AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene55806

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55806.t1 MTR_8g099550 99.508 610 3 0 1 610 1 610 0.0 1248
MS.gene55806.t1 MTR_5g009150 89.853 611 61 1 1 610 1 611 0.0 1152
MS.gene55806.t1 MTR_8g027675 83.553 608 99 1 1 608 1 607 0.0 1077
MS.gene55806.t1 MTR_4g098920 67.541 610 193 2 1 609 1 606 0.0 897
MS.gene55806.t1 MTR_8g105580 66.505 618 191 4 1 608 4 615 0.0 890
MS.gene55806.t1 MTR_7g451010 67.974 612 192 2 1 608 4 615 0.0 887
MS.gene55806.t1 MTR_8g009510 66.139 632 190 2 1 608 4 635 0.0 887
MS.gene55806.t1 MTR_1g032550 67.047 613 195 2 1 608 4 614 0.0 887
MS.gene55806.t1 MTR_8g105580 67.474 578 172 4 1 568 4 575 0.0 840
MS.gene55806.t1 MTR_8g009510 65.465 527 161 1 103 608 2 528 0.0 734
MS.gene55806.t1 MTR_2g009690 39.596 495 278 6 4 489 24 506 6.61e-106 338
MS.gene55806.t1 MTR_4g093750 38.742 493 281 5 4 487 15 495 9.74e-101 322
MS.gene55806.t1 MTR_4g093750 38.259 494 286 4 4 488 15 498 4.56e-100 321
MS.gene55806.t1 MTR_4g030140 29.808 520 318 12 1 495 4 501 1.48e-58 211
MS.gene55806.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.86e-58 208
MS.gene55806.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 1.24e-57 208
MS.gene55806.t1 MTR_4g134680 29.412 476 298 11 40 495 41 498 3.47e-57 207
MS.gene55806.t1 MTR_4g134680 33.333 201 134 0 295 495 1 201 1.12e-32 133
MS.gene55806.t1 MTR_8g087770 42.632 190 99 3 34 219 68 251 4.84e-32 132
MS.gene55806.t1 MTR_8g087750 33.546 313 190 8 34 340 71 371 8.30e-31 128
MS.gene55806.t1 MTR_8g463270 26.331 338 217 6 9 326 31 356 1.25e-18 90.5
MS.gene55806.t1 MTR_4g094300 27.723 202 135 5 21 214 28 226 1.43e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene55806.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene55806.t1 AT5G42080 86.557 610 82 0 1 610 1 610 0.0 1122
MS.gene55806.t1 AT5G42080 85.902 610 80 1 1 610 1 604 0.0 1107
MS.gene55806.t1 AT3G61760 82.651 611 104 2 1 610 1 610 0.0 1071
MS.gene55806.t1 AT3G61760 83.831 569 90 2 1 568 1 568 0.0 1010
MS.gene55806.t1 AT3G60190 67.690 619 189 2 1 608 4 622 0.0 910
MS.gene55806.t1 AT1G14830 68.791 612 185 3 1 608 4 613 0.0 907
MS.gene55806.t1 AT2G44590 63.948 613 217 3 1 610 1 612 0.0 852
MS.gene55806.t1 AT2G44590 61.375 611 215 4 1 608 1 593 0.0 808
MS.gene55806.t1 AT2G44590 61.275 612 215 5 1 608 1 594 0.0 804
MS.gene55806.t1 AT5G42080 88.345 429 50 0 1 429 1 429 0.0 804
MS.gene55806.t1 AT3G61760 84.270 445 68 2 1 444 1 444 0.0 795
MS.gene55806.t1 AT2G14120 36.273 499 293 7 3 487 20 507 1.35e-93 304
MS.gene55806.t1 AT2G14120 36.128 501 295 7 3 489 20 509 4.15e-93 303
MS.gene55806.t1 AT2G14120 36.273 499 293 7 3 487 20 507 4.51e-93 303
MS.gene55806.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.23e-92 303
MS.gene55806.t1 AT4G33650 36.948 498 292 6 3 488 36 523 1.36e-92 303
MS.gene55806.t1 AT2G14120 34.659 528 291 9 3 487 20 536 9.88e-89 293
MS.gene55806.t1 AT1G59610 30.561 517 315 14 1 495 4 498 1.22e-61 220
MS.gene55806.t1 AT1G10290 30.250 519 314 13 1 495 4 498 8.56e-61 218
MS.gene55806.t1 AT1G60500 29.810 473 284 14 34 483 65 512 2.37e-39 154
MS.gene55806.t1 AT1G60530 46.524 187 96 3 34 219 62 245 3.09e-39 146
MS.gene55806.t1 AT1G53140 31.651 218 120 5 9 214 47 247 1.77e-18 90.1

Find 155 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGTTCATTCGCTATTAA+AGG 0.155423 4.3:-4493161 MS.gene55806:intron
AGGAAAAGATTCACCGATTT+TGG 0.158213 4.3:-4497456 MS.gene55806:intron
GAATGAGGATCCTGCAATTA+TGG 0.256115 4.3:-4491461 MS.gene55806:CDS
