Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53280.t1 | XP_003598051.1 | 97 | 271 | 8 | 0 | 3 | 273 | 28 | 298 | 6.80E-149 | 536.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53280.t1 | Q9T0F7 | 70.3 | 239 | 67 | 3 | 36 | 273 | 48 | 283 | 3.6e-98 | 359.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53280.t1 | G7J059 | 97.0 | 271 | 8 | 0 | 3 | 273 | 28 | 298 | 4.9e-149 | 536.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049227 | MS.gene53280 | 0.871384 | 7.12E-67 | -1.69E-46 |
MS.gene049887 | MS.gene53280 | 0.812233 | 4.70E-51 | -1.69E-46 |
MS.gene052732 | MS.gene53280 | 0.808857 | 2.52E-50 | -1.69E-46 |
MS.gene053144 | MS.gene53280 | 0.877598 | 5.53E-69 | -1.69E-46 |
MS.gene053581 | MS.gene53280 | 0.808714 | 2.70E-50 | -1.69E-46 |
MS.gene054584 | MS.gene53280 | 0.864327 | 1.32E-64 | -1.69E-46 |
MS.gene055423 | MS.gene53280 | 0.814599 | 1.42E-51 | -1.69E-46 |
MS.gene058206 | MS.gene53280 | 0.813104 | 3.03E-51 | -1.69E-46 |
MS.gene058722 | MS.gene53280 | 0.81961 | 1.06E-52 | -1.69E-46 |
MS.gene058945 | MS.gene53280 | 0.808857 | 2.52E-50 | -1.69E-46 |
MS.gene060317 | MS.gene53280 | 0.801061 | 1.08E-48 | -1.69E-46 |
MS.gene060884 | MS.gene53280 | 0.80424 | 2.38E-49 | -1.69E-46 |
MS.gene060886 | MS.gene53280 | 0.802843 | 4.63E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53280.t1 | MTR_3g005710 | 98.901 | 273 | 3 | 0 | 1 | 273 | 26 | 298 | 0.0 | 571 |
MS.gene53280.t1 | MTR_8g080660 | 45.000 | 240 | 118 | 5 | 47 | 272 | 58 | 297 | 1.28e-68 | 214 |
MS.gene53280.t1 | MTR_3g085270 | 46.977 | 215 | 109 | 4 | 51 | 260 | 60 | 274 | 1.62e-66 | 209 |
MS.gene53280.t1 | MTR_4g485570 | 42.791 | 215 | 119 | 2 | 52 | 262 | 68 | 282 | 2.47e-58 | 188 |
MS.gene53280.t1 | MTR_4g485560 | 42.925 | 212 | 117 | 2 | 55 | 262 | 21 | 232 | 3.54e-56 | 181 |
MS.gene53280.t1 | MTR_7g029100 | 45.588 | 204 | 94 | 3 | 59 | 261 | 79 | 266 | 1.87e-55 | 180 |
MS.gene53280.t1 | MTR_4g094895 | 38.839 | 224 | 131 | 4 | 41 | 258 | 60 | 283 | 8.84e-51 | 169 |
MS.gene53280.t1 | MTR_4g102900 | 36.797 | 231 | 136 | 6 | 49 | 273 | 71 | 297 | 5.57e-42 | 146 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene53280.t1 | AT4G09990 | 70.293 | 239 | 67 | 3 | 36 | 273 | 48 | 283 | 2.96e-128 | 366 |
MS.gene53280.t1 | AT1G33800 | 67.886 | 246 | 77 | 2 | 28 | 273 | 47 | 290 | 6.04e-128 | 365 |
MS.gene53280.t1 | AT1G09610 | 65.079 | 252 | 80 | 4 | 27 | 273 | 34 | 282 | 4.18e-122 | 350 |
