Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53602.t1 | AFK44120.1 | 95.8 | 216 | 9 | 0 | 27 | 242 | 32 | 247 | 2.90E-90 | 341.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53602.t1 | Q9LIQ6 | 70.8 | 216 | 50 | 2 | 27 | 242 | 32 | 234 | 3.0e-64 | 246.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53602.t1 | B7FI89 | 97.2 | 216 | 6 | 0 | 27 | 242 | 32 | 247 | 2.1e-90 | 341.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049343 | MS.gene53602 | 0.832231 | 1.06E-55 | -1.69E-46 |
| MS.gene050905 | MS.gene53602 | -0.815994 | 6.95E-52 | -1.69E-46 |
| MS.gene051452 | MS.gene53602 | 0.807599 | 4.67E-50 | -1.69E-46 |
| MS.gene052519 | MS.gene53602 | 0.813378 | 2.64E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene53602 | 0.812176 | 4.84E-51 | -1.69E-46 |
| MS.gene053008 | MS.gene53602 | 0.812157 | 4.88E-51 | -1.69E-46 |
| MS.gene055623 | MS.gene53602 | 0.806218 | 9.15E-50 | -1.69E-46 |
| MS.gene055818 | MS.gene53602 | 0.807932 | 3.97E-50 | -1.69E-46 |
| MS.gene057208 | MS.gene53602 | 0.80348 | 3.42E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene53602 | 0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene058783 | MS.gene53602 | 0.813984 | 1.94E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene53602 | 0.82448 | 7.89E-54 | -1.69E-46 |
| MS.gene060685 | MS.gene53602 | 0.805856 | 1.09E-49 | -1.69E-46 |
| MS.gene060803 | MS.gene53602 | 0.826219 | 3.06E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53602.t1 | MTR_1g046460 | 97.222 | 216 | 6 | 0 | 27 | 242 | 32 | 247 | 2.18e-159 | 441 |
| MS.gene53602.t1 | MTR_7g085450 | 35.326 | 184 | 107 | 4 | 57 | 232 | 77 | 256 | 3.24e-31 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53602.t1 | AT3G24010 | 66.204 | 216 | 60 | 4 | 27 | 242 | 32 | 234 | 7.48e-90 | 265 |
| MS.gene53602.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 9 | 174 | 9.70e-32 | 115 |
| MS.gene53602.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 70 | 235 | 4.00e-31 | 115 |
| MS.gene53602.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 70 | 235 | 4.00e-31 | 115 |
| MS.gene53602.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 70 | 235 | 4.00e-31 | 115 |
| MS.gene53602.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 90 | 255 | 5.01e-31 | 115 |
| MS.gene53602.t1 | AT1G54390 | 37.870 | 169 | 95 | 5 | 71 | 232 | 90 | 255 | 5.01e-31 | 115 |
Find 57 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAATAGAGTGGTTTCATTT+TGG | 0.253291 | 1.2:-29262437 | MS.gene53602:CDS |
| TACTTCTTATGAAGAATATT+AGG | 0.324596 | 1.2:+29266601 | None:intergenic |
| AAGCAGTATGTGGGTTCATT+TGG | 0.325444 | 1.2:+29262603 | None:intergenic |
| CCTGATGGAAATACAAAATC+TGG | 0.330861 | 1.2:-29264503 | MS.gene53602:CDS |
| AAGAACAACCAAAAGGAAAA+TGG | 0.346656 | 1.2:-29262400 | MS.gene53602:CDS |
| CTGCCGCTGCTGTTGCAGTT+TGG | 0.346888 | 1.2:+29262697 | None:intergenic |
| CCATTTCTCCATAGCTAACT+TGG | 0.349587 | 1.2:+29262574 | None:intergenic |
| GGCTGTCCAGGCATACGATT+TGG | 0.377614 | 1.2:-29265318 | MS.gene53602:intron |
| GCCAGCCTCATTTGCCTCTC+CGG | 0.403443 | 1.2:+29262345 | None:intergenic |
| GTGGGTTCATTTGGATCAAC+GGG | 0.405667 | 1.2:+29262612 | None:intergenic |
| AGAGAAAATGCTGCAATAAC+GGG | 0.418026 | 1.2:-29264542 | MS.gene53602:CDS |
| AGCAAGAAATTGAAGATATT+AGG | 0.418785 | 1.2:-29265454 | MS.gene53602:CDS |
| CCAAGTTAGCTATGGAGAAA+TGG | 0.433955 | 1.2:-29262574 | MS.gene53602:CDS |
| AAAAGTTTGACGAGGAGCTT+CGG | 0.439013 | 1.2:-29264716 | MS.gene53602:CDS |
| CTTACCTCAATGTTGTAAAG+AGG | 0.452569 | 1.2:+29267014 | None:intergenic |
| AAGAGAAAATGCTGCAATAA+CGG | 0.462989 | 1.2:-29264543 | MS.gene53602:CDS |
| GCCAGTAGGGTTTGCAGATG+TGG | 0.471309 | 1.2:+29262650 | None:intergenic |
| AAAAGTCGCCTTGGCTGTCC+AGG | 0.479796 | 1.2:-29265330 | MS.gene53602:CDS |
| TTGGTTGCAAAAGCAGTATG+TGG | 0.499256 | 1.2:+29262593 | None:intergenic |
| AATCTAATAGCTGAGGTATC+CGG | 0.503643 | 1.2:+29265404 | None:intergenic |
| TCTGGAAAGGAAGGCGGTAG+AGG | 0.505564 | 1.2:-29264485 | MS.gene53602:CDS |
| ATGAACAAAAGCATAGCATC+AGG | 0.508393 | 1.2:-29265364 | MS.gene53602:CDS |
| GCCACATCTGCAAACCCTAC+TGG | 0.508937 | 1.2:-29262651 | MS.gene53602:CDS |
| TGATTACCAAATCGTATGCC+TGG | 0.512770 | 1.2:+29265312 | None:intergenic |
| AACTGCAACAGCAGCGGCAG+TGG | 0.517916 | 1.2:-29262694 | MS.gene53602:CDS |
| ATTAGGCGAGGAGTTCGATC+TGG | 0.518526 | 1.2:-29265437 | MS.gene53602:CDS |
| CAGTTTGGACAGATGCTGCT+TGG | 0.529704 | 1.2:+29262712 | None:intergenic |
| TTTCCATCAGGACTTGAAGT+AGG | 0.540325 | 1.2:+29264515 | None:intergenic |
| ATCTGCAAACCCTACTGGCA+TGG | 0.540608 | 1.2:-29262646 | MS.gene53602:CDS |