AAGCCTGTTGCAGCTGATGC+TGG 0.280429 4.3:-4494143 MS.gene55806:CDS
TGAAACCGAACTGGCTCGTT+TGG 0.280984 4.3:-4494168 MS.gene55806:CDS
CTGGTTTACGGGCTGAGGTT+GGG 0.283613 4.3:-4492269 MS.gene55806:CDS
GTCGTTGGTGGCCAGAGTTC+TGG 0.296472 4.3:-4497695 MS.gene55806:CDS
GCAGCCGAACTGTATAATTC+TGG 0.297099 4.3:-4495765 MS.gene55806:intron
TTAGCTAGGTGTTTATATTC+AGG 0.300523 4.3:+4494414 None:intergenic
CTAAGGCGGTGCAAGCTCTT+TGG 0.312942 4.3:+4497777 None:intergenic
TTTGACGAAGATTGATCTAA+TGG 0.319005 4.3:-4495399 MS.gene55806:CDS
ATCTGACGGTTGATTTCTTT+CGG 0.331884 4.3:-4492164 MS.gene55806:CDS
TGAAGCAATACCCTGGTTTA+CGG 0.336223 4.3:-4492281 MS.gene55806:CDS
CAGAATGGGGTCTGAGCATC+TGG 0.343447 4.3:-4494391 MS.gene55806:CDS
TAGTGCACTCCCTACTCTTT+GGG 0.348707 4.3:-4497738 MS.gene55806:CDS
CTAGTGCACTCCCTACTCTT+TGG 0.351916 4.3:-4497739 MS.gene55806:CDS
GATATAATGATTCTTATCTA+AGG 0.354606 4.3:-4492086 MS.gene55806:CDS
AGGGACAGTTGAAATTTGTT+TGG 0.356007 4.3:+4497108 None:intergenic
GAATATATGCTAAGATGAAT+AGG 0.359659 4.3:+4497088 None:intergenic
TGTGCATGACATTGAGAATA+TGG 0.365705 4.3:-4496644 MS.gene55806:CDS
AGCTTTCAATGGAAAATATA+AGG 0.374495 4.3:-4493623 MS.gene55806:CDS
AGACTGAATGCCTGGAATCT+TGG 0.385851 4.3:+4494217 None:intergenic
TTGACACTCATCGATCTTCC+TGG 0.386900 4.3:-4496819 MS.gene55806:CDS
TGGTTTACGGGCTGAGGTTG+GGG 0.387468 4.3:-4492268 MS.gene55806:CDS
GAAGCAATACCCTGGTTTAC+GGG 0.387693 4.3:-4492280 MS.gene55806:CDS
GCATCAACAGCTGCCTCGGC+AGG 0.388371 4.3:+4493501 None:intergenic
CCTGGTTTACGGGCTGAGGT+TGG 0.394247 4.3:-4492270 MS.gene55806:CDS
AACTGCATCTATTTCAGCTT+GGG 0.397169 4.3:+4491393 None:intergenic
AAAAGAAAAGTTACCAAAAT+CGG 0.399826 4.3:+4497443 None:intergenic
AATCCACTCTAGTTACAATC+AGG 0.400990 4.3:-4493527 MS.gene55806:CDS
GTTTGACAAGCAGCTTTCAA+TGG 0.401921 4.3:-4493634 MS.gene55806:CDS
CAAAGAGCTTGCACCGCCTT+AGG 0.402102 4.3:-4497776 MS.gene55806:CDS
AACACTACAACTGGTCGATA+TGG 0.405406 4.3:-4492196 MS.gene55806:CDS
GAAACCGAACTGGCTCGTTT+GGG 0.407691 4.3:-4494167 MS.gene55806:CDS
CTAATTAGAGACTGAATGCC+TGG 0.416975 4.3:+4494209 None:intergenic
GATTTCTTACCTCGTGGATC+AGG 0.421686 4.3:-4497638 MS.gene55806:intron
AAACACCTAGCTAACAGAAT+GGG 0.429971 4.3:-4494405 MS.gene55806:CDS
CTTTCCCAAACGAGCCAGTT+CGG 0.441013 4.3:+4494163 None:intergenic
ACCCCAGCATCAGCTGCAAC+AGG 0.443010 4.3:+4494140 None:intergenic
ATATTCAAAGACCATCTTGA+TGG 0.447318 4.3:-4493826 MS.gene55806:CDS
CCATTGTTTATTGTCAAGTA+CGG 0.448290 4.3:-4491713 MS.gene55806:CDS
CAAAAGGGCAACACTACAAC+TGG 0.449599 4.3:-4492205 MS.gene55806:CDS
CAAAGCTGTTAGTGAGACTC+TGG 0.449716 4.3:-4493128 MS.gene55806:intron
GAATGAGAGATGAAAGCAAA+AGG 0.450845 4.3:-4492221 MS.gene55806:CDS
CACTAACAGCTTTGTGAACC+AGG 0.457295 4.3:+4493137 None:intergenic
CCTGCTATCGCCGTCGTTGG+TGG 0.458671 4.3:-4497707 MS.gene55806:CDS
TTCTGGAAAATCCTCCGTAT+TGG 0.463410 4.3:-4497678 MS.gene55806:CDS
AGCCTGTTGCAGCTGATGCT+GGG 0.466361 4.3:-4494142 MS.gene55806:CDS
CCAACCTCAGCCCGTAAACC+AGG 0.468070 4.3:+4492270 None:intergenic
CAGACCCCATTCTGTTAGCT+AGG 0.470784 4.3:+4494400 None:intergenic
TCCGTATTGGAGAGTGTTGT+CGG 0.471538 4.3:-4497665 MS.gene55806:CDS
AATATATGCTAAGATGAATA+GGG 0.472521 4.3:+4497089 None:intergenic
AGCTCCCTGCTGCTCTGAAA+AGG 0.472526 4.3:-4493662 MS.gene55806:CDS
CATATAGGTTAAAGTTCCCT+TGG 0.473662 4.3:-4494530 MS.gene55806:CDS
AAATGAAATTGAAACCGAAC+TGG 0.477658 4.3:-4494177 MS.gene55806:CDS
GAAGGAAATTCAAGATGAAA+CGG 0.484800 4.3:-4497149 MS.gene55806:CDS
CTGAAATAGATGCAGTTGCT+TGG 0.485487 4.3:-4491387 MS.gene55806:CDS
TATAATTCTGGCTATTTCGC+CGG 0.485900 4.3:-4495753 MS.gene55806:CDS