MS.gene53280.t1 | AT1G71690 | 58.889 | 270 | 93 | 6 | 9 | 273 | 39 | 295 | 1.92e-111 | 323 |
MS.gene53280.t1 | AT1G67330 | 50.935 | 214 | 101 | 3 | 53 | 262 | 65 | 278 | 6.92e-74 | 228 |
MS.gene53280.t1 | AT1G27930 | 49.528 | 212 | 104 | 2 | 53 | 261 | 62 | 273 | 8.42e-72 | 222 |
MS.gene53280.t1 | AT5G67210 | 37.838 | 259 | 153 | 5 | 6 | 258 | 34 | 290 | 6.47e-53 | 175 |
MS.gene53280.t1 | AT2G15440 | 37.054 | 224 | 131 | 5 | 58 | 272 | 81 | 303 | 1.05e-50 | 169 |
MS.gene53280.t1 | AT3G50220 | 40.376 | 213 | 121 | 4 | 52 | 258 | 85 | 297 | 8.34e-50 | 167 |
MS.gene53280.t1 | AT4G24910 | 34.536 | 194 | 120 | 4 | 74 | 260 | 104 | 297 | 2.23e-29 | 113 |
Find 67 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGCAACTTCTTGGTCTT+TGG | 0.164120 | 3.2:-619520 | MS.gene53280:CDS |
AAAATCACCTTGCAACTTCT+TGG | 0.221414 | 3.2:-619527 | MS.gene53280:CDS |
AAATGTGGATTAGCACTTAA+AGG | 0.223364 | 3.2:-619277 | MS.gene53280:CDS |
AGTGATGAACTAATGAAAAT+TGG | 0.261741 | 3.2:-619346 | MS.gene53280:CDS |
AAATCAATTTCATGGACAAT+AGG | 0.306327 | 3.2:+618973 | None:intergenic |
ATTGCTAGGAATAGAGAAAA+TGG | 0.307486 | 3.2:-619142 | MS.gene53280:CDS |
TTTGTGCATGTTGGTGTTAT+AGG | 0.311759 | 3.2:+619655 | None:intergenic |
CCAACGTTGGGAACTTTGAT+TGG | 0.316396 | 3.2:+619407 | None:intergenic |
ACCAAGTCATAGGGCACGTT+TGG | 0.318589 | 3.2:-619002 | MS.gene53280:CDS |
TCCATGTCTTGTCTTCTTCC+AGG | 0.323320 | 3.2:+619440 | None:intergenic |
GGGTACTTCGATGGCGCGCC+GGG | 0.332994 | 3.2:-619196 | MS.gene53280:CDS |
TTGTGCATGTTGGTGTTATA+GGG | 0.335274 | 3.2:+619656 | None:intergenic |
AACTTCTTGGTCTTTGGATT+AGG | 0.336773 | 3.2:-619514 | MS.gene53280:CDS |
ACTTCAATATACCAAGTCAT+AGG | 0.375565 | 3.2:-619012 | MS.gene53280:CDS |
ATACAGCTGGTTTGATTGCT+AGG | 0.379409 | 3.2:-619156 | MS.gene53280:CDS |
AATCAATTTCATGGACAATA+GGG | 0.382464 | 3.2:+618974 | None:intergenic |
TGTTTGTTCATGATGTTGAT+AGG | 0.396580 | 3.2:-619108 | MS.gene53280:CDS |
TGGTTGAGAAAATGAGAAAA+TGG | 0.432620 | 3.2:+619765 | None:intergenic |
ATGAGTGCTATTTATACAGC+TGG | 0.441985 | 3.2:-619169 | MS.gene53280:CDS |
TCTCTTGAATTGTTTGTTGA+GGG | 0.447760 | 3.2:+619578 | None:intergenic |
CTTGTCTTCTTCCAGGAAAA+CGG | 0.456850 | 3.2:+619447 | None:intergenic |
TGCATAATGGATTAATGCAT+TGG | 0.464703 | 3.2:+619615 | None:intergenic |
TTCTTTGTGAAGGTTATTTG+AGG | 0.465004 | 3.2:-619057 | MS.gene53280:CDS |
CCAAGTCATAGGGCACGTTT+GGG | 0.466887 | 3.2:-619001 | MS.gene53280:CDS |
TCTTTGTGAAGGTTATTTGA+GGG | 0.475343 | 3.2:-619056 | MS.gene53280:CDS |
