| MS.gene053167 | MS.gene96103 | 0.805128 | 1.55E-49 | -1.69E-46 |
| MS.gene053167 | MS.gene96690 | 0.826588 | 2.50E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053167.t1 | MTR_4g007970 | 97.555 | 409 | 9 | 1 | 1 | 408 | 1 | 409 | 0.0 | 824 |
| MS.gene053167.t1 | MTR_0018s0170 | 69.136 | 405 | 119 | 3 | 9 | 407 | 14 | 418 | 0.0 | 592 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053167.t1 | AT1G51540 | 74.693 | 407 | 88 | 4 | 13 | 407 | 11 | 414 | 0.0 | 637 |
| MS.gene053167.t1 | AT3G27220 | 62.745 | 408 | 137 | 3 | 13 | 406 | 20 | 426 | 0.0 | 543 |
Find 91 sgRNAs with CRISPR-Local
Find 319 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAACTCTAGTTGGATTT+TGG | 0.130657 | 4.2:-91981843 | MS.gene053167:CDS |
| GTGATCTGCGTCGGACTTCT+AGG | 0.209800 | 4.2:-91986587 | MS.gene053167:CDS |
| GATGATCGTCTTTATGTTCT+TGG | 0.214812 | 4.2:-91983360 | MS.gene053167:CDS |
| GAAATGGCACATTCACATTT+AGG | 0.243377 | 4.2:-91984808 | MS.gene053167:CDS |
| TCAATATGTGAGTTTGGTTT+TGG | 0.271476 | 4.2:+91983084 | None:intergenic |
| GAAATTGGAACGAGGGAAAT+AGG | 0.276239 | 4.2:+91986517 | None:intergenic |
| AACAATTCCATTGTTATTGC+TGG | 0.285172 | 4.2:-91983042 | MS.gene053167:CDS |
| ACCTGCTCCTCAACTTGTTT+GGG | 0.304175 | 4.2:-91986408 | MS.gene053167:CDS |
| GCAAATTCAATATGTGAGTT+TGG | 0.314174 | 4.2:+91983078 | None:intergenic |
| AAAACTCGGTTCCGCCAAAT+TGG | 0.314786 | 4.2:-91986612 | MS.gene053167:CDS |
| TACCTGCTCCTCAACTTGTT+TGG | 0.320322 | 4.2:-91986409 | MS.gene053167:CDS |
| CCAAAGTATTCAAGTTAAAC+TGG | 0.328184 | 4.2:+91982962 | None:intergenic |
| ACCGCTCCATTGCTTTGTTT+CGG | 0.343075 | 4.2:+91984693 | None:intergenic |
| TGTGAATGTGCCATTTCTTT+TGG | 0.343344 | 4.2:+91984814 | None:intergenic |
| GCACCCTGAAACCAAGAAAA+TGG | 0.346126 | 4.2:-91983004 | MS.gene053167:CDS |
| TCACCTGTTCCTAGACTTGA+TGG | 0.347002 | 4.2:-91986371 | MS.gene053167:CDS |
| GACGCAGATCACAACCAATT+TGG | 0.367182 | 4.2:+91986598 | None:intergenic |
| GGCTGGTTGTACTTCACTTC+AGG | 0.372763 | 4.2:-91981817 | MS.gene053167:CDS |
| CCTCTCCAAAGTTGAGTTGC+CGG | 0.377037 | 4.2:+91983773 | None:intergenic |
| TATATAGTCAATGGGCAGTA+TGG | 0.395192 | 4.2:-91984760 | MS.gene053167:CDS |
| TCCCAAACAAGTTGAGGAGC+AGG | 0.438279 | 4.2:+91986407 | None:intergenic |
| GTGAGGTCCTCCACGGGGAA+TGG | 0.439679 | 4.2:+91983634 | None:intergenic |
| CCAGTTTAACTTGAATACTT+TGG | 0.440901 | 4.2:-91982962 | MS.gene053167:intron |
| TGAGGTCCTCCACGGGGAAT+GGG | 0.456202 | 4.2:+91983635 | None:intergenic |
| AGATACATTTATATAGTCAA+TGG | 0.456594 | 4.2:-91984769 | MS.gene053167:CDS |
| TATGTTCTTGGTGGTCAAGA+AGG | 0.468117 | 4.2:-91983348 | MS.gene053167:CDS |
| TGGAGTCTTGCTGTCAAGAA+TGG | 0.473803 | 4.2:-91983692 | MS.gene053167:CDS |
| TGAAGAAGCCCATAGAAAAT+CGG | 0.474601 | 4.2:+91986550 | None:intergenic |
| CGGGTGAAAACAACTCTAGT+TGG | 0.475974 | 4.2:-91981850 | MS.gene053167:CDS |
| ATGCACCGGCAACTCAACTT+TGG | 0.480966 | 4.2:-91983778 | MS.gene053167:CDS |
| TCATCCAACATGTAAACATC+AGG | 0.495238 | 4.2:+91983138 | None:intergenic |
| TCCCTCCTTTGCCAGTCCCT+AGG | 0.504174 | 4.2:-91984669 | MS.gene053167:intron |
| GTTAGTTACATTATTAATGT+CGG | 0.505269 | 4.2:+91986301 | None:intergenic |
| GATCGTCTTTATGTTCTTGG+TGG | 0.510585 | 4.2:-91983357 | MS.gene053167:CDS |
| GATACATTTATATAGTCAAT+GGG | 0.516300 | 4.2:-91984768 | MS.gene053167:CDS |
| AGGTGGGACCTCTACATTGT+GGG | 0.517328 | 4.2:+91984737 | None:intergenic |
| GCACCATCAAGTCTAGGAAC+AGG | 0.519537 | 4.2:+91986368 | None:intergenic |
| GAGAGGTCGATTGCATGTAA+TGG | 0.523115 | 4.2:-91983756 | MS.gene053167:CDS |
| GAATGACATGGTTCGTCCGT+CGG | 0.523631 | 4.2:-91986636 | None:intergenic |
| AGAGGTCGATTGCATGTAAT+GGG | 0.523894 | 4.2:-91983755 | MS.gene053167:CDS |
| GAATGGAAAAGCATTAGAAA+AGG | 0.526434 | 4.2:-91983675 | MS.gene053167:CDS |
| ACTCACATATTGAATTTGCA+TGG | 0.528766 | 4.2:-91983074 | MS.gene053167:CDS |
| AAAAGGTAGTTGGAGATATG+TGG | 0.533601 | 4.2:-91981759 | MS.gene053167:CDS |
| AGACTCCAATGTTCTAATCC+AGG | 0.535412 | 4.2:+91983707 | None:intergenic |
| CATTTAGGAATGGCGACAGA+TGG | 0.535771 | 4.2:-91984793 | MS.gene053167:CDS |
| TTGCAGAAGTGGTCTGTGAT+CGG | 0.535945 | 4.2:-91981886 | MS.gene053167:intron |
| GAAAAGCATTAGAAAAGGAG+TGG | 0.542116 | 4.2:-91983670 | MS.gene053167:CDS |
| TTCTTTAGGAACAATGATTG+TGG | 0.544550 | 4.2:+91986487 | None:intergenic |
| GAACCTGTGAGGTCCTCCAC+GGG | 0.554212 | 4.2:+91983628 | None:intergenic |
| TTCCCCGTGGAGGACCTCAC+AGG | 0.556102 | 4.2:-91983631 | MS.gene053167:intron |
| ACTCAATTTCAGATATGCAC+CGG | 0.558589 | 4.2:-91983792 | MS.gene053167:intron |
| CTCACATATTGAATTTGCAT+GGG | 0.558890 | 4.2:-91983073 | MS.gene053167:CDS |
| TGATCGGAAAGTTACCATAC+CGG | 0.559582 | 4.2:-91981870 | MS.gene053167:CDS |
| GAACGAGGGAAATAGGAAGA+TGG | 0.564903 | 4.2:+91986524 | None:intergenic |
| GGCACATTCACATTTAGGAA+TGG | 0.569145 | 4.2:-91984803 | MS.gene053167:CDS |
