Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53831.t1 | RHN44462.1 | 71.7 | 332 | 90 | 3 | 2 | 332 | 188 | 516 | 4.00E-127 | 464.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53831.t1 | Q9SCZ4 | 38.1 | 307 | 171 | 7 | 8 | 309 | 184 | 476 | 1.5e-42 | 174.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53831.t1 | A0A396GTL6 | 71.7 | 332 | 90 | 3 | 2 | 332 | 188 | 516 | 2.9e-127 | 464.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049993 | MS.gene53831 | 0.800701 | 1.27E-48 | -1.69E-46 |
| MS.gene051544 | MS.gene53831 | 0.834903 | 2.29E-56 | -1.69E-46 |
| MS.gene052902 | MS.gene53831 | 0.845545 | 3.80E-59 | -1.69E-46 |
| MS.gene053356 | MS.gene53831 | 0.877341 | 6.79E-69 | -1.69E-46 |
| MS.gene054788 | MS.gene53831 | 0.838484 | 2.80E-57 | -1.69E-46 |
| MS.gene058378 | MS.gene53831 | 0.804087 | 2.56E-49 | -1.69E-46 |
| MS.gene058426 | MS.gene53831 | 0.824456 | 8.00E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53831.t1 | MTR_7g015550 | 70.181 | 332 | 95 | 3 | 2 | 332 | 188 | 516 | 1.37e-159 | 469 |
| MS.gene53831.t1 | MTR_7g015390 | 70.783 | 332 | 95 | 1 | 1 | 332 | 187 | 516 | 1.84e-159 | 468 |
| MS.gene53831.t1 | MTR_7g015670 | 71.726 | 336 | 89 | 4 | 1 | 332 | 186 | 519 | 2.42e-159 | 468 |
| MS.gene53831.t1 | MTR_7g015510 | 70.482 | 332 | 94 | 3 | 2 | 332 | 188 | 516 | 4.34e-159 | 467 |
| MS.gene53831.t1 | MTR_4g052290 | 68.405 | 326 | 98 | 3 | 8 | 332 | 190 | 511 | 4.30e-149 | 441 |
| MS.gene53831.t1 | MTR_7g015320 | 66.189 | 349 | 96 | 5 | 1 | 332 | 185 | 528 | 3.96e-148 | 439 |
| MS.gene53831.t1 | MTR_7g015420 | 67.267 | 333 | 103 | 4 | 1 | 332 | 180 | 507 | 1.79e-147 | 444 |
| MS.gene53831.t1 | MTR_7g015310 | 66.667 | 333 | 99 | 5 | 2 | 332 | 186 | 508 | 4.31e-145 | 431 |
| MS.gene53831.t1 | MTR_7g015230 | 67.385 | 325 | 101 | 3 | 9 | 332 | 198 | 518 | 3.81e-144 | 429 |
| MS.gene53831.t1 | MTR_7g015620 | 64.201 | 338 | 110 | 6 | 1 | 332 | 180 | 512 | 2.80e-142 | 418 |
| MS.gene53831.t1 | MTR_7g015240 | 67.568 | 333 | 97 | 4 | 1 | 332 | 183 | 505 | 3.89e-142 | 422 |
| MS.gene53831.t1 | MTR_7g015280 | 64.653 | 331 | 100 | 4 | 2 | 332 | 185 | 498 | 1.83e-140 | 419 |
| MS.gene53831.t1 | MTR_7g015250 | 58.841 | 345 | 102 | 8 | 4 | 332 | 182 | 502 | 1.22e-119 | 366 |
| MS.gene53831.t1 | MTR_6g015805 | 35.821 | 335 | 196 | 12 | 4 | 329 | 176 | 500 | 4.37e-50 | 179 |
| MS.gene53831.t1 | MTR_4g111925 | 39.007 | 282 | 147 | 9 | 8 | 278 | 184 | 451 | 3.47e-46 | 166 |
| MS.gene53831.t1 | MTR_7g073660 | 39.007 | 282 | 147 | 9 | 8 | 278 | 184 | 451 | 5.08e-46 | 167 |
