Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51300.t1 | RHN52774.1 | 93.5 | 493 | 30 | 1 | 1 | 491 | 1 | 493 | 1.60E-268 | 934.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51300.t1 | Q9C9T2 | 46.2 | 480 | 224 | 11 | 1 | 476 | 1 | 450 | 5.5e-105 | 382.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51300.t1 | A0A396HLL0 | 93.5 | 493 | 30 | 1 | 1 | 491 | 1 | 493 | 1.1e-268 | 934.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05410 | MS.gene51300 | 0.843484 | 1.36E-58 | -1.69E-46 |
| MS.gene05439 | MS.gene51300 | 0.911397 | 6.37E-83 | -1.69E-46 |
| MS.gene054892 | MS.gene51300 | 0.853703 | 2.01E-61 | -1.69E-46 |
| MS.gene054893 | MS.gene51300 | 0.849304 | 3.52E-60 | -1.69E-46 |
| MS.gene055226 | MS.gene51300 | 0.818617 | 1.79E-52 | -1.69E-46 |
| MS.gene060412 | MS.gene51300 | 0.838634 | 2.56E-57 | -1.69E-46 |
| MS.gene060413 | MS.gene51300 | 0.822386 | 2.44E-53 | -1.69E-46 |
| MS.gene060520 | MS.gene51300 | 0.804367 | 2.24E-49 | -1.69E-46 |
| MS.gene060840 | MS.gene51300 | 0.812985 | 3.22E-51 | -1.69E-46 |
| MS.gene060851 | MS.gene51300 | 0.80121 | 1.00E-48 | -1.69E-46 |
| MS.gene060852 | MS.gene51300 | 0.8014 | 9.17E-49 | -1.69E-46 |
| MS.gene061047 | MS.gene51300 | 0.809766 | 1.61E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51300.t1 | MTR_6g083730 | 91.481 | 493 | 32 | 2 | 1 | 491 | 1 | 485 | 0.0 | 933 |
| MS.gene51300.t1 | MTR_8g104510 | 62.994 | 481 | 165 | 10 | 1 | 476 | 1 | 473 | 0.0 | 598 |
| MS.gene51300.t1 | MTR_8g104490 | 62.020 | 495 | 172 | 13 | 1 | 489 | 1 | 485 | 0.0 | 575 |
| MS.gene51300.t1 | MTR_6g083320 | 93.645 | 299 | 17 | 1 | 1 | 297 | 1 | 299 | 0.0 | 574 |
| MS.gene51300.t1 | MTR_6g083320 | 83.333 | 132 | 14 | 1 | 360 | 491 | 296 | 419 | 1.38e-70 | 231 |
| MS.gene51300.t1 | MTR_8g104490 | 63.146 | 426 | 143 | 11 | 69 | 489 | 4 | 420 | 5.64e-179 | 508 |
| MS.gene51300.t1 | MTR_4g128600 | 45.894 | 414 | 204 | 9 | 4 | 412 | 14 | 412 | 3.72e-118 | 361 |
| MS.gene51300.t1 | MTR_4g090970 | 46.329 | 395 | 196 | 8 | 2 | 390 | 13 | 397 | 3.65e-113 | 348 |
| MS.gene51300.t1 | MTR_2g011810 | 44.949 | 396 | 203 | 7 | 1 | 390 | 12 | 398 | 2.62e-112 | 345 |
| MS.gene51300.t1 | MTR_2g450080 | 41.348 | 445 | 234 | 9 | 4 | 440 | 11 | 436 | 1.68e-106 | 329 |
| MS.gene51300.t1 | MTR_6g083810 | 91.791 | 134 | 9 | 1 | 1 | 132 | 1 | 134 | 4.70e-81 | 248 |
| MS.gene51300.t1 | MTR_4g106810 | 46.732 | 306 | 154 | 7 | 14 | 318 | 9 | 306 | 1.19e-80 | 261 |
| MS.gene51300.t1 | MTR_7g112000 | 35.143 | 350 | 208 | 9 | 50 | 393 | 44 | 380 | 2.97e-51 | 182 |
| MS.gene51300.t1 | MTR_7g111960 | 34.694 | 343 | 209 | 11 | 46 | 381 | 56 | 390 | 2.21e-47 | 172 |
| MS.gene51300.t1 | MTR_7g111980 | 34.125 | 337 | 201 | 8 | 50 | 379 | 59 | 381 | 3.82e-46 | 169 |
| MS.gene51300.t1 | MTR_7g111980 | 36.271 | 295 | 175 | 7 | 92 | 379 | 10 | 298 | 1.10e-44 | 164 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene51300.t1 | AT1G73805 | 49.375 | 480 | 209 | 11 | 1 | 476 | 1 | 450 | 7.32e-148 | 431 |
| MS.gene51300.t1 | AT5G57580 | 40.840 | 524 | 248 | 16 | 9 | 485 | 17 | 525 | 3.68e-113 | 348 |
| MS.gene51300.t1 | AT4G25800 | 45.361 | 388 | 194 | 7 | 4 | 385 | 2 | 377 | 3.95e-109 | 336 |
| MS.gene51300.t1 | AT4G25800 | 45.361 | 388 | 194 | 7 | 4 | 385 | 2 | 377 | 3.95e-109 | 336 |
| MS.gene51300.t1 | AT2G18750 | 39.619 | 472 | 260 | 11 | 4 | 460 | 16 | 477 | 2.85e-108 | 335 |
| MS.gene51300.t1 | AT2G18750 | 39.619 | 472 | 260 | 11 | 4 | 460 | 16 | 477 | 2.85e-108 | 335 |
| MS.gene51300.t1 | AT2G18750 | 39.619 | 472 | 260 | 11 | 4 | 460 | 16 | 477 | 2.85e-108 | 335 |
| MS.gene51300.t1 | AT2G24300 | 42.784 | 388 | 213 | 6 | 4 | 387 | 3 | 385 | 8.04e-97 | 305 |
| MS.gene51300.t1 | AT2G24300 | 42.784 | 388 | 213 | 6 | 4 | 387 | 7 | 389 | 1.05e-96 | 304 |
| MS.gene51300.t1 | AT4G31000 | 42.211 | 398 | 212 | 9 | 11 | 401 | 13 | 399 | 5.34e-95 | 298 |
| MS.gene51300.t1 | AT5G62570 | 37.405 | 393 | 221 | 9 | 1 | 384 | 1 | 377 | 3.06e-85 | 271 |
| MS.gene51300.t1 | AT2G24300 | 44.012 | 334 | 180 | 5 | 58 | 387 | 8 | 338 | 4.30e-85 | 273 |
| MS.gene51300.t1 | AT5G62570 | 38.133 | 375 | 207 | 9 | 1 | 366 | 1 | 359 | 8.74e-85 | 266 |
| MS.gene51300.t1 | AT5G62570 | 38.950 | 362 | 200 | 8 | 32 | 384 | 13 | 362 | 5.35e-83 | 265 |
| MS.gene51300.t1 | AT4G31000 | 39.429 | 350 | 181 | 8 | 58 | 401 | 54 | 378 | 9.94e-72 | 237 |
| MS.gene51300.t1 | AT5G62570 | 40.264 | 303 | 161 | 7 | 1 | 298 | 1 | 288 | 7.44e-69 | 223 |
| MS.gene51300.t1 | AT5G26920 | 35.556 | 360 | 212 | 8 | 29 | 384 | 24 | 367 | 1.09e-68 | 226 |
| MS.gene51300.t1 | AT5G26920 | 35.556 | 360 | 212 | 8 | 29 | 384 | 24 | 367 | 7.67e-68 | 228 |
| MS.gene51300.t1 | AT5G26920 | 35.278 | 360 | 205 | 9 | 29 | 384 | 24 | 359 | 1.89e-64 | 218 |
Find 111 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAGACTTATGCTTAT+AGG | 0.197679 | 6.3:+78146225 | None:intergenic |
| ACAACAATCTCTAGCTTTAT+AGG | 0.214346 | 6.3:+78146159 | None:intergenic |
| CTAGAGATTGTTGTACTTGA+TGG | 0.248608 | 6.3:-78146150 | MS.gene51300:CDS |
| GGATAAAGTGCAGGAAGTTT+AGG | 0.251346 | 6.3:-78145960 | MS.gene51300:CDS |
| GAAGACTTGTTGGAACAATT+TGG | 0.268874 | 6.3:+78146187 | None:intergenic |