TGAAATTTGTTTGGATCGAC+CGG 0.492583 4.3:+4497117 None:intergenic
TTGCTTGCTCAGATGTTGGA+AGG 0.493499 4.3:-4494558 MS.gene55806:intron
AGACGACGGTATCCTTGCTC+TGG 0.498380 4.3:+4493555 None:intergenic
CTACGACGTTCCATAATTGC+AGG 0.498628 4.3:+4491451 None:intergenic
CAACTGGTCGATATGGAGTC+TGG 0.501050 4.3:-4492189 MS.gene55806:CDS
GTAATCAAGTCCAAGATTCC+AGG 0.501222 4.3:-4494227 MS.gene55806:CDS
CAACTGCATCTATTTCAGCT+TGG 0.501627 4.3:+4491392 None:intergenic
TTTGTCCTCATTACTGAATG+AGG 0.502603 4.3:-4491476 MS.gene55806:CDS
TATTTGTAGGGATCGTTACT+CGG 0.504045 4.3:-4497551 MS.gene55806:intron
ATACCCTGGTTTACGGGCTG+AGG 0.506554 4.3:-4492274 MS.gene55806:CDS
CCACCAACGACGGCGATAGC+AGG 0.509781 4.3:+4497707 None:intergenic
CATTGTTTATTGTCAAGTAC+GGG 0.511383 4.3:-4491712 MS.gene55806:CDS
TACCGGTAGGATCCACTTCA+CGG 0.512959 4.3:+4495690 None:intergenic
TGTTGGAAGGGAGAGCATAT+AGG 0.515104 4.3:-4494545 MS.gene55806:CDS
CTGAGTTTCTTCACCTTCCG+AGG 0.516849 4.3:-4497476 MS.gene55806:CDS
GATTCTTATCTAAGGCGAAT+CGG 0.517945 4.3:-4492078 MS.gene55806:intron
GATGAAACGGATAGAGAAAC+CGG 0.518246 4.3:-4497136 MS.gene55806:CDS
TGCTTGCTCAGATGTTGGAA+GGG 0.521748 4.3:-4494557 MS.gene55806:intron
CCACCCTTGTCCACATCTTG+AGG 0.522131 4.3:+4492135 None:intergenic
AATTAAAATTTCCCGTGAAG+TGG 0.523008 4.3:-4495702 MS.gene55806:CDS
TACCGCATCAACAGCTGCCT+CGG 0.523525 4.3:+4493497 None:intergenic
TAAACACCTAGCTAACAGAA+TGG 0.524545 4.3:-4494406 MS.gene55806:CDS
GGGCAAGTTATATGCAATCA+TGG 0.524553 4.3:-4493872 MS.gene55806:CDS
TAGTGGCCTTGCAAAGAGAC+TGG 0.526892 4.3:-4491431 MS.gene55806:CDS
TCAATTTCCTACAGGCGACC+TGG 0.527613 4.3:-4493717 MS.gene55806:intron
ATGTCATGCACAATACTCTC+AGG 0.527874 4.3:+4496655 None:intergenic
GGAAGAGAATCCCAAAGAGT+AGG 0.528008 4.3:+4497728 None:intergenic
AGATTCACCGTGGTCACCTA+AGG 0.530232 4.3:+4497760 None:intergenic
GTTGCAATATCTTGATTAGC+CGG 0.531053 4.3:+4495734 None:intergenic
CTATCGAAAATTGAATGAGT+GGG 0.536130 4.3:+4492108 None:intergenic
TTGTGTAGCTGCGGTGAGGA+AGG 0.537663 4.3:-4497167 MS.gene55806:intron
TGACACTCATCGATCTTCCT+GGG 0.537665 4.3:-4496818 MS.gene55806:CDS
CAGTAATGAGGACAAACGCT+TGG 0.541024 4.3:+4491483 None:intergenic
GCCGACAACACTCTCCAATA+CGG 0.542785 4.3:+4497664 None:intergenic
GAAGAGAATCCCAAAGAGTA+GGG 0.542886 4.3:+4497729 None:intergenic
CTATTTCAGCTTGGGCACTT+CGG 0.542999 4.3:+4491401 None:intergenic
CTTCCTGCTATCGCCGTCGT+TGG 0.543291 4.3:-4497710 MS.gene55806:CDS
TGCCGAGGCAGCTGTTGATG+CGG 0.543898 4.3:-4493499 MS.gene55806:intron
CAGCTTCACAAGAGTGATGA+GGG 0.550682 4.3:-4497513 MS.gene55806:CDS
ATAGCCAGAATTATACAGTT+CGG 0.552134 4.3:+4495761 None:intergenic
GAACATTACCTTCTCAATGT+AGG 0.558262 4.3:+4496615 None:intergenic
TCATTCGCTATTAAAGGACC+TGG 0.558428 4.3:-4493155 MS.gene55806:CDS
AGGTTAAAGTTCCCTTGGAT+CGG 0.560301 4.3:-4494525 MS.gene55806:CDS
AATGAGAGATGAAAGCAAAA+GGG 0.561742 4.3:-4492220 MS.gene55806:CDS
AAACTTATTACAGAAGCTGA+TGG 0.561888 4.3:-4493600 MS.gene55806:CDS
TCTATCGAAAATTGAATGAG+TGG 0.564548 4.3:+4492107 None:intergenic
TACAATCAGGGGCCCTGCCG+AGG 0.565034 4.3:-4493514 MS.gene55806:CDS
CATCTTATTGCTCCAGAGCA+AGG 0.566493 4.3:-4493567 MS.gene55806:CDS
CATCAACAGCTGCCTCGGCA+GGG 0.569211 4.3:+4493502 None:intergenic
TCGGAAGCTTCCTCAAGATG+TGG 0.572910 4.3:-4492145 MS.gene55806:CDS
CTGTTCACAACACCGATCCA+AGG 0.576821 4.3:+4494513 None:intergenic
CGATCTTCCTGGGCTTACGA+AGG 0.578446 4.3:-4496808 MS.gene55806:CDS
CTGGAGCAATAAGATGAGGT+TGG 0.582750 4.3:+4493574 None:intergenic
TGACAATAAACAATGGACTT+CGG 0.583582 4.3:+4491720 None:intergenic
AGGATCCTCATTCAGTAATG+AGG 0.586057 4.3:+4491471 None:intergenic
GGCAAAGATTTCTTACCTCG+TGG 0.586975 4.3:-4497644 MS.gene55806:CDS
CTTAGCATATATTCTCCCAA+TGG 0.587409 4.3:-4497079 MS.gene55806:intron
TCCCGTGAAGTGGATCCTAC+CGG 0.593357 4.3:-4495692 MS.gene55806:intron
TTGTGAAGCTGCAAAACAAG+TGG 0.596364 4.3:+4497525 None:intergenic
AATCTTCGTCAAAACTCCAA+TGG 0.598241 4.3:+4495409 None:intergenic
GCCCCTGATTGTAACTAGAG+TGG 0.598316 4.3:+4493524 None:intergenic
GCAGCTTCACAAGAGTGATG+AGG 0.600736 4.3:-4497514 MS.gene55806:CDS
ACAGCGACCTTCGTAAGCCC+AGG 0.603913 4.3:+4496801 None:intergenic
ATCCACTCTAGTTACAATCA+GGG 0.605709 4.3:-4493526 MS.gene55806:CDS
ACCGGTAGGATCCACTTCAC+GGG 0.605810 4.3:+4495691 None:intergenic
GCTTCCTCAAGATGTGGACA+AGG 0.607803 4.3:-4492139 MS.gene55806:CDS
ACACATACACGCCATCAAGA+TGG 0.610251 4.3:+4493815 None:intergenic
AGAACTCTGGCCACCAACGA+CGG 0.610611 4.3:+4497697 None:intergenic
GCCTGTTGCAGCTGATGCTG+GGG 0.614544 4.3:-4494141 MS.gene55806:intron
TATGGAGTCTGGCTATCTGA+CGG 0.622814 4.3:-4492178 MS.gene55806:CDS
ACAACTCCAGTCTCTTTGCA+AGG 0.623060 4.3:+4491425 None:intergenic
TGCTCTGGAGCAATAAGATG+AGG 0.624218 4.3:+4493570 None:intergenic
CCGTACTTGACAATAAACAA+TGG 0.625270 4.3:+4491713 None:intergenic
CAGGATTTGAAGCAATACCC+TGG 0.628775 4.3:-4492288 MS.gene55806:CDS
GGGCTTACGAAGGTCGCTGT+AGG 0.630278 4.3:-4496798 MS.gene55806:intron
TGTTCACAACACCGATCCAA+GGG 0.632790 4.3:+4494514 None:intergenic
GGTTCGCTCCTACATTGAGA+AGG 0.633877 4.3:-4496623 MS.gene55806:intron
TCTGGCGAAGATGCTCTCAA+AGG 0.634471 4.3:-4494373 MS.gene55806:intron
TCCACTCTAGTTACAATCAG+GGG 0.638669 4.3:-4493525 MS.gene55806:CDS
TGGACTTACATCAACAGCAT+CGG 0.640860 4.3:+4495367 None:intergenic
AACACCTAGCTAACAGAATG+GGG 0.640990 4.3:-4494404 MS.gene55806:CDS
GCAATTATGGAACGTCGTAG+TGG 0.642760 4.3:-4491448 MS.gene55806:CDS
TGTTTATTGTCAAGTACGGG+AGG 0.645558 4.3:-4491709 MS.gene55806:CDS
CCTCAAGATGTGGACAAGGG+TGG 0.645800 4.3:-4492135 MS.gene55806:CDS
GAAGATTGATCTAATGGACA+AGG 0.654022 4.3:-4495393 MS.gene55806:CDS
TTCACCGTGGTCACCTAAGG+CGG 0.656734 4.3:+4497763 None:intergenic
TATCGAAAATTGAATGAGTG+GGG 0.658642 4.3:+4492109 None:intergenic
CAACCTCAGCCCGTAAACCA+GGG 0.671483 4.3:+4492271 None:intergenic
TGCACCGCCTTAGGTGACCA+CGG 0.675185 4.3:-4497767 MS.gene55806:CDS
TAATTTGTGTAGCTGCGGTG+AGG 0.676029 4.3:-4497171 MS.gene55806:intron
ATTTCCTACAGGCGACCTGG+AGG 0.691883 4.3:-4493714 MS.gene55806:intron
GACAACACTCTCCAATACGG+AGG 0.703245 4.3:+4497667 None:intergenic
CTTCCTCAAGATGTGGACAA+GGG 0.710629 4.3:-4492138 MS.gene55806:CDS
GAGTGGATTCAATGAGACGA+CGG 0.714501 4.3:+4493541 None:intergenic
AAGATTGATCTAATGGACAA+GGG 0.722186 4.3:-4495392 MS.gene55806:CDS
ATGTTGACATGATTGCTGCA+AGG 0.728270 4.3:-4494467 MS.gene55806:CDS
GGAGTGCACTAGATTCACCG+TGG 0.804143 4.3:+4497750 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATAAAAAAAATAAT+TGG + chr4.3:4493843-4493862 None:intergenic 0.0%
!! AAAAAAATCTATATTTGTTT+CGG + chr4.3:4492835-4492854 None:intergenic 10.0%
!! ACATATTATATATAAGAATA+AGG + chr4.3:4492231-4492250 None:intergenic 10.0%
!! ATAAATAACTAAGAAAAATA+TGG - chr4.3:4492667-4492686 MS.gene55806:intron 10.0%
!! CATATTATATATAAGAATAA+GGG + chr4.3:4492230-4492249 None:intergenic 10.0%
!! TTATATAGATATACATAATT+GGG + chr4.3:4494053-4494072 None:intergenic 10.0%
!!! ATTTTTTTTTTATACAATTG+GGG - chr4.3:4491573-4491592 MS.gene55806:intron 10.0%
!!! GTATTTTTTTTTTATACAAT+TGG - chr4.3:4491571-4491590 MS.gene55806:intron 10.0%
!! AAAATAAATGGATATTATGT+GGG + chr4.3:4495184-4495203 None:intergenic 15.0%
!! ATAACATTTGTGTAAAAATT+AGG - chr4.3:4493358-4493377 MS.gene55806:intron 15.0%
!! GTTATATAGATATACATAAT+TGG + chr4.3:4494054-4494073 None:intergenic 15.0%
!! TAAATAAATTGTATAATTGC+TGG - chr4.3:4496142-4496161 MS.gene55806:intron 15.0%
!! TTTCATATTTATAAGAACTA+AGG - chr4.3:4494423-4494442 MS.gene55806:CDS 15.0%
!!! AAATTAGTGATTTTTCTAAT+TGG - chr4.3:4495886-4495905 MS.gene55806:intron 15.0%
!!! AATAAATGAAAAGTATAATC+AGG + chr4.3:4497582-4497601 None:intergenic 15.0%
!!! ACTTCACTTTTTAAATATAT+TGG + chr4.3:4497297-4497316 None:intergenic 15.0%
!!! ATAATACATACAATTTTACA+TGG - chr4.3:4494108-4494127 MS.gene55806:intron 15.0%
!!! ATAGGAAATAAAATATTTTC+AGG - chr4.3:4492616-4492635 MS.gene55806:intron 15.0%
!!! ATATAGAAACATTTTGAAAA+TGG + chr4.3:4491838-4491857 None:intergenic 15.0%
!!! TTTAAGTTCATCAAAATAAA+TGG + chr4.3:4495196-4495215 None:intergenic 15.0%
!! AAAAGAAAAGTTACCAAAAT+CGG + chr4.3:4491747-4491766 None:intergenic 20.0%
!! AATATATGCTAAGATGAATA+GGG + chr4.3:4492101-4492120 None:intergenic 20.0%
!! ACATAAGTTCTCAAAAAAAT+TGG + chr4.3:4495760-4495779 None:intergenic 20.0%
!! ACATTAAGTAAATAGTTTGA+TGG - chr4.3:4493710-4493729 MS.gene55806:intron 20.0%
!! ATCATTAATTTCAAAAACTG+TGG - chr4.3:4493323-4493342 MS.gene55806:intron 20.0%
!! ATGAACAACTATTACAAAAA+GGG + chr4.3:4496804-4496823 None:intergenic 20.0%
!! ATTCAAATCAGTAAAATCAA+TGG + chr4.3:4491797-4491816 None:intergenic 20.0%
!! CAAAATAAATGGATATTATG+TGG + chr4.3:4495185-4495204 None:intergenic 20.0%
!! CATAAGTTCTCAAAAAAATT+GGG + chr4.3:4495759-4495778 None:intergenic 20.0%
!! CATGATTAAATTAATACAGT+TGG - chr4.3:4496821-4496840 MS.gene55806:CDS 20.0%
!! GATATAATGATTCTTATCTA+AGG - chr4.3:4497101-4497120 MS.gene55806:CDS 20.0%
!! TAATCTATGCAATTATCATT+CGG + chr4.3:4492874-4492893 None:intergenic 20.0%
!! TATATAATATGTAGATCTGT+CGG - chr4.3:4492239-4492258 MS.gene55806:CDS 20.0%
!! TTATTTAAATATAGGGACTT+GGG + chr4.3:4492935-4492954 None:intergenic 20.0%
!! TTCAAATCAGTAAAATCAAT+GGG + chr4.3:4491796-4491815 None:intergenic 20.0%
!! TTGAAAGCAGAAAATTTATA+GGG + chr4.3:4496383-4496402 None:intergenic 20.0%
!! TTTATTTAAATATAGGGACT+TGG + chr4.3:4492936-4492955 None:intergenic 20.0%
!!! AATTTTGTCATATGTCAATA+TGG - chr4.3:4497418-4497437 MS.gene55806:intron 20.0%
!!! AATTTTTTTGAGAACTTATG+TGG - chr4.3:4495759-4495778 MS.gene55806:CDS 20.0%
!!! CAAAAATCAAAGGAAAATTT+TGG - chr4.3:4496565-4496584 MS.gene55806:intron 20.0%
!!! CAAAATTTTCCTTTGATTTT+TGG + chr4.3:4496567-4496586 None:intergenic 20.0%
!!! CTATAATTTTGTCTATTTGT+GGG + chr4.3:4492721-4492740 None:intergenic 20.0%
!!! GATAAAAGTTATGTTTCTAT+AGG + chr4.3:4492782-4492801 None:intergenic 20.0%
!!! GGGGTTTTTATTTAAATATA+GGG + chr4.3:4492942-4492961 None:intergenic 20.0%
!!! GTTTATTTGTTTCAACTTTT+AGG - chr4.3:4493747-4493766 MS.gene55806:intron 20.0%
!!! TCTATAATTTTGTCTATTTG+TGG + chr4.3:4492722-4492741 None:intergenic 20.0%
!!! TGGGGTTTTTATTTAAATAT+AGG + chr4.3:4492943-4492962 None:intergenic 20.0%
!!! TTATCTTTTTGTAATGCTAT+GGG - chr4.3:4496701-4496720 MS.gene55806:intron 20.0%
!!! TTATTCAAGTGTTGAATTAT+GGG - chr4.3:4492315-4492334 MS.gene55806:intron 20.0%
!!! TTGATTTTTATATCAGCATT+TGG - chr4.3:4494932-4494951 MS.gene55806:intron 20.0%
!!! TTTATTCAAGTGTTGAATTA+TGG - chr4.3:4492314-4492333 MS.gene55806:intron 20.0%
!!! TTTCAATATTTCCTTTTCTT+TGG - chr4.3:4493521-4493540 MS.gene55806:CDS 20.0%
! AAAACAACTGATCATTATCA+GGG + chr4.3:4494551-4494570 None:intergenic 25.0%
! AATATAATAGCATGCAAACA+TGG - chr4.3:4493860-4493879 MS.gene55806:CDS 25.0%
! AATTGAAACCAGAAATTTAG+AGG - chr4.3:4496540-4496559 MS.gene55806:intron 25.0%
! ACATGGAAACATTTCAAAAT+CGG + chr4.3:4491964-4491983 None:intergenic 25.0%
! AGACCTTAAAAAAAGTCATT+TGG + chr4.3:4496448-4496467 None:intergenic 25.0%
! AGCTTTCAATGGAAAATATA+AGG - chr4.3:4495564-4495583 MS.gene55806:intron 25.0%
! AGTGCAAAAAGTTAGAATAA+TGG + chr4.3:4493654-4493673 None:intergenic 25.0%
! ATAATTGATGCGTATTTGTA+GGG - chr4.3:4491624-4491643 MS.gene55806:intron 25.0%
! ATATATTCAAACGTACCATT+GGG + chr4.3:4492126-4492145 None:intergenic 25.0%
! ATCAATATGACTTTAGTTGT+TGG + chr4.3:4494917-4494936 None:intergenic 25.0%
! ATTTATAAGAACTAAGGAGT+TGG - chr4.3:4494429-4494448 MS.gene55806:CDS 25.0%
! CAACTTAGTGTTAGAATATT+GGG - chr4.3:4494019-4494038 MS.gene55806:intron 25.0%
! CATGAACAACTATTACAAAA+AGG + chr4.3:4496805-4496824 None:intergenic 25.0%
! GAATATATGCTAAGATGAAT+AGG + chr4.3:4492102-4492121 None:intergenic 25.0%
! GATATACATAATTGGGATTA+TGG + chr4.3:4494046-4494065 None:intergenic 25.0%
! GATGAACTTAAATATTGATG+TGG - chr4.3:4495204-4495223 MS.gene55806:intron 25.0%
! GATTTAATCATAAAGATGAG+AGG - chr4.3:4492805-4492824 MS.gene55806:intron 25.0%
! GTTGAAAGCAGAAAATTTAT+AGG + chr4.3:4496384-4496403 None:intergenic 25.0%
! TAAAACAACTGATCATTATC+AGG + chr4.3:4494552-4494571 None:intergenic 25.0%
! TAGAATAATGGTTAAATCTG+CGG + chr4.3:4493642-4493661 None:intergenic 25.0%
! TAGAGAATAAATAAGAATGC+AGG + chr4.3:4494367-4494386 None:intergenic 25.0%
! TATATATTCAAACGTACCAT+TGG + chr4.3:4492127-4492146 None:intergenic 25.0%
! TATCATCTGTCATTGTTAAA+TGG - chr4.3:4497348-4497367 MS.gene55806:intron 25.0%
! TCAAATCAGTAAAATCAATG+GGG + chr4.3:4491795-4491814 None:intergenic 25.0%
! TCGTTAAATGCATTCAAAAT+GGG + chr4.3:4493559-4493578 None:intergenic 25.0%
! TCTATAGGATGATTATGTAA+AGG + chr4.3:4492767-4492786 None:intergenic 25.0%
! TGATGTTCATACATAATACA+AGG + chr4.3:4493307-4493326 None:intergenic 25.0%
! TTCGTTAAATGCATTCAAAA+TGG + chr4.3:4493560-4493579 None:intergenic 25.0%
! TTGGAACAGAGAATTTAAAA+TGG + chr4.3:4495094-4495113 None:intergenic 25.0%
! TTTATAAGAACTAAGGAGTT+GGG - chr4.3:4494430-4494449 MS.gene55806:CDS 25.0%
!! AAAAGTATAATCAGGAAACT+TGG + chr4.3:4497574-4497593 None:intergenic 25.0%
!! AAAGGAAATATTGAAAGTAC+CGG + chr4.3:4493517-4493536 None:intergenic 25.0%
!! AAATCAAAGGAAAATTTTGG+AGG - chr4.3:4496568-4496587 MS.gene55806:intron 25.0%
!! AATCAAAGGAAAATTTTGGA+GGG - chr4.3:4496569-4496588 MS.gene55806:intron 25.0%
!! ATTTTTGCATAACTGTAGAT+GGG - chr4.3:4492506-4492525 MS.gene55806:intron 25.0%
!! CAAGTACTAAAGCTTTTAAT+AGG - chr4.3:4492598-4492617 MS.gene55806:intron 25.0%
!! GCATTTAACGAATCTTTTTA+TGG - chr4.3:4493568-4493587 MS.gene55806:CDS 25.0%
!! GTTATCTTTTTGTAATGCTA+TGG - chr4.3:4496700-4496719 MS.gene55806:intron 25.0%
!! TAATTTACAGCTTTTAGACA+GGG + chr4.3:4495872-4495891 None:intergenic 25.0%
!! TGAACTTTTGTAAAAAAAGC+AGG + chr4.3:4496414-4496433 None:intergenic 25.0%
!! TTATAAATTTTATCACCTCC+AGG + chr4.3:4495491-4495510 None:intergenic 25.0%
!!! ATTTTCAGGATCAACTTATA+TGG - chr4.3:4492630-4492649 MS.gene55806:intron 25.0%
!!! CTGTTTTTTCATTGCATAAA+GGG + chr4.3:4493001-4493020 None:intergenic 25.0%
!!! GTTCCAAATGACTTTTTTTA+AGG - chr4.3:4496442-4496461 MS.gene55806:intron 25.0%
!!! TATTTTTGCATAACTGTAGA+TGG - chr4.3:4492505-4492524 MS.gene55806:intron 25.0%
!!! TCTGTTTTTTCATTGCATAA+AGG + chr4.3:4493002-4493021 None:intergenic 25.0%
!!! TGAACTTGGACTTTTTTTAT+GGG + chr4.3:4492972-4492991 None:intergenic 25.0%
!!! TTTGATGGTTTTCTAATCAT+TGG - chr4.3:4493725-4493744 MS.gene55806:intron 25.0%
!!! TTTTGTTGACTAATGAGATT+AGG + chr4.3:4491389-4491408 None:intergenic 25.0%
AAACTTATTACAGAAGCTGA+TGG - chr4.3:4495587-4495606 MS.gene55806:intron 30.0%
AAACTTGAACGGACAATATA+TGG - chr4.3:4497155-4497174 MS.gene55806:CDS 30.0%