| MS.gene53831.t1 | MTR_6g015795 | 38.132 | 257 | 146 | 10 | 7 | 256 | 182 | 432 | 2.28e-42 | 155 |
| MS.gene53831.t1 | MTR_5g047060 | 35.197 | 304 | 165 | 10 | 8 | 296 | 186 | 472 | 6.60e-38 | 144 |
| MS.gene53831.t1 | MTR_5g047110 | 35.099 | 302 | 168 | 9 | 8 | 296 | 185 | 471 | 1.48e-37 | 142 |
| MS.gene53831.t1 | MTR_1g080740 | 34.470 | 264 | 140 | 11 | 2 | 258 | 170 | 407 | 1.09e-35 | 137 |
| MS.gene53831.t1 | MTR_7g115300 | 32.955 | 264 | 143 | 9 | 2 | 258 | 181 | 417 | 4.29e-34 | 132 |
| MS.gene53831.t1 | MTR_5g047120 | 31.290 | 310 | 171 | 13 | 8 | 306 | 191 | 469 | 1.90e-29 | 119 |
| MS.gene53831.t1 | MTR_2g080220 | 29.874 | 318 | 189 | 11 | 4 | 319 | 167 | 452 | 1.58e-25 | 107 |
| MS.gene53831.t1 | MTR_5g047070 | 31.518 | 257 | 136 | 11 | 61 | 306 | 1 | 228 | 1.83e-23 | 101 |
| MS.gene53831.t1 | MTR_2g030310 | 28.125 | 320 | 189 | 11 | 8 | 320 | 186 | 471 | 1.29e-21 | 96.3 |
| MS.gene53831.t1 | MTR_2g030310 | 28.125 | 320 | 189 | 11 | 8 | 320 | 186 | 471 | 1.43e-21 | 96.3 |
| MS.gene53831.t1 | MTR_4g061833 | 28.013 | 307 | 188 | 10 | 4 | 307 | 20 | 296 | 5.58e-19 | 88.2 |
| MS.gene53831.t1 | MTR_4g061833 | 28.013 | 307 | 188 | 10 | 4 | 307 | 171 | 447 | 1.11e-18 | 87.4 |
| MS.gene53831.t1 | MTR_4g061930 | 28.013 | 307 | 188 | 10 | 4 | 307 | 171 | 447 | 1.11e-18 | 87.4 |
| MS.gene53831.t1 | MTR_8g037700 | 28.800 | 250 | 151 | 8 | 9 | 253 | 203 | 430 | 1.99e-18 | 86.7 |
| MS.gene53831.t1 | MTR_4g109010 | 28.425 | 292 | 177 | 11 | 8 | 292 | 194 | 460 | 3.66e-17 | 83.2 |
| MS.gene53831.t1 | MTR_8g467150 | 27.305 | 282 | 148 | 11 | 10 | 289 | 177 | 403 | 2.46e-16 | 80.5 |
| MS.gene53831.t1 | MTR_6g048090 | 27.879 | 330 | 178 | 17 | 4 | 319 | 168 | 451 | 4.42e-16 | 79.7 |
| MS.gene53831.t1 | MTR_2g096160 | 27.778 | 252 | 149 | 10 | 9 | 254 | 174 | 398 | 5.22e-14 | 73.6 |
| MS.gene53831.t1 | MTR_1g040077 | 26.545 | 275 | 168 | 14 | 53 | 314 | 164 | 417 | 3.26e-13 | 70.9 |
| MS.gene53831.t1 | MTR_1g040073 | 26.545 | 275 | 168 | 14 | 53 | 314 | 164 | 417 | 5.60e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene53831.t1 | AT3G51550 | 37.987 | 308 | 172 | 7 | 8 | 310 | 184 | 477 | 1.76e-50 | 180 |
| MS.gene53831.t1 | AT5G39000 | 36.964 | 303 | 163 | 13 | 9 | 300 | 179 | 464 | 2.52e-44 | 162 |
| MS.gene53831.t1 | AT5G39020 | 35.625 | 320 | 183 | 10 | 9 | 320 | 176 | 480 | 1.27e-42 | 157 |
| MS.gene53831.t1 | AT3G04690 | 32.298 | 322 | 180 | 14 | 8 | 319 | 175 | 468 | 7.76e-40 | 149 |
| MS.gene53831.t1 | AT5G38990 | 34.862 | 327 | 198 | 9 | 9 | 329 | 173 | 490 | 1.22e-39 | 149 |