| TGTGGGTTCATTTGGATCAA+CGG | 0.548467 | 1.2:+29262611 | None:intergenic |
| TGCACCTCTTTACAACATTG+AGG | 0.558261 | 1.2:-29267018 | MS.gene53602:intron |
| TGGAAATACAAAATCTGGAA+AGG | 0.560041 | 1.2:-29264498 | MS.gene53602:CDS |
| GCGCCTACTTCAAGTCCTGA+TGG | 0.561524 | 1.2:-29264518 | MS.gene53602:CDS |
| AATACAAAATCTGGAAAGGA+AGG | 0.564186 | 1.2:-29264494 | MS.gene53602:CDS |
| AAATCTAAATCCATGCCAGT+AGG | 0.571887 | 1.2:+29262636 | None:intergenic |
| GGAAAGGAAGGCGGTAGAGG+AGG | 0.572709 | 1.2:-29264482 | MS.gene53602:CDS |
| GGCTTGAAAGAACAACCAAA+AGG | 0.577624 | 1.2:-29262407 | MS.gene53602:CDS |
| CTGTATGACCAGATAATCAA+AGG | 0.577866 | 1.2:-29265496 | MS.gene53602:intron |
| AATCGCCGGAGAGGCAAATG+AGG | 0.587113 | 1.2:-29262350 | None:intergenic |
| AATTTCAGTGCAAAATAGAG+TGG | 0.587441 | 1.2:-29262448 | MS.gene53602:intron |
| ACGACGCGGTTCTCTACCAC+CGG | 0.609995 | 1.2:+29267040 | None:intergenic |
| TCGATCTGGAAACATCATAC+CGG | 0.617477 | 1.2:-29265423 | MS.gene53602:CDS |
| TGGTTGCAAAAGCAGTATGT+GGG | 0.617588 | 1.2:+29262594 | None:intergenic |
| AATCTAAATCCATGCCAGTA+GGG | 0.619977 | 1.2:+29262637 | None:intergenic |
| ATCGTATGCCTGGACAGCCA+AGG | 0.620003 | 1.2:+29265322 | None:intergenic |
| ATCAGAGAATCTAATAGCTG+AGG | 0.624258 | 1.2:+29265397 | None:intergenic |
| GTGCCGCAACAAGAAATCGC+CGG | 0.626979 | 1.2:-29262364 | MS.gene53602:CDS |
| ACATACATCAGGGTTATCAC+AGG | 0.628537 | 1.2:+29262548 | None:intergenic |
| GAAATTGAAGATATTAGGCG+AGG | 0.633046 | 1.2:-29265449 | MS.gene53602:CDS |
| GCAACAAGAAATCGCCGGAG+AGG | 0.647160 | 1.2:-29262359 | MS.gene53602:CDS |
| TCTCCGGCGATTTCTTGTTG+CGG | 0.647908 | 1.2:+29262361 | None:intergenic |
| TGTCCAAACTGCAACAGCAG+CGG | 0.650946 | 1.2:-29262700 | MS.gene53602:CDS |
| TTGTAAAGAGGTGCACGACG+CGG | 0.664606 | 1.2:+29267026 | None:intergenic |
| TTTGACGAGGAGCTTCGGCG+TGG | 0.666051 | 1.2:-29264711 | MS.gene53602:intron |
| ACAAAATCTGGAAAGGAAGG+CGG | 0.676560 | 1.2:-29264491 | MS.gene53602:CDS |
| ATTAGTGACATTATGCACAC+CGG | 0.688818 | 1.2:-29267059 | None:intergenic |
| AGTGACATTATGCACACCGG+TGG | 0.706105 | 1.2:-29267056 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAATATTGTATAAAATTAT+AGG | - | chr1.2:29263257-29263276 | MS.gene53602:intron | 10.0% |
| !! | AAATGAAAATACGATAAAAA+AGG | + | chr1.2:29262527-29262546 | None:intergenic | 15.0% |
| !! | AATAACCAAAATAATCATTT+AGG | - | chr1.2:29265875-29265894 | MS.gene53602:intron | 15.0% |
| !! | ATATATAACTCAAAAAGAAA+AGG | + | chr1.2:29266471-29266490 | None:intergenic | 15.0% |
| !! | TATATAACTCAAAAAGAAAA+GGG | + | chr1.2:29266470-29266489 | None:intergenic | 15.0% |
| !! | TTATAATAAGATTTGATTCA+TGG | - | chr1.2:29263477-29263496 | MS.gene53602:intron | 15.0% |
| !!! | TAATTCCTAAATGATTATTT+TGG | + | chr1.2:29265883-29265902 | None:intergenic | 15.0% |
| !! | AAAGTCAATATTTGTAATGA+TGG | - | chr1.2:29263211-29263230 | MS.gene53602:intron | 20.0% |
| !! | AAATACGATAAAAAAGGAAA+AGG | + | chr1.2:29262521-29262540 | None:intergenic | 20.0% |
| !! | AAGTTGAATCATATTGTAAT+CGG | - | chr1.2:29264772-29264791 | MS.gene53602:intron | 20.0% |
| !! | AATAAAAATTGAAAAGTTCC+AGG | - | chr1.2:29265146-29265165 | MS.gene53602:intron | 20.0% |
| !! | AATAACATTAATCAACATGT+AGG | - | chr1.2:29265254-29265273 | MS.gene53602:intron | 20.0% |
| !! | AATTACATATCCTCATATTT+GGG | + | chr1.2:29266195-29266214 | None:intergenic | 20.0% |
| !! | ATAACATTAATCAACATGTA+GGG | - | chr1.2:29265255-29265274 | MS.gene53602:intron | 20.0% |
| !! | ATAGATATTCGAAAAGTTTA+AGG | - | chr1.2:29262430-29262449 | MS.gene53602:CDS | 20.0% |
| !! | ATATAACTCAAAAAGAAAAG+GGG | + | chr1.2:29266469-29266488 | None:intergenic | 20.0% |
| !! | CTATTCTATCAATAATATTC+AGG | + | chr1.2:29265775-29265794 | None:intergenic | 20.0% |
| !! | TACTTCTTATGAAGAATATT+AGG | + | chr1.2:29262801-29262820 | None:intergenic | 20.0% |
| !! | TAGATATTCGAAAAGTTTAA+GGG | - | chr1.2:29262431-29262450 | MS.gene53602:CDS | 20.0% |
| !! | TATACTCATGTTAATATACT+TGG | - | chr1.2:29264430-29264449 | MS.gene53602:intron | 20.0% |
| !! | TATTTACTTATACGAACTAA+AGG | + | chr1.2:29263095-29263114 | None:intergenic | 20.0% |
| !! | TTAAATACATGTAACAAGAT+AGG | + | chr1.2:29264114-29264133 | None:intergenic | 20.0% |
| !! | TTCGAATATCTATTTATTGA+CGG | + | chr1.2:29262423-29262442 | None:intergenic | 20.0% |
| !!! | AAAAAGTACGTAATACATTT+TGG | - | chr1.2:29264944-29264963 | MS.gene53602:intron | 20.0% |
| !!! | ATGTTTCATTATTTTATTGC+AGG | - | chr1.2:29264624-29264643 | MS.gene53602:intron | 20.0% |
| !!! | ATTTAGTCATTTAGTGATTT+TGG | - | chr1.2:29263288-29263307 | MS.gene53602:intron | 20.0% |
| !!! | TACTTTGCTATATTAAATGA+AGG | - | chr1.2:29263767-29263786 | MS.gene53602:intron | 20.0% |
| ! | AAAAAAGGAAAAGGTTACTA+TGG | + | chr1.2:29262512-29262531 | None:intergenic | 25.0% |
| ! | AAATTGAAATCGAGAAAAGA+AGG | + | chr1.2:29262655-29262674 | None:intergenic | 25.0% |
| ! | AACAAGATTAACTAGACATT+AGG | - | chr1.2:29265120-29265139 | MS.gene53602:intron | 25.0% |
| ! | AAGCATGACATATAAAACAA+TGG | + | chr1.2:29262974-29262993 | None:intergenic | 25.0% |
| ! | ACAGATTTGTGACAAAAAAT+TGG | + | chr1.2:29264461-29264480 | None:intergenic | 25.0% |
| ! | AGAAATCAACTATAATGCTA+TGG | - | chr1.2:29265353-29265372 | MS.gene53602:CDS | 25.0% |
| ! | AGCAAGAAATTGAAGATATT+AGG | - | chr1.2:29263945-29263964 | MS.gene53602:intron | 25.0% |
| ! | ATAAGATTTGATTCATGGTT+TGG | - | chr1.2:29263482-29263501 | MS.gene53602:intron | 25.0% |
| ! | ATTTACGTCACATAATAAAC+TGG | - | chr1.2:29263614-29263633 | MS.gene53602:intron | 25.0% |
| ! | CAATTACATATCCTCATATT+TGG | + | chr1.2:29266196-29266215 | None:intergenic | 25.0% |
| ! | CACATAACATTATTGACATA+TGG | + | chr1.2:29265555-29265574 | None:intergenic | 25.0% |
| ! | GTACATATTTCAGATTGTTA+TGG | + | chr1.2:29265328-29265347 | None:intergenic | 25.0% |
| ! | TAACATTAATCAACATGTAG+GGG | - | chr1.2:29265256-29265275 | MS.gene53602:intron | 25.0% |
| ! | TAAGAAACTTATGTATTCTG+TGG | + | chr1.2:29265943-29265962 | None:intergenic | 25.0% |
| ! | TACTAAATAGTACTATTGTG+TGG | - | chr1.2:29264352-29264371 | MS.gene53602:intron | 25.0% |
| ! | TATAACTCAAAAAGAAAAGG+GGG | + | chr1.2:29266468-29266487 | None:intergenic | 25.0% |
| ! | TATGTTCATCAACCAAATTT+AGG | + | chr1.2:29264381-29264400 | None:intergenic | 25.0% |
| ! | TCAAAATATGTATGGAATGT+AGG | + | chr1.2:29266920-29266939 | None:intergenic | 25.0% |
| ! | TCACATTATAAATACAAGTG+AGG | - | chr1.2:29264522-29264541 | MS.gene53602:CDS | 25.0% |
| ! | TTACTATGGTACAATAGTAT+AGG | + | chr1.2:29262498-29262517 | None:intergenic | 25.0% |
| ! | TTGTTACATGTATTTAACCA+AGG | - | chr1.2:29264117-29264136 | MS.gene53602:intron | 25.0% |
| ! | TTTGGTATTTAAGAGACTAA+TGG | - | chr1.2:29265737-29265756 | MS.gene53602:intron | 25.0% |
| !! | AAAATAGAGTGGTTTCATTT+TGG | - | chr1.2:29266962-29266981 | MS.gene53602:intron | 25.0% |
| !! | AACAATCTGAAATATGTACA+AGG | - | chr1.2:29265329-29265348 | MS.gene53602:CDS | 25.0% |
| !! | CAATATTTGTAATGATGGAA+CGG | - | chr1.2:29263216-29263235 | MS.gene53602:intron | 25.0% |
| !! | CAATGATTTTCATTACACTA+AGG | - | chr1.2:29264211-29264230 | MS.gene53602:intron | 25.0% |
| !! | GTGAAATGAACTTTAATTTC+AGG | - | chr1.2:29263726-29263745 | MS.gene53602:intron | 25.0% |
| !! | TACCTTGTAAACTTTTATCT+AGG | + | chr1.2:29262839-29262858 | None:intergenic | 25.0% |
| !!! | ATCAAAACATGTCATTTTTG+TGG | - | chr1.2:29263168-29263187 | MS.gene53602:intron | 25.0% |
| !!! | CAAAAATGACATGTTTTGAT+TGG | + | chr1.2:29263168-29263187 | None:intergenic | 25.0% |
| !!! | CATGTATTTTTTTACACTGT+CGG | - | chr1.2:29262920-29262939 | MS.gene53602:intron | 25.0% |
| !!! | TCTGTATTTCTAGATAGAAA+AGG | - | chr1.2:29265176-29265195 | MS.gene53602:intron | 25.0% |
| AAGAACAACCAAAAGGAAAA+TGG | - | chr1.2:29266999-29267018 | MS.gene53602:intron | 30.0% | |
| AAGAGAAAATGCTGCAATAA+CGG | - | chr1.2:29264856-29264875 | MS.gene53602:intron | 30.0% | |
| AAGGAATGGGGAATAATTTA+AGG | + | chr1.2:29265507-29265526 | None:intergenic | 30.0% | |
| AATAACATTCGCAAATTGAG+TGG | + | chr1.2:29264737-29264756 | None:intergenic | 30.0% | |
| AATACAAAATCTGGAAAGGA+AGG | - | chr1.2:29264905-29264924 | MS.gene53602:intron | 30.0% | |
| AATGGGGAATAATTTAAGGA+TGG | + | chr1.2:29265503-29265522 | None:intergenic | 30.0% | |
| AATTTCAGTGCAAAATAGAG+TGG | - | chr1.2:29266951-29266970 | MS.gene53602:intron | 30.0% | |
| ACCATTATTTGTATCCTTTG+GGG | - | chr1.2:29266433-29266452 | MS.gene53602:intron | 30.0% | |
| AGAAATACAGAAAGAATTCC+TGG | + | chr1.2:29265167-29265186 | None:intergenic | 30.0% | |
| AGATACAAATAGCAGATTTG+TGG | + | chr1.2:29264167-29264186 | None:intergenic | 30.0% | |
| AGATAGCGTCAAAATATGTA+TGG | + | chr1.2:29266928-29266947 | None:intergenic | 30.0% | |
| AGGAAAAAAAAAACAGACTC+AGG | + | chr1.2:29266359-29266378 | None:intergenic | 30.0% | |
| ATAACTCAAAAAGAAAAGGG+GGG | + | chr1.2:29266467-29266486 | None:intergenic | 30.0% | |
| ATATCTGAAAAAGTTTGACG+AGG | - | chr1.2:29264675-29264694 | MS.gene53602:intron | 30.0% | |
| ATCATTGATCAGATTATCCT+TGG | + | chr1.2:29264137-29264156 | None:intergenic | 30.0% | |
| ATTCTATATGAAGCCGAATA+AGG | + | chr1.2:29263400-29263419 | None:intergenic | 30.0% | |
| ATTCTTCAAGGAATGACATT+AGG | + | chr1.2:29262615-29262634 | None:intergenic | 30.0% | |