GGGGTACTTCGATGGCGCGC+CGG | 0.481478 | 3.2:-619197 | MS.gene53280:CDS |
CCCAAACGTGCCCTATGACT+TGG | 0.483562 | 3.2:+619001 | None:intergenic |
ATCATGGTGGATGCACCAAC+GGG | 0.492498 | 3.2:-619217 | MS.gene53280:CDS |
ATCTCTTGAATTGTTTGTTG+AGG | 0.496296 | 3.2:+619577 | None:intergenic |
CATGATATGATTCCAACGTT+GGG | 0.499455 | 3.2:+619395 | None:intergenic |
GGGAACAAGAAGGAAGGATT+AGG | 0.499937 | 3.2:-619036 | MS.gene53280:CDS |
TGAAATTTATGATGTGGAAT+GGG | 0.503077 | 3.2:-619245 | MS.gene53280:CDS |
TCCACATCATAAATTTCACT+TGG | 0.503817 | 3.2:+619250 | None:intergenic |
TCCAAGTGAAATTTATGATG+TGG | 0.511674 | 3.2:-619251 | MS.gene53280:CDS |
GTGAAATTTATGATGTGGAA+TGG | 0.519138 | 3.2:-619246 | MS.gene53280:CDS |
GCACCAACGGGGTACTTCGA+TGG | 0.521410 | 3.2:-619205 | MS.gene53280:CDS |
TGTGGAATGGGATGTGATCA+TGG | 0.525871 | 3.2:-619233 | MS.gene53280:CDS |
CATCATTGAACTACGGTGGC+CGG | 0.528792 | 3.2:-619471 | MS.gene53280:CDS |
ATTAATGCATTGGCTAATGA+TGG | 0.530150 | 3.2:+619625 | None:intergenic |
CTTCTTCCAGGAAAACGGTC+CGG | 0.530964 | 3.2:+619452 | None:intergenic |
GTGTTTGAAGTTGTGGTGAG+TGG | 0.533171 | 3.2:+619745 | None:intergenic |
ACATGATATGATTCCAACGT+TGG | 0.536855 | 3.2:+619394 | None:intergenic |
ATTTGAGGGAACAAGAAGGA+AGG | 0.541340 | 3.2:-619042 | MS.gene53280:CDS |
ACTTCGATGGCGCGCCGGGG+AGG | 0.549464 | 3.2:-619192 | MS.gene53280:CDS |
GAAAATTGGAATGGAACAAG+AGG | 0.553174 | 3.2:-619332 | MS.gene53280:CDS |
GTTGTTGGTGTTTGAAGTTG+TGG | 0.560811 | 3.2:+619738 | None:intergenic |
TCCTGGAAGAAGACAAGACA+TGG | 0.567326 | 3.2:-619441 | MS.gene53280:CDS |
GTTGGTGTTATAGGGAGTGA+AGG | 0.571518 | 3.2:+619664 | None:intergenic |
TGAACTAATGAAAATTGGAA+TGG | 0.575241 | 3.2:-619341 | MS.gene53280:CDS |
AATGCATTGGCTAATGATGG+AGG | 0.575854 | 3.2:+619628 | None:intergenic |
CCAATCAAAGTTCCCAACGT+TGG | 0.578373 | 3.2:-619407 | MS.gene53280:CDS |
CTCTTGAATTGTTTGTTGAG+GGG | 0.579049 | 3.2:+619579 | None:intergenic |
ATGCATTGGCTAATGATGGA+GGG | 0.579142 | 3.2:+619629 | None:intergenic |
CTTCAATATACCAAGTCATA+GGG | 0.581013 | 3.2:-619011 | MS.gene53280:CDS |
GGTTATTTGAGGGAACAAGA+AGG | 0.586352 | 3.2:-619046 | MS.gene53280:CDS |
TGATGTTGATAGGAAAGTTG+AGG | 0.590781 | 3.2:-619098 | MS.gene53280:CDS |
GATCATGGTGGATGCACCAA+CGG | 0.605400 | 3.2:-619218 | MS.gene53280:CDS |
TTGGTGTTATAGGGAGTGAA+GGG | 0.609114 | 3.2:+619665 | None:intergenic |
CCAAAGACCAAGAAGTTGCA+AGG | 0.614426 | 3.2:+619520 | None:intergenic |
GCGCCATCGAAGTACCCCGT+TGG | 0.633771 | 3.2:+619202 | None:intergenic |