| GGGAAGAGACCATTACTTTC+TGG | 0.273521 | 6.3:-78146054 | MS.gene51300:CDS |
| TCAGAGTTATATAGACAAAT+TGG | 0.277663 | 6.3:-78144357 | MS.gene51300:intron |
| GCTTTAATTAATTTGCATAT+TGG | 0.279068 | 6.3:+78144565 | None:intergenic |
| AGTTTCATACCTGTGAAAAT+TGG | 0.291885 | 6.3:+78147499 | None:intergenic |
| TATCATCATAATCAATATTA+TGG | 0.303975 | 6.3:-78143614 | MS.gene51300:CDS |
| ACTGTTGCTGGATGATTGTT+TGG | 0.310236 | 6.3:+78143647 | None:intergenic |
| TATGTTGTTGCTACTGTTGC+TGG | 0.313492 | 6.3:+78143635 | None:intergenic |
| TGCATTTGGTGTTGTGGTAT+AGG | 0.318778 | 6.3:+78143508 | None:intergenic |
| CACATGATGAAAACGAGAAT+TGG | 0.319514 | 6.3:-78146119 | MS.gene51300:CDS |
| AATGCAAATGGATTTCCTTT+TGG | 0.323071 | 6.3:-78143491 | MS.gene51300:CDS |
| GATAAAGTGCAGGAAGTTTA+GGG | 0.344313 | 6.3:-78145959 | MS.gene51300:CDS |
| TATATTGTACCTTATTCATT+TGG | 0.345403 | 6.3:+78144500 | None:intergenic |
| TTGGAGAAGCATACACAAAA+TGG | 0.358634 | 6.3:-78144334 | MS.gene51300:CDS |
| AAAGGAAATCCATTTGCATT+TGG | 0.365748 | 6.3:+78143494 | None:intergenic |
| GATTTCATTCGTTTGTCGTT+TGG | 0.366146 | 6.3:+78148689 | None:intergenic |
| GTACTTGAACCAAATGAATA+AGG | 0.370265 | 6.3:-78144509 | MS.gene51300:intron |
| GAAGAGGTGGATAGAGCAAT+TGG | 0.372285 | 6.3:-78147628 | MS.gene51300:CDS |
| GACTGAGGCATTTGTTGTTA+AGG | 0.376185 | 6.3:-78145881 | MS.gene51300:CDS |
| CAACAATCTCTAGCTTTATA+GGG | 0.387802 | 6.3:+78146160 | None:intergenic |
| GCTTTCCACCTTCCATCAAT+AGG | 0.389606 | 6.3:-78147600 | MS.gene51300:CDS |
| ATAGGGTAAGGAAGACTTGT+TGG | 0.390458 | 6.3:+78146177 | None:intergenic |
| CTGTCCCTAGGGACATTAAT+GGG | 0.391628 | 6.3:-78143424 | MS.gene51300:CDS |
| GAAGTTTAGGGTTGCAGTTA+AGG | 0.391787 | 6.3:-78145947 | MS.gene51300:CDS |
| TCTGTCCCTAGGGACATTAA+TGG | 0.395267 | 6.3:-78143425 | MS.gene51300:CDS |
| GTTGTTGATCCCTTGGTGCT+TGG | 0.401027 | 6.3:+78147560 | None:intergenic |
| GTTTCATACCTGTGAAAATT+GGG | 0.401177 | 6.3:+78147500 | None:intergenic |
| TAATGAAGGTGACCTATTGA+TGG | 0.408912 | 6.3:+78147588 | None:intergenic |
| AGAGGTGGAATTGCACCAAT+TGG | 0.409164 | 6.3:-78146012 | MS.gene51300:CDS |
| GTGTGGCGCCTAGAGAAGAT+AGG | 0.412903 | 6.3:-78145322 | MS.gene51300:CDS |
| TACATAGTGAAGGAAAGAAC+TGG | 0.419237 | 6.3:-78146075 | MS.gene51300:CDS |
| TACAACTCTCATTCAACAAA+AGG | 0.425881 | 6.3:-78147531 | MS.gene51300:CDS |
| AAGGTTGGTTGTTGATCCCT+TGG | 0.434839 | 6.3:+78147553 | None:intergenic |
| GAGGTGGAATTGCACCAATT+GGG | 0.439927 | 6.3:-78146011 | MS.gene51300:CDS |
| ATCTCTAGCTTTATAGGGTA+AGG | 0.447610 | 6.3:+78146165 | None:intergenic |
| CATCTTTCCCTATCTTCTCT+AGG | 0.450984 | 6.3:+78145314 | None:intergenic |
| ACCACAACACCAAATGCAAA+TGG | 0.454821 | 6.3:-78143503 | MS.gene51300:CDS |
| ATGCGAGTAATCAAAGTGTT+AGG | 0.455811 | 6.3:-78145918 | MS.gene51300:CDS |
| GCCAAGCAATAATGTACAAA+TGG | 0.456056 | 6.3:-78143558 | MS.gene51300:CDS |
| GCCATTTGTACATTATTGCT+TGG | 0.457120 | 6.3:+78143557 | None:intergenic |
| ACATGGGGAGCAAGATCTAT+AGG | 0.460309 | 6.3:-78144621 | MS.gene51300:CDS |
| TTAATTAAAGCTAATATCAA+TGG | 0.468078 | 6.3:-78144553 | MS.gene51300:CDS |
| TTTGTTGAATGAGAGTTGTA+AGG | 0.470397 | 6.3:+78147534 | None:intergenic |
| TCCATTTGCATTTGGTGTTG+TGG | 0.474676 | 6.3:+78143502 | None:intergenic |
| GCATATTGGATTCAGAAGAA+TGG | 0.478493 | 6.3:+78144579 | None:intergenic |
| AATGAGTTGGAGGAAATTGA+TGG | 0.479528 | 6.3:-78144311 | MS.gene51300:CDS |
| CAATTCCACCTCTCATAGTA+AGG | 0.486241 | 6.3:+78146022 | None:intergenic |
| CCACCACAAAATGATGGCTA+AGG | 0.503068 | 6.3:-78145284 | MS.gene51300:CDS |
| CACAAAATGGAATGAGTTGG+AGG | 0.508685 | 6.3:-78144321 | MS.gene51300:CDS |
| CACACATCATCGCCAAGCAT+TGG | 0.517632 | 6.3:+78145340 | None:intergenic |
| AAACACCATCCACCAATGCT+TGG | 0.521377 | 6.3:-78145352 | MS.gene51300:CDS |
| AACATTGCTTTGTTAACCCA+AGG | 0.527734 | 6.3:-78144275 | MS.gene51300:intron |
| TGGTTAGGTGAGTGAAGAGG+TGG | 0.534317 | 6.3:-78147641 | MS.gene51300:intron |
| GGTGCTTGGATTCTTAATGA+AGG | 0.535525 | 6.3:+78147574 | None:intergenic |
| ATTCTAGCTGGATAAAGTGC+AGG | 0.537572 | 6.3:-78145969 | MS.gene51300:CDS |
| ACCTTCAAGTTCTGTCCCTA+GGG | 0.537786 | 6.3:-78143435 | MS.gene51300:CDS |
| AGTTATATAGACAAATTGGT+TGG | 0.539117 | 6.3:-78144353 | MS.gene51300:CDS |
| GTGAACTCTATGTCCCCAAT+TGG | 0.542652 | 6.3:+78145997 | None:intergenic |
| TTGAATGAGAGTTGTAAGGT+TGG | 0.548181 | 6.3:+78147538 | None:intergenic |
| CACCACAAAATGATGGCTAA+GGG | 0.548210 | 6.3:-78145283 | MS.gene51300:CDS |
| TTCACAGGGTCACAATCAGA+TGG | 0.555752 | 6.3:-78143467 | MS.gene51300:CDS |
| AGTTCACAGATAATTCTAGC+TGG | 0.556731 | 6.3:-78145981 | MS.gene51300:CDS |
| ACATCATCGCCAAGCATTGG+TGG | 0.557359 | 6.3:+78145343 | None:intergenic |
| TCCCTAGGGACAGAACTTGA+AGG | 0.561736 | 6.3:+78143434 | None:intergenic |
| TTCAGAAGAATGGTAAATTG+AGG | 0.561852 | 6.3:+78144589 | None:intergenic |
| ATACACAAAATGGAATGAGT+TGG | 0.570127 | 6.3:-78144324 | MS.gene51300:CDS |
| CACCTTCAAGTTCTGTCCCT+AGG | 0.570752 | 6.3:-78143436 | MS.gene51300:CDS |
| GTGAACCCATTAATGTCCCT+AGG | 0.571248 | 6.3:+78143419 | None:intergenic |
| CATCGCCAAGCATTGGTGGA+TGG | 0.571915 | 6.3:+78145347 | None:intergenic |