| TTTGATGATGGAACTTGGGG+AGG | 0.574262 | 4.2:-91984850 | MS.gene053167:CDS |
| AATTCCATTGTTATTGCTGG+AGG | 0.576103 | 4.2:-91983039 | MS.gene053167:CDS |
| ATATATACATACCTAGGGAC+TGG | 0.577408 | 4.2:+91984658 | None:intergenic |
| CTATCCTGATGTTTACATGT+TGG | 0.581139 | 4.2:-91983142 | MS.gene053167:CDS |
| ATACACCTGGATTAGAACAT+TGG | 0.581948 | 4.2:-91983712 | MS.gene053167:CDS |
| TACCTAGGGACTGGCAAAGG+AGG | 0.586983 | 4.2:+91984667 | None:intergenic |
| GCAGATCACAACCAATTTGG+CGG | 0.587746 | 4.2:+91986601 | None:intergenic |
| TGTTTCGGTGTCAAGTACAA+AGG | 0.589819 | 4.2:+91984708 | None:intergenic |
| GTTCGTCCGTCGGTAAAACT+CGG | 0.592046 | 4.2:-91986626 | MS.gene053167:CDS |
| AAGAACATAAAGACGATCAT+CGG | 0.601248 | 4.2:+91983362 | None:intergenic |
| ATAGCAGCACCATCAAGTCT+AGG | 0.602814 | 4.2:+91986362 | None:intergenic |
| AAATTGGTTGTGATCTGCGT+CGG | 0.603223 | 4.2:-91986596 | MS.gene053167:CDS |
| CACTTCAGGACAGAGAGACA+AGG | 0.609550 | 4.2:-91981803 | MS.gene053167:CDS |
| AAGTACAAAGGTATCAGAGG+TGG | 0.611306 | 4.2:+91984720 | None:intergenic |
| ACCTAGGGACTGGCAAAGGA+GGG | 0.612823 | 4.2:+91984668 | None:intergenic |
| ACATACCTAGGGACTGGCAA+AGG | 0.618922 | 4.2:+91984664 | None:intergenic |
| ACGATCATCGGCCACAACAC+AGG | 0.620127 | 4.2:+91983374 | None:intergenic |
| TAAGTGCTCACGCAGGATGG+AGG | 0.622842 | 4.2:-91983292 | MS.gene053167:intron |
| CGAACCTGTGAGGTCCTCCA+CGG | 0.624364 | 4.2:+91983627 | None:intergenic |
| CAGTATGGCCCACAATGTAG+AGG | 0.627150 | 4.2:-91984745 | MS.gene053167:CDS |
| TGTTGGATGACGAGATGAAG+TGG | 0.632038 | 4.2:-91983125 | MS.gene053167:CDS |
| GTCAAGTACAAAGGTATCAG+AGG | 0.634465 | 4.2:+91984717 | None:intergenic |
| GATCGGAAAGTTACCATACC+GGG | 0.637162 | 4.2:-91981869 | MS.gene053167:CDS |
| AAAGAGAATCGACATACACC+TGG | 0.643815 | 4.2:-91983725 | MS.gene053167:CDS |
| TTGACACCGAAACAAAGCAA+TGG | 0.649372 | 4.2:-91984699 | MS.gene053167:CDS |
| AGTACAAAGGTATCAGAGGT+GGG | 0.650373 | 4.2:+91984721 | None:intergenic |
| GAGGTGGGACCTCTACATTG+TGG | 0.657473 | 4.2:+91984736 | None:intergenic |
| ACCGAAACAAAGCAATGGAG+CGG | 0.665583 | 4.2:-91984694 | MS.gene053167:CDS |
| ACTTCAGGACAGAGAGACAA+GGG | 0.669595 | 4.2:-91981802 | MS.gene053167:CDS |
| TGTGCCTCCAGCAATAACAA+TGG | 0.669691 | 4.2:+91983035 | None:intergenic |
| GGTCGATTGCATGTAATGGG+TGG | 0.672590 | 4.2:-91983752 | MS.gene053167:CDS |
| CCGGCAACTCAACTTTGGAG+AGG | 0.698757 | 4.2:-91983773 | MS.gene053167:CDS |
| GAGATACCCATTCCCCGTGG+AGG | 0.712935 | 4.2:-91983641 | MS.gene053167:CDS |
| TATTAAGCAACGAACCTGTG+AGG | 0.715011 | 4.2:+91983617 | None:intergenic |
| AGTGAGATACCCATTCCCCG+TGG | 0.747527 | 4.2:-91983644 | MS.gene053167:CDS |
| AACCTGTGAGGTCCTCCACG+GGG | 0.758262 | 4.2:+91983629 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATAAATAAAGATTAAAA+TGG | + | chr4.2:91984888-91984907 | None:intergenic | 10.0% |
| !!! | ATAGAAATATTAAATTTTGA+AGG | + | chr4.2:91986216-91986235 | None:intergenic | 10.0% |
| !! | AATTAAAAATTGTAAAACCT+GGG | + | chr4.2:91985915-91985934 | None:intergenic | 15.0% |
| !! | ATAAATATAGTAAGATGATT+AGG | - | chr4.2:91985950-91985969 | MS.gene053167:intron | 15.0% |
| !!! | GATATATATAATTTTGATGA+TGG | - | chr4.2:91983499-91983518 | MS.gene053167:intron | 15.0% |
| !!! | TAGTTCTAATCAATATTTTA+TGG | + | chr4.2:91984861-91984880 | None:intergenic | 15.0% |
| !! | AGATACATTTATATAGTCAA+TGG | - | chr4.2:91983592-91983611 | MS.gene053167:intron | 20.0% |
| !! | ATAGTTAATTACAATTAGTG+TGG | - | chr4.2:91982254-91982273 | MS.gene053167:intron | 20.0% |
| !! | CAATTAAAAATTGTAAAACC+TGG | + | chr4.2:91985916-91985935 | None:intergenic | 20.0% |
| !! | CTATAGTTAATGAGAAAATA+TGG | - | chr4.2:91982688-91982707 | MS.gene053167:intron | 20.0% |
| !! | GATACATTTATATAGTCAAT+GGG | - | chr4.2:91983593-91983612 | MS.gene053167:intron | 20.0% |
| !! | GTGTTTAAAAGAACTTATAT+GGG | + | chr4.2:91983427-91983446 | None:intergenic | 20.0% |
| !! | GTTAGTTACATTATTAATGT+CGG | + | chr4.2:91982063-91982082 | None:intergenic | 20.0% |
| !! | TAGTTAATTACAATTAGTGT+GGG | - | chr4.2:91982255-91982274 | MS.gene053167:intron | 20.0% |
| !! | TTATATACAACAAACACTTA+AGG | + | chr4.2:91982901-91982920 | None:intergenic | 20.0% |
| !! | TTTCTGATATTTCTTTGTAA+TGG | - | chr4.2:91983783-91983802 | MS.gene053167:CDS | 20.0% |
| !!! | AATGTAATTTTTCTTGTATC+TGG | - | chr4.2:91984515-91984534 | MS.gene053167:intron | 20.0% |
| !!! | ACTGATAAACATCATATTTT+AGG | - | chr4.2:91984963-91984982 | MS.gene053167:intron | 20.0% |
| !!! | ATTTTGATAAATAGCTTAGT+TGG | - | chr4.2:91982629-91982648 | MS.gene053167:intron | 20.0% |
| !!! | CTGATAAACATCATATTTTA+GGG | - | chr4.2:91984964-91984983 | MS.gene053167:intron | 20.0% |
| !!! | GTTATATTATTGTGTTTTTC+AGG | - | chr4.2:91983462-91983481 | MS.gene053167:intron | 20.0% |
| !!! | GTTTTACAATTTTTAATTGC+TGG | - | chr4.2:91985917-91985936 | MS.gene053167:intron | 20.0% |
| !!! | TAAGTGTTTGTTGTATATAA+GGG | - | chr4.2:91982901-91982920 | MS.gene053167:intron | 20.0% |
| !!! | TTAAGTGTTTGTTGTATATA+AGG | - | chr4.2:91982900-91982919 | MS.gene053167:intron | 20.0% |
| !!! | TTCTTTTGTTCTTTTTCTTT+AGG | + | chr4.2:91981891-91981910 | None:intergenic | 20.0% |
| !!! | TTGTTTTCATTTAAGCTATA+AGG | - | chr4.2:91982716-91982735 | MS.gene053167:intron | 20.0% |
| !!! | TTTTGATAAATAGCTTAGTT+GGG | - | chr4.2:91982630-91982649 | MS.gene053167:intron | 20.0% |
| !!! | TTTTTTCTTCGAATTATTAC+CGG | - | chr4.2:91985820-91985839 | MS.gene053167:intron | 20.0% |
| ! | AAAACAATACTTCAAAACGT+TGG | + | chr4.2:91982570-91982589 | None:intergenic | 25.0% |
| ! | AATTAGCTGGAAACAATTTA+TGG | - | chr4.2:91982772-91982791 | MS.gene053167:intron | 25.0% |
| ! | AATTATAAAAGCTCCATAAG+TGG | + | chr4.2:91985641-91985660 | None:intergenic | 25.0% |
| ! | ACATTCATATATACATACCT+AGG | + | chr4.2:91983712-91983731 | None:intergenic | 25.0% |
| ! | AGCTATGACATTTCATTAAA+TGG | + | chr4.2:91986111-91986130 | None:intergenic | 25.0% |
| ! | AGTTAAGGACTTATTGAATA+AGG | - | chr4.2:91982602-91982621 | MS.gene053167:intron | 25.0% |
| ! | ATAACATGTATTAGAAATCG+TGG | - | chr4.2:91982933-91982952 | MS.gene053167:intron | 25.0% |
| ! | ATTATAAAAGCTCCATAAGT+GGG | + | chr4.2:91985640-91985659 | None:intergenic | 25.0% |
| ! | CAACATAAAGAGCTATAAAA+TGG | + | chr4.2:91983868-91983887 | None:intergenic | 25.0% |
| ! | CATTCATATATACATACCTA+GGG | + | chr4.2:91983711-91983730 | None:intergenic | 25.0% |
| ! | CGTGTTTAAAAGAACTTATA+TGG | + | chr4.2:91983428-91983447 | None:intergenic | 25.0% |
| ! | GTTAAGGACTTATTGAATAA+GGG | - | chr4.2:91982603-91982622 | MS.gene053167:intron | 25.0% |
| ! | TATCAACTGAGTTGTATTTA+CGG | - | chr4.2:91982514-91982533 | MS.gene053167:intron | 25.0% |
| ! | TGAAGTTTCAAAGAAGTTAT+GGG | - | chr4.2:91984078-91984097 | MS.gene053167:intron | 25.0% |
| ! | TTGAAGTTTCAAAGAAGTTA+TGG | - | chr4.2:91984077-91984096 | MS.gene053167:intron | 25.0% |
| ! | TTGGGTGTTTATTATATAAG+TGG | - | chr4.2:91982648-91982667 | MS.gene053167:intron | 25.0% |
| ! | TTTGATGTATAGCTTAGTTA+AGG | - | chr4.2:91982587-91982606 | MS.gene053167:intron | 25.0% |
| !! | AAATAAAAGCTTGTTCGAAA+CGG | + | chr4.2:91983126-91983145 | None:intergenic | 25.0% |
| !! | ACATTTTAAATGTGGAAAAG+TGG | + | chr4.2:91982418-91982437 | None:intergenic | 25.0% |
| !! | AGTTTTTATGTTAAGGTTCT+TGG | - | chr4.2:91986058-91986077 | MS.gene053167:intron | 25.0% |
| !! | ATTTTAAATGTGGAAAAGTG+GGG | + | chr4.2:91982416-91982435 | None:intergenic | 25.0% |
| !! | CAGTTAAAATAGTTTCAAGT+TGG | + | chr4.2:91982319-91982338 | None:intergenic | 25.0% |
| !! | CATTTTAAATGTGGAAAAGT+GGG | + | chr4.2:91982417-91982436 | None:intergenic | 25.0% |
| !! | CTTATGGAGCTTTTATAATT+TGG | - | chr4.2:91985641-91985660 | MS.gene053167:intron | 25.0% |
| !! | GAATGCAAGTTTTTATGTTA+AGG | - | chr4.2:91986051-91986070 | MS.gene053167:intron | 25.0% |
| !! | GACATATACATCATACATTT+TGG | + | chr4.2:91984929-91984948 | None:intergenic | 25.0% |
| !! | GTTTTTATGTTAAGGTTCTT+GGG | - | chr4.2:91986059-91986078 | MS.gene053167:intron | 25.0% |
| !! | TCTAAGACATTTGATATGTT+GGG | + | chr4.2:91982192-91982211 | None:intergenic | 25.0% |
| !! | TGTTATTAATTTTGCAGAAG+TGG | - | chr4.2:91986464-91986483 | MS.gene053167:CDS | 25.0% |
| !!! | AAATTTTGAAATTGGAACGA+GGG | + | chr4.2:91981854-91981873 | None:intergenic | 25.0% |
| !!! | ACCAAGAAAATGGTTTTAAA+CGG | - | chr4.2:91985367-91985386 | MS.gene053167:intron | 25.0% |
| !!! | ACTAGCATATTTTAGTCATT+AGG | - | chr4.2:91983922-91983941 | MS.gene053167:intron | 25.0% |
| !!! | ACTTTTCCACATTTAAAATG+TGG | - | chr4.2:91982417-91982436 | MS.gene053167:intron | 25.0% |
| !!! | ATAATTTTGATGATGGAACT+TGG | - | chr4.2:91983506-91983525 | MS.gene053167:intron | 25.0% |
| !!! | ATTTTTCTTGTATCTGGTTT+TGG | - | chr4.2:91984521-91984540 | MS.gene053167:intron | 25.0% |
| !!! | CTTTTCCACATTTAAAATGT+GGG | - | chr4.2:91982418-91982437 | MS.gene053167:intron | 25.0% |
| !!! | GATTGTGGAAATTTTGAAAT+TGG | + | chr4.2:91981862-91981881 | None:intergenic | 25.0% |
| !!! | TAATTTTGATGATGGAACTT+GGG | - | chr4.2:91983507-91983526 | MS.gene053167:intron | 25.0% |
| !!! | TTCTAAGACATTTGATATGT+TGG | + | chr4.2:91982193-91982212 | None:intergenic | 25.0% |
| !!! | TTGGATATTCTAGTTACTTT+TGG | + | chr4.2:91982300-91982319 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTCAAGAGTTTAG+CGG | - | chr4.2:91982109-91982128 | MS.gene053167:intron | 25.0% |
| !!! | TTTTTCTTGTATCTGGTTTT+GGG | - | chr4.2:91984522-91984541 | MS.gene053167:intron | 25.0% |
| AACTTGCAACTAATCTAACT+AGG | - | chr4.2:91982486-91982505 | MS.gene053167:intron | 30.0% | |
| AAGAACATAAAGACGATCAT+CGG | + | chr4.2:91985002-91985021 | None:intergenic | 30.0% | |
| AAGTGAACGATAAACAACAA+AGG | + | chr4.2:91984339-91984358 | None:intergenic | 30.0% | |