| ATTGTGTGGTAACCTAAATT+TGG | - | chr1.2:29264366-29264385 | MS.gene53602:intron | 30.0% | |
| CATTGTAAAACCCAAATATG+AGG | - | chr1.2:29266182-29266201 | MS.gene53602:intron | 30.0% | |
| GAAAGTAGAAACATACATCA+GGG | + | chr1.2:29266864-29266883 | None:intergenic | 30.0% | |
| GAAATTACAATTGCTGCAAT+AGG | - | chr1.2:29265838-29265857 | MS.gene53602:intron | 30.0% | |
| GAAGAAAGAATTAAGGAATG+GGG | + | chr1.2:29265519-29265538 | None:intergenic | 30.0% | |
| GACCATTATTTGTATCCTTT+GGG | - | chr1.2:29266432-29266451 | MS.gene53602:intron | 30.0% | |
| GACCTAGATAAAAGTTTACA+AGG | - | chr1.2:29262834-29262853 | MS.gene53602:intron | 30.0% | |
| GAGAAATTAGGAACTATATC+AGG | + | chr1.2:29264831-29264850 | None:intergenic | 30.0% | |
| GGAAGAAAGAATTAAGGAAT+GGG | + | chr1.2:29265520-29265539 | None:intergenic | 30.0% | |
| TACTCTGTTACGTTAAGATA+TGG | - | chr1.2:29265049-29265068 | MS.gene53602:intron | 30.0% | |
| TAGGATATCTGATGAAGATT+CGG | + | chr1.2:29266272-29266291 | None:intergenic | 30.0% | |
| TCAACTATAATGCTATGGAA+TGG | - | chr1.2:29265358-29265377 | MS.gene53602:CDS | 30.0% | |
| TGAAAGTAGAAACATACATC+AGG | + | chr1.2:29266865-29266884 | None:intergenic | 30.0% | |
| TGGAAATACAAAATCTGGAA+AGG | - | chr1.2:29264901-29264920 | MS.gene53602:intron | 30.0% | |
| TGGAAGAAAGAATTAAGGAA+TGG | + | chr1.2:29265521-29265540 | None:intergenic | 30.0% | |
| TGTATGGAATGTAGGTAAAA+TGG | + | chr1.2:29266912-29266931 | None:intergenic | 30.0% | |
| TTATGAGTTTGTGCATACTA+AGG | + | chr1.2:29263587-29263606 | None:intergenic | 30.0% | |
| TTCATGTTATGCTTGATCTT+TGG | - | chr1.2:29265719-29265738 | MS.gene53602:intron | 30.0% | |
| TTCTCTTTCTGTGAGAAATT+AGG | + | chr1.2:29264843-29264862 | None:intergenic | 30.0% | |
| TTCTTCAAGGAATGACATTA+GGG | + | chr1.2:29262614-29262633 | None:intergenic | 30.0% | |
| TTGAAATTCACTCTAAACAG+AGG | - | chr1.2:29265295-29265314 | MS.gene53602:intron | 30.0% | |
| ! | AACCTCACTTTAAAAGCTAT+AGG | + | chr1.2:29266534-29266553 | None:intergenic | 30.0% |
| ! | ATACGAACTAAAGGTATACA+CGG | + | chr1.2:29263086-29263105 | None:intergenic | 30.0% |
| ! | TCATTTTGCCTTTGATTATC+TGG | + | chr1.2:29263914-29263933 | None:intergenic | 30.0% |
| ! | TGTCTGTGTAAAACTGTTTT+CGG | - | chr1.2:29263056-29263075 | MS.gene53602:intron | 30.0% |
| ! | TTATACTGTCTTTTGTGCTT+AGG | - | chr1.2:29263419-29263438 | MS.gene53602:intron | 30.0% |
| !! | CGGTTTAAAACAGTTTTACA+CGG | - | chr1.2:29262940-29262959 | MS.gene53602:intron | 30.0% |
| !! | GGTTTAAAACAGTTTTACAC+GGG | - | chr1.2:29262941-29262960 | MS.gene53602:intron | 30.0% |
| !! | GTTTTATGTTGGATTAGGTT+GGG | + | chr1.2:29265921-29265940 | None:intergenic | 30.0% |
| !!! | AAATGACATGTTTTGATTGG+CGG | + | chr1.2:29263165-29263184 | None:intergenic | 30.0% |
| !!! | ATCCTATAGCTTTTAAAGTG+AGG | - | chr1.2:29266529-29266548 | MS.gene53602:intron | 30.0% |
| !!! | TGTATTCTGTGGTTTTATGT+TGG | + | chr1.2:29265932-29265951 | None:intergenic | 30.0% |
| !!! | TGTCATTTTTGTGGCTTTTA+AGG | - | chr1.2:29263177-29263196 | MS.gene53602:intron | 30.0% |
| AAAATAACCATACCAGAGTG+GGG | - | chr1.2:29263002-29263021 | MS.gene53602:intron | 35.0% | |
| AAAGGAAAAAGAAGCAGAGA+TGG | + | chr1.2:29265652-29265671 | None:intergenic | 35.0% | |
| AAATCTAAATCCATGCCAGT+AGG | + | chr1.2:29266766-29266785 | None:intergenic | 35.0% | |
| AATACCAGAATGAGTACTTG+AGG | + | chr1.2:29266230-29266249 | None:intergenic | 35.0% | |
| AATCTAAATCCATGCCAGTA+GGG | + | chr1.2:29266765-29266784 | None:intergenic | 35.0% | |
| ACAGAGTACATATGTTGGAA+AGG | + | chr1.2:29265037-29265056 | None:intergenic | 35.0% | |
| ACAGCAAGCAAGATTACTAT+AGG | + | chr1.2:29266291-29266310 | None:intergenic | 35.0% | |
| ACGTAACAGAGTACATATGT+TGG | + | chr1.2:29265042-29265061 | None:intergenic | 35.0% | |
| ACTCAAGATGCGATAAACTA+GGG | + | chr1.2:29263848-29263867 | None:intergenic | 35.0% | |
| AGAGAAAATGCTGCAATAAC+GGG | - | chr1.2:29264857-29264876 | MS.gene53602:intron | 35.0% | |
| AGCGTACAAACAGATTACTA+TGG | - | chr1.2:29266038-29266057 | MS.gene53602:intron | 35.0% | |
| AGGATACAAATAATGGTCCA+AGG | + | chr1.2:29266430-29266449 | None:intergenic | 35.0% | |
| ATCAGAGAATCTAATAGCTG+AGG | + | chr1.2:29264005-29264024 | None:intergenic | 35.0% | |
| CAAAATAACCATACCAGAGT+GGG | - | chr1.2:29263001-29263020 | MS.gene53602:intron | 35.0% | |
| CACATAAACGACAACATGAT+AGG | + | chr1.2:29264996-29265015 | None:intergenic | 35.0% | |
| CATTATTTGTATCCTTTGGG+GGG | - | chr1.2:29266435-29266454 | MS.gene53602:intron | 35.0% | |
| CCAAACTAAATGAATTCCGA+TGG | - | chr1.2:29262468-29262487 | MS.gene53602:intron | 35.0% | |
| CCACAAACATGGATCATTTA+CGG | - | chr1.2:29264258-29264277 | MS.gene53602:intron | 35.0% | |
| CCATCGGAATTCATTTAGTT+TGG | + | chr1.2:29262471-29262490 | None:intergenic | 35.0% | |
| CCATTATTTGTATCCTTTGG+GGG | - | chr1.2:29266434-29266453 | MS.gene53602:intron | 35.0% | |
| CCTGATGGAAATACAAAATC+TGG | - | chr1.2:29264896-29264915 | MS.gene53602:intron | 35.0% | |
| CTATGGTACAATAGTATAGG+TGG | + | chr1.2:29262495-29262514 | None:intergenic | 35.0% | |
| CTGTATGACCAGATAATCAA+AGG | - | chr1.2:29263903-29263922 | MS.gene53602:intron | 35.0% | |
| CTTACCTCAATGTTGTAAAG+AGG | + | chr1.2:29262388-29262407 | None:intergenic | 35.0% | |
| GAAATTGAAGATATTAGGCG+AGG | - | chr1.2:29263950-29263969 | MS.gene53602:intron | 35.0% | |
| GAGACAAGAACAGAACAAAT+GGG | + | chr1.2:29265630-29265649 | None:intergenic | 35.0% | |
| GAGAGTGGAAGAAAGAATTA+AGG | + | chr1.2:29265526-29265545 | None:intergenic | 35.0% | |
| GGACCATTATTTGTATCCTT+TGG | - | chr1.2:29266431-29266450 | MS.gene53602:intron | 35.0% | |
| GGACTAACATGGTTATCAAA+TGG | + | chr1.2:29263539-29263558 | None:intergenic | 35.0% | |
| GTATTGTGCTTCTACATCAA+AGG | + | chr1.2:29263560-29263579 | None:intergenic | 35.0% | |
| GTCAAATGTCGAACAAATGT+TGG | + | chr1.2:29266138-29266157 | None:intergenic | 35.0% | |
| TAAGTTTCTTACCCTTGTTC+TGG | - | chr1.2:29265952-29265971 | MS.gene53602:intron | 35.0% | |
| TACAAAGTACGAACAGTTGT+TGG | - | chr1.2:29264579-29264598 | MS.gene53602:intron | 35.0% | |
| TACATATGTTGGAAAGGACA+AGG | + | chr1.2:29265031-29265050 | None:intergenic | 35.0% | |
| TACTCGCTTGAAATTCTTCA+AGG | + | chr1.2:29262627-29262646 | None:intergenic | 35.0% | |
| TATTTCATTGTCATCCTGCA+AGG | + | chr1.2:29265393-29265412 | None:intergenic | 35.0% | |
| TCAAAATAACCATACCAGAG+TGG | - | chr1.2:29263000-29263019 | MS.gene53602:intron | 35.0% | |
| TCTACATCAAAGGACTAACA+TGG | + | chr1.2:29263550-29263569 | None:intergenic | 35.0% | |
| TCTATCATGTACAGCAAATG+CGG | + | chr1.2:29264310-29264329 | None:intergenic | 35.0% | |
| TGAAGAGTGGTAACCTTATT+CGG | - | chr1.2:29263384-29263403 | MS.gene53602:intron | 35.0% | |
| TGTTTGTTTATTGCCTCCTT+CGG | - | chr1.2:29266308-29266327 | MS.gene53602:intron | 35.0% | |
| TTGAAATCGAGAAAAGAAGG+TGG | + | chr1.2:29262652-29262671 | None:intergenic | 35.0% | |
| ! | AATCTAATAGCTGAGGTATC+CGG | + | chr1.2:29263998-29264017 | None:intergenic | 35.0% |
| ! | ATGAACAAAAGCATAGCATC+AGG | - | chr1.2:29264035-29264054 | MS.gene53602:intron | 35.0% |
| ! | CACTTCTGTCGTAACATTTT+CGG | + | chr1.2:29265234-29265253 | None:intergenic | 35.0% |
| ! | CCAGATTTTGTATTTCCATC+AGG | + | chr1.2:29264899-29264918 | None:intergenic | 35.0% |
| ! | GAACAGTACCATTTTCCTTT+TGG | + | chr1.2:29267010-29267029 | None:intergenic | 35.0% |
| ! | TTTTGCAACCAAGTTAGCTA+TGG | - | chr1.2:29266817-29266836 | MS.gene53602:intron | 35.0% |
| ! | TTTTTCCTTTCCTCCTAAGT+TGG | - | chr1.2:29265662-29265681 | MS.gene53602:intron | 35.0% |
| !! | AAGAAGCATTAACTGATGAC+AGG | + | chr1.2:29265701-29265720 | None:intergenic | 35.0% |
| !! | GGTTTTATGTTGGATTAGGT+TGG | + | chr1.2:29265922-29265941 | None:intergenic | 35.0% |
| !! | TTGTAATGATGGAACGGTTT+TGG | - | chr1.2:29263222-29263241 | MS.gene53602:intron | 35.0% |
| !!! | AATCTTGTTTTCCACATCCT+CGG | + | chr1.2:29265109-29265128 | None:intergenic | 35.0% |
| !!! | CCTTGCTTTTTTCTTTCTCT+GGG | - | chr1.2:29266376-29266395 | MS.gene53602:intron | 35.0% |
| !!! | CTGTGGTTTTATGTTGGATT+AGG | + | chr1.2:29265926-29265945 | None:intergenic | 35.0% |
| !!! | CTTGCTTTTTTCTTTCTCTG+GGG | - | chr1.2:29266377-29266396 | MS.gene53602:intron | 35.0% |
| !!! | GATTTTGGTGTCATTCTTTG+CGG | - | chr1.2:29263303-29263322 | MS.gene53602:intron | 35.0% |
| !!! | GCAAAGTAGTGGATTTTCAT+TGG | - | chr1.2:29263032-29263051 | MS.gene53602:intron | 35.0% |
| !!! | GCGTTTTTTTTCTGCAGATT+TGG | - | chr1.2:29262767-29262786 | MS.gene53602:intron | 35.0% |
| !!! | TCCTTGCTTTTTTCTTTCTC+TGG | - | chr1.2:29266375-29266394 | MS.gene53602:intron | 35.0% |
| AAAAGTTTGACGAGGAGCTT+CGG | - | chr1.2:29264683-29264702 | MS.gene53602:intron | 40.0% | |
| AAATGTTGGTCGTACTGTGA+TGG | + | chr1.2:29266124-29266143 | None:intergenic | 40.0% | |
| AAATTCAGGGGCTTAATGGA+AGG | + | chr1.2:29265455-29265474 | None:intergenic | 40.0% | |
| AACACCCAGTTAACTCAAAC+TGG | - | chr1.2:29265979-29265998 | MS.gene53602:intron | 40.0% | |
| AAGCAGTATGTGGGTTCATT+TGG | + | chr1.2:29266799-29266818 | None:intergenic | 40.0% | |
| AAGTAGACACTAGTTATCCG+AGG | - | chr1.2:29265089-29265108 | MS.gene53602:intron | 40.0% | |
| AATGGAGACAAATTCCTTGC+AGG | - | chr1.2:29265376-29265395 | MS.gene53602:CDS | 40.0% | |
| ACAAAATCTGGAAAGGAAGG+CGG | - | chr1.2:29264908-29264927 | MS.gene53602:intron | 40.0% | |
| ACACCCAGTTAACTCAAACT+GGG | - | chr1.2:29265980-29265999 | MS.gene53602:intron | 40.0% | |
| ACATACATCAGGGTTATCAC+AGG | + | chr1.2:29266854-29266873 | None:intergenic | 40.0% | |
| AGAGATGAAGCATAGTGAGA+AGG | + | chr1.2:29266576-29266595 | None:intergenic | 40.0% | |
| AGCAGAAGTTACAGAACAGA+GGG | - | chr1.2:29265816-29265835 | MS.gene53602:intron | 40.0% | |
| AGGAAAATTCAGGGGCTTAA+TGG | + | chr1.2:29265459-29265478 | None:intergenic | 40.0% | |
| AGGAATGACATTAGGGTTTC+TGG | + | chr1.2:29262607-29262626 | None:intergenic | 40.0% | |
| AGTAAGGAAAACAGGACAGA+GGG | + | chr1.2:29265582-29265601 | None:intergenic | 40.0% | |
| ATTAATAGGGCCAACTTAGG+AGG | + | chr1.2:29265675-29265694 | None:intergenic | 40.0% | |
| ATTCTTTCTTCCACTCTCCT+TGG | - | chr1.2:29265528-29265547 | MS.gene53602:intron | 40.0% | |
| CAATAGTATAGGTGGACCAT+CGG | + | chr1.2:29262487-29262506 | None:intergenic | 40.0% | |
| CATTATTGACATATGGCCCA+AGG | + | chr1.2:29265548-29265567 | None:intergenic | 40.0% | |
| CATTCCTCAAGTACTCATTC+TGG | - | chr1.2:29266223-29266242 | MS.gene53602:intron | 40.0% | |
| CCAAGTTAGCTATGGAGAAA+TGG | - | chr1.2:29266825-29266844 | MS.gene53602:intron | 40.0% | |
| CCATTTCTCCATAGCTAACT+TGG | + | chr1.2:29266828-29266847 | None:intergenic | 40.0% | |
| CCCAGAGAAAGAAAAAAGCA+AGG | + | chr1.2:29266379-29266398 | None:intergenic | 40.0% | |
| CCCCCAAAGGATACAAATAA+TGG | + | chr1.2:29266437-29266456 | None:intergenic | 40.0% | |
| CCGTAAATGATCCATGTTTG+TGG | + | chr1.2:29264261-29264280 | None:intergenic | 40.0% | |
| CTCAAGATGCGATAAACTAG+GGG | + | chr1.2:29263847-29263866 | None:intergenic | 40.0% | |
| CTGTGATGGCATTGTCAATT+CGG | + | chr1.2:29266110-29266129 | None:intergenic | 40.0% | |
| GAATGACATTAGGGTTTCTG+GGG | + | chr1.2:29262605-29262624 | None:intergenic | 40.0% | |
| GACTCAAGATGCGATAAACT+AGG | + | chr1.2:29263849-29263868 | None:intergenic | 40.0% | |
| GGAATGACATTAGGGTTTCT+GGG | + | chr1.2:29262606-29262625 | None:intergenic | 40.0% | |
| GGAGACAAGAACAGAACAAA+TGG | + | chr1.2:29265631-29265650 | None:intergenic | 40.0% | |
| GGCATTTCAATATGCCAGAT+TGG | - | chr1.2:29265197-29265216 | MS.gene53602:intron | 40.0% | |
| GGCTTGAAAGAACAACCAAA+AGG | - | chr1.2:29266992-29267011 | MS.gene53602:intron | 40.0% | |
| GTTTGTACGCTTCCAATGTT+AGG | + | chr1.2:29266029-29266048 | None:intergenic | 40.0% | |
| TAGCAGAAGTTACAGAACAG+AGG | - | chr1.2:29265815-29265834 | MS.gene53602:intron | 40.0% | |
| TCGATCTGGAAACATCATAC+CGG | - | chr1.2:29263976-29263995 | MS.gene53602:intron | 40.0% | |
| TGATGACAGGCCCATTAATA+GGG | + | chr1.2:29265688-29265707 | None:intergenic | 40.0% | |
| TGATTACCAAATCGTATGCC+TGG | + | chr1.2:29264090-29264109 | None:intergenic | 40.0% | |
| TGCACCTCTTTACAACATTG+AGG | - | chr1.2:29262381-29262400 | MS.gene53602:CDS | 40.0% | |
| TGGTTGCAAAAGCAGTATGT+GGG | + | chr1.2:29266808-29266827 | None:intergenic | 40.0% | |
| TGTGGGTTCATTTGGATCAA+CGG | + | chr1.2:29266791-29266810 | None:intergenic | 40.0% | |
| TTCTTTCTTCCACTCTCCTT+GGG | - | chr1.2:29265529-29265548 | MS.gene53602:intron | 40.0% | |
| TTGCTGTACATGATAGAAGC+TGG | - | chr1.2:29264313-29264332 | MS.gene53602:intron | 40.0% | |
| TTGGTTGCAAAAGCAGTATG+TGG | + | chr1.2:29266809-29266828 | None:intergenic | 40.0% | |
| TTTCCATCAGGACTTGAAGT+AGG | + | chr1.2:29264887-29264906 | None:intergenic | 40.0% | |
| ! | CCTAAGTTGGCCCTATTAAT+GGG | - | chr1.2:29265675-29265694 | MS.gene53602:intron | 40.0% |
| ! | TCCTAAGTTGGCCCTATTAA+TGG | - | chr1.2:29265674-29265693 | MS.gene53602:intron | 40.0% |
| ! | TCTGTCCTGTTTTCCTTACT+CGG | - | chr1.2:29265582-29265601 | MS.gene53602:intron | 40.0% |
| !! | AACAGTTGTTGGCTTGTTTC+TGG | - | chr1.2:29264590-29264609 | MS.gene53602:intron | 40.0% |
| !! | TAATGATGGAACGGTTTTGG+CGG | - | chr1.2:29263225-29263244 | MS.gene53602:intron | 40.0% |
| !! | TTTCTCTGGGGTGTGTTTAT+GGG | - | chr1.2:29266389-29266408 | MS.gene53602:intron | 40.0% |
| !!! | GGGTGTTTTAACCAGAACAA+GGG | + | chr1.2:29265966-29265985 | None:intergenic | 40.0% |
| !!! | TGGGTGTTTTAACCAGAACA+AGG | + | chr1.2:29265967-29265986 | None:intergenic | 40.0% |
| !!! | TGGTTTCATTTTGGCTGTGT+TGG | - | chr1.2:29266971-29266990 | MS.gene53602:intron | 40.0% |
| AATTGCGCCTGACCTAACAT+TGG | - | chr1.2:29266014-29266033 | MS.gene53602:intron | 45.0% | |
| ACACTAGTTATCCGAGGATG+TGG | - | chr1.2:29265095-29265114 | MS.gene53602:intron | 45.0% | |
| ACGAACTAGCACCACAAACA+TGG | - | chr1.2:29264247-29264266 | MS.gene53602:intron | 45.0% | |
| ATCATGTACAGCAAATGCGG+TGG | + | chr1.2:29264307-29264326 | None:intergenic | 45.0% | |
| ATGCGATAAACTAGGGGAAG+AGG | + | chr1.2:29263841-29263860 | None:intergenic | 45.0% | |
| ATGTAGTGCGTGTGAATCAG+TGG | - | chr1.2:29263361-29263380 | MS.gene53602:intron | 45.0% | |
| CCCATTAATAGGGCCAACTT+AGG | + | chr1.2:29265678-29265697 | None:intergenic | 45.0% | |
| CTGATGACAGGCCCATTAAT+AGG | + | chr1.2:29265689-29265708 | None:intergenic | 45.0% | |
| CTTCTGCTAGTAGTTACTGC+AGG | + | chr1.2:29265804-29265823 | None:intergenic | 45.0% | |
| GAACGATGCGTTTCGTTTGA+AGG | + | chr1.2:29262580-29262599 | None:intergenic | 45.0% | |
| GAGTAAGGAAAACAGGACAG+AGG | + | chr1.2:29265583-29265602 | None:intergenic | 45.0% | |
| GTGGGTTCATTTGGATCAAC+GGG | + | chr1.2:29266790-29266809 | None:intergenic | 45.0% | |
| TACGCTTCCAATGTTAGGTC+AGG | + | chr1.2:29266024-29266043 | None:intergenic | 45.0% | |
| TCAGGCGCAATTGATTGACA+GGG | + | chr1.2:29266006-29266025 | None:intergenic | 45.0% | |
| TGAGAAACCACACGAAGCTT+TGG | + | chr1.2:29263453-29263472 | None:intergenic | 45.0% | |
| TGCGATAAACTAGGGGAAGA+GGG | + | chr1.2:29263840-29263859 | None:intergenic | 45.0% | |
| TGCTGATGAAAAAGTCGCCT+TGG | - | chr1.2:29264060-29264079 | MS.gene53602:intron | 45.0% | |
| TGTGAATCAGTGGTGAAGAG+TGG | - | chr1.2:29263371-29263390 | MS.gene53602:intron | 45.0% | |
| ! | AGGGGTGTGAGGAAAATTCA+GGG | + | chr1.2:29265468-29265487 | None:intergenic | 45.0% |
| ! | TGCGTTTCGTTTGAAGGTGT+TGG | + | chr1.2:29262574-29262593 | None:intergenic | 45.0% |
| !! | AGGCTTTGTTCAGACAGATG+AGG | + | chr1.2:29264811-29264830 | None:intergenic | 45.0% |
| !! | CTTTCTCTGGGGTGTGTTTA+TGG | - | chr1.2:29266388-29266407 | MS.gene53602:intron | 45.0% |
| !! | GGCTTTGTTCAGACAGATGA+GGG | + | chr1.2:29264810-29264829 | None:intergenic | 45.0% |
| !! | TTTGGTGTCATTCTTTGCGG+TGG | - | chr1.2:29263306-29263325 | MS.gene53602:intron | 45.0% |
| !!! | CATGTTTTGATTGGCGGACA+CGG | + | chr1.2:29263159-29263178 | None:intergenic | 45.0% |
| !!! | AAAAAAAAAATCAAAATTTT+TGG | + | chr1.2:29262693-29262712 | None:intergenic | 5.0% |
| !!! | AAAATTTTGATTTTTTTTTT+AGG | - | chr1.2:29262693-29262712 | MS.gene53602:CDS | 5.0% |
| !!! | AAATTTTGATTTTTTTTTTA+GGG | - | chr1.2:29262694-29262713 | MS.gene53602:CDS | 5.0% |
| ATCTGCAAACCCTACTGGCA+TGG | - | chr1.2:29266753-29266772 | MS.gene53602:intron | 50.0% | |
| ATTAGGCGAGGAGTTCGATC+TGG | - | chr1.2:29263962-29263981 | MS.gene53602:intron | 50.0% | |
| CAGGGGCTTAATGGAAGGTT+GGG | + | chr1.2:29265450-29265469 | None:intergenic | 50.0% | |
| CAGTTTGGACAGATGCTGCT+TGG | + | chr1.2:29266690-29266709 | None:intergenic | 50.0% | |
| CATACCAGAGTGGGGTGATA+TGG | - | chr1.2:29263010-29263029 | MS.gene53602:intron | 50.0% | |
| CATATCACCCCACTCTGGTA+TGG | + | chr1.2:29263012-29263031 | None:intergenic | 50.0% | |
| CGGAGTTACATGCACCAATC+TGG | + | chr1.2:29265214-29265233 | None:intergenic | 50.0% | |
| GGGGTGATATGGCAAAGTAG+TGG | - | chr1.2:29263021-29263040 | MS.gene53602:intron | 50.0% | |
| GGGGTGTGAGGAAAATTCAG+GGG | + | chr1.2:29265467-29265486 | None:intergenic | 50.0% | |
| GTCAGGCGCAATTGATTGAC+AGG | + | chr1.2:29266007-29266026 | None:intergenic | 50.0% | |
| GTTTCTGCCAAAGCTTCGTG+TGG | - | chr1.2:29263443-29263462 | MS.gene53602:intron | 50.0% | |
| TAGGGCCAACTTAGGAGGAA+AGG | + | chr1.2:29265670-29265689 | None:intergenic | 50.0% | |
| TCAGGGGCTTAATGGAAGGT+TGG | + | chr1.2:29265451-29265470 | None:intergenic | 50.0% | |
| TCTCCGGCGATTTCTTGTTG+CGG | + | chr1.2:29267041-29267060 | None:intergenic | 50.0% | |
| TGTCCAAACTGCAACAGCAG+CGG | - | chr1.2:29266699-29266718 | MS.gene53602:intron | 50.0% | |
| TTTGCCATATCACCCCACTC+TGG | + | chr1.2:29263017-29263036 | None:intergenic | 50.0% | |
| ! | AATTTTCCTCACACCCCTCG+TGG | - | chr1.2:29265470-29265489 | MS.gene53602:CDS | 50.0% |
| ! | AGGGCCCAGTTTGAGTTAAC+TGG | + | chr1.2:29265987-29266006 | None:intergenic | 50.0% |
| ! | GAGGGGTGTGAGGAAAATTC+AGG | + | chr1.2:29265469-29265488 | None:intergenic | 50.0% |
| ! | GGGCCCAGTTTGAGTTAACT+GGG | + | chr1.2:29265986-29266005 | None:intergenic | 50.0% |
| ! | TTGTAAAGAGGTGCACGACG+CGG | + | chr1.2:29262376-29262395 | None:intergenic | 50.0% |
| !! | GGATTAGGTTGGGAGAGACT+AGG | + | chr1.2:29265911-29265930 | None:intergenic | 50.0% |
| AAAAGTCGCCTTGGCTGTCC+AGG | - | chr1.2:29264069-29264088 | MS.gene53602:intron | 55.0% | |
| AATCGCCGGAGAGGCAAATG+AGG | - | chr1.2:29267049-29267068 | MS.gene53602:CDS | 55.0% | |
| ATCGTATGCCTGGACAGCCA+AGG | + | chr1.2:29264080-29264099 | None:intergenic | 55.0% | |
| ATGGGCCCAAGACTCACACA+AGG | + | chr1.2:29265612-29265631 | None:intergenic | 55.0% | |
| GACATATGGCCCAAGGAGAG+TGG | + | chr1.2:29265541-29265560 | None:intergenic | 55.0% | |
| GCAACAAGAAATCGCCGGAG+AGG | - | chr1.2:29267040-29267059 | MS.gene53602:CDS | 55.0% | |
| GCAGCCCTTGTGTGAGTCTT+GGG | - | chr1.2:29265604-29265623 | MS.gene53602:intron | 55.0% | |
| GCCACATCTGCAAACCCTAC+TGG | - | chr1.2:29266748-29266767 | MS.gene53602:intron | 55.0% | |
| GCCAGTAGGGTTTGCAGATG+TGG | + | chr1.2:29266752-29266771 | None:intergenic | 55.0% | |
| GCGCCTACTTCAAGTCCTGA+TGG | - | chr1.2:29264881-29264900 | MS.gene53602:intron | 55.0% | |
| GGCTGCCGAGTAAGGAAAAC+AGG | + | chr1.2:29265590-29265609 | None:intergenic | 55.0% | |
| GGCTGTCCAGGCATACGATT+TGG | - | chr1.2:29264081-29264100 | MS.gene53602:intron | 55.0% | |
| GTGCCGCAACAAGAAATCGC+CGG | - | chr1.2:29267035-29267054 | MS.gene53602:CDS | 55.0% | |
| TCTGGAAAGGAAGGCGGTAG+AGG | - | chr1.2:29264914-29264933 | MS.gene53602:intron | 55.0% | |
| TGGGCCCAAGACTCACACAA+GGG | + | chr1.2:29265611-29265630 | None:intergenic | 55.0% | |
| TGGGGTGTGTTTATGGGCCT+CGG | - | chr1.2:29266395-29266414 | MS.gene53602:intron | 55.0% | |
| TTGCCTCCTTCGGCATGTCT+CGG | - | chr1.2:29266318-29266337 | MS.gene53602:intron | 55.0% | |
| AACTGCAACAGCAGCGGCAG+TGG | - | chr1.2:29266705-29266724 | MS.gene53602:intron | 60.0% | |
| AAGGATGGAGCGTAGCCACG+AGG | + | chr1.2:29265488-29265507 | None:intergenic | 60.0% | |
| ACGACGCGGTTCTCTACCAC+CGG | + | chr1.2:29262362-29262381 | None:intergenic | 60.0% | |
| AGGATGGAGCGTAGCCACGA+GGG | + | chr1.2:29265487-29265506 | None:intergenic | 60.0% | |
| CACACAAGGGCTGCCGAGTA+AGG | + | chr1.2:29265598-29265617 | None:intergenic | 60.0% | |
| CTGCCGCTGCTGTTGCAGTT+TGG | + | chr1.2:29266705-29266724 | None:intergenic | 60.0% | |
| GGAAAGGAAGGCGGTAGAGG+AGG | - | chr1.2:29264917-29264936 | MS.gene53602:intron | 60.0% | |
| GGCAGCCCTTGTGTGAGTCT+TGG | - | chr1.2:29265603-29265622 | MS.gene53602:intron | 60.0% | |
| GGGGGGATAAAACCCCCCAA+AGG | + | chr1.2:29266450-29266469 | None:intergenic | 60.0% | |
| GTCCAAGGCACACACAACCG+AGG | + | chr1.2:29266415-29266434 | None:intergenic | 60.0% | |
| TGCCTCCTTCGGCATGTCTC+GGG | - | chr1.2:29266319-29266338 | MS.gene53602:intron | 60.0% | |
| TTCGGCATGTCTCGGGGATC+CGG | - | chr1.2:29266326-29266345 | MS.gene53602:intron | 60.0% | |
| TTTGACGAGGAGCTTCGGCG+TGG | - | chr1.2:29264688-29264707 | MS.gene53602:intron | 60.0% | |
| GCCTCCTTCGGCATGTCTCG+GGG | - | chr1.2:29266320-29266339 | MS.gene53602:intron | 65.0% | |
| GGATCCCCGAGACATGCCGA+AGG | + | chr1.2:29266327-29266346 | None:intergenic | 65.0% | |
| GGATGGAGCGTAGCCACGAG+GGG | + | chr1.2:29265486-29265505 | None:intergenic | 65.0% | |
| GGCCTCGGTTGTGTGTGCCT+TGG | - | chr1.2:29266410-29266429 | MS.gene53602:intron | 65.0% | |
| TCCCCGAGACATGCCGAAGG+AGG | + | chr1.2:29266324-29266343 | None:intergenic | 65.0% | |
| ! | GCGTAGCCACGAGGGGTGTG+AGG | + | chr1.2:29265479-29265498 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 29262352 | 29267069 | 29262352 | ID=MS.gene53602 |
| chr1.2 | mRNA | 29262352 | 29267069 | 29262352 | ID=MS.gene53602.t1;Parent=MS.gene53602 |
| chr1.2 | exon | 29267019 | 29267069 | 29267019 | ID=MS.gene53602.t1.exon1;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29267019 | 29267069 | 29267019 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| chr1.2 | exon | 29266604 | 29266637 | 29266604 | ID=MS.gene53602.t1.exon2;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29266604 | 29266637 | 29266604 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| chr1.2 | exon | 29265319 | 29265506 | 29265319 | ID=MS.gene53602.t1.exon3;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29265319 | 29265506 | 29265319 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| chr1.2 | exon | 29264712 | 29264775 | 29264712 | ID=MS.gene53602.t1.exon4;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29264712 | 29264775 | 29264712 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| chr1.2 | exon | 29264473 | 29264566 | 29264473 | ID=MS.gene53602.t1.exon5;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29264473 | 29264566 | 29264473 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| chr1.2 | exon | 29262554 | 29262740 | 29262554 | ID=MS.gene53602.t1.exon6;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29262554 | 29262740 | 29262554 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| chr1.2 | exon | 29262352 | 29262462 | 29262352 | ID=MS.gene53602.t1.exon7;Parent=MS.gene53602.t1 |
| chr1.2 | CDS | 29262352 | 29262462 | 29262352 | ID=cds.MS.gene53602.t1;Parent=MS.gene53602.t1 |
| Gene Sequence |
| Protein sequence |