| CTAGAGAAGATAGGGAAAGA+TGG | 0.572158 | 6.3:-78145313 | MS.gene51300:CDS |
| TTCAATTCTCCAGAAAGTAA+TGG | 0.573973 | 6.3:+78146045 | None:intergenic |
| TGTGACCCTGTGAAGCCAAA+AGG | 0.578109 | 6.3:+78143476 | None:intergenic |
| AGGTGGAATTGCACCAATTG+GGG | 0.581694 | 6.3:-78146010 | MS.gene51300:CDS |
| CAAAGTGTTAGGATTCAAGA+AGG | 0.583699 | 6.3:-78145907 | MS.gene51300:CDS |
| TCACAGGGTCACAATCAGAT+GGG | 0.588057 | 6.3:-78143466 | MS.gene51300:CDS |
| AGTGCATACGAAGCAAAAGA+AGG | 0.588320 | 6.3:+78148659 | None:intergenic |
| TGTGGCGCCTAGAGAAGATA+GGG | 0.589096 | 6.3:-78145321 | MS.gene51300:CDS |
| AGCTTTCCACCACAAAATGA+TGG | 0.589747 | 6.3:-78145290 | MS.gene51300:CDS |
| CAATGCTTGGCGATGATGTG+TGG | 0.590954 | 6.3:-78145339 | MS.gene51300:CDS |
| ATTCAATAAATACATAGTGA+AGG | 0.602832 | 6.3:-78146085 | MS.gene51300:CDS |
| TGAACCCATTAATGTCCCTA+GGG | 0.602842 | 6.3:+78143420 | None:intergenic |
| CATACCTGTGAAAATTGGGA+GGG | 0.602874 | 6.3:+78147504 | None:intergenic |
| TCATACCTGTGAAAATTGGG+AGG | 0.603052 | 6.3:+78147503 | None:intergenic |
| GAATTGAACCTTACTATGAG+AGG | 0.607156 | 6.3:-78146030 | MS.gene51300:CDS |
| GAATGGTAAATTGAGGTCCA+CGG | 0.610553 | 6.3:+78144596 | None:intergenic |
| AGTAGAATACTCGACGCTGA+AGG | 0.610787 | 6.3:-78146252 | MS.gene51300:CDS |
| TTGAACCTTACTATGAGAGG+TGG | 0.618381 | 6.3:-78146027 | MS.gene51300:CDS |
| GCATGCAATGACTTGTGACA+TGG | 0.626229 | 6.3:-78144638 | MS.gene51300:CDS |
| ATTTGGTTAGGTGAGTGAAG+AGG | 0.632675 | 6.3:-78147644 | MS.gene51300:intron |
| ACATAGTGAAGGAAAGAACT+GGG | 0.634050 | 6.3:-78146074 | MS.gene51300:CDS |
| ATTAAGAATCCAAGCACCAA+GGG | 0.638386 | 6.3:-78147569 | MS.gene51300:CDS |
| CAGTTAATGTGCAAAACATG+CGG | 0.638840 | 6.3:-78148480 | MS.gene51300:CDS |
| CATTAAGAATCCAAGCACCA+AGG | 0.647255 | 6.3:-78147570 | MS.gene51300:CDS |
| TACAAATGGCTAGCAGTGAG+TGG | 0.650899 | 6.3:-78143544 | MS.gene51300:CDS |
| GGGACATTAATGGGTTCACA+AGG | 0.658302 | 6.3:-78143415 | MS.gene51300:CDS |
| ACCACAAAATGATGGCTAAG+GGG | 0.658660 | 6.3:-78145282 | MS.gene51300:CDS |
| AGCAAGATCTATAGGTACCG+TGG | 0.658732 | 6.3:-78144613 | MS.gene51300:CDS |
| TGATACTCAAAAGCTAAGAG+AGG | 0.658952 | 6.3:-78145221 | MS.gene51300:intron |
| GGTGACCTATTGATGGAAGG+TGG | 0.664907 | 6.3:+78147595 | None:intergenic |
| CATGCAATGACTTGTGACAT+GGG | 0.667953 | 6.3:-78144637 | MS.gene51300:CDS |
| GAAGGTGACCTATTGATGGA+AGG | 0.674542 | 6.3:+78147592 | None:intergenic |
| CACAGGGTCACAATCAGATG+GGG | 0.676341 | 6.3:-78143465 | MS.gene51300:CDS |
| TGGGGATGTCTGATAGAATG+TGG | 0.679640 | 6.3:-78144675 | MS.gene51300:CDS |
| TTTGTTGTTAAGGATCATCG+TGG | 0.682651 | 6.3:-78145871 | MS.gene51300:CDS |
| GATTCAAGAAGGCATGACTG+AGG | 0.696401 | 6.3:-78145896 | MS.gene51300:CDS |
| AATTATAGGTGATCAAACTG+TGG | 0.703154 | 6.3:-78143678 | MS.gene51300:intron |
| ATGCAATGACTTGTGACATG+GGG | 0.729736 | 6.3:-78144636 | MS.gene51300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAATATATTTAACTAA+AGG | + | chr6.3:78147381-78147400 | None:intergenic | 10.0% |
| !! | AGAAATAAAATTTAGATATT+TGG | + | chr6.3:78146735-78146754 | None:intergenic | 10.0% |
| !! | ATAAACTTAAATTACTAAAA+AGG | + | chr6.3:78145383-78145402 | None:intergenic | 10.0% |
| !! | CATCTTATTAATATATTTAA+GGG | + | chr6.3:78146461-78146480 | None:intergenic | 10.0% |
| !! | TACAAATTATAATACAATTA+AGG | + | chr6.3:78145333-78145352 | None:intergenic | 10.0% |
| !! | TGATATTATCTTAAAATTTA+AGG | - | chr6.3:78144025-78144044 | MS.gene51300:intron | 10.0% |
| !! | TTTAATATGAACTTAATTAT+AGG | - | chr6.3:78148454-78148473 | MS.gene51300:CDS | 10.0% |
| !!! | TTTTTTATTAAAAATGGTAA+AGG | + | chr6.3:78144117-78144136 | None:intergenic | 10.0% |
| !! | AAAAAAAATTAGCATAGAAA+TGG | + | chr6.3:78147009-78147028 | None:intergenic | 15.0% |
| !! | AAAAAAATTAGCATAGAAAT+GGG | + | chr6.3:78147008-78147027 | None:intergenic | 15.0% |
| !! | ACTTTATTATATGATTCATT+TGG | - | chr6.3:78144485-78144504 | MS.gene51300:intron | 15.0% |
| !! | AGGTATATATCTTTATAATT+AGG | - | chr6.3:78146945-78146964 | MS.gene51300:intron | 15.0% |
| !! | ATACAAATATATTGTTTGTT+GGG | + | chr6.3:78143893-78143912 | None:intergenic | 15.0% |
| !! | CCATCTTATTAATATATTTA+AGG | + | chr6.3:78146462-78146481 | None:intergenic | 15.0% |
| !! | CCTTAAATATATTAATAAGA+TGG | - | chr6.3:78146459-78146478 | MS.gene51300:intron | 15.0% |
| !! | CTCTATTTAAGAAAAAAAAT+TGG | + | chr6.3:78144863-78144882 | None:intergenic | 15.0% |
| !! | CTTAAAAATTCATATGAAAA+TGG | + | chr6.3:78145109-78145128 | None:intergenic | 15.0% |
| !! | GGTATATATCTTTATAATTA+GGG | - | chr6.3:78146946-78146965 | MS.gene51300:intron | 15.0% |
| !! | GTATATATCTTTATAATTAG+GGG | - | chr6.3:78146947-78146966 | MS.gene51300:intron | 15.0% |
| !! | TATACAAATATATTGTTTGT+TGG | + | chr6.3:78143894-78143913 | None:intergenic | 15.0% |
| !! | TATCATCATAATCAATATTA+TGG | - | chr6.3:78148532-78148551 | MS.gene51300:intron | 15.0% |
| !! | TTAATTAAAGCTAATATCAA+TGG | - | chr6.3:78147593-78147612 | MS.gene51300:CDS | 15.0% |