AAAGTAGTCTCAAACTTGAA+CGG - chr4.3:4497144-4497163 MS.gene55806:CDS 30.0%
AAATGAAATTGAAACCGAAC+TGG - chr4.3:4495010-4495029 MS.gene55806:intron 30.0%
AAATTAATACAGTTGGAACC+TGG - chr4.3:4496828-4496847 MS.gene55806:CDS 30.0%
AAGGTCAAAACAATGGAAAA+GGG - chr4.3:4493897-4493916 MS.gene55806:intron 30.0%
AATAAGCTGTTTATCCAAAC+AGG - chr4.3:4496611-4496630 MS.gene55806:intron 30.0%
AATGAGAGATGAAAGCAAAA+GGG - chr4.3:4496967-4496986 MS.gene55806:intron 30.0%
AATTAAAATTTCCCGTGAAG+TGG - chr4.3:4493485-4493504 MS.gene55806:intron 30.0%
AATTCTCAAAGCAAATACAG+AGG + chr4.3:4496307-4496326 None:intergenic 30.0%
ACTCGATAATGAACAGATTT+AGG + chr4.3:4496638-4496657 None:intergenic 30.0%
ATAAGCTGTTTATCCAAACA+GGG - chr4.3:4496612-4496631 MS.gene55806:intron 30.0%
ATAGCAGCAAGAAATAAAAC+TGG + chr4.3:4496114-4496133 None:intergenic 30.0%
ATAGCCAGAATTATACAGTT+CGG + chr4.3:4493429-4493448 None:intergenic 30.0%
ATATTCAAAGACCATCTTGA+TGG - chr4.3:4495361-4495380 MS.gene55806:intron 30.0%
ATTCTCAAAGCAAATACAGA+GGG + chr4.3:4496306-4496325 None:intergenic 30.0%
ATTTGGAAACAGCATTTGAA+TGG - chr4.3:4496203-4496222 MS.gene55806:intron 30.0%
CAAATCAGTAAAATCAATGG+GGG + chr4.3:4491794-4491813 None:intergenic 30.0%
CAACATGAAAACACTTGATA+AGG + chr4.3:4495267-4495286 None:intergenic 30.0%
CATAATTGATGCGTATTTGT+AGG - chr4.3:4491623-4491642 MS.gene55806:intron 30.0%
CATTGTTTATTGTCAAGTAC+GGG - chr4.3:4497475-4497494 MS.gene55806:CDS 30.0%
CCATTGTTTATTGTCAAGTA+CGG - chr4.3:4497474-4497493 MS.gene55806:CDS 30.0%
CGTTAAATGCATTCAAAATG+GGG + chr4.3:4493558-4493577 None:intergenic 30.0%
CTATCGAAAATTGAATGAGT+GGG + chr4.3:4497082-4497101 None:intergenic 30.0%
GAAATGTTTCCATGTATGTA+TGG - chr4.3:4491969-4491988 MS.gene55806:intron 30.0%
GAAGGAAATTCAAGATGAAA+CGG - chr4.3:4492038-4492057 MS.gene55806:intron 30.0%
GAGAAATTACTTCCAAACTT+GGG + chr4.3:4492904-4492923 None:intergenic 30.0%
GCAAAGAATGAGTATTTACA+AGG + chr4.3:4494076-4494095 None:intergenic 30.0%
GCAACTTAGTGTTAGAATAT+TGG - chr4.3:4494018-4494037 MS.gene55806:intron 30.0%
GTAGGAAATTGACACAAATA+AGG + chr4.3:4495462-4495481 None:intergenic 30.0%
TATCGAAAATTGAATGAGTG+GGG + chr4.3:4497081-4497100 None:intergenic 30.0%
TATTTGTGTCAATTTCCTAC+AGG - chr4.3:4495462-4495481 MS.gene55806:intron 30.0%
TCATTTGTGTGTGTTTATAC+AGG - chr4.3:4495151-4495170 MS.gene55806:intron 30.0%
TCTATCGAAAATTGAATGAG+TGG + chr4.3:4497083-4497102 None:intergenic 30.0%
TGAGAAATTACTTCCAAACT+TGG + chr4.3:4492905-4492924 None:intergenic 30.0%
TGATGAGTAGAAATTTACAG+AGG - chr4.3:4494245-4494264 MS.gene55806:intron 30.0%
TGTAACTGAAATAGTGATGT+AGG - chr4.3:4496678-4496697 MS.gene55806:intron 30.0%
TGTAAGATCGTTTGAATTGT+AGG - chr4.3:4492692-4492711 MS.gene55806:intron 30.0%
TTAGCTAGGTGTTTATATTC+AGG + chr4.3:4494776-4494795 None:intergenic 30.0%
TTCTAGTGACAATGTTCATT+TGG - chr4.3:4496186-4496205 MS.gene55806:intron 30.0%
TTGTTACAAGGTCAAAACAA+TGG - chr4.3:4493890-4493909 MS.gene55806:intron 30.0%
TTTAGAGGACCAAAAATCAA+AGG - chr4.3:4496555-4496574 MS.gene55806:intron 30.0%
TTTGACGAAGATTGATCTAA+TGG - chr4.3:4493788-4493807 MS.gene55806:intron 30.0%
! AAGATTGATCTAATGGACAA+GGG - chr4.3:4493795-4493814 MS.gene55806:intron 30.0%
! AATATGACACTCCATTTTCA+GGG - chr4.3:4495239-4495258 MS.gene55806:intron 30.0%
! AATATTGATGTGGTGATGAT+TGG - chr4.3:4495214-4495233 MS.gene55806:intron 30.0%
! CGTGAACTTTTGTAAAAAAC+AGG - chr4.3:4496511-4496530 MS.gene55806:intron 30.0%
! CTAATTTACAGCTTTTAGAC+AGG + chr4.3:4495873-4495892 None:intergenic 30.0%
! GAAGTTTTGCTTATAGTGAA+CGG - chr4.3:4497312-4497331 MS.gene55806:intron 30.0%