| MS.gene53831.t1 | AT5G28680 | 31.366 | 322 | 186 | 11 | 8 | 319 | 176 | 472 | 4.24e-39 | 147 |
| MS.gene53831.t1 | AT5G28680 | 31.366 | 322 | 186 | 11 | 8 | 319 | 176 | 472 | 4.24e-39 | 147 |
| MS.gene53831.t1 | AT5G39030 | 30.816 | 331 | 197 | 11 | 4 | 320 | 164 | 476 | 1.49e-33 | 131 |
| MS.gene53831.t1 | AT5G39030 | 30.816 | 331 | 197 | 11 | 4 | 320 | 170 | 482 | 1.81e-33 | 131 |
| MS.gene53831.t1 | AT1G30570 | 28.205 | 312 | 179 | 11 | 8 | 310 | 188 | 463 | 1.16e-24 | 105 |
| MS.gene53831.t1 | AT5G54380 | 29.114 | 316 | 189 | 13 | 4 | 313 | 167 | 453 | 2.46e-22 | 98.6 |
| MS.gene53831.t1 | AT5G59700 | 27.974 | 311 | 186 | 12 | 4 | 309 | 158 | 435 | 7.50e-22 | 97.1 |
| MS.gene53831.t1 | AT4G00300 | 25.538 | 325 | 209 | 14 | 7 | 324 | 172 | 470 | 2.96e-20 | 91.7 |
| MS.gene53831.t1 | AT2G21480 | 30.364 | 247 | 148 | 8 | 9 | 253 | 200 | 424 | 7.93e-18 | 85.1 |
| MS.gene53831.t1 | AT4G39110 | 29.555 | 247 | 150 | 8 | 9 | 253 | 201 | 425 | 2.71e-17 | 83.6 |
| MS.gene53831.t1 | AT5G61350 | 27.063 | 303 | 187 | 10 | 9 | 305 | 177 | 451 | 8.35e-17 | 82.0 |
| MS.gene53831.t1 | AT3G46290 | 26.693 | 251 | 159 | 10 | 4 | 251 | 159 | 387 | 1.32e-16 | 81.3 |
| MS.gene53831.t1 | AT2G23200 | 25.460 | 326 | 166 | 14 | 9 | 319 | 180 | 443 | 5.85e-11 | 63.9 |
Find 42 sgRNAs with CRISPR-Local
Find 57 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAGTTAAGTATACACTTTC+TGG | 0.122965 | 7.4:+83928226 | None:intergenic |
| AGTGATTTCAAATGATAATT+TGG | 0.149454 | 7.4:+83928478 | None:intergenic |
| CTTTCTGGTGCAGTGTAATT+TGG | 0.155825 | 7.4:+83928241 | None:intergenic |
| ATACAGGTATGTTTCGTAAT+TGG | 0.186187 | 7.4:-83928357 | MS.gene53831:CDS |
| ATGGGAGATATAATGGGTTT+TGG | 0.274254 | 7.4:+83927803 | None:intergenic |
| GTTCATTATGCTTTCATTAA+CGG | 0.297513 | 7.4:-83928553 | MS.gene53831:CDS |
| GTGATTTCAAATGATAATTT+GGG | 0.348785 | 7.4:+83928479 | None:intergenic |
| TACAGGTATGTTTCGTAATT+GGG | 0.355748 | 7.4:-83928356 | MS.gene53831:CDS |
| CAAATGCTGATGTGATTTAC+TGG | 0.363866 | 7.4:-83928033 | MS.gene53831:CDS |
| TTTGTGACGACTCTTATCTA+TGG | 0.390930 | 7.4:+83927576 | None:intergenic |
| AAGCATAATGAACATTTGAT+TGG | 0.391835 | 7.4:+83928563 | None:intergenic |
| TATCGTGATGTTACGTTGAA+TGG | 0.404537 | 7.4:-83927878 | MS.gene53831:CDS |
| ATCTAAATCTCATATTGAAA+TGG | 0.404628 | 7.4:-83927648 | MS.gene53831:CDS |
| TATCGTGTGTGCATAGTATC+TGG | 0.414620 | 7.4:+83927899 | None:intergenic |
| TACTTAACTGCAAGAAGTTA+TGG | 0.421821 | 7.4:-83928214 | MS.gene53831:CDS |
| AATTCATAACGACAAAACTT+TGG | 0.422997 | 7.4:-83928431 | MS.gene53831:CDS |
| ACAACATAATCCTTATGAAC+AGG | 0.429030 | 7.4:+83927992 | None:intergenic |
| ATACCTGTATCATTACTTGT+TGG | 0.432515 | 7.4:+83928370 | None:intergenic |
| AGCATCTATTGTTGGAATGA+TGG | 0.437108 | 7.4:-83927693 | MS.gene53831:CDS |
| ATACTGTTTCTCCAAGTAAC+GGG | 0.443500 | 7.4:+83928321 | None:intergenic |
| CTCATGCTAGCATCTATTGT+TGG | 0.449185 | 7.4:-83927701 | MS.gene53831:CDS |
| CAGTAAATCACATCAGCATT+TGG | 0.449717 | 7.4:+83928034 | None:intergenic |
| CAAAAGATTACAATGTAACT+TGG | 0.455335 | 7.4:-83928180 | MS.gene53831:CDS |
| TCGCATGGTTCCTGTTCATA+AGG | 0.471594 | 7.4:-83928002 | MS.gene53831:CDS |
| TTTGTGTAATAGAGAAAAGA+AGG | 0.472288 | 7.4:+83928511 | None:intergenic |
| GTTCCAACAAGTAATGATAC+AGG | 0.482416 | 7.4:-83928373 | MS.gene53831:CDS |
| TTGTGACGACTCTTATCTAT+GGG | 0.493679 | 7.4:+83927577 | None:intergenic |
| GATTGGCATATCAAGAATCC+AGG | 0.523351 | 7.4:-83928100 | MS.gene53831:CDS |
| AAAACCCATTATATCTCCCA+TGG | 0.558851 | 7.4:-83927801 | MS.gene53831:CDS |
| AAGTCACTTGAGACACTAAG+TGG | 0.568622 | 7.4:+83928298 | None:intergenic |
| ATACTTTATAGAATCAATGT+TGG | 0.577641 | 7.4:-83928406 | MS.gene53831:CDS |
| GGAAGACAAAGAACGGAGGT+TGG | 0.578619 | 7.4:-83927613 | MS.gene53831:CDS |
| TTACTGGAGTGGTGCTCGCA+TGG | 0.583742 | 7.4:-83928017 | MS.gene53831:CDS |
| GATACTGTTTCTCCAAGTAA+CGG | 0.598041 | 7.4:+83928320 | None:intergenic |
| TTGAAATGGAAGCAATGTCG+TGG | 0.624408 | 7.4:-83927634 | MS.gene53831:CDS |
| ATGTCGTGGAAGACAAAGAA+CGG | 0.629191 | 7.4:-83927620 | MS.gene53831:CDS |
| ATCACTTGACTTAGACAACA+CGG | 0.649205 | 7.4:-83928461 | MS.gene53831:CDS |
| TACTGTTTCTCCAAGTAACG+GGG | 0.677122 | 7.4:+83928322 | None:intergenic |
| AAAGTCAAAGAAATACACGT+TGG | 0.685933 | 7.4:-83927753 | MS.gene53831:CDS |
| AATGATAATTTGGGTCACTG+AGG | 0.688896 | 7.4:+83928488 | None:intergenic |
| GCTGATGTGATTTACTGGAG+TGG | 0.708071 | 7.4:-83928028 | MS.gene53831:CDS |
| TCGTGGAAGACAAAGAACGG+AGG | 0.774729 | 7.4:-83927617 | MS.gene53831:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GATAAAAATAATAATCTATT+TGG | - | chr7.4:83928324-83928343 | MS.gene53831:CDS | 10.0% |
| !! | AGTGATTTCAAATGATAATT+TGG | + | chr7.4:83927682-83927701 | None:intergenic | 20.0% |
| !! | ATACTTTATAGAATCAATGT+TGG | - | chr7.4:83927751-83927770 | MS.gene53831:CDS | 20.0% |
| !! | ATCTAAATCTCATATTGAAA+TGG | - | chr7.4:83928509-83928528 | MS.gene53831:CDS | 20.0% |
| !! | GTGATTTCAAATGATAATTT+GGG | + | chr7.4:83927681-83927700 | None:intergenic | 20.0% |
| !!! | GATTTTTATTGATGATATCT+TGG | - | chr7.4:83928095-83928114 | MS.gene53831:CDS | 20.0% |
| ! | AAGCATAATGAACATTTGAT+TGG | + | chr7.4:83927597-83927616 | None:intergenic | 25.0% |
| ! | AATTCATAACGACAAAACTT+TGG | - | chr7.4:83927726-83927745 | MS.gene53831:CDS | 25.0% |
| ! | CAAAAGATTACAATGTAACT+TGG | - | chr7.4:83927977-83927996 | MS.gene53831:CDS | 25.0% |
| ! | GTTCATTATGCTTTCATTAA+CGG | - | chr7.4:83927604-83927623 | MS.gene53831:CDS | 25.0% |
| ! | TTTGTGTAATAGAGAAAAGA+AGG | + | chr7.4:83927649-83927668 | None:intergenic | 25.0% |
| !! | AGTTACATTGTAATCTTTTG+TGG | + | chr7.4:83927977-83927996 | None:intergenic | 25.0% |
| !!! | AAGTTTTGTCGTTATGAATT+TGG | + | chr7.4:83927726-83927745 | None:intergenic | 25.0% |
| !!! | TATTTCTTTGACTTTTGAGT+TGG | + | chr7.4:83928399-83928418 | None:intergenic | 25.0% |
| !!! | TGATGTTGCTTTTACTTATA+TGG | - | chr7.4:83928011-83928030 | MS.gene53831:CDS | 25.0% |
| !!! | TTGCTTTTACTTATATGGTA+AGG | - | chr7.4:83928016-83928035 | MS.gene53831:CDS | 25.0% |
| AAAGTCAAAGAAATACACGT+TGG | - | chr7.4:83928404-83928423 | MS.gene53831:CDS | 30.0% | |
| ACAACATAATCCTTATGAAC+AGG | + | chr7.4:83928168-83928187 | None:intergenic | 30.0% | |
| ATACAGGTATGTTTCGTAAT+TGG | - | chr7.4:83927800-83927819 | MS.gene53831:CDS | 30.0% | |
| ATACCTGTATCATTACTTGT+TGG | + | chr7.4:83927790-83927809 | None:intergenic | 30.0% | |
| TACAGGTATGTTTCGTAATT+GGG | - | chr7.4:83927801-83927820 | MS.gene53831:CDS | 30.0% | |
| TACTTAACTGCAAGAAGTTA+TGG | - | chr7.4:83927943-83927962 | MS.gene53831:CDS | 30.0% | |
| ! | TACATTTTTGCGAGTTTGAT+TGG | - | chr7.4:83928040-83928059 | MS.gene53831:CDS | 30.0% |
| ! | TTTTCCATGGGAGATATAAT+GGG | + | chr7.4:83928363-83928382 | None:intergenic | 30.0% |
| ! | TTTTTCCATGGGAGATATAA+TGG | + | chr7.4:83928364-83928383 | None:intergenic | 30.0% |
| !! | ATCGGTAAAACTTTTTCCAT+GGG | + | chr7.4:83928375-83928394 | None:intergenic | 30.0% |
| !! | TATCGGTAAAACTTTTTCCA+TGG | + | chr7.4:83928376-83928395 | None:intergenic | 30.0% |
| !!! | TTTGACTTTTGAGTTGGTAT+CGG | + | chr7.4:83928393-83928412 | None:intergenic | 30.0% |
| AAAACCCATTATATCTCCCA+TGG | - | chr7.4:83928356-83928375 | MS.gene53831:CDS | 35.0% | |
| AATGATAATTTGGGTCACTG+AGG | + | chr7.4:83927672-83927691 | None:intergenic | 35.0% | |
| AGCATCTATTGTTGGAATGA+TGG | - | chr7.4:83928464-83928483 | MS.gene53831:CDS | 35.0% | |
| ATCACTTGACTTAGACAACA+CGG | - | chr7.4:83927696-83927715 | MS.gene53831:CDS | 35.0% | |
| ATCTGAAAAACTCTATCACC+TGG | + | chr7.4:83928078-83928097 | None:intergenic | 35.0% | |
| CAAATGCTGATGTGATTTAC+TGG | - | chr7.4:83928124-83928143 | MS.gene53831:CDS | 35.0% | |
| CAGTAAATCACATCAGCATT+TGG | + | chr7.4:83928126-83928145 | None:intergenic | 35.0% | |
| GCAGTTAAGTATACACTTTC+TGG | + | chr7.4:83927934-83927953 | None:intergenic | 35.0% | |
| GTTCCAACAAGTAATGATAC+AGG | - | chr7.4:83927784-83927803 | MS.gene53831:CDS | 35.0% | |
| TATCGTGATGTTACGTTGAA+TGG | - | chr7.4:83928279-83928298 | MS.gene53831:CDS | 35.0% | |
| ! | ATACTGTTTCTCCAAGTAAC+GGG | + | chr7.4:83927839-83927858 | None:intergenic | 35.0% |
| ! | GATACTGTTTCTCCAAGTAA+CGG | + | chr7.4:83927840-83927859 | None:intergenic | 35.0% |
| !!! | ATGGGAGATATAATGGGTTT+TGG | + | chr7.4:83928357-83928376 | None:intergenic | 35.0% |
| !!! | CACGTTGGTTATTTTTGTTC+TGG | - | chr7.4:83928419-83928438 | MS.gene53831:CDS | 35.0% |
| AAGTCACTTGAGACACTAAG+TGG | + | chr7.4:83927862-83927881 | None:intergenic | 40.0% | |
| ATGTCGTGGAAGACAAAGAA+CGG | - | chr7.4:83928537-83928556 | MS.gene53831:CDS | 40.0% | |
| CTCATGCTAGCATCTATTGT+TGG | - | chr7.4:83928456-83928475 | MS.gene53831:CDS | 40.0% | |
| GATTGGCATATCAAGAATCC+AGG | - | chr7.4:83928057-83928076 | MS.gene53831:CDS | 40.0% | |
| GTGAGTATGAGCTCAAAAAG+AGG | - | chr7.4:83928186-83928205 | MS.gene53831:CDS | 40.0% | |
| TATCGTGTGTGCATAGTATC+TGG | + | chr7.4:83928261-83928280 | None:intergenic | 40.0% | |
| TTGAAATGGAAGCAATGTCG+TGG | - | chr7.4:83928523-83928542 | MS.gene53831:CDS | 40.0% | |
| ! | CTTTCTGGTGCAGTGTAATT+TGG | + | chr7.4:83927919-83927938 | None:intergenic | 40.0% |
| ! | TAACGATTTTCCCCGTTACT+TGG | - | chr7.4:83927825-83927844 | MS.gene53831:CDS | 40.0% |
| ! | TACTGTTTCTCCAAGTAACG+GGG | + | chr7.4:83927838-83927857 | None:intergenic | 40.0% |
| GCTGATGTGATTTACTGGAG+TGG | - | chr7.4:83928129-83928148 | MS.gene53831:CDS | 45.0% | |
| TCGCATGGTTCCTGTTCATA+AGG | - | chr7.4:83928155-83928174 | MS.gene53831:CDS | 45.0% | |
| GGAAGACAAAGAACGGAGGT+TGG | - | chr7.4:83928544-83928563 | MS.gene53831:CDS | 50.0% | |
| TCGTGGAAGACAAAGAACGG+AGG | - | chr7.4:83928540-83928559 | MS.gene53831:CDS | 50.0% | |
| TTACTGGAGTGGTGCTCGCA+TGG | - | chr7.4:83928140-83928159 | MS.gene53831:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 83927589 | 83928590 | 83927589 | ID=MS.gene53831 |
| chr7.4 | mRNA | 83927589 | 83928590 | 83927589 | ID=MS.gene53831.t1;Parent=MS.gene53831 |
| chr7.4 | exon | 83927589 | 83928590 | 83927589 | ID=MS.gene53831.t1.exon1;Parent=MS.gene53831.t1 |
| chr7.4 | CDS | 83927589 | 83928590 | 83927589 | ID=cds.MS.gene53831.t1;Parent=MS.gene53831.t1 |
| Gene Sequence |
| Protein sequence |