| !! | TTATATTTAGTATTTACACA+AGG | - | chr6.3:78146530-78146549 | MS.gene51300:intron | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | - | chr6.3:78145258-78145277 | MS.gene51300:CDS | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | + | chr6.3:78145277-78145258 | None:intergenic | 15.0% |
| !!! | AATTTTAAGGTTGTTTAATA+TGG | + | chr6.3:78144219-78144238 | None:intergenic | 15.0% |
| !!! | ATCTTTTTTTCATTTCAATT+TGG | + | chr6.3:78145092-78145073 | None:intergenic | 15.0% |
| !!! | TAAGTTTAAGTTCATATTTA+CGG | + | chr6.3:78147183-78147202 | None:intergenic | 15.0% |
| !!! | TAATATGATTCTCTAAAAAA+TGG | - | chr6.3:78144054-78144073 | MS.gene51300:intron | 15.0% |
| !!! | TATTTTCTTAAAAATGGTAA+AGG | + | chr6.3:78144092-78144111 | None:intergenic | 15.0% |
| !!! | TTCATGATTTTATTTTCTTA+TGG | - | chr6.3:78145136-78145155 | MS.gene51300:intron | 15.0% |
| !!! | TTTTGAGATACTTAATAAAA+TGG | + | chr6.3:78148379-78148398 | None:intergenic | 15.0% |
| !!! | TTTTTTTTCTTAAATAGAGA+AGG | - | chr6.3:78144864-78144883 | MS.gene51300:intron | 15.0% |
| !! | AATGCACAAATTTAACATAT+TGG | + | chr6.3:78148216-78148235 | None:intergenic | 20.0% |
| !! | ACCAATTAAAATGAAATTAG+AGG | + | chr6.3:78147749-78147768 | None:intergenic | 20.0% |
| !! | ATAAATTCGGTAATCAAATT+TGG | + | chr6.3:78145782-78145801 | None:intergenic | 20.0% |
| !! | ATGATTAATTGAAAATACCT+TGG | + | chr6.3:78147891-78147910 | None:intergenic | 20.0% |
| !! | ATTATATGATTCATTTGGTT+AGG | - | chr6.3:78144490-78144509 | MS.gene51300:intron | 20.0% |
| !! | ATTCAATAAATACATAGTGA+AGG | - | chr6.3:78146061-78146080 | MS.gene51300:CDS | 20.0% |
| !! | ATTTAACATATTGGTCATAT+CGG | + | chr6.3:78148207-78148226 | None:intergenic | 20.0% |
| !! | GTTACCTAAAATAAAGTTAA+GGG | + | chr6.3:78145040-78145059 | None:intergenic | 20.0% |
| !! | TATATTGTACCTTATTCATT+TGG | + | chr6.3:78147649-78147668 | None:intergenic | 20.0% |
| !! | TGATTAATTGAAAATACCTT+GGG | + | chr6.3:78147890-78147909 | None:intergenic | 20.0% |
| !! | TGTTACCTAAAATAAAGTTA+AGG | + | chr6.3:78145041-78145060 | None:intergenic | 20.0% |
| !! | TTATTCTATATGCTAGATAT+TGG | - | chr6.3:78147722-78147741 | MS.gene51300:intron | 20.0% |
| !! | TTATTTACATTTACCTAAGT+AGG | + | chr6.3:78144970-78144989 | None:intergenic | 20.0% |
| !! | TTTAAGAAAAAAAATTGGCT+CGG | + | chr6.3:78144858-78144877 | None:intergenic | 20.0% |
| !!! | AAAAGTCTTTTAGTTCTATT+AGG | - | chr6.3:78147051-78147070 | MS.gene51300:intron | 20.0% |
| !!! | AAGGTCTATTTTCTTAAAAA+TGG | + | chr6.3:78144098-78144117 | None:intergenic | 20.0% |
| !!! | ATACATATTTGAAGTTAATG+TGG | - | chr6.3:78143811-78143830 | MS.gene51300:intron | 20.0% |
| !!! | ATAGTCTTGTAAATATCAAA+AGG | - | chr6.3:78145490-78145509 | MS.gene51300:intron | 20.0% |
| !!! | ATTTATCTGAAATCAGATTT+TGG | - | chr6.3:78147445-78147464 | MS.gene51300:intron | 20.0% |
| !!! | CAAGACTCAAATAAATTTTA+AGG | + | chr6.3:78144232-78144251 | None:intergenic | 20.0% |
| !!! | CTTTATTTTAGGTAACAATT+TGG | - | chr6.3:78145044-78145063 | MS.gene51300:intron | 20.0% |
| !!! | GCTTTAATTAATTTGCATAT+TGG | + | chr6.3:78147584-78147603 | None:intergenic | 20.0% |
| !!! | TAACTCTGAAAATTTAGAAA+TGG | + | chr6.3:78147778-78147797 | None:intergenic | 20.0% |
| !!! | TAGTCTTGTAAATATCAAAA+GGG | - | chr6.3:78145491-78145510 | MS.gene51300:intron | 20.0% |
| !!! | TATGAAACATGCTTTTAAAT+AGG | - | chr6.3:78145588-78145607 | MS.gene51300:intron | 20.0% |
| !!! | TCCTCTAATTTCATTTTAAT+TGG | - | chr6.3:78147745-78147764 | MS.gene51300:intron | 20.0% |
| !!! | TGTACAAAAATATTGTTGTT+AGG | - | chr6.3:78143980-78143999 | MS.gene51300:intron | 20.0% |
| !!! | TGTAGTATTATTTTACTTTG+TGG | - | chr6.3:78147698-78147717 | MS.gene51300:intron | 20.0% |
| !!! | TTTATCTGAAATCAGATTTT+GGG | - | chr6.3:78147446-78147465 | MS.gene51300:intron | 20.0% |
| ! | AAAACTACAACAACAAAAGT+GGG | + | chr6.3:78146487-78146506 | None:intergenic | 25.0% |
| ! | AATTGGAGATTTCATATTGA+CGG | + | chr6.3:78144310-78144329 | None:intergenic | 25.0% |
| ! | ACATTAATCTATTAGTTCGT+TGG | - | chr6.3:78145523-78145542 | MS.gene51300:intron | 25.0% |
| ! | AGTTATATAGACAAATTGGT+TGG | - | chr6.3:78147793-78147812 | MS.gene51300:intron | 25.0% |
| ! | ATCAAATATTTACAGTCATG+TGG | + | chr6.3:78144009-78144028 | None:intergenic | 25.0% |
| ! | CTGAAAATTTAGAAATGGTA+TGG | + | chr6.3:78147773-78147792 | None:intergenic | 25.0% |
| ! | CTTGAAAATGTATATGAGAA+TGG | - | chr6.3:78145220-78145239 | MS.gene51300:intron | 25.0% |
| ! | GTCATCTCTTAATTCTTATT+AGG | + | chr6.3:78143871-78143890 | None:intergenic | 25.0% |
| ! | GTTACCTGAAATTAAGTTAA+GGG | - | chr6.3:78145289-78145308 | MS.gene51300:CDS | 25.0% |
| ! | TACTTATTTCCAACTAACTT+CGG | - | chr6.3:78146413-78146432 | MS.gene51300:intron | 25.0% |
| ! | TAGCATGACATATTATTGAT+TGG | - | chr6.3:78146365-78146384 | MS.gene51300:intron | 25.0% |
| ! | TCAGAGTTATATAGACAAAT+TGG | - | chr6.3:78147789-78147808 | MS.gene51300:intron | 25.0% |
| ! | TCATATGAAAATGGATCAAA+AGG | + | chr6.3:78145100-78145119 | None:intergenic | 25.0% |
| ! | TGTTACCTGAAATTAAGTTA+AGG | - | chr6.3:78145288-78145307 | MS.gene51300:CDS | 25.0% |
| ! | TTAGTATTTACACAAGGAAA+TGG | - | chr6.3:78146536-78146555 | MS.gene51300:intron | 25.0% |
| ! | TTGTAACTCTAACTATCTAA+GGG | + | chr6.3:78144701-78144720 | None:intergenic | 25.0% |
| ! | TTTGTAACTCTAACTATCTA+AGG | + | chr6.3:78144702-78144721 | None:intergenic | 25.0% |
| !! | AATATAGCTTGTGAAAATTG+AGG | - | chr6.3:78143941-78143960 | MS.gene51300:intron | 25.0% |
| !! | ACTTCAAATATGTATGCTTT+TGG | + | chr6.3:78143806-78143825 | None:intergenic | 25.0% |
| !! | ATATAGCTTGTGAAAATTGA+GGG | - | chr6.3:78143942-78143961 | MS.gene51300:intron | 25.0% |
| !! | CTAGCAATATTTTCTATAGA+TGG | + | chr6.3:78148562-78148581 | None:intergenic | 25.0% |
| !!! | ATGTCATAGGCTTATTTTTT+AGG | + | chr6.3:78145654-78145673 | None:intergenic | 25.0% |
| !!! | TAGTCCCTTAACTTTATTTT+AGG | - | chr6.3:78145033-78145052 | MS.gene51300:intron | 25.0% |
| AAAAACCTCTTAATCCTATC+AGG | - | chr6.3:78144940-78144959 | MS.gene51300:intron | 30.0% | |
| AAACAAATTCATGTCAAGAG+TGG | - | chr6.3:78148278-78148297 | MS.gene51300:intron | 30.0% | |
| AAACTACAACAACAAAAGTG+GGG | + | chr6.3:78146486-78146505 | None:intergenic | 30.0% | |
| AAAGGAAATCCATTTGCATT+TGG | + | chr6.3:78148655-78148674 | None:intergenic | 30.0% | |
| AAGGTTGTTTAATATGGATC+CGG | + | chr6.3:78144213-78144232 | None:intergenic | 30.0% | |
| AATTATAGGTGATCAAACTG+TGG | - | chr6.3:78148468-78148487 | MS.gene51300:CDS | 30.0% | |
| AGTTTCATACCTGTGAAAAT+TGG | + | chr6.3:78144650-78144669 | None:intergenic | 30.0% | |
| ATAAGATCATATACTCGTAC+TGG | - | chr6.3:78147995-78148014 | MS.gene51300:intron | 30.0% | |
| ATACACAAAATGGAATGAGT+TGG | - | chr6.3:78147822-78147841 | MS.gene51300:intron | 30.0% | |
| ATCTCTAATTTAGTCGCTAT+GGG | - | chr6.3:78144780-78144799 | MS.gene51300:intron | 30.0% | |
| ATGCTAATAGCACATGTTAA+AGG | + | chr6.3:78147355-78147374 | None:intergenic | 30.0% | |
| ATGTATAGTAGTTTCTTGCA+TGG | + | chr6.3:78143566-78143585 | None:intergenic | 30.0% | |
| CAAAACTACAACAACAAAAG+TGG | + | chr6.3:78146488-78146507 | None:intergenic | 30.0% | |
| CCTATTTAACTAAAAAGGCA+AGG | - | chr6.3:78144903-78144922 | MS.gene51300:intron | 30.0% | |
| CGAAGCCTATTTAACTAAAA+AGG | - | chr6.3:78144898-78144917 | MS.gene51300:intron | 30.0% | |
| GTACTTGAACCAAATGAATA+AGG | - | chr6.3:78147637-78147656 | MS.gene51300:CDS | 30.0% | |
| GTATATGAGAATGGACAAAA+AGG | - | chr6.3:78145229-78145248 | MS.gene51300:CDS | 30.0% | |
| GTTTCATACCTGTGAAAATT+GGG | + | chr6.3:78144649-78144668 | None:intergenic | 30.0% | |
| TAAACTATGATTCCTTTGAG+AGG | + | chr6.3:78146649-78146668 | None:intergenic | 30.0% | |
| TACAACTCTCATTCAACAAA+AGG | - | chr6.3:78144615-78144634 | MS.gene51300:CDS | 30.0% | |
| TAGTCCCTTAACTTAATTTC+AGG | + | chr6.3:78145296-78145315 | None:intergenic | 30.0% | |
| TCAACAAGACTTATGCTTAT+AGG | + | chr6.3:78145924-78145943 | None:intergenic | 30.0% | |
| TGCACATGTTGAATTAGATT+TGG | + | chr6.3:78148256-78148275 | None:intergenic | 30.0% | |
| TTAAAAAGACCGAAGTTAGT+TGG | + | chr6.3:78146425-78146444 | None:intergenic | 30.0% | |
| TTAATGCAAGCTTCATAGTT+AGG | + | chr6.3:78144379-78144398 | None:intergenic | 30.0% | |
| TTACATTTACCTAAGTAGGT+TGG | + | chr6.3:78144966-78144985 | None:intergenic | 30.0% | |
| TTCAATTCTCCAGAAAGTAA+TGG | + | chr6.3:78146104-78146123 | None:intergenic | 30.0% | |
| TTCAGAAGAATGGTAAATTG+AGG | + | chr6.3:78147560-78147579 | None:intergenic | 30.0% | |
| TTCTTATGCAAACATAGACA+AGG | + | chr6.3:78145186-78145205 | None:intergenic | 30.0% | |
| TTTGTTGAATGAGAGTTGTA+AGG | + | chr6.3:78144615-78144634 | None:intergenic | 30.0% | |
| ! | AACGACGAAGAGTATAAATT+CGG | + | chr6.3:78145795-78145814 | None:intergenic | 30.0% |
| ! | AGAATCATCAAAAACCCTTT+TGG | + | chr6.3:78143416-78143435 | None:intergenic | 30.0% |
| ! | CTTAATTTCAGGTAACAGTT+TGG | + | chr6.3:78145285-78145304 | None:intergenic | 30.0% |
| ! | CTTTTCTATCTCTAAACTTC+CGG | + | chr6.3:78144751-78144770 | None:intergenic | 30.0% |
| ! | TAAACATTTTTGCCTCTCAA+AGG | - | chr6.3:78146634-78146653 | MS.gene51300:intron | 30.0% |
| ! | TAAGCCTTAAATCTTTTGAC+AGG | - | chr6.3:78145689-78145708 | MS.gene51300:intron | 30.0% |
| !! | AATGCAAATGGATTTCCTTT+TGG | - | chr6.3:78148655-78148674 | MS.gene51300:intron | 30.0% |
| !! | ACAACAATCTCTAGCTTTAT+AGG | + | chr6.3:78145990-78146009 | None:intergenic | 30.0% |
| !! | CAACAATCTCTAGCTTTATA+GGG | + | chr6.3:78145989-78146008 | None:intergenic | 30.0% |
| !! | CTTACCACTCTTTTAAGAAA+AGG | + | chr6.3:78143713-78143732 | None:intergenic | 30.0% |
| !! | GATGACTTAGTTTTTGAACT+CGG | - | chr6.3:78148111-78148130 | MS.gene51300:intron | 30.0% |
| !!! | CCTTGCCTTTTTAGTTAAAT+AGG | + | chr6.3:78144906-78144925 | None:intergenic | 30.0% |
| !!! | CTTGTTGTGACACTTTTTTT+AGG | + | chr6.3:78146564-78146583 | None:intergenic | 30.0% |
| AACTCTAACTATCTAAGGGT+TGG | + | chr6.3:78144697-78144716 | None:intergenic | 35.0% | |
| AAGATGGTCCAATGTTAAAC+CGG | - | chr6.3:78144191-78144210 | MS.gene51300:intron | 35.0% | |
| AATCCATGTATTCACGTAGT+TGG | - | chr6.3:78148060-78148079 | MS.gene51300:intron | 35.0% | |
| ACATAGTGAAGGAAAGAACT+GGG | - | chr6.3:78146072-78146091 | MS.gene51300:CDS | 35.0% | |
| AGTTCACAGATAATTCTAGC+TGG | - | chr6.3:78146165-78146184 | MS.gene51300:CDS | 35.0% | |
| ATATGGATCCGGTTTAACAT+TGG | + | chr6.3:78144202-78144221 | None:intergenic | 35.0% | |
| ATTAAGAATCCAAGCACCAA+GGG | - | chr6.3:78144577-78144596 | MS.gene51300:CDS | 35.0% | |
| ATTCTACTACCTGTGAAAGT+TGG | + | chr6.3:78145882-78145901 | None:intergenic | 35.0% | |
| CACATGATGAAAACGAGAAT+TGG | - | chr6.3:78146027-78146046 | MS.gene51300:CDS | 35.0% | |
| CAGTTAATGTGCAAAACATG+CGG | - | chr6.3:78143666-78143685 | MS.gene51300:CDS | 35.0% | |
| CATAGCGACTAAATTAGAGA+TGG | + | chr6.3:78144781-78144800 | None:intergenic | 35.0% | |
| CATCTCTAATTTAGTCGCTA+TGG | - | chr6.3:78144779-78144798 | MS.gene51300:intron | 35.0% | |
| CGGAAGTTTAGAGATAGAAA+AGG | - | chr6.3:78144749-78144768 | MS.gene51300:intron | 35.0% | |
| CTAGAGATTGTTGTACTTGA+TGG | - | chr6.3:78145996-78146015 | MS.gene51300:CDS | 35.0% | |
| CTGTCCTGTCAAAAGATTTA+AGG | + | chr6.3:78145696-78145715 | None:intergenic | 35.0% | |
| GAATTGAACCTTACTATGAG+AGG | - | chr6.3:78146116-78146135 | MS.gene51300:CDS | 35.0% | |
| GATAAAGTGCAGGAAGTTTA+GGG | - | chr6.3:78146187-78146206 | MS.gene51300:CDS | 35.0% | |
| GATTTCATTCGTTTGTCGTT+TGG | + | chr6.3:78143460-78143479 | None:intergenic | 35.0% | |
| GCATATTGGATTCAGAAGAA+TGG | + | chr6.3:78147570-78147589 | None:intergenic | 35.0% | |
| GCCAAGCAATAATGTACAAA+TGG | - | chr6.3:78148588-78148607 | MS.gene51300:intron | 35.0% | |
| GCCATTTGTACATTATTGCT+TGG | + | chr6.3:78148592-78148611 | None:intergenic | 35.0% | |
| GTTGAAACTTGAAATAGTGC+CGG | - | chr6.3:78144729-78144748 | MS.gene51300:intron | 35.0% | |
| TAATGAAGGTGACCTATTGA+TGG | + | chr6.3:78144561-78144580 | None:intergenic | 35.0% | |
| TACATAGTGAAGGAAAGAAC+TGG | - | chr6.3:78146071-78146090 | MS.gene51300:CDS | 35.0% | |
| TGATACTCAAAAGCTAAGAG+AGG | - | chr6.3:78146925-78146944 | MS.gene51300:intron | 35.0% | |
| TTGAATGAGAGTTGTAAGGT+TGG | + | chr6.3:78144611-78144630 | None:intergenic | 35.0% | |
| TTGTGGTATGAATAGCTATG+CGG | + | chr6.3:78144343-78144362 | None:intergenic | 35.0% | |
| ! | AACATTGCTTTGTTAACCCA+AGG | - | chr6.3:78147871-78147890 | MS.gene51300:intron | 35.0% |
| ! | AACTTGTTTCTCATGGGTTA+GGG | - | chr6.3:78143836-78143855 | MS.gene51300:intron | 35.0% |
| ! | AATGAGTTGGAGGAAATTGA+TGG | - | chr6.3:78147835-78147854 | MS.gene51300:intron | 35.0% |
| ! | ATGCGAGTAATCAAAGTGTT+AGG | - | chr6.3:78146228-78146247 | MS.gene51300:CDS | 35.0% |
| ! | ATGCTTTTAAATAGGCTAGC+AGG | - | chr6.3:78145596-78145615 | MS.gene51300:intron | 35.0% |
| ! | CAAAACATGCGGAACTTTTT+AGG | - | chr6.3:78143677-78143696 | MS.gene51300:intron | 35.0% |
| ! | CAAAGTGTTAGGATTCAAGA+AGG | - | chr6.3:78146239-78146258 | MS.gene51300:CDS | 35.0% |
| ! | CAATTCTCGTTTTCATCATG+TGG | + | chr6.3:78146029-78146048 | None:intergenic | 35.0% |
| ! | CATATTGGTCATATCGGTTA+AGG | + | chr6.3:78148201-78148220 | None:intergenic | 35.0% |
| ! | GGAACCTTTTCTTAAAAGAG+TGG | - | chr6.3:78143706-78143725 | MS.gene51300:intron | 35.0% |
| ! | TGAAATCAGATTTTGGGCAT+GGG | - | chr6.3:78147452-78147471 | MS.gene51300:intron | 35.0% |
| ! | TTGGAGAAGCATACACAAAA+TGG | - | chr6.3:78147812-78147831 | MS.gene51300:intron | 35.0% |
| !! | AGATTTGGATTTGTTGCAGT+CGG | + | chr6.3:78148241-78148260 | None:intergenic | 35.0% |
| !! | ATCTCTAGCTTTATAGGGTA+AGG | + | chr6.3:78145984-78146003 | None:intergenic | 35.0% |
| !! | GAAGACTTGTTGGAACAATT+TGG | + | chr6.3:78145962-78145981 | None:intergenic | 35.0% |
| !! | GTGGTTAACTTGTTTCTCAT+GGG | - | chr6.3:78143830-78143849 | MS.gene51300:intron | 35.0% |
| !! | TAACTTGTTTCTCATGGGTT+AGG | - | chr6.3:78143835-78143854 | MS.gene51300:intron | 35.0% |
| !! | TGTGGTTAACTTGTTTCTCA+TGG | - | chr6.3:78143829-78143848 | MS.gene51300:intron | 35.0% |
| !! | TTTGTTGTTAAGGATCATCG+TGG | - | chr6.3:78146275-78146294 | MS.gene51300:intron | 35.0% |
| !!! | TAGGTGAAGTTGGTTTTTTG+TGG | + | chr6.3:78144360-78144379 | None:intergenic | 35.0% |
| AACTTCGTTCCAACTTTCAC+AGG | - | chr6.3:78145870-78145889 | MS.gene51300:CDS | 40.0% | |
| ACCACAAAATGATGGCTAAG+GGG | - | chr6.3:78146864-78146883 | MS.gene51300:intron | 40.0% | |
| ACCACAACACCAAATGCAAA+TGG | - | chr6.3:78148643-78148662 | MS.gene51300:intron | 40.0% | |
| ACTGTTGCTGGATGATTGTT+TGG | + | chr6.3:78148502-78148521 | None:intergenic | 40.0% | |
| AGCTTTCCACCACAAAATGA+TGG | - | chr6.3:78146856-78146875 | MS.gene51300:intron | 40.0% | |
| AGTGCATACGAAGCAAAAGA+AGG | + | chr6.3:78143490-78143509 | None:intergenic | 40.0% | |
| ATAGGGTAAGGAAGACTTGT+TGG | + | chr6.3:78145972-78145991 | None:intergenic | 40.0% | |
| ATGCCAACTACGTGAATACA+TGG | + | chr6.3:78148066-78148085 | None:intergenic | 40.0% | |
| ATTTGGTTAGGTGAGTGAAG+AGG | - | chr6.3:78144502-78144521 | MS.gene51300:intron | 40.0% | |
| CAATTCCACCTCTCATAGTA+AGG | + | chr6.3:78146127-78146146 | None:intergenic | 40.0% | |
| CACCACAAAATGATGGCTAA+GGG | - | chr6.3:78146863-78146882 | MS.gene51300:intron | 40.0% | |
| CATACCTGTGAAAATTGGGA+GGG | + | chr6.3:78144645-78144664 | None:intergenic | 40.0% | |
| CATCAGACTTTCAAGAGATC+AGG | - | chr6.3:78145622-78145641 | MS.gene51300:intron | 40.0% | |
| CATCTTTCCCTATCTTCTCT+AGG | + | chr6.3:78146835-78146854 | None:intergenic | 40.0% | |
| CATTAAGAATCCAAGCACCA+AGG | - | chr6.3:78144576-78144595 | MS.gene51300:CDS | 40.0% | |
| CCAATACAACATGTCTTGTG+TGG | + | chr6.3:78148035-78148054 | None:intergenic | 40.0% | |
| CCACACAAGACATGTTGTAT+TGG | - | chr6.3:78148032-78148051 | MS.gene51300:intron | 40.0% | |
| CTAGAGAAGATAGGGAAAGA+TGG | - | chr6.3:78146833-78146852 | MS.gene51300:intron | 40.0% | |
| GAATGGTAAATTGAGGTCCA+CGG | + | chr6.3:78147553-78147572 | None:intergenic | 40.0% | |
| GCTTCATAGTTAGGTGAAGT+TGG | + | chr6.3:78144370-78144389 | None:intergenic | 40.0% | |
| GGATAAAGTGCAGGAAGTTT+AGG | - | chr6.3:78146186-78146205 | MS.gene51300:CDS | 40.0% | |
| GGTGCTTGGATTCTTAATGA+AGG | + | chr6.3:78144575-78144594 | None:intergenic | 40.0% | |
| TATGTCTCTATAGACCGATC+TGG | + | chr6.3:78144812-78144831 | None:intergenic | 40.0% | |
| TATGTTGTTGCTACTGTTGC+TGG | + | chr6.3:78148514-78148533 | None:intergenic | 40.0% | |
| TCATACCTGTGAAAATTGGG+AGG | + | chr6.3:78144646-78144665 | None:intergenic | 40.0% | |
| TGAACCCATTAATGTCCCTA+GGG | + | chr6.3:78148729-78148748 | None:intergenic | 40.0% | |
| TGCATCTGTGTCAAATGTCA+TGG | + | chr6.3:78143751-78143770 | None:intergenic | 40.0% | |
| TGTGAGTCTTGAGTAGTAGA+TGG | + | chr6.3:78147676-78147695 | None:intergenic | 40.0% | |
| TTGAACCTTACTATGAGAGG+TGG | - | chr6.3:78146119-78146138 | MS.gene51300:CDS | 40.0% | |
| TTGGAACGAAGTTAACTCAG+TGG | + | chr6.3:78145863-78145882 | None:intergenic | 40.0% | |
| ! | ATGCAATGACTTGTGACATG+GGG | - | chr6.3:78147510-78147529 | MS.gene51300:CDS | 40.0% |
| ! | ATTCTAGCTGGATAAAGTGC+AGG | - | chr6.3:78146177-78146196 | MS.gene51300:CDS | 40.0% |
| ! | CACAAAATGGAATGAGTTGG+AGG | - | chr6.3:78147825-78147844 | MS.gene51300:intron | 40.0% |
| ! | CATGCAATGACTTGTGACAT+GGG | - | chr6.3:78147509-78147528 | MS.gene51300:CDS | 40.0% |
| ! | CTGAAATCAGATTTTGGGCA+TGG | - | chr6.3:78147451-78147470 | MS.gene51300:intron | 40.0% |
| ! | GAAATCAGATTTTGGGCATG+GGG | - | chr6.3:78147453-78147472 | MS.gene51300:intron | 40.0% |
| ! | GAAGTTTAGGGTTGCAGTTA+AGG | - | chr6.3:78146199-78146218 | MS.gene51300:CDS | 40.0% |
| ! | GATCATATACTCGTACTGGT+TGG | - | chr6.3:78147999-78148018 | MS.gene51300:intron | 40.0% |
| ! | TAAGGCTTAAGCATTGTCAG+CGG | + | chr6.3:78145678-78145697 | None:intergenic | 40.0% |
| ! | TCTTTTGACAGGACAGACTT+AGG | - | chr6.3:78145700-78145719 | MS.gene51300:intron | 40.0% |
| ! | TTAGCATAGAAATGGGCTCT+AGG | + | chr6.3:78147001-78147020 | None:intergenic | 40.0% |
| !! | GACTGAGGCATTTGTTGTTA+AGG | - | chr6.3:78146265-78146284 | MS.gene51300:intron | 40.0% |
| !! | TCCATTTGCATTTGGTGTTG+TGG | + | chr6.3:78148647-78148666 | None:intergenic | 40.0% |
| !! | TGCATTTGGTGTTGTGGTAT+AGG | + | chr6.3:78148641-78148660 | None:intergenic | 40.0% |
| !!! | GATTTCCTTTTGGCTTCACA+GGG | - | chr6.3:78148665-78148684 | MS.gene51300:intron | 40.0% |
| AAACACCATCCACCAATGCT+TGG | - | chr6.3:78146794-78146813 | MS.gene51300:intron | 45.0% | |
| AACTCTACGATTAGCAAGGG+TGG | + | chr6.3:78145758-78145777 | None:intergenic | 45.0% | |
| ACATGGGGAGCAAGATCTAT+AGG | - | chr6.3:78147525-78147544 | MS.gene51300:CDS | 45.0% | |
| ACTCTACGATTAGCAAGGGT+GGG | + | chr6.3:78145757-78145776 | None:intergenic | 45.0% | |
| AGAGGTGGAATTGCACCAAT+TGG | - | chr6.3:78146134-78146153 | MS.gene51300:CDS | 45.0% | |
| AGCAAGGGTGGGAATAGATT+AGG | + | chr6.3:78145746-78145765 | None:intergenic | 45.0% | |
| AGGTCGAGTTAGACTTTGCA+AGG | + | chr6.3:78145726-78145745 | None:intergenic | 45.0% | |
| AGGTGGAATTGCACCAATTG+GGG | - | chr6.3:78146136-78146155 | MS.gene51300:CDS | 45.0% | |
| AGTAGAATACTCGACGCTGA+AGG | - | chr6.3:78145894-78145913 | MS.gene51300:CDS | 45.0% | |
| CCACCACAAAATGATGGCTA+AGG | - | chr6.3:78146862-78146881 | MS.gene51300:intron | 45.0% | |
| CTGTCCCTAGGGACATTAAT+GGG | - | chr6.3:78148722-78148741 | MS.gene51300:CDS | 45.0% | |
| GAAGAGGTGGATAGAGCAAT+TGG | - | chr6.3:78144518-78144537 | MS.gene51300:CDS | 45.0% | |
| GAAGGTGACCTATTGATGGA+AGG | + | chr6.3:78144557-78144576 | None:intergenic | 45.0% | |
| GAGGTGGAATTGCACCAATT+GGG | - | chr6.3:78146135-78146154 | MS.gene51300:CDS | 45.0% | |
| GCTATGGGAATAAGCCAGAT+CGG | - | chr6.3:78144795-78144814 | MS.gene51300:intron | 45.0% | |
| GCTTTCCACCTTCCATCAAT+AGG | - | chr6.3:78144546-78144565 | MS.gene51300:CDS | 45.0% | |
| GGCAACTCTACGATTAGCAA+GGG | + | chr6.3:78145761-78145780 | None:intergenic | 45.0% | |
| GGGAAGAGACCATTACTTTC+TGG | - | chr6.3:78146092-78146111 | MS.gene51300:CDS | 45.0% | |
| GTGAACCCATTAATGTCCCT+AGG | + | chr6.3:78148730-78148749 | None:intergenic | 45.0% | |
| GTGAACTCTATGTCCCCAAT+TGG | + | chr6.3:78146152-78146171 | None:intergenic | 45.0% | |
| TACAAATGGCTAGCAGTGAG+TGG | - | chr6.3:78148602-78148621 | MS.gene51300:intron | 45.0% | |
| TATGCGGAGACTACTGCAAT+TGG | + | chr6.3:78144327-78144346 | None:intergenic | 45.0% | |
| TCACAGGGTCACAATCAGAT+GGG | - | chr6.3:78148680-78148699 | MS.gene51300:CDS | 45.0% | |
| TCTGTCCCTAGGGACATTAA+TGG | - | chr6.3:78148721-78148740 | MS.gene51300:CDS | 45.0% | |
| TGGCAACTCTACGATTAGCA+AGG | + | chr6.3:78145762-78145781 | None:intergenic | 45.0% | |
| TGGGGATGTCTGATAGAATG+TGG | - | chr6.3:78147471-78147490 | MS.gene51300:intron | 45.0% | |
| TTCACAGGGTCACAATCAGA+TGG | - | chr6.3:78148679-78148698 | MS.gene51300:CDS | 45.0% | |