! GCAAGATAAACTTTCTAGAA+TGG + chr4.3:4493251-4493270 None:intergenic 30.0%
! GCAAGCAAAAGTATATATCA+TGG + chr4.3:4494617-4494636 None:intergenic 30.0%
! GCATCATTTGCTGAAATATT+AGG - chr4.3:4494857-4494876 MS.gene55806:intron 30.0%
! GTTTTGCTTATAATAGTGAC+CGG + chr4.3:4497206-4497225 None:intergenic 30.0%
! TAATATGACACTCCATTTTC+AGG - chr4.3:4495238-4495257 MS.gene55806:intron 30.0%
! TAATCTTTTGCTGATCTCTT+TGG - chr4.3:4495967-4495986 MS.gene55806:intron 30.0%
! TGACAATAAACAATGGACTT+CGG + chr4.3:4497470-4497489 None:intergenic 30.0%
! TGAGATAAAGGGTTTTCTTT+CGG - chr4.3:4496338-4496357 MS.gene55806:intron 30.0%
!! CATGGTTATAGTTTGTTACA+AGG - chr4.3:4493878-4493897 MS.gene55806:intron 30.0%
!! TGTTTTGAATTGATTCTTCC+AGG - chr4.3:4496008-4496027 MS.gene55806:intron 30.0%
!! TTTTTGGTCCTCTAAATTTC+TGG + chr4.3:4496551-4496570 None:intergenic 30.0%
!!! CTGAACTTGGACTTTTTTTA+TGG + chr4.3:4492973-4492992 None:intergenic 30.0%
!!! CTTTTTGCACTGTTGATTTT+TGG - chr4.3:4493663-4493682 MS.gene55806:CDS 30.0%
AAAAAAATACCTGATCCACG+AGG + chr4.3:4491561-4491580 None:intergenic 35.0%
AAACAAAACCCAGGTTGTAA+AGG - chr4.3:4493039-4493058 MS.gene55806:intron 35.0%
AAACACCTAGCTAACAGAAT+GGG - chr4.3:4494782-4494801 MS.gene55806:intron 35.0%
AACGCTAAAAGCCAAAGAAA+AGG + chr4.3:4493535-4493554 None:intergenic 35.0%
AACTGCATCTATTTCAGCTT+GGG + chr4.3:4497797-4497816 None:intergenic 35.0%
AATCTTCGTCAAAACTCCAA+TGG + chr4.3:4493781-4493800 None:intergenic 35.0%
AATGCAGGTCAATTGAAATC+AGG + chr4.3:4494352-4494371 None:intergenic 35.0%
AATGTAAAATGAGAAGTCCC+AGG + chr4.3:4496091-4496110 None:intergenic 35.0%
ACAAATGACAAAAGTCTGGA+GGG + chr4.3:4495139-4495158 None:intergenic 35.0%
ACACACAAATGACAAAAGTC+TGG + chr4.3:4495143-4495162 None:intergenic 35.0%
AGGTCAAAACAATGGAAAAG+GGG - chr4.3:4493898-4493917 MS.gene55806:intron 35.0%
ATGAAAATCGTTGAAGAGAC+CGG + chr4.3:4493164-4493183 None:intergenic 35.0%
ATTCTCTGTTCCAAAACCAT+TGG - chr4.3:4495100-4495119 MS.gene55806:intron 35.0%
ATTGCCAGTAAATGAAAACC+AGG + chr4.3:4496849-4496868 None:intergenic 35.0%
CAAGGTCAAAACAATGGAAA+AGG - chr4.3:4493896-4493915 MS.gene55806:intron 35.0%
CAGATAAGCTCATTAGTCAT+AGG + chr4.3:4494210-4494229 None:intergenic 35.0%
CAGTGAAAAAGTGATCAAGT+AGG + chr4.3:4497514-4497533 None:intergenic 35.0%
CATATAGGTTAAAGTTCCCT+TGG - chr4.3:4494657-4494676 MS.gene55806:intron 35.0%
CATGTATGTATGGATGGTAA+TGG - chr4.3:4491979-4491998 MS.gene55806:intron 35.0%
CATTACCATCCATACATACA+TGG + chr4.3:4491981-4492000 None:intergenic 35.0%
CCGTACTTGACAATAAACAA+TGG + chr4.3:4497477-4497496 None:intergenic 35.0%
CTATGACTAATGAGCTTATC+TGG - chr4.3:4494208-4494227 MS.gene55806:CDS 35.0%
CTTAGCATATATTCTCCCAA+TGG - chr4.3:4492108-4492127 MS.gene55806:CDS 35.0%
GAACATTACCTTCTCAATGT+AGG + chr4.3:4492575-4492594 None:intergenic 35.0%
GAATGAGAGATGAAAGCAAA+AGG - chr4.3:4496966-4496985 MS.gene55806:intron 35.0%
GATTAAGAAGTTCCCAAGTT+TGG - chr4.3:4492889-4492908 MS.gene55806:intron 35.0%
GTTGAGTTAGTGTTAAGGTT+GGG - chr4.3:4494162-4494181 MS.gene55806:CDS 35.0%
GTTGCAATATCTTGATTAGC+CGG + chr4.3:4493456-4493475 None:intergenic 35.0%
TAAACACCTAGCTAACAGAA+TGG - chr4.3:4494781-4494800 MS.gene55806:intron 35.0%
TAAGGTTGGGTATCATTCTA+TGG - chr4.3:4494175-4494194 MS.gene55806:CDS 35.0%
TAGAATGGTTGTTAAGAGCA+CGG + chr4.3:4493236-4493255 None:intergenic 35.0%
TATAATCAGGAAACTTGGAG+AGG + chr4.3:4497569-4497588 None:intergenic 35.0%
TATTTGTAGGGATCGTTACT+CGG - chr4.3:4491636-4491655 MS.gene55806:intron 35.0%
TCATAGTTTAATACTCCCTC+CGG - chr4.3:4497184-4497203 MS.gene55806:intron 35.0%
TCTATