AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55566


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55566.t1 MTR_6g026900 98.613 721 10 0 13 733 1 721 0.0 1487
MS.gene55566.t1 MTR_5g009520 25.121 207 144 5 266 467 113 313 5.32e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55566.t1 AT1G17760 68.176 751 192 9 13 733 1 734 0.0 1054
MS.gene55566.t1 AT5G45990 24.719 267 166 8 209 467 62 301 2.75e-11 67.4
MS.gene55566.t1 AT5G45990 24.719 267 166 8 209 467 72 311 3.05e-11 67.4

Find 149 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTGCCGGCTCGAGCTTTC+TGG 0.178155 6.2:+18240293 None:intergenic
CACTTCCTCAAGACGCTTTC+CGG 0.191888 6.2:-18240327 MS.gene55566:CDS
TCATATGGAAGCGCACTTTC+TGG 0.232790 6.2:-18240250 MS.gene55566:CDS
GCCCTCGCACTATTATATTT+TGG 0.234679 6.2:+18246372 None:intergenic
GTTAAGTTTGAGCAAACTTA+TGG 0.243038 6.2:-18242885 MS.gene55566:CDS
GAAAATATACGAAAACCTTT+TGG 0.265371 6.2:-18244299 MS.gene55566:CDS
GAGAAGTCTATTATGCTTAA+TGG 0.271725 6.2:-18242135 MS.gene55566:CDS
CCTGCTACAAGTGAACTTTC+TGG 0.280289 6.2:-18240958 MS.gene55566:CDS
CTGTTTGTTGAATTGTCTTC+AGG 0.282381 6.2:-18248722 MS.gene55566:CDS
CAGAAATTTGCTTGCCTTGT+GGG 0.285058 6.2:+18246278 None:intergenic
GGAATCCCGTGGAGCAATTC+AGG 0.310644 6.2:-18244864 MS.gene55566:intron
AGCTGCTAGGAAGTACTTTC+TGG 0.311993 6.2:-18243927 MS.gene55566:CDS
ATCAACATCTTTGAAGTATC+AGG 0.324206 6.2:+18241975 None:intergenic
TACAAACTGGTACCTCTTGC+CGG 0.334966 6.2:+18242326 None:intergenic
TCCGATGTGTTTCTTCTTGT+GGG 0.336415 6.2:+18246621 None:intergenic
CACGAAATATTACCAACTTC+TGG 0.351260 6.2:+18246498 None:intergenic
CACATCACATTGAACAACTT+TGG 0.356399 6.2:-18246553 MS.gene55566:CDS
GATATAGTTTCATGGATCTA+TGG 0.361978 6.2:-18242381 MS.gene55566:CDS
TACATACCTGGATTATGCTT+TGG 0.368172 6.2:+18241945 None:intergenic
TGAGATAAGCCACTTTGAAC+AGG 0.369484 6.2:+18240919 None:intergenic
AACTCACTCAAGAATATAAA+CGG 0.372963 6.2:+18243612 None:intergenic
CACATACTGCTTCCAAAACT+TGG 0.383591 6.2:+18248798 None:intergenic
TGCAGAAGCTGCTCGTATAT+TGG 0.384141 6.2:+18248989 None:intergenic
CAAACAGGATCAGTTTCATA+TGG 0.389990 6.2:-18240265 MS.gene55566:CDS
AGTAAATATAACTCGTTTGT+TGG 0.390799 6.2:+18245471 None:intergenic
GAAAGCTACACCACCTGCTT+TGG 0.398442 6.2:-18241483 MS.gene55566:CDS
AGCCTTTCTAAAGTCATTGC+CGG 0.398907 6.2:-18246743 MS.gene55566:intron
TGTATCACGATATAGTTTCA+TGG 0.404007 6.2:-18242389 MS.gene55566:CDS
TTACATTCGTTTCATTAGAA+AGG 0.412653 6.2:-18247846 MS.gene55566:CDS
ATGCTTGCTGTACCACCAAC+TGG 0.416506 6.2:-18246303 MS.gene55566:CDS
CATACCATACATCAGGATAA+TGG 0.423357 6.2:+18245195 None:intergenic
TTAAGTTTGAGCAAACTTAT+GGG 0.423751 6.2:-18242884 MS.gene55566:CDS
CTTTCTGGAACTGTCGTATC+CGG 0.425032 6.2:+18240308 None:intergenic
GCCGGCAGCACTTCACAAAC+AGG 0.436930 6.2:-18240280 MS.gene55566:CDS
TGTACCATTATCCTGATGTA+TGG 0.438544 6.2:-18245199 MS.gene55566:CDS
TTTGTGTCCAGGCCAAGTTT+TGG 0.439393 6.2:-18248810 MS.gene55566:intron
GCAAACCTACCTTCAGTTGA+CGG 0.442220 6.2:-18241449 MS.gene55566:intron
ATCCGATGTGTTTCTTCTTG+TGG 0.442316 6.2:+18246620 None:intergenic
TTCACTTGTAGGTTTGGAAA+AGG 0.443294 6.2:-18242911 MS.gene55566:intron
TTTCCCGTATTGCTTTCTAC+CGG 0.444340 6.2:+18240888 None:intergenic
ACGGGACAAAGTGGTAAAAC+TGG 0.444839 6.2:-18241012 MS.gene55566:CDS
ATTTAGTATCATCTTCCTCT+TGG 0.448088 6.2:+18240365 None:intergenic
CATTGTCACTGTCTCCCAAA+AGG 0.449879 6.2:+18244284 None:intergenic
GCACTTTCTGGCGATTTATC+CGG 0.449993 6.2:-18240238 MS.gene55566:CDS
ACAATAACACTTACAGCTGT+TGG 0.450659 6.2:+18248959 None:intergenic
AGGTCTCTGAAGGCTCTTCC+TGG 0.450859 6.2:-18245113 MS.gene55566:intron
TAGAAAGGTTAATGATAAGA+AGG 0.454228 6.2:-18247831 MS.gene55566:CDS
GGCGATTTATCCGGCAGCAC+TGG 0.454825 6.2:-18240229 MS.gene55566:CDS
GATAGCACAATATCCACATT+TGG 0.455138 6.2:+18241060 None:intergenic
GGGATCTTTGTCAAGACAAA+AGG 0.458139 6.2:+18243847 None:intergenic
ATTGTCTTCAGGTTCCTCTC+TGG 0.459355 6.2:-18248711 MS.gene55566:intron
GAATTTATGCTCAGCTATGT+TGG 0.465240 6.2:-18247773 MS.gene55566:intron
TTCGCAGGGACAGGTGCTGC+TGG 0.466805 6.2:-18241530 MS.gene55566:intron
GGATCTTGCTAGCATGCTTA+AGG 0.473871 6.2:-18242862 MS.gene55566:intron
TGTCGAATCCGCTGAAAAGT+TGG 0.474247 6.2:-18250155 MS.gene55566:CDS
TTCCCGTATTGCTTTCTACC+GGG 0.479448 6.2:+18240889 None:intergenic
CGGAAAGCGTCTTGAGGAAG+TGG 0.482528 6.2:+18240328 None:intergenic
AGTTCACTTGTAGCAGGAGC+AGG 0.487025 6.2:+18240964 None:intergenic
AGTTATATTTACTTATGAGC+AGG 0.490083 6.2:-18245461 MS.gene55566:intron
GTAGCAGGAGCAGGACCTAC+TGG 0.493749 6.2:+18240973 None:intergenic
GTAGAAAGCAATACGGGAAA+AGG 0.494955 6.2:-18240885 MS.gene55566:CDS
AGCATCAGGCCCTGTGTGGA+TGG 0.495690 6.2:-18246773 MS.gene55566:CDS
ATATGTAGGTTGAGCAAAGA+AGG 0.497802 6.2:-18242468 MS.gene55566:intron
TCCTGTTTGTGAAGTGCTGC+CGG 0.502274 6.2:+18240279 None:intergenic
GCATAATCATACCATACATC+AGG 0.502464 6.2:+18245188 None:intergenic
ACTCACTCAAGAATATAAAC+GGG 0.506129 6.2:+18243613 None:intergenic
TTACAGAGCGACCTTCCAAC+GGG 0.507023 6.2:-18241030 MS.gene55566:CDS
GTTATATCAACCAGTGCTGC+CGG 0.514917 6.2:+18240219 None:intergenic
AAAGTTGGCTAATGAAGCTC+AGG 0.515124 6.2:-18250140 MS.gene55566:intron
CAAAGAAGGAAAGAAGCGTT+TGG 0.515620 6.2:-18242454 MS.gene55566:CDS
GCCTTGTGGGATCCAGTTGG+TGG 0.515759 6.2:+18246291 None:intergenic
TACCACTTTGTCCCGTTGGA+AGG 0.517821 6.2:+18241019 None:intergenic
TAGACATGATATGTACAAGA+TGG 0.519730 6.2:+18243890 None:intergenic
TCCTCTAGAGGATTCAGTTG+AGG 0.520038 6.2:-18243231 MS.gene55566:intron
TATTTCAACTACATCTTCAA+AGG 0.524522 6.2:-18242006 MS.gene55566:CDS
GCTACATGGCATGCTAAAGC+TGG 0.525953 6.2:-18245167 MS.gene55566:CDS
AGACATGATATGTACAAGAT+GGG 0.529356 6.2:+18243891 None:intergenic
AGAAAGGTTAATGATAAGAA+GGG 0.532915 6.2:-18247830 MS.gene55566:CDS
ACAGGATCAGACATAGCATC+AGG 0.533541 6.2:-18246787 MS.gene55566:intron
TTGTCTTGACAAAGATCCCA+AGG 0.534450 6.2:-18243843 MS.gene55566:intron
ACAAACTGGTACCTCTTGCC+GGG 0.540167 6.2:+18242327 None:intergenic
CCAGAAAGTTCACTTGTAGC+AGG 0.540677 6.2:+18240958 None:intergenic
AACCGGCAATGACTTTAGAA+AGG 0.541989 6.2:+18246741 None:intergenic
AAGTTCTGTTAGCCAGAAGT+TGG 0.544913 6.2:-18246510 MS.gene55566:intron
ATTGAGTTCACTTCCTCTAG+AGG 0.546234 6.2:-18243243 MS.gene55566:CDS
CTTGCCTTGTGGGATCCAGT+TGG 0.550471 6.2:+18246288 None:intergenic
TAGGAGTAATAATAGCCCTC+TGG 0.557030 6.2:+18246576 None:intergenic
TATGATCCAAAGCATAATCC+AGG 0.559022 6.2:-18241951 MS.gene55566:intron
GCAGTATGTGGAGGCACACA+TGG 0.560072 6.2:-18248785 MS.gene55566:CDS
AAATATAACTCGTTTGTTGG+AGG 0.561833 6.2:+18245474 None:intergenic
CAACCCGGTAGAAAGCAATA+CGG 0.562816 6.2:-18240892 MS.gene55566:CDS
GGACCTACTGGCAATTGTGA+TGG 0.562936 6.2:+18240985 None:intergenic
CGAGGGCAGTATACAGAGAA+CGG 0.564609 6.2:-18246356 MS.gene55566:CDS
ACAATATCCACATTTGGTGT+TGG 0.568076 6.2:+18241066 None:intergenic
AACCCGGTAGAAAGCAATAC+GGG 0.568599 6.2:-18240891 MS.gene55566:CDS
TGCAGGTCCAACACCAAATG+TGG 0.571426 6.2:-18241073 MS.gene55566:intron
AAGCGTCTTGAGGAAGTGGT+TGG 0.574232 6.2:+18240332 None:intergenic
TAATACCTGAATTGCTCCAC+GGG 0.574460 6.2:+18244859 None:intergenic
CTGCAATCAAAGTATTTCAA+AGG 0.574741 6.2:-18245133 MS.gene55566:CDS
AACCAAAATATAATAGTGCG+AGG 0.577133 6.2:-18246374 MS.gene55566:CDS
AAGAAATGCAGTGGATGGCA+TGG 0.577479 6.2:-18245822 MS.gene55566:CDS
AGTATTTCAAAGGTCTCTGA+AGG 0.578380 6.2:-18245123 MS.gene55566:CDS
GAAAGGTTAATGATAAGAAG+GGG 0.579902 6.2:-18247829 MS.gene55566:CDS
CTGAAGGTGTTGAAGCTGCT+AGG 0.582458 6.2:-18243940 MS.gene55566:CDS
CGTATCCGGAAAGCGTCTTG+AGG 0.583811 6.2:+18240322 None:intergenic
CAGTTCCAGAAAGCTCGAGC+CGG 0.586394 6.2:-18240298 MS.gene55566:CDS
CTATGTGGCTTACGCGTCAG+TGG 0.587294 6.2:-18243870 MS.gene55566:CDS
TAAGTTTGAGCAAACTTATG+GGG 0.588290 6.2:-18242883 MS.gene55566:CDS
GGCTTATCTCACAAGCAACC+CGG 0.588513 6.2:-18240907 MS.gene55566:CDS
TTTACAGAGCGACCTTCCAA+CGG 0.590971 6.2:-18241031 MS.gene55566:CDS
TATACGTGCTTTATTCGAGA+GGG 0.597091 6.2:-18243267 MS.gene55566:CDS
ACAGGAAGAAATGCAGTGGA+TGG 0.598108 6.2:-18245827 MS.gene55566:intron
TGATAATTTATCCCGGCAAG+AGG 0.598970 6.2:-18242338 MS.gene55566:intron
AATTACCGTCAACTGAAGGT+AGG 0.599943 6.2:+18241444 None:intergenic
GAGATAAGCCACTTTGAACA+GGG 0.604566 6.2:+18240920 None:intergenic
AAGTCTCACCCTGTTCAAAG+TGG 0.606342 6.2:-18240928 MS.gene55566:CDS
TTGTACATATCATGTCTATG+TGG 0.608793 6.2:-18243885 MS.gene55566:CDS
GTAATACCTGAATTGCTCCA+CGG 0.609238 6.2:+18244858 None:intergenic
TGAAAATTACCGTCAACTGA+AGG 0.609478 6.2:+18241440 None:intergenic
TCAAGATCGTTCGAAGAGCA+CGG 0.611562 6.2:+18242358 None:intergenic
ACGATCTTGATAATTTATCC+CGG 0.615968 6.2:-18242345 MS.gene55566:CDS
ATATACGTGCTTTATTCGAG+AGG 0.625732 6.2:-18243268 MS.gene55566:CDS
ATATGCTTATGCAGAGCTAG+AGG 0.626295 6.2:-18244885 MS.gene55566:CDS
GCTATGTACTCCATCCACAC+AGG 0.627247 6.2:+18246763 None:intergenic
GACCTTCCAACGGGACAAAG+TGG 0.627349 6.2:-18241021 MS.gene55566:CDS
AAGCTGCTCGTATATTGGTG+TGG 0.629883 6.2:+18248994 None:intergenic
ACCAAAATATAATAGTGCGA+GGG 0.630534 6.2:-18246373 MS.gene55566:CDS
AGTTGTTCAATGTGATGTGT+AGG 0.630764 6.2:+18246557 None:intergenic
AAAGGTTAATGATAAGAAGG+GGG 0.633601 6.2:-18247828 MS.gene55566:CDS
CTATGTACTCCATCCACACA+GGG 0.637483 6.2:+18246764 None:intergenic
ACCACCAACTGGATCCCACA+AGG 0.642757 6.2:-18246292 MS.gene55566:intron
ACATAGCATCAGGCCCTGTG+TGG 0.645875 6.2:-18246777 MS.gene55566:CDS
TCTGACAGGAAGAAATGCAG+TGG 0.647012 6.2:-18245831 MS.gene55566:intron
ATAATAATGTTCAGGCCAAG+AGG 0.649307 6.2:-18240380 MS.gene55566:intron
GACATGATATGTACAAGATG+GGG 0.653987 6.2:+18243892 None:intergenic
TTGTGAGGAAAGTCTACCAG+AGG 0.655102 6.2:-18246592 MS.gene55566:CDS
ACCTCAACTGAATCCTCTAG+AGG 0.658815 6.2:+18243230 None:intergenic
ATTCCATCACAATTGCCAGT+AGG 0.663778 6.2:-18240988 MS.gene55566:CDS
GTAGTTGAAATACTTGCAGT+CGG 0.664432 6.2:+18242017 None:intergenic
GAAGCAATGTCTATTCTCTG+TGG 0.670370 6.2:+18245496 None:intergenic
TATGGTATGATTATGCTACA+TGG 0.677015 6.2:-18245181 MS.gene55566:CDS
TGTGGCTTCTGCAATAGACA+AGG 0.679624 6.2:+18249012 None:intergenic
CACATCGGATGACTGTTGTG+AGG 0.682292 6.2:-18246607 MS.gene55566:CDS
TGGTACTGAAAAGAAAACAA+TGG 0.692247 6.2:-18250191 MS.gene55566:CDS
TGTGAGGAAAGTCTACCAGA+GGG 0.698856 6.2:-18246591 MS.gene55566:CDS
GCAGAGCTAGAGGAATCCCG+TGG 0.700291 6.2:-18244875 MS.gene55566:CDS
AAGAGAACAACGTACCAGAG+AGG 0.701521 6.2:+18248697 None:intergenic
GAAGACAATTCAACAAACAG+CGG 0.704193 6.2:+18248725 None:intergenic
ACCCACAAGAAGAAACACAT+CGG 0.717171 6.2:-18246622 MS.gene55566:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr6.2 gene 18240225 18250329 18240225 ID=MS.gene55566
chr6.2 mRNA 18240225 18250329 18240225 ID=MS.gene55566.t1;Parent=MS.gene55566
chr6.2 exon 18250327 18250329 18250327 ID=MS.gene55566.t1.exon1;Parent=MS.gene55566.t1
chr6.2 CDS 18250327 18250329 18250327 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18250141 18250227 18250141 ID=MS.gene55566.t1.exon2;Parent=MS.gene55566.t1
chr6.2 CDS 18250141 18250227 18250141 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18248973 18249035 18248973 ID=MS.gene55566.t1.exon3;Parent=MS.gene55566.t1
chr6.2 CDS 18248973 18249035 18248973 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18248712 18248821 18248712 ID=MS.gene55566.t1.exon4;Parent=MS.gene55566.t1
chr6.2 CDS 18248712 18248821 18248712 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18247774 18247874 18247774 ID=MS.gene55566.t1.exon5;Parent=MS.gene55566.t1
chr6.2 CDS 18247774 18247874 18247774 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18246744 18246805 18246744 ID=MS.gene55566.t1.exon6;Parent=MS.gene55566.t1
chr6.2 CDS 18246744 18246805 18246744 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18246511 18246651 18246511 ID=MS.gene55566.t1.exon7;Parent=MS.gene55566.t1
chr6.2 CDS 18246511 18246651 18246511 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18246293 18246421 18246293 ID=MS.gene55566.t1.exon8;Parent=MS.gene55566.t1
chr6.2 CDS 18246293 18246421 18246293 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18245799 18245845 18245799 ID=MS.gene55566.t1.exon9;Parent=MS.gene55566.t1
chr6.2 CDS 18245799 18245845 18245799 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18245462 18245525 18245462 ID=MS.gene55566.t1.exon10;Parent=MS.gene55566.t1
chr6.2 CDS 18245462 18245525 18245462 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18245114 18245234 18245114 ID=MS.gene55566.t1.exon11;Parent=MS.gene55566.t1
chr6.2 CDS 18245114 18245234 18245114 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18244865 18244923 18244865 ID=MS.gene55566.t1.exon12;Parent=MS.gene55566.t1
chr6.2 CDS 18244865 18244923 18244865 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18244261 18244329 18244261 ID=MS.gene55566.t1.exon13;Parent=MS.gene55566.t1
chr6.2 CDS 18244261 18244329 18244261 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18243844 18243984 18243844 ID=MS.gene55566.t1.exon14;Parent=MS.gene55566.t1
chr6.2 CDS 18243844 18243984 18243844 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18243619 18243683 18243619 ID=MS.gene55566.t1.exon15;Parent=MS.gene55566.t1
chr6.2 CDS 18243619 18243683 18243619 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18243232 18243328 18243232 ID=MS.gene55566.t1.exon16;Parent=MS.gene55566.t1
chr6.2 CDS 18243232 18243328 18243232 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18242863 18242922 18242863 ID=MS.gene55566.t1.exon17;Parent=MS.gene55566.t1
chr6.2 CDS 18242863 18242922 18242863 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18242339 18242482 18242339 ID=MS.gene55566.t1.exon18;Parent=MS.gene55566.t1
chr6.2 CDS 18242339 18242482 18242339 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18242121 18242184 18242121 ID=MS.gene55566.t1.exon19;Parent=MS.gene55566.t1
chr6.2 CDS 18242121 18242184 18242121 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18241952 18242047 18241952 ID=MS.gene55566.t1.exon20;Parent=MS.gene55566.t1
chr6.2 CDS 18241952 18242047 18241952 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18241450 18241545 18241450 ID=MS.gene55566.t1.exon21;Parent=MS.gene55566.t1
chr6.2 CDS 18241450 18241545 18241450 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18240872 18241090 18240872 ID=MS.gene55566.t1.exon22;Parent=MS.gene55566.t1
chr6.2 CDS 18240872 18241090 18240872 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
chr6.2 exon 18240225 18240388 18240225 ID=MS.gene55566.t1.exon23;Parent=MS.gene55566.t1
chr6.2 CDS 18240225 18240388 18240225 ID=cds.MS.gene55566.t1;Parent=MS.gene55566.t1
Gene Sequence

>MS.gene55566

ATGGTATAATTGTTCTTCGTTTTCGCTTGTTCTTCTTGATTCGATTTTCACAACAAAATAAAAAAATTGATCTTTTTGTGTTTTTTTTTTAATGTTTTTTAGGATAAAACCGGTGGTGGTACTGAAAAGAAAACAATGGTCGATAAGTATAATGTCGAATCCGCTGAAAAGTTGGCTAATGAAGCTCAGGTGAAAAACCCAGTTCTAAAGTTTTGATCTTTTTTTGTTTTTCTTTTCAAATTCTTTGACCCTTTTGTTTTTTTTATTGATAATTCATGTTTGTTGGAGCAAAAGATATCAATGTGATAATCTATTTCTAAGCTTATCATGATAAACCCTTATGTATAACTATAAGCTCTTTGTCTATTGTTGAGGTCAAACTTAAACCCTGTTTGGATAAACAACTTATCATTATAAGTGCTCATGTATAAGCTTTTTCTATATCAAAAGATAAAATAAAGTTAAATTATTTTCGTATAAGCTGGAAGCTGTTTTCATAAGCTATCTTAGAGAATTTATGAAGATAAGCTGAAAACAGCTTATTGACAATGACATAAGCTATTTTCATAAGTTCTCTCAAACAGTCTCACAAAATTAGATAAGCTCGAATAAGCCAATCCAAACATACCCCTATATATACAAGTGTTGTTAAATAGTGGTGCTATAACACCATTGTCGTGCAATACACGTGATTTTGTACAACGTGTTGTCAAATAGCGGCTATAGTAGGTTTTGACCCGGTTTCCAAGTTTTAACTTTTTGTAGAGGGGCACACCTGTATTATATATTAGTGTTGTCGAATTGTGGCAATATAAGACTATAGTGCAGTGGAATTTAACAAACAACTATTGTTCTGCAATAAGCAATTTAGTACAACTCGTTGTCAAATAATGGCTATGTCGGTGCGAAAGTACTGTAGCATCGTCGGAATTTTATGAAACCGCTATTGTTTTGTGCATACACAATTTAGTATAAAATGTTCTTAAATTGCGGTAATAGTAGCGGTATAGCACTGTAGTGTAGTGGAATTTGAACAAACTGCTATTTTCCGCGAATGACAACACTGATATTTACTACTAGTTTCTGTTTTTGTTTGTTTCTAACTTTTTGCAATTCTTTGACCCTTTTGTTTATATTGCTCATTGATGTTGTTTCTCAGTTGTTTAGCATTTGTTTTTCACAGTGGCAACAGCCGTATGTACTAGCAGCTTCTGTTTTTGTTTCCAAATATGTAATTCTTTGACCCTTTGTTCATTTTGCTCATTGACGATGTTGTTTCTCTGTTGTTGTTTAGGCCTTGTCTATTGCAGAAGCCACACCAATATACGAGCAGCTTCTGCAGTTATTTCCAACAGCTGTAAGTGTTATTGTTCGGTGCTTTAGTTGTGTGCAGAAGAAATATGTGATTTTGCGTGTGTTTTATAGTAAACTACTTCTGTGAGTGATTTTGGAAGGCTCTACTATTATGGAACTGATTTTTTATGATGCTTATTTGGTTTTGTGTCCAGGCCAAGTTTTGGAAGCAGTATGTGGAGGCACACATGGCTGTAAATAATGATGATGCTATCAAACAGATTTTTAGCCGCTGTTTGTTGAATTGTCTTCAGGTTCCTCTCTGGTACGTTGTTCTCTTAATCTTATTATGGCAATGGTTGATGTATTAGTTTCTTTTACTCCCTTTTGGTTTTGTTGTTTGAAAGGTTTTGGTTTTATGAGAGAACTCAATGTAGAGCGTAGAATGACACAGATTGGACTGTCTATTTCTTGTGTATTTAAGGCCTATGCTAATAAGAAATAGTCTATGCTTTACTGTTGGTCGGTCGCCAAGAAGGATGGCGTAGTAGATCTATCTAACATGGAAACTTCCTCTAGGGGTATGGACGGAGAGGTTTATGATGGAATCATGGAATGTTATTGTCGTCAAATAGAAGTTATAGTAGCACTGTCGTGTAACATAATTTAAACATCGCGAAACATTATTTAGTATAACGCGTTGTCATAGCGGCGCTGTAACACTGTAGTGTAGCAGAAGTTGAACAAATTGTTAATTTCTGCGATAGGCAGAACCCGATGCAAGCCTACTGCAGTTGTAAATATAAGTACCTGTTCAACCAAAATGAGTAAACTTATTGTCAATTTGGTATATTAAAGTTAAGTTGGCCTTCCCCAAATGTTATCATTAGAAGATCTTGAAAGATATTTGGTTTTTCGGCAAGTGATCTGAAATTATTGTACTTTAGTTGTTTCTTTCTTTTTCCTGGCAGAATTTCTATTGTTTGTTATATTCTGTTCCATATTCTCCTGTCTACATAATGTTTTATTTGGAATTTTCAATAATTTTTTTCTTCATATAATTATGGATCAAATACCTGCTTATTAGTTCTGTCTTGTGGTATATGCAAACAATGTTTTTGTTTTAATGTTTCAACTTGTGTTTTTTTCTTCTGGCTTATAGGCGGTGTTACATTCGTTTCATTAGAAAGGTTAATGATAAGAAGGGGGCAGAGGGTCAAGAAGAGACAAAAAAAGCTTTTGAATTTATGCTCAGCTATGTTGGTAAGTTGTTTACCATTGTCCTATTAGTTGTGTATTTCAGTTTTCTTTGAATTGTTGTAGCACCTAAGTGGGTTCGGTCATGTGAGAAAAATTCTAATAGAGTCTTTTGTGAGAGGAAGAGTTCTTGGGACTCGATATGAAAACTGTGTAAACAGTCTCTACTGTAGAAGGGGGATCCCTTGGAGGAGAGTTTCACTCTCATTCTTTCATATTTTCTGAATAAAAGTGTTCGTATTATTCAATCCAATTTCCGTGTTCCTAACAGGTCCGCCTTTGCATTTTTAAGCTTTGAGCCCAAGAGGCTCTTATTTTTAGATATAAAACCATTGATGTTCCACGCTTTGAGCCCAAGAGGCTCTTATTTAAGTATTAGATATAAAACCATTGATGTTCCACCAACGACAAAATTTTTTGGAATAGTTAGTTCATGATAGAGCCGGCAGCGACTGATCCATGTGGCCGACTACACATTGTGCGAAGGTTCCAATGCTGTTCTTGAATGTATTGGAAGAACTCTTTGTCCCTTTAGCGCCTTTTTACTGAATGTAGAGTCCTTTTAGAGTCCTATTGAATGAGGAGCAGTCAACATGGAAATATACTAATTTCAAAGAGATAGATTGAAGTAAAACCGGTCTGATTTAGGCACAGGGGGCTATTAGGAAATTGCATTAGTTTGAGTTTTAACCTCGAAAACAGAAACTGATTCCGTTTTTTGTTAGGAGAATTTTTCTCTCGCTAAACATATGATATAATTTTATCCTTTTTATATGTTATTTGATTGGGGCATTCATCATTTGTTGAATCTAGTCATCAGTGACTTTCAATTTTTCTGACTAACACAAGTCAACTCTTATTTTTGTTAATTTTGCGCTTCTTAGTTTATGCGGAGATTAATTACTTGTGTGCGTGTATATGCATGTATCTCTGTACGTATGTATTGATACATTTTTCCAATGATGTGCTAACAGGATCAGACATAGCATCAGGCCCTGTGTGGATGGAGTACATAGCCTTTCTAAAGTCATTGCCGGTTAGTTAATCTTTTGTGTGTTATGCAATTCTCATTTCTTGGTGCATAATTTGGTATCACTTTTCAAAATTTTGGGTCGATTACAATTGCAGGCTGCACACCCACAAGAAGAAACACATCGGATGACTGTTGTGAGGAAAGTCTACCAGAGGGCTATTATTACTCCTACACATCACATTGAACAACTTTGGAAAGACTATGATAGTTTTGAAAGTTCTGTTAGCCAGAAGTTGGTAATATTTCGTGCTTGATCTGATAATATGTATTTGTGATTCTGTAGTTTCTATTAAGGCCTACATTTTGATGATAAGGTGTTTTGCAGGCTAAAGGACTGATATCCGAATATCAACCAAAATATAATAGTGCGAGGGCAGTATACAGAGAACGGAAGAAGTTTTTCGATGAAATTGATTGGAATATGCTTGCTGTACCACCAACTGGATCCCACAAGGCAAGCAAATTTCTGTTCCTCTGCAAATATTGGTTATCGTTGCTATCAGTTTCTGTTAACAAATTGTTTTGGAAAGATAATCATTTTCCTCCGAAATCTCTCTAAAGAGGGTTTTTGGCTCCAATATAAGCAAAATTCAAACATGTACCAAATATCCAAAAACTTCAGCAGTTGGTACGTGGGCGATTTTATGCTTTTTAACATATCTAACACACACTCTCACGTAAGAGTTCATTGGATTTGAAGAAGCCAACTGTTGTAAAATATAATTTTAATTAGAAGAATAACCGGTGTTGAGTATCGAACTTTAGACCACCTAGTCATAGAGGCTCCAATATCCTATTATGAGCAACTATATTAAAAAATGTTACGATGTTAGATGCACGAATTATTAGTTATTTATATATCTTACATCATGATAAGTTTCGTGTTTGTTTCTTCTGACAGGAAGAAATGCAGTGGATGGCATGGAAGAAACTTCTGTCTTTTGAAAAGTAAGAAGCTTGCATCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAATTTAACTTTTTTCTTTAAGTTTAACTGTTGACATGGATCGAGATTAACCCTCAACCTGAGCCAAACCGATCTGTAGCCACCCCTGAAGCTTTTGGGAGAGTTGATGTTTGACCTAACTTATCGTTTTGAAATGCTTGCTAGATGAATCTAGTACCTTCCTCTCATAGATTTATCTAACGATGTTTACTTAACATTTGGTATTCAACCATTCTTTGTTTCAGAGGAAATCCACAGAGAATAGACATTGCTTCCTCCAACAAACGAGTTATATTTACTTATGAGCAGGTAATAGGAAAATATTTTTTCTTTCCTTTTATCCTTTAAACAGTATCAATTTTTCAATATGTAGACAAAATTACGTTTGTGTAAACTATTTCTGAAGAGAATCATATCTTATCACCTACTTGAACTCTTAATCAGGATTAGGAACGCCATTATCCATGTCTTTTTCTGCGGTGATATTTATTTATTATATTATTTATGGAATTTCTTACTGCATTTTACTGGTATAGTGTCTGATGTATTTGTACCATTATCCTGATGTATGGTATGATTATGCTACATGGCATGCTAAAGCTGGTTCGATAGATGCTGCAATCAAAGTATTTCAAAGGTCTCTGAAGGCTCTTCCTGGTAAGTGGCACTTCTGCTTACTTTTTTCATATTGTTGTTAGTGCCTATATCGTTTTTATTCACAACATTTTCTCGAGTCTCTATGTGAAAACCTTCTCTTGTATTAGCTTGTCTTAATGACACATTAACGTTTCTTCACCTCACATTTTTTACCTTTATTTAATTGCTCTGTCATTTCATTTGTGAATAGATTCGGAAATGCTACGATATGCTTATGCAGAGCTAGAGGAATCCCGTGGAGCAATTCAGGTATTACCAAATGGATATATGAAATGGAAACTATAGTCATTTATATTATTGGGAGTTGTGGGATTTTTTAATGTATTATCAGGAAATTGTTTAATTTTTACTATTCTTCGTATATGTAAAATGCATTTTTTTTTTAGTATCAATGATACTTGGTACTCCCACTTAAGTAGTTCGTTGAAACCTCTCCTAAATCTTTTCTAGTTTCTTCTTAATTTGGTTTTAGAGCGGGCTTGATCTTGCTTCTGCTCTCAATATCTGGGTTCTGCCATCTGTTGAGGCAGGGTTTAAATCTGTTAATAGTCTGCCAGTTGTGTCTCTAAAATCTAATCTAGTACCTTCATGGAAAAGTCTATCTTTTTTAGGAATGTATATGTTTGGAGGCATAATAATTTTTTTGGCTTAATCATACTTTGGATCTAGTAAAAGGCGCCCATATGTGTCATATGATATCTTACTCATTTTTTTTAGTCCTGTCTTCATTGGTTATTTTAATCCTTAAGGAGTTCTTATTCGTTGTTTTCTTGTTTTGTTTCAGGCTGCAAAGAAAATATACGAAAACCTTTTGGGAGACAGTGACAATGCAACTGCACTTGCACATATTCAAGTATGTCAAATAGTTTGTTTAATATGCTCATCATTCGTAGTGTTTCAATACTTTTCAAAATCAGTAAATATACTGCTGCATGGCGTGGTCCGAAATTTAAATGTTTTACTTGTTCAAAACTCATTAATGGAAGATTGTATATGCGTAAAACACGTTTTTTTTTGCCCTCTGCCATTATTTTTCTTTAACGAGAGCGTTCAGTAATTTATGCAGTTTATTGTAATGATTGTTGTTAGATTTCCATGCAAAAGATTTGACATCTGTTTCATGCTACAGTTCATTCGTTTTCTAAGAAGAACTGAAGGTGTTGAAGCTGCTAGGAAGTACTTTCTGGATGCTCGCAAATCCCCATCTTGTACATATCATGTCTATGTGGCTTACGCGTCAGTGGCCTTTTGTCTTGACAAAGATCCCAAGGTCTTACTATTTCCTTTTTTTGTGCATATTGTTATTGCATTTGAGTCTCAGAATGAATTAAAATATGGGAACATTGCCTACTATTGTGTTTCTTGCTTGTTATTTTAAGCACTGGAGTCTCGTTTTAACGTCTAGAAAATAATTCGGATTATCCATGCAGATGGCTCATAATGTTTTCGAAGCAGGATTAAAACACTTTATGCACGAGCCCGTTTATATTCTTGAGTGAGTTCTACTTTCTCCCATCTCTGATTAATCCTGTTTTCCCTTGCTTTCTTAATGTATTATGCCAATATTGGAGTATGCAAACAGCTCCATTACATGCATTCGGGGGTTGATAGTGTGACATGCCTGTTTCCTCTAGTTTTTAAATCTTATACTGCTTATTTTTAACTTTACGTTTTGTAGGATACATTATCCTCGCACAAGTTATACTTTTCTTCATTCCTCTTAACAATAATTCTTTTTCAATGGAAAAAACAGTGATTGAATATTTAATAATAATTTTTTTTCAGATATGCTGATTTCTTGATACGTTTGAATGATGATCAAAATATACGTGCTTTATTCGAGAGGGCATTGAGTTCACTTCCTCTAGAGGATTCAGTTGAGGTTGGCCTTGACTCTTGTTTCCTTGTTCCTTCAAAAAATATTCTGGAATCTTAGTAGTACTTGGTTGACAAGGTTATGTTCCATTTTGAGAACAAATATGTGATGTGATGTGATGCATGATTTATTTTATCTGAAAATAACGAAGTACATGCATGGTTCATGCCAATATTTTATTTAGATTCAGTATGTATTTAATTTGATGTTGTATAAGTATTAATGTTGCTGATAATTTATGTGCTTATTCAGTTGGAAAATGTTTAGTAGTTGTTTTCTGATGTTCAATTTCATTGCAACTAATTTCACTTGTAGGTTTGGAAAAGGTTCGTTAAGTTTGAGCAAACTTATGGGGATCTTGCTAGCATGCTTAAGGTAGTACTTTCTTATTCGTTTGAATACAACTTTTACCTTGCTACGTCCGGTTGTTTCTTTTTCGTCTGATTCTTGGCTTGTGAATTGTTGTTTTTTCGTAATAGCTGATCATATGAAAGGAAATCCTTGATGGAAAAAATTGGGATATATGATTTGTAGAATTTTCCGTCTCTTTTGCATAGATTAGGATATATATGCTCCACGTATCAATCCAAGCTTTGAGCAATACTTGACAAAATAGATTCAATTTAATAAGAGATGATCTAAGTTATTCTTGGATAAGATTAAGATATTATATGGCGATGCTTATGCTAGTCGAATAGACTGCACACAGATCGGTGGTAATCATTGTTGATAATTTATCGATGTATCATATGTAGGTTGAGCAAAGAAGGAAAGAAGCGTTTGGTGAAGAAGCAACAGCAGCATCAGAGAGTTCTCTGCAAGATGTTGTATCACGATATAGTTTCATGGATCTATGGCCGTGCTCTTCGAACGATCTTGATAATTTATCCCGGCAAGAGGTACCAGTTTGTATATTTTCTAAAAAGATGAATAATATGTTGCTTGTTGTCAATAACTACGTTCTCTTGAAAGCATTAGCTGTTAGGTGAAAGATCACAAAAAATTGTATCTTTAAAAAATATAGTAATTCATTTTAATTTCTACCTTTTTTAGTGGCTTGTCAAAAATACGAAGAAAGTCGAGAAGTCTATTATGCTTAATGGATCAACTTTTATAGGTATTATCTTCATTCTTGAACTTGGTTTCTCAATATTTCTTATTATGTGGGTAATGATACACTATTGTTGCAGATAAGGGACCGACTGCAAGTATTTCAACTACATCTTCAAAGGTTGTCTATCCTGATACTTCAAAGATGTTGATATATGATCCAAAGCATAATCCAGGTATGTAACCCATCTTGTTTGAAATTTGAATATTTTTTGGTGATTAAATTTTTTCGTGCTTACAACTTATGATATCCAAATTTACTATAGAAGATATGTTTTAAGAACCTTTTATGTTCAGATTAATAAAATATTTTTCAACCTTCAAAATCCAGTAACTATATGTTAATATATAAGAAAGTATCTTATAAAATCTTGACATTATGTTGAAGTATCGTAGTTTATCTTGCAAGACTTGTTTCTAATAATTTTTTATATTTATCACCAAAAACATACATGAAAAAAGCGCATTAAGAAAATTTTCTTTCAGTTTCCAAATATTGCAAGTATAATATGCGTGTTCCGTGTACATTTGTGGCCGTTATGGGGAGTTTTTATATAAGCTTGTTAACTTACCAATTCGCAGGGACAGGTGCTGCTGGAACAAATGCATTTGATGAAATTCTGAAAGCTACACCACCTGCTTTGGTCGCATTTTTAGCAAACCTACCTTCAGTTGACGGTAATTTTCAATATTTCTGTTAACTATTTTCTTGTCGTTCATACAGTACGTTCTTTTCACTATTTTATAGGCAATCTAGAAACATGCATTTGATTGTCAACTAGACGTATCACTCGTGAACTTGCCAATATGTATTAAATATGAATCATATCCATATGAGAAATGTGTCTTTAGTTGATAACAAGTGTTGAAGACGCATCTGAAAAGTATCGGCAAAATTATTTTGTAAAATAGTTTAAATTATTATCGGATACTTTTTGGATACATATCAGACATGTATCAGATACCTATATATAGTCTTCCATTTTTGAAGTGTATGGTATCTAAACGTTGTCGACAACCATGTTTGAAATTTGCAGGTCCAACACCAAATGTGGATATTGTGCTATCGATTTGTTTACAGAGCGACCTTCCAACGGGACAAAGTGGTAAAACTGGTATTCCATCACAATTGCCAGTAGGTCCTGCTCCTGCTACAAGTGAACTTTCTGGTTCAAGCAAGTCTCACCCTGTTCAAAGTGGCTTATCTCACAAGCAACCCGGTAGAAAGCAATACGGGAAAAGGAAACAATTAGACAGTATGTGCATAATCCCTTTCGACTATACTTCATGCTTACATTTTCCTTTGCCTTTTCTTTTTGATTTTGGACCTGTTTTGATTGCTTTACATCTGACGTAAACATCTGTGAGATTGTTTAGAAGTGCTAATAGAAACAACTTATAACATACCAACTTGTAACAAAGCGGCACCGACACTGTTTGACACGGACATGACACCAGCACATGTGATTATGTTCAATTAATTCATTTTATCAAATTTTTATTTGTGTCGACGTTTTCGTGTCAGAGTCGTGTCCGCGGTGCTTCATAGCTTCTAATCCAAGTTTCCTCTTGTACAAATAACCAATGAATTTACGTCAATTATGAAAATTATTAATTGCATCTCTTAGATTAGACACAACTCATCAAATATACAGAAATGTACTTTTACCTTTCTTCTTTATGTTTTCACATCAAAATTCCATTTTCATGTGATTGATATTTGTTATAATAATGTTCAGGCCAAGAGGAAGATGATACTAAATCTGTGCAAAGCCAACCACTTCCTCAAGACGCTTTCCGGATACGACAGTTCCAGAAAGCTCGAGCCGGCAGCACTTCACAAACAGGATCAGTTTCATATGGAAGCGCACTTTCTGGCGATTTATCCGGCAGCACTGGTTGA

Protein sequence

>MS.gene55566.t1

MDKTGGGTEKKTMVDKYNVESAEKLANEAQALSIAEATPIYEQLLQLFPTAAKFWKQYVEAHMAVNNDDAIKQIFSRCLLNCLQVPLWRCYIRFIRKVNDKKGAEGQEETKKAFEFMLSYVGSDIASGPVWMEYIAFLKSLPAAHPQEETHRMTVVRKVYQRAIITPTHHIEQLWKDYDSFESSVSQKLAKGLISEYQPKYNSARAVYRERKKFFDEIDWNMLAVPPTGSHKEEMQWMAWKKLLSFEKGNPQRIDIASSNKRVIFTYEQCLMYLYHYPDVWYDYATWHAKAGSIDAAIKVFQRSLKALPDSEMLRYAYAELEESRGAIQAAKKIYENLLGDSDNATALAHIQFIRFLRRTEGVEAARKYFLDARKSPSCTYHVYVAYASVAFCLDKDPKMAHNVFEAGLKHFMHEPVYILEYADFLIRLNDDQNIRALFERALSSLPLEDSVEVWKRFVKFEQTYGDLASMLKVEQRRKEAFGEEATAASESSLQDVVSRYSFMDLWPCSSNDLDNLSRQEWLVKNTKKVEKSIMLNGSTFIDKGPTASISTTSSKVVYPDTSKMLIYDPKHNPGTGAAGTNAFDEILKATPPALVAFLANLPSVDGPTPNVDIVLSICLQSDLPTGQSGKTGIPSQLPVGPAPATSELSGSSKSHPVQSGLSHKQPGRKQYGKRKQLDSQEEDDTKSVQSQPLPQDAFRIRQFQKARAGSTSQTGSVSYGSALSGDLSGSTG