| AATACAATCCAATTGCAAGT+AGG | - | chr4.2:91986397-91986416 | MS.gene053167:CDS | 30.0% | |
| ACATAAAAACTTGCATTCAG+TGG | + | chr4.2:91986049-91986068 | None:intergenic | 30.0% | |
| ACATACTAATTGATCAGAAG+TGG | - | chr4.2:91982142-91982161 | MS.gene053167:intron | 30.0% | |
| ACATGCTGAAATAACTGAAA+TGG | + | chr4.2:91985563-91985582 | None:intergenic | 30.0% | |
| ACATTGCATAATATATGCAG+GGG | - | chr4.2:91982368-91982387 | MS.gene053167:intron | 30.0% | |
| ACTCACATATTGAATTTGCA+TGG | - | chr4.2:91985287-91985306 | MS.gene053167:intron | 30.0% | |
| ACTTCTCTTATAAAGCTCTT+AGG | - | chr4.2:91985427-91985446 | MS.gene053167:intron | 30.0% | |
| AGACATTGCATAATATATGC+AGG | - | chr4.2:91982366-91982385 | MS.gene053167:intron | 30.0% | |
| ATACTAATTGATCAGAAGTG+GGG | - | chr4.2:91982144-91982163 | MS.gene053167:intron | 30.0% | |
| ATCAACTGAGTTGTATTTAC+GGG | - | chr4.2:91982515-91982534 | MS.gene053167:intron | 30.0% | |
| ATGTATTAGAAATCGTGGTT+GGG | - | chr4.2:91982938-91982957 | MS.gene053167:intron | 30.0% | |
| CATACTAATTGATCAGAAGT+GGG | - | chr4.2:91982143-91982162 | MS.gene053167:intron | 30.0% | |
| CATGCTGAAATAACTGAAAT+GGG | + | chr4.2:91985562-91985581 | None:intergenic | 30.0% | |
| CTCACATATTGAATTTGCAT+GGG | - | chr4.2:91985288-91985307 | MS.gene053167:intron | 30.0% | |
| GAAACCTAACTGAAACTAAA+TGG | + | chr4.2:91984227-91984246 | None:intergenic | 30.0% | |
| GACATTGCATAATATATGCA+GGG | - | chr4.2:91982367-91982386 | MS.gene053167:intron | 30.0% | |
| GAGACATGGAATAACATTTA+AGG | - | chr4.2:91984270-91984289 | MS.gene053167:intron | 30.0% | |
| GATTTCAGAACATAGAGAAA+GGG | + | chr4.2:91985685-91985704 | None:intergenic | 30.0% | |
| GCAAATTCAATATGTGAGTT+TGG | + | chr4.2:91985286-91985305 | None:intergenic | 30.0% | |
| GTTTATCAGTAACAAATAGC+AGG | + | chr4.2:91984953-91984972 | None:intergenic | 30.0% | |
| TAACAGAAGCTATTGTTGTA+TGG | - | chr4.2:91982798-91982817 | MS.gene053167:intron | 30.0% | |
| TCACAATTTACACTGTGAAA+AGG | + | chr4.2:91986143-91986162 | None:intergenic | 30.0% | |
| TCATTGTTTATTGTCATGTC+AGG | - | chr4.2:91985192-91985211 | MS.gene053167:intron | 30.0% | |
| TGAAGAACTAGACACTAAAA+AGG | + | chr4.2:91986188-91986207 | None:intergenic | 30.0% | |
| TGATTTCAGAACATAGAGAA+AGG | + | chr4.2:91985686-91985705 | None:intergenic | 30.0% | |
| TGCTCTATCATGATATTCAA+GGG | + | chr4.2:91983978-91983997 | None:intergenic | 30.0% | |
| TGCTTATGAACAACTTATCT+AGG | + | chr4.2:91982865-91982884 | None:intergenic | 30.0% | |
| TTGCATATTGACAGCAAATA+AGG | + | chr4.2:91986286-91986305 | None:intergenic | 30.0% | |
| ! | AAAACCATTTTCTTGGTTTC+AGG | + | chr4.2:91985364-91985383 | None:intergenic | 30.0% |
| ! | AAACAACTCTAGTTGGATTT+TGG | - | chr4.2:91986518-91986537 | MS.gene053167:CDS | 30.0% |
| ! | AAACCATTTTCTTGGTTTCA+GGG | + | chr4.2:91985363-91985382 | None:intergenic | 30.0% |
| ! | AACAATTCCATTGTTATTGC+TGG | - | chr4.2:91985319-91985338 | MS.gene053167:intron | 30.0% |
| ! | CCAAAGTATTCAAGTTAAAC+TGG | + | chr4.2:91985402-91985421 | None:intergenic | 30.0% |
| ! | CTATCAGAAAATTGTGGTTT+TGG | - | chr4.2:91984377-91984396 | MS.gene053167:intron | 30.0% |
| ! | GTAACTTGTGTCATAACTTA+TGG | - | chr4.2:91986239-91986258 | MS.gene053167:intron | 30.0% |
| ! | TGATCCATTTAGTTTCAGTT+AGG | - | chr4.2:91984220-91984239 | MS.gene053167:intron | 30.0% |
| ! | TTCTTTAGGAACAATGATTG+TGG | + | chr4.2:91981877-91981896 | None:intergenic | 30.0% |
| ! | TTCTTTTAAACACGTCTTAG+TGG | - | chr4.2:91983434-91983453 | MS.gene053167:intron | 30.0% |
| ! | TTTTGACATGCCAAAAGAAA+TGG | - | chr4.2:91983537-91983556 | MS.gene053167:intron | 30.0% |
| !! | AATCTTTTCTTCGTTTTTGC+TGG | - | chr4.2:91982032-91982051 | MS.gene053167:intron | 30.0% |
| !! | ACTCACTTGAACTTTGAAAT+TGG | - | chr4.2:91985584-91985603 | MS.gene053167:intron | 30.0% |
| !! | ATAGCTCTTTATGTTGCTTT+AGG | - | chr4.2:91983872-91983891 | MS.gene053167:intron | 30.0% |
| !! | CCAGTTTAACTTGAATACTT+TGG | - | chr4.2:91985399-91985418 | MS.gene053167:intron | 30.0% |
| !! | CTCACTTGAACTTTGAAATT+GGG | - | chr4.2:91985585-91985604 | MS.gene053167:intron | 30.0% |
| !! | GAATGGAAAAGCATTAGAAA+AGG | - | chr4.2:91984686-91984705 | MS.gene053167:CDS | 30.0% |
| !! | TCAATATGTGAGTTTGGTTT+TGG | + | chr4.2:91985280-91985299 | None:intergenic | 30.0% |
| !! | TCCGTTTAAAACCATTTTCT+TGG | + | chr4.2:91985371-91985390 | None:intergenic | 30.0% |
| !! | TTCACTAGTTTGACTTTTAG+TGG | - | chr4.2:91984244-91984263 | MS.gene053167:intron | 30.0% |
| !! | TTTTGGCTATCAGAAAATTG+TGG | - | chr4.2:91984371-91984390 | MS.gene053167:intron | 30.0% |
| !!! | AATTTTGATGATGGAACTTG+GGG | - | chr4.2:91983508-91983527 | MS.gene053167:intron | 30.0% |
| !!! | ATATCTCCAACTACCTTTTT+TGG | + | chr4.2:91986601-91986620 | None:intergenic | 30.0% |
| !!! | CACTTGTCTGACTTATTTTT+TGG | - | chr4.2:91984354-91984373 | MS.gene053167:intron | 30.0% |