| ! | AAGGTTGGTTGTTGATCCCT+TGG | + | chr6.3:78144596-78144615 | None:intergenic | 45.0% |
| ! | ACCTTCAAGTTCTGTCCCTA+GGG | - | chr6.3:78148711-78148730 | MS.gene51300:CDS | 45.0% |
| ! | AGCAAGATCTATAGGTACCG+TGG | - | chr6.3:78147533-78147552 | MS.gene51300:CDS | 45.0% |
| ! | CCTTAGCCATCATTTTGTGG+TGG | + | chr6.3:78146865-78146884 | None:intergenic | 45.0% |
| ! | CTTTCCCTCCCAATTTTCAC+AGG | - | chr6.3:78144638-78144657 | MS.gene51300:CDS | 45.0% |
| ! | GATTCAAGAAGGCATGACTG+AGG | - | chr6.3:78146250-78146269 | MS.gene51300:CDS | 45.0% |
| ! | GCATGCAATGACTTGTGACA+TGG | - | chr6.3:78147508-78147527 | MS.gene51300:intron | 45.0% |
| ! | GTTGGCCTGATAGGATTAAG+AGG | + | chr6.3:78144948-78144967 | None:intergenic | 45.0% |
| ! | TCCCCTTAGCCATCATTTTG+TGG | + | chr6.3:78146868-78146887 | None:intergenic | 45.0% |
| !! | GAAATGGGCTCTAGGAAATG+TGG | + | chr6.3:78146993-78147012 | None:intergenic | 45.0% |
| !! | GCGGAACTTTTTAGGAGCTT+TGG | - | chr6.3:78143685-78143704 | MS.gene51300:intron | 45.0% |
| !! | GGGACATTAATGGGTTCACA+AGG | - | chr6.3:78148731-78148750 | MS.gene51300:CDS | 45.0% |
| !! | GTTTCTCATGGGTTAGGGTT+GGG | - | chr6.3:78143841-78143860 | MS.gene51300:intron | 45.0% |
| !! | TGTTTCTCATGGGTTAGGGT+TGG | - | chr6.3:78143840-78143859 | MS.gene51300:intron | 45.0% |
| !! | TTTCTCATGGGTTAGGGTTG+GGG | - | chr6.3:78143842-78143861 | MS.gene51300:intron | 45.0% |
| !!! | GGATTTCCTTTTGGCTTCAC+AGG | - | chr6.3:78148664-78148683 | MS.gene51300:intron | 45.0% |
| !!! | ATATTTTATTAAAAATAAGA+TGG | - | chr6.3:78144175-78144194 | MS.gene51300:intron | 5.0% |
| !!! | ATTCATTTTTTTATTAAAAA+TGG | + | chr6.3:78144123-78144142 | None:intergenic | 5.0% |
| CAATGCTTGGCGATGATGTG+TGG | - | chr6.3:78146807-78146826 | MS.gene51300:intron | 50.0% | |
| CACACATCATCGCCAAGCAT+TGG | + | chr6.3:78146809-78146828 | None:intergenic | 50.0% | |
| CACAGGGTCACAATCAGATG+GGG | - | chr6.3:78148681-78148700 | MS.gene51300:CDS | 50.0% | |
| CATTGTCAGCGGCATGTCAT+AGG | + | chr6.3:78145667-78145686 | None:intergenic | 50.0% | |
| CCTATCAGGCCAACCTACTT+AGG | - | chr6.3:78144954-78144973 | MS.gene51300:intron | 50.0% | |
| GGTGACCTATTGATGGAAGG+TGG | + | chr6.3:78144554-78144573 | None:intergenic | 50.0% | |
| TCCCTAGGGACAGAACTTGA+AGG | + | chr6.3:78148715-78148734 | None:intergenic | 50.0% | |
| TGGTTAGGTGAGTGAAGAGG+TGG | - | chr6.3:78144505-78144524 | MS.gene51300:intron | 50.0% | |
| TGTGACCCTGTGAAGCCAAA+AGG | + | chr6.3:78148673-78148692 | None:intergenic | 50.0% | |
| TGTGGCGCCTAGAGAAGATA+GGG | - | chr6.3:78146825-78146844 | MS.gene51300:intron | 50.0% | |
| ! | CACCTTCAAGTTCTGTCCCT+AGG | - | chr6.3:78148710-78148729 | MS.gene51300:CDS | 50.0% |
| !! | ACATCATCGCCAAGCATTGG+TGG | + | chr6.3:78146806-78146825 | None:intergenic | 50.0% |
| !! | CCTAAGTAGGTTGGCCTGAT+AGG | + | chr6.3:78144957-78144976 | None:intergenic | 50.0% |
| !! | GTTGTTGATCCCTTGGTGCT+TGG | + | chr6.3:78144589-78144608 | None:intergenic | 50.0% |
| GTGTGGCGCCTAGAGAAGAT+AGG | - | chr6.3:78146824-78146843 | MS.gene51300:intron | 55.0% | |
| !! | CATCGCCAAGCATTGGTGGA+TGG | + | chr6.3:78146802-78146821 | None:intergenic | 55.0% |
| !! | TGGCTCGGTCTGTCTGTCAT+AGG | + | chr6.3:78144843-78144862 | None:intergenic | 55.0% |
| !! | CTCATGGGTTAGGGTTGGGG+TGG | - | chr6.3:78143845-78143864 | MS.gene51300:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 78143406 | 78148762 | 78143406 | ID=MS.gene51300 |
| chr6.3 | mRNA | 78143406 | 78148762 | 78143406 | ID=MS.gene51300.t1;Parent=MS.gene51300 |
| chr6.3 | exon | 78148668 | 78148762 | 78148668 | ID=MS.gene51300.t1.exon1;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78148668 | 78148762 | 78148668 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78148441 | 78148516 | 78148441 | ID=MS.gene51300.t1.exon2;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78148441 | 78148516 | 78148441 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78147509 | 78147656 | 78147509 | ID=MS.gene51300.t1.exon3;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78147509 | 78147656 | 78147509 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78145866 | 78146276 | 78145866 | ID=MS.gene51300.t1.exon4;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78145866 | 78146276 | 78145866 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78145222 | 78145382 | 78145222 | ID=MS.gene51300.t1.exon5;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78145222 | 78145382 | 78145222 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78144510 | 78144707 | 78144510 | ID=MS.gene51300.t1.exon6;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78144510 | 78144707 | 78144510 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78144276 | 78144375 | 78144276 | ID=MS.gene51300.t1.exon7;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78144276 | 78144375 | 78144276 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| chr6.3 | exon | 78143406 | 78143692 | 78143406 | ID=MS.gene51300.t1.exon8;Parent=MS.gene51300.t1 |
| chr6.3 | CDS | 78143406 | 78143692 | 78143406 | ID=cds.MS.gene51300.t1;Parent=MS.gene51300.t1 |
| Gene Sequence |
| Protein sequence |