TAAATAGCACTCATCCTCCC+CGG | 0.635229 | 3.2:+619178 | None:intergenic |
ATGTGGACATCATTGAACTA+CGG | 0.637354 | 3.2:-619478 | MS.gene53280:CDS |
TAGGTCATGATAGTCTCATG+TGG | 0.666366 | 3.2:-619495 | MS.gene53280:CDS |
TGGACATCATTGAACTACGG+TGG | 0.678674 | 3.2:-619475 | MS.gene53280:CDS |
GGTACTTCGATGGCGCGCCG+GGG | 0.680331 | 3.2:-619195 | MS.gene53280:CDS |
GGAATGGGATGTGATCATGG+TGG | 0.725748 | 3.2:-619230 | MS.gene53280:CDS |
TCATGGTGGATGCACCAACG+GGG | 0.763267 | 3.2:-619216 | MS.gene53280:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGATTTTTTTTGAAGAACTT+TGG | + | chr3.2:619223-619242 | None:intergenic | 20.0% |
! | AGTGATGAACTAATGAAAAT+TGG | - | chr3.2:619417-619436 | MS.gene53280:CDS | 25.0% |
! | TGAAATTTATGATGTGGAAT+GGG | - | chr3.2:619518-619537 | MS.gene53280:CDS | 25.0% |
! | TGAACTAATGAAAATTGGAA+TGG | - | chr3.2:619422-619441 | MS.gene53280:CDS | 25.0% |
!! | TTTCTTGTGATGAGATTTTT+GGG | + | chr3.2:619053-619072 | None:intergenic | 25.0% |
!!! | AATCCACATTTTGAAAATCT+TGG | + | chr3.2:619477-619496 | None:intergenic | 25.0% |
!!! | ATCCACATTTTGAAAATCTT+GGG | + | chr3.2:619476-619495 | None:intergenic | 25.0% |
!!! | TGATTTTTGTTGTTGCATAA+TGG | + | chr3.2:619164-619183 | None:intergenic | 25.0% |
ACTTCAATATACCAAGTCAT+AGG | - | chr3.2:619751-619770 | MS.gene53280:CDS | 30.0% | |
ATTGCTAGGAATAGAGAAAA+TGG | - | chr3.2:619621-619640 | MS.gene53280:CDS | 30.0% | |
CTTCAATATACCAAGTCATA+GGG | - | chr3.2:619752-619771 | MS.gene53280:CDS | 30.0% | |
GTGAAATTTATGATGTGGAA+TGG | - | chr3.2:619517-619536 | MS.gene53280:CDS | 30.0% | |
TCCAAGTGAAATTTATGATG+TGG | - | chr3.2:619512-619531 | MS.gene53280:CDS | 30.0% | |
TCCACATCATAAATTTCACT+TGG | + | chr3.2:619516-619535 | None:intergenic | 30.0% | |
TCTTTGTGAAGGTTATTTGA+GGG | - | chr3.2:619707-619726 | MS.gene53280:CDS | 30.0% | |
TGGTTGAGAAAATGAGAAAA+TGG | + | chr3.2:619001-619020 | None:intergenic | 30.0% | |
TGTTTGTTCATGATGTTGAT+AGG | - | chr3.2:619655-619674 | MS.gene53280:CDS | 30.0% | |
TTCTTTGTGAAGGTTATTTG+AGG | - | chr3.2:619706-619725 | MS.gene53280:CDS | 30.0% | |
! | AGTTGAGGATCAATTTTCAA+AGG | - | chr3.2:619680-619699 | MS.gene53280:CDS | 30.0% |
! | ATCTCTTGAATTGTTTGTTG+AGG | + | chr3.2:619189-619208 | None:intergenic | 30.0% |
! | GTTTCTTGTGATGAGATTTT+TGG | + | chr3.2:619054-619073 | None:intergenic | 30.0% |
! | TCTCTTGAATTGTTTGTTGA+GGG | + | chr3.2:619188-619207 | None:intergenic | 30.0% |
!! | AAATGTGGATTAGCACTTAA+AGG | - | chr3.2:619486-619505 | MS.gene53280:CDS | 30.0% |
!! | ATTAATGCATTGGCTAATGA+TGG | + | chr3.2:619141-619160 | None:intergenic | 30.0% |
!! | TGCATAATGGATTAATGCAT+TGG | + | chr3.2:619151-619170 | None:intergenic | 30.0% |
AAAATCACCTTGCAACTTCT+TGG | - | chr3.2:619236-619255 | MS.gene53280:CDS | 35.0% | |
ACATGATATGATTCCAACGT+TGG | + | chr3.2:619372-619391 | None:intergenic | 35.0% | |
ATGTGGACATCATTGAACTA+CGG | - | chr3.2:619285-619304 | MS.gene53280:CDS | 35.0% | |
CATGATATGATTCCAACGTT+GGG | + | chr3.2:619371-619390 | None:intergenic | 35.0% | |
GAAAATTGGAATGGAACAAG+AGG | - | chr3.2:619431-619450 | MS.gene53280:CDS | 35.0% | |
! | AACTTCTTGGTCTTTGGATT+AGG | - | chr3.2:619249-619268 | MS.gene53280:CDS | 35.0% |
! | CTCTTGAATTGTTTGTTGAG+GGG | + | chr3.2:619187-619206 | None:intergenic | 35.0% |
! | GACCCAAGATTTTCAAAATG+TGG | - | chr3.2:619471-619490 | MS.gene53280:CDS | 35.0% |
! | TCAAAGGCTTTTCTTTGTGA+AGG | - | chr3.2:619696-619715 | MS.gene53280:CDS | 35.0% |
! | TGATGTTGATAGGAAAGTTG+AGG | - | chr3.2:619665-619684 | MS.gene53280:CDS | 35.0% |
!! | ATGAGTGCTATTTATACAGC+TGG | - | chr3.2:619594-619613 | MS.gene53280:CDS | 35.0% |
!! | TTGTGCATGTTGGTGTTATA+GGG | + | chr3.2:619110-619129 | None:intergenic | 35.0% |
!! | TTTGTGCATGTTGGTGTTAT+AGG | + | chr3.2:619111-619130 | None:intergenic | 35.0% |
ATTTGAGGGAACAAGAAGGA+AGG | - | chr3.2:619721-619740 | MS.gene53280:CDS | 40.0% | |
CTTGTCTTCTTCCAGGAAAA+CGG | + | chr3.2:619319-619338 | None:intergenic | 40.0% | |
GGTTATTTGAGGGAACAAGA+AGG | - | chr3.2:619717-619736 | MS.gene53280:CDS | 40.0% | |
TAGGTCATGATAGTCTCATG+TGG | - | chr3.2:619268-619287 | MS.gene53280:CDS | 40.0% | |
! | GTTGTTGGTGTTTGAAGTTG+TGG | + | chr3.2:619028-619047 | None:intergenic | 40.0% |
!! | AATGCATTGGCTAATGATGG+AGG | + | chr3.2:619138-619157 | None:intergenic | 40.0% |
!! | ATACAGCTGGTTTGATTGCT+AGG | - | chr3.2:619607-619626 | MS.gene53280:CDS | 40.0% |
!! | ATGCATTGGCTAATGATGGA+GGG | + | chr3.2:619137-619156 | None:intergenic | 40.0% |
!! | TTGGTGTTATAGGGAGTGAA+GGG | + | chr3.2:619101-619120 | None:intergenic | 40.0% |
!!! | TGAGATTTTTGGGTCGTTGT+TGG | + | chr3.2:619043-619062 | None:intergenic | 40.0% |
CCAAAGACCAAGAAGTTGCA+AGG | + | chr3.2:619246-619265 | None:intergenic | 45.0% | |
CCAACGTTGGGAACTTTGAT+TGG | + | chr3.2:619359-619378 | None:intergenic | 45.0% | |
CCAATCAAAGTTCCCAACGT+TGG | - | chr3.2:619356-619375 | MS.gene53280:CDS | 45.0% | |
GGGAACAAGAAGGAAGGATT+AGG | - | chr3.2:619727-619746 | MS.gene53280:CDS | 45.0% | |
TAAATAGCACTCATCCTCCC+CGG | + | chr3.2:619588-619607 | None:intergenic | 45.0% | |
TCCATGTCTTGTCTTCTTCC+AGG | + | chr3.2:619326-619345 | None:intergenic | 45.0% | |
TCCTGGAAGAAGACAAGACA+TGG | - | chr3.2:619322-619341 | MS.gene53280:CDS | 45.0% | |
TGGACATCATTGAACTACGG+TGG | - | chr3.2:619288-619307 | MS.gene53280:CDS | 45.0% | |
TGTGGAATGGGATGTGATCA+TGG | - | chr3.2:619530-619549 | MS.gene53280:CDS | 45.0% | |
! | CCTTGCAACTTCTTGGTCTT+TGG | - | chr3.2:619243-619262 | MS.gene53280:CDS | 45.0% |
! | GTGTTTGAAGTTGTGGTGAG+TGG | + | chr3.2:619021-619040 | None:intergenic | 45.0% |
!! | GTTGGTGTTATAGGGAGTGA+AGG | + | chr3.2:619102-619121 | None:intergenic | 45.0% |
!!! | GGAGGGTTTTTTGTGCATGT+TGG | + | chr3.2:619120-619139 | None:intergenic | 45.0% |
ACCAAGTCATAGGGCACGTT+TGG | - | chr3.2:619761-619780 | MS.gene53280:CDS | 50.0% | |
CATCATTGAACTACGGTGGC+CGG | - | chr3.2:619292-619311 | MS.gene53280:CDS | 50.0% | |
CCAAGTCATAGGGCACGTTT+GGG | - | chr3.2:619762-619781 | MS.gene53280:CDS | 50.0% | |
CTTCTTCCAGGAAAACGGTC+CGG | + | chr3.2:619314-619333 | None:intergenic | 50.0% | |
GGAATGGGATGTGATCATGG+TGG | - | chr3.2:619533-619552 | MS.gene53280:CDS | 50.0% | |
!! | ATCATGGTGGATGCACCAAC+GGG | - | chr3.2:619546-619565 | MS.gene53280:CDS | 50.0% |
!! | GATCATGGTGGATGCACCAA+CGG | - | chr3.2:619545-619564 | MS.gene53280:CDS | 50.0% |
CCCAAACGTGCCCTATGACT+TGG | + | chr3.2:619765-619784 | None:intergenic | 55.0% | |
!! | TCATGGTGGATGCACCAACG+GGG | - | chr3.2:619547-619566 | MS.gene53280:CDS | 55.0% |
! | GCACCAACGGGGTACTTCGA+TGG | - | chr3.2:619558-619577 | MS.gene53280:CDS | 60.0% |
! | GCGCCATCGAAGTACCCCGT+TGG | + | chr3.2:619564-619583 | None:intergenic | 65.0% |
GGGTACTTCGATGGCGCGCC+GGG | - | chr3.2:619567-619586 | MS.gene53280:CDS | 70.0% | |
GGTACTTCGATGGCGCGCCG+GGG | - | chr3.2:619568-619587 | MS.gene53280:CDS | 70.0% | |
! | CGGTGGCCGGACCGTTTTCC+TGG | - | chr3.2:619305-619324 | MS.gene53280:CDS | 70.0% |
! | GGGGTACTTCGATGGCGCGC+CGG | - | chr3.2:619566-619585 | MS.gene53280:CDS | 70.0% |
ACTTCGATGGCGCGCCGGGG+AGG | - | chr3.2:619571-619590 | MS.gene53280:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 618982 | 619803 | 618982 | ID=MS.gene53280 |
chr3.2 | mRNA | 618982 | 619803 | 618982 | ID=MS.gene53280.t1;Parent=MS.gene53280 |
chr3.2 | exon | 618982 | 619803 | 618982 | ID=MS.gene53280.t1.exon1;Parent=MS.gene53280.t1 |
chr3.2 | CDS | 618982 | 619803 | 618982 | ID=cds.MS.gene53280.t1;Parent=MS.gene53280.t1 |
Gene Sequence |
Protein sequence |