| !!! | GAAATTTTGAAATTGGAACG+AGG | + | chr4.2:91981855-91981874 | None:intergenic | 30.0% |
| AAAAGGTAGTTGGAGATATG+TGG | - | chr4.2:91986602-91986621 | MS.gene053167:CDS | 35.0% | |
| AAAGTTAGGCTAATCACAGA+AGG | + | chr4.2:91985137-91985156 | None:intergenic | 35.0% | |
| AATAACAAACAAATGCCGTG+TGG | + | chr4.2:91983757-91983776 | None:intergenic | 35.0% | |
| ACAGCAAAAGATAGAGAAGT+GGG | - | chr4.2:91984116-91984135 | MS.gene053167:intron | 35.0% | |
| ACTCAATTTCAGATATGCAC+CGG | - | chr4.2:91984569-91984588 | MS.gene053167:intron | 35.0% | |
| AGACACTAAAAAGGACTCAA+GGG | + | chr4.2:91986179-91986198 | None:intergenic | 35.0% | |
| AGTTGCTTCTAACATTGAAG+AGG | - | chr4.2:91983270-91983289 | MS.gene053167:intron | 35.0% | |
| ATATATACATACCTAGGGAC+TGG | + | chr4.2:91983706-91983725 | None:intergenic | 35.0% | |
| ATTGACACAGACACAAACAT+CGG | + | chr4.2:91985857-91985876 | None:intergenic | 35.0% | |
| CAAACACTTAAGGCTACATT+TGG | + | chr4.2:91982891-91982910 | None:intergenic | 35.0% | |
| CATGTATTAGAAATCGTGGT+TGG | - | chr4.2:91982937-91982956 | MS.gene053167:intron | 35.0% | |
| CTACACTTGAATGACAGTAT+GGG | - | chr4.2:91986006-91986025 | MS.gene053167:intron | 35.0% | |
| CTATCCTGATGTTTACATGT+TGG | - | chr4.2:91985219-91985238 | MS.gene053167:intron | 35.0% | |
| CTGAACAAGTGTTTGTAAGT+GGG | + | chr4.2:91983008-91983027 | None:intergenic | 35.0% | |
| CTGCTCTATCATGATATTCA+AGG | + | chr4.2:91983979-91983998 | None:intergenic | 35.0% | |
| GAAATGGCACATTCACATTT+AGG | - | chr4.2:91983553-91983572 | MS.gene053167:intron | 35.0% | |
| GAATATCATGATAGAGCAGT+TGG | - | chr4.2:91983980-91983999 | MS.gene053167:intron | 35.0% | |
| GAGAGGATATTGAAATTAGC+TGG | - | chr4.2:91982759-91982778 | MS.gene053167:intron | 35.0% | |
| GATGATCGTCTTTATGTTCT+TGG | - | chr4.2:91985001-91985020 | MS.gene053167:intron | 35.0% | |
| TACTAATTGATCAGAAGTGG+GGG | - | chr4.2:91982145-91982164 | MS.gene053167:intron | 35.0% | |
| TACTCTCTCAAATTACCACA+CGG | - | chr4.2:91983739-91983758 | MS.gene053167:CDS | 35.0% | |
| TAGACACTAAAAAGGACTCA+AGG | + | chr4.2:91986180-91986199 | None:intergenic | 35.0% | |
| TATATAGTCAATGGGCAGTA+TGG | - | chr4.2:91983601-91983620 | MS.gene053167:intron | 35.0% | |
| TCATCCAACATGTAAACATC+AGG | + | chr4.2:91985226-91985245 | None:intergenic | 35.0% | |
| TGAACAAGTGTTTGTAAGTG+GGG | + | chr4.2:91983007-91983026 | None:intergenic | 35.0% | |
| TGAAGAAGCCCATAGAAAAT+CGG | + | chr4.2:91981814-91981833 | None:intergenic | 35.0% | |
| TGACTCTTCACTGTTGAAAA+AGG | - | chr4.2:91984459-91984478 | MS.gene053167:intron | 35.0% | |
| TGATGATCCATCACCAAAAA+AGG | - | chr4.2:91986585-91986604 | MS.gene053167:CDS | 35.0% | |
| TGTTTCTTACAAGCGTAGTT+AGG | - | chr4.2:91983054-91983073 | MS.gene053167:CDS | 35.0% | |
| TTCAAATTGTCGCATGATGT+AGG | - | chr4.2:91983814-91983833 | MS.gene053167:intron | 35.0% | |
| TTGAATGCAATCACATGCAT+TGG | + | chr4.2:91985790-91985809 | None:intergenic | 35.0% | |
| TTGATGAACAGAGATGAGAT+AGG | + | chr4.2:91984028-91984047 | None:intergenic | 35.0% | |
| TTGTTTATTGTCATGTCAGG+TGG | - | chr4.2:91985195-91985214 | MS.gene053167:intron | 35.0% | |
| ! | AATTCCATTGTTATTGCTGG+AGG | - | chr4.2:91985322-91985341 | MS.gene053167:intron | 35.0% |
| ! | ATACACCTGGATTAGAACAT+TGG | - | chr4.2:91984649-91984668 | MS.gene053167:intron | 35.0% |
| ! | ATCTTTTCCCAAACAAGTTG+AGG | + | chr4.2:91981963-91981982 | None:intergenic | 35.0% |
| ! | GGAGCATCATACTTTGTTAT+TGG | - | chr4.2:91986418-91986437 | MS.gene053167:CDS | 35.0% |
| ! | GTGTTTAGATGTCATTTGCT+GGG | - | chr4.2:91984407-91984426 | MS.gene053167:intron | 35.0% |
| ! | TGGTCAAGAAGGTGATTTTA+TGG | - | chr4.2:91985024-91985043 | MS.gene053167:intron | 35.0% |
| ! | TGTGTTTAGATGTCATTTGC+TGG | - | chr4.2:91984406-91984425 | MS.gene053167:intron | 35.0% |
| !! | AAGGCATTTTCCTACTAAGA+GGG | + | chr4.2:91984320-91984339 | None:intergenic | 35.0% |
| !! | ACTCTAGTTGGATTTTGGAA+TGG | - | chr4.2:91986523-91986542 | MS.gene053167:CDS | 35.0% |
| !! | CTAGTTTGACTTTTAGTGGA+CGG | - | chr4.2:91984248-91984267 | MS.gene053167:intron | 35.0% |
| !! | CTATCTTTTGCTGTGCTATA+GGG | + | chr4.2:91984110-91984129 | None:intergenic | 35.0% |
| !! | CTTTATGTTGCTTTAGGAAG+TGG | - | chr4.2:91983878-91983897 | MS.gene053167:intron | 35.0% |
| !! | GAAAAGCATTAGAAAAGGAG+TGG | - | chr4.2:91984691-91984710 | MS.gene053167:CDS | 35.0% |
| !! | TCTATCTTTTGCTGTGCTAT+AGG | + | chr4.2:91984111-91984130 | None:intergenic | 35.0% |
| !!! | AAAGGCATTTTCCTACTAAG+AGG | + | chr4.2:91984321-91984340 | None:intergenic | 35.0% |
| !!! | ACTCATTGCCGATTTTCTAT+GGG | - | chr4.2:91981803-91981822 | MS.gene053167:CDS | 35.0% |
| !!! | TGTGAATGTGCCATTTCTTT+TGG | + | chr4.2:91983550-91983569 | None:intergenic | 35.0% |
| !!! | TTTTTGAAGCTATTGTCGAG+AGG | - | chr4.2:91982742-91982761 | MS.gene053167:intron | 35.0% |
| !!! | TTTTTTGGTGATGGATCATC+AGG | + | chr4.2:91986586-91986605 | None:intergenic | 35.0% |
| !!! | TTTTTTGTCAAGTAGCCTAG+TGG | + | chr4.2:91982452-91982471 | None:intergenic | 35.0% |
| AAAAATAGGTGACCCAGGTT+TGG | + | chr4.2:91985050-91985069 | None:intergenic | 40.0% | |
| AAAGAGAATCGACATACACC+TGG | - | chr4.2:91984636-91984655 | MS.gene053167:intron | 40.0% | |
| AAATTGGTTGTGATCTGCGT+CGG | - | chr4.2:91981765-91981784 | MS.gene053167:CDS | 40.0% | |
| AACAGACTTGACATATGTGC+AGG | + | chr4.2:91986358-91986377 | None:intergenic | 40.0% | |
| AGACTCCAATGTTCTAATCC+AGG | + | chr4.2:91984657-91984676 | None:intergenic | 40.0% | |
| AGAGGTCGATTGCATGTAAT+GGG | - | chr4.2:91984606-91984625 | MS.gene053167:intron | 40.0% | |
| AGGAAACAATAGCAAGCTCT+GGG | - | chr4.2:91983290-91983309 | MS.gene053167:intron | 40.0% | |
| AGGCTATCTCTCAACAAATG+TGG | - | chr4.2:91983026-91983045 | MS.gene053167:CDS | 40.0% | |
| ATAGGTTGTTCATCCAGTGT+TGG | - | chr4.2:91985882-91985901 | MS.gene053167:intron | 40.0% | |
| ATGATGCTCCTACTTGCAAT+TGG | + | chr4.2:91986408-91986427 | None:intergenic | 40.0% | |
| CACAGCAAAAGATAGAGAAG+TGG | - | chr4.2:91984115-91984134 | MS.gene053167:intron | 40.0% | |
| CACTTAAAAATAGGTGACCC+AGG | + | chr4.2:91985055-91985074 | None:intergenic | 40.0% | |
| CCACTTACAAACACTTGTTC+AGG | - | chr4.2:91983006-91983025 | MS.gene053167:CDS | 40.0% | |
| CCATACTGTCATTCAAGTGT+AGG | + | chr4.2:91986008-91986027 | None:intergenic | 40.0% | |
| CCATCACCAAAAAAGGTAGT+TGG | - | chr4.2:91986592-91986611 | MS.gene053167:CDS | 40.0% | |
| CCTACACTTGAATGACAGTA+TGG | - | chr4.2:91986005-91986024 | MS.gene053167:intron | 40.0% | |
| CCTGAACAAGTGTTTGTAAG+TGG | + | chr4.2:91983009-91983028 | None:intergenic | 40.0% | |
| CTGCGTGAGCACTTAAAAAT+AGG | + | chr4.2:91985064-91985083 | None:intergenic | 40.0% | |
| CTTACAAGCGTAGTTAGGAA+TGG | - | chr4.2:91983059-91983078 | MS.gene053167:CDS | 40.0% | |
| GAAATTGGAACGAGGGAAAT+AGG | + | chr4.2:91981847-91981866 | None:intergenic | 40.0% | |
| GAACAAGTGTTTGTAAGTGG+GGG | + | chr4.2:91983006-91983025 | None:intergenic | 40.0% | |
| GAGTCTATGACAGAGTGAAA+AGG | + | chr4.2:91986087-91986106 | None:intergenic | 40.0% | |
| GATCGTCTTTATGTTCTTGG+TGG | - | chr4.2:91985004-91985023 | MS.gene053167:intron | 40.0% | |
| GGCACATTCACATTTAGGAA+TGG | - | chr4.2:91983558-91983577 | MS.gene053167:intron | 40.0% | |
| GGCTATCTCTCAACAAATGT+GGG | - | chr4.2:91983027-91983046 | MS.gene053167:CDS | 40.0% | |
| TACTCTCTTAAACACTCGAC+AGG | + | chr4.2:91982836-91982855 | None:intergenic | 40.0% | |
| TATTAAGCAACGAACCTGTG+AGG | + | chr4.2:91984747-91984766 | None:intergenic | 40.0% | |
| TGATCGGAAAGTTACCATAC+CGG | - | chr4.2:91986491-91986510 | MS.gene053167:CDS | 40.0% | |
| TGCATAATATATGCAGGGGT+CGG | - | chr4.2:91982372-91982391 | MS.gene053167:intron | 40.0% | |
| TGTCATTCAAGTGTAGGACT+GGG | + | chr4.2:91986002-91986021 | None:intergenic | 40.0% | |
| TGTCTGTGTCAATGCTTCAT+AGG | - | chr4.2:91985864-91985883 | MS.gene053167:intron | 40.0% | |
| TTGACACAGACACAAACATC+GGG | + | chr4.2:91985856-91985875 | None:intergenic | 40.0% | |
| TTGACACCGAAACAAAGCAA+TGG | - | chr4.2:91983662-91983681 | MS.gene053167:CDS | 40.0% | |
| ! | AGGCATTTTCCTACTAAGAG+GGG | + | chr4.2:91984319-91984338 | None:intergenic | 40.0% |
| ! | GAGCTCCCACATTTTAAATG+TGG | + | chr4.2:91982426-91982445 | None:intergenic | 40.0% |
| ! | GTGATTTTATGGCCAAACCT+GGG | - | chr4.2:91985035-91985054 | MS.gene053167:intron | 40.0% |
| ! | TACTTCAAAACGTTGGTGAG+TGG | + | chr4.2:91982563-91982582 | None:intergenic | 40.0% |
| ! | TATGTTCTTGGTGGTCAAGA+AGG | - | chr4.2:91985013-91985032 | MS.gene053167:intron | 40.0% |
| ! | TGTCATTTGCTGGGACATTA+TGG | - | chr4.2:91984416-91984435 | MS.gene053167:intron | 40.0% |
| !! | AAGTACAAAGGTATCAGAGG+TGG | + | chr4.2:91983644-91983663 | None:intergenic | 40.0% |
| !! | AGTACAAAGGTATCAGAGGT+GGG | + | chr4.2:91983643-91983662 | None:intergenic | 40.0% |
| !! | CAACTAGAGTTGTTTTCACC+CGG | + | chr4.2:91986513-91986532 | None:intergenic | 40.0% |
| !! | GTCAAGTACAAAGGTATCAG+AGG | + | chr4.2:91983647-91983666 | None:intergenic | 40.0% |
| !! | TGTTTCGGTGTCAAGTACAA+AGG | + | chr4.2:91983656-91983675 | None:intergenic | 40.0% |
| !!! | ATATTTTAGGGCCTGTGTTG+TGG | - | chr4.2:91984976-91984995 | MS.gene053167:intron | 40.0% |
| !!! | CACTCATTGCCGATTTTCTA+TGG | - | chr4.2:91981802-91981821 | MS.gene053167:CDS | 40.0% |
| !!! | CCAACTACCTTTTTTGGTGA+TGG | + | chr4.2:91986595-91986614 | None:intergenic | 40.0% |
| !!! | CTATTTTTAAGTGCTCACGC+AGG | - | chr4.2:91985062-91985081 | MS.gene053167:intron | 40.0% |
| !!! | TAGTTGGATTTTGGAATGGC+TGG | - | chr4.2:91986527-91986546 | MS.gene053167:CDS | 40.0% |
| !!! | TGTGAGTTTGGTTTTGGCAT+TGG | + | chr4.2:91985274-91985293 | None:intergenic | 40.0% |
| !!! | TTCTTGTATCTGGTTTTGGG+TGG | - | chr4.2:91984525-91984544 | MS.gene053167:intron | 40.0% |
| AAAACTCGGTTCCGCCAAAT+TGG | - | chr4.2:91981749-91981768 | MS.gene053167:CDS | 45.0% | |
| ACACATGTCAGTATCCGACA+TGG | - | chr4.2:91985762-91985781 | MS.gene053167:intron | 45.0% | |
| ACCGAAACAAAGCAATGGAG+CGG | - | chr4.2:91983667-91983686 | MS.gene053167:CDS | 45.0% | |
| ACTAAGAGGGGCAGACTAAA+TGG | + | chr4.2:91984307-91984326 | None:intergenic | 45.0% | |
| ACTTCAGGACAGAGAGACAA+GGG | - | chr4.2:91986559-91986578 | MS.gene053167:CDS | 45.0% | |
| ATAGCAGCACCATCAAGTCT+AGG | + | chr4.2:91982002-91982021 | None:intergenic | 45.0% | |
| CAGCATCGCAGAAGAAAGTT+AGG | + | chr4.2:91985151-91985170 | None:intergenic | 45.0% | |
| CATTTAGGAATGGCGACAGA+TGG | - | chr4.2:91983568-91983587 | MS.gene053167:intron | 45.0% | |
| CATTTGATATGTTGGGACGC+AGG | + | chr4.2:91982185-91982204 | None:intergenic | 45.0% | |
| CCAATTGAGCTAAACTCACG+AGG | + | chr4.2:91982343-91982362 | None:intergenic | 45.0% | |
| CGGGTGAAAACAACTCTAGT+TGG | - | chr4.2:91986511-91986530 | MS.gene053167:CDS | 45.0% | |
| CTGTCATTCAAGTGTAGGAC+TGG | + | chr4.2:91986003-91986022 | None:intergenic | 45.0% | |
| GAACGAGGGAAATAGGAAGA+TGG | + | chr4.2:91981840-91981859 | None:intergenic | 45.0% | |
| GACGCAGATCACAACCAATT+TGG | + | chr4.2:91981766-91981785 | None:intergenic | 45.0% | |
| GAGAGGTCGATTGCATGTAA+TGG | - | chr4.2:91984605-91984624 | MS.gene053167:intron | 45.0% | |
| GAGGAAACAATAGCAAGCTC+TGG | - | chr4.2:91983289-91983308 | MS.gene053167:intron | 45.0% | |
| GATCGGAAAGTTACCATACC+GGG | - | chr4.2:91986492-91986511 | MS.gene053167:CDS | 45.0% | |
| GCACCCTGAAACCAAGAAAA+TGG | - | chr4.2:91985357-91985376 | MS.gene053167:intron | 45.0% | |
| GCAGATCACAACCAATTTGG+CGG | + | chr4.2:91981763-91981782 | None:intergenic | 45.0% | |
| GCATAATATATGCAGGGGTC+GGG | - | chr4.2:91982373-91982392 | MS.gene053167:intron | 45.0% | |
| GGGAGATCAAGATTCAGCAT+TGG | + | chr4.2:91983958-91983977 | None:intergenic | 45.0% | |
| TCAAGTCTGTTGTCTGCTGA+AGG | - | chr4.2:91986367-91986386 | MS.gene053167:CDS | 45.0% | |
| TCACCTGTTCCTAGACTTGA+TGG | - | chr4.2:91981990-91982009 | MS.gene053167:intron | 45.0% | |
| TGTGCCTCCAGCAATAACAA+TGG | + | chr4.2:91985329-91985348 | None:intergenic | 45.0% | |
| TGTTGGATGACGAGATGAAG+TGG | - | chr4.2:91985236-91985255 | MS.gene053167:intron | 45.0% | |
| TTGCAGAAGTGGTCTGTGAT+CGG | - | chr4.2:91986475-91986494 | MS.gene053167:CDS | 45.0% | |
| TTTAGTCTGCCCCTCTTAGT+AGG | - | chr4.2:91984307-91984326 | MS.gene053167:intron | 45.0% | |
| ! | ACCTGCTCCTCAACTTGTTT+GGG | - | chr4.2:91981953-91981972 | MS.gene053167:intron | 45.0% |
| ! | CCTCGTGAGTTTAGCTCAAT+TGG | - | chr4.2:91982340-91982359 | MS.gene053167:intron | 45.0% |
| ! | GGTGATTTTATGGCCAAACC+TGG | - | chr4.2:91985034-91985053 | MS.gene053167:intron | 45.0% |
| ! | TACCTGCTCCTCAACTTGTT+TGG | - | chr4.2:91981952-91981971 | MS.gene053167:intron | 45.0% |
| ! | TGGAGTCTTGCTGTCAAGAA+TGG | - | chr4.2:91984669-91984688 | MS.gene053167:intron | 45.0% |
| !! | ACCGCTCCATTGCTTTGTTT+CGG | + | chr4.2:91983671-91983690 | None:intergenic | 45.0% |
| !! | ACCTCACAAGTCGGTTTTGT+GGG | + | chr4.2:91982975-91982994 | None:intergenic | 45.0% |
| !! | ACTTTTAGTGGACGGAGACA+TGG | - | chr4.2:91984256-91984275 | MS.gene053167:intron | 45.0% |
| !! | AGAGTTGTTTTCACCCGGTA+TGG | + | chr4.2:91986508-91986527 | None:intergenic | 45.0% |
| !! | CTCTAGTTCTCTCCCACTTA+TGG | - | chr4.2:91985625-91985644 | MS.gene053167:intron | 45.0% |
| !! | TTTGATGATGGAACTTGGGG+AGG | - | chr4.2:91983511-91983530 | MS.gene053167:intron | 45.0% |
| !! | TTTTAAGTGCTCACGCAGGA+TGG | - | chr4.2:91985066-91985085 | MS.gene053167:intron | 45.0% |
| !!! | GAGTTTGGTTTTGGCATTGG+AGG | + | chr4.2:91985271-91985290 | None:intergenic | 45.0% |
| !! | TTAAAATAAATAAAAACAAA+GGG | + | chr4.2:91985978-91985997 | None:intergenic | 5.0% |
| !!! | TTTAAAATAAATAAAAACAA+AGG | + | chr4.2:91985979-91985998 | None:intergenic | 5.0% |
| AACATCGGGCACGTTGATAC+CGG | + | chr4.2:91985842-91985861 | None:intergenic | 50.0% | |
| AGGTGGGACCTCTACATTGT+GGG | + | chr4.2:91983627-91983646 | None:intergenic | 50.0% | |
| CACTTCAGGACAGAGAGACA+AGG | - | chr4.2:91986558-91986577 | MS.gene053167:CDS | 50.0% | |
| CAGTATGGCCCACAATGTAG+AGG | - | chr4.2:91983616-91983635 | MS.gene053167:intron | 50.0% | |
| CCTGGGAAAATCACCAACAC+TGG | + | chr4.2:91985898-91985917 | None:intergenic | 50.0% | |
| GCACCATCAAGTCTAGGAAC+AGG | + | chr4.2:91981996-91982015 | None:intergenic | 50.0% | |
| GTAGTCCTCACCTCACAAGT+CGG | + | chr4.2:91982984-91983003 | None:intergenic | 50.0% | |
| GTTCGTCCGTCGGTAAAACT+CGG | - | chr4.2:91981735-91981754 | MS.gene053167:CDS | 50.0% | |
| TAGAGCAGTTGGATGTGCAG+AGG | - | chr4.2:91983991-91984010 | MS.gene053167:intron | 50.0% | |
| TTGTCAAGTAGCCTAGTGGC+TGG | + | chr4.2:91982448-91982467 | None:intergenic | 50.0% | |
| ! | ACATACCTAGGGACTGGCAA+AGG | + | chr4.2:91983700-91983719 | None:intergenic | 50.0% |
| ! | ATGCACCGGCAACTCAACTT+TGG | - | chr4.2:91984583-91984602 | MS.gene053167:intron | 50.0% |
| ! | ATGTGGAAAAGTGGGGTGTC+TGG | + | chr4.2:91982409-91982428 | None:intergenic | 50.0% |
| ! | CCTCTCCAAAGTTGAGTTGC+CGG | + | chr4.2:91984591-91984610 | None:intergenic | 50.0% |
| ! | GGCTGGTTGTACTTCACTTC+AGG | - | chr4.2:91986544-91986563 | MS.gene053167:CDS | 50.0% |
| ! | GGTCGATTGCATGTAATGGG+TGG | - | chr4.2:91984609-91984628 | MS.gene053167:intron | 50.0% |
| ! | TCCCAAACAAGTTGAGGAGC+AGG | + | chr4.2:91981957-91981976 | None:intergenic | 50.0% |
| ! | TGTGGAAAAGTGGGGTGTCT+GGG | + | chr4.2:91982408-91982427 | None:intergenic | 50.0% |
| !! | CAAAACCGACTTGTGAGGTG+AGG | - | chr4.2:91982976-91982995 | MS.gene053167:CDS | 50.0% |
| !! | CACATGCATTGGTGCCATGT+CGG | + | chr4.2:91985779-91985798 | None:intergenic | 50.0% |
| !! | CACCTCACAAGTCGGTTTTG+TGG | + | chr4.2:91982976-91982995 | None:intergenic | 50.0% |
| !! | CCTCACAAGTCGGTTTTGTG+GGG | + | chr4.2:91982974-91982993 | None:intergenic | 50.0% |
| !! | CGGTTTTGTGGGGTTGTGTT+AGG | + | chr4.2:91982964-91982983 | None:intergenic | 50.0% |
| !! | GATGTGCAGAGGTGTCTGAA+AGG | - | chr4.2:91984002-91984021 | MS.gene053167:intron | 50.0% |
| !!! | CCAGTGTTGGTGATTTTCCC+AGG | - | chr4.2:91985895-91985914 | MS.gene053167:intron | 50.0% |
| ACGATCATCGGCCACAACAC+AGG | + | chr4.2:91984990-91985009 | None:intergenic | 55.0% | |
| AGTGAGATACCCATTCCCCG+TGG | - | chr4.2:91984717-91984736 | MS.gene053167:CDS | 55.0% | |
| GAGGTGGGACCTCTACATTG+TGG | + | chr4.2:91983628-91983647 | None:intergenic | 55.0% | |
| GATCAGAAGTGGGGGTTTGC+AGG | - | chr4.2:91982153-91982172 | MS.gene053167:intron | 55.0% | |
| GTGATCTGCGTCGGACTTCT+AGG | - | chr4.2:91981774-91981793 | MS.gene053167:CDS | 55.0% | |
| TAAGTGCTCACGCAGGATGG+AGG | - | chr4.2:91985069-91985088 | MS.gene053167:intron | 55.0% | |
| ! | ACCTAGGGACTGGCAAAGGA+GGG | + | chr4.2:91983696-91983715 | None:intergenic | 55.0% |
| ! | CCGGCAACTCAACTTTGGAG+AGG | - | chr4.2:91984588-91984607 | MS.gene053167:intron | 55.0% |
| ! | GCGGAACCGAGTTTTACCGA+CGG | + | chr4.2:91981744-91981763 | None:intergenic | 55.0% |
| ! | GTGGAAAAGTGGGGTGTCTG+GGG | + | chr4.2:91982407-91982426 | None:intergenic | 55.0% |
| ! | TACCTAGGGACTGGCAAAGG+AGG | + | chr4.2:91983697-91983716 | None:intergenic | 55.0% |
| ! | TGGAAAAGTGGGGTGTCTGG+GGG | + | chr4.2:91982406-91982425 | None:intergenic | 55.0% |
| !! | CCCCACAAAACCGACTTGTG+AGG | - | chr4.2:91982971-91982990 | MS.gene053167:CDS | 55.0% |
| AACCTGTGAGGTCCTCCACG+GGG | + | chr4.2:91984735-91984754 | None:intergenic | 60.0% | |
| ATGTGGGAGCTCCAGCCACT+AGG | - | chr4.2:91982434-91982453 | MS.gene053167:intron | 60.0% | |
| CGAACCTGTGAGGTCCTCCA+CGG | + | chr4.2:91984737-91984756 | None:intergenic | 60.0% | |
| GAACCTGTGAGGTCCTCCAC+GGG | + | chr4.2:91984736-91984755 | None:intergenic | 60.0% | |
| GAGATACCCATTCCCCGTGG+AGG | - | chr4.2:91984720-91984739 | MS.gene053167:CDS | 60.0% | |
| TCCCTCCTTTGCCAGTCCCT+AGG | - | chr4.2:91983692-91983711 | MS.gene053167:CDS | 60.0% | |
| TGAGGTCCTCCACGGGGAAT+GGG | + | chr4.2:91984729-91984748 | None:intergenic | 60.0% | |
| GTGAGGTCCTCCACGGGGAA+TGG | + | chr4.2:91984730-91984749 | None:intergenic | 65.0% | |
| TTCCCCGTGGAGGACCTCAC+AGG | - | chr4.2:91984730-91984749 | MS.gene053167:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 91981732 | 91986651 | 91981732 | ID=MS.gene053167 |
| chr4.2 | mRNA | 91981732 | 91986651 | 91981732 | ID=MS.gene053167.t1;Parent=MS.gene053167 |
| chr4.2 | exon | 91986310 | 91986651 | 91986310 | ID=MS.gene053167.t1.exon1;Parent=MS.gene053167.t1 |
| chr4.2 | CDS | 91986310 | 91986651 | 91986310 | ID=cds.MS.gene053167.t1;Parent=MS.gene053167.t1 |
| chr4.2 | exon | 91984670 | 91984899 | 91984670 | ID=MS.gene053167.t1.exon2;Parent=MS.gene053167.t1 |
| chr4.2 | CDS | 91984670 | 91984899 | 91984670 | ID=cds.MS.gene053167.t1;Parent=MS.gene053167.t1 |
| chr4.2 | exon | 91983632 | 91983802 | 91983632 | ID=MS.gene053167.t1.exon3;Parent=MS.gene053167.t1 |
| chr4.2 | CDS | 91983632 | 91983802 | 91983632 | ID=cds.MS.gene053167.t1;Parent=MS.gene053167.t1 |
| chr4.2 | exon | 91983293 | 91983398 | 91983293 | ID=MS.gene053167.t1.exon4;Parent=MS.gene053167.t1 |
| chr4.2 | CDS | 91983293 | 91983398 | 91983293 | ID=cds.MS.gene053167.t1;Parent=MS.gene053167.t1 |
| chr4.2 | exon | 91982963 | 91983169 | 91982963 | ID=MS.gene053167.t1.exon5;Parent=MS.gene053167.t1 |
| chr4.2 | CDS | 91982963 | 91983169 | 91982963 | ID=cds.MS.gene053167.t1;Parent=MS.gene053167.t1 |
| chr4.2 | exon | 91981732 | 91981902 | 91981732 | ID=MS.gene053167.t1.exon6;Parent=MS.gene053167.t1 |
| chr4.2 | CDS | 91981732 | 91981902 | 91981732 | ID=cds.MS.gene053167.t1;Parent=MS.gene053167.t1 |
| Gene Sequence |
| Protein sequence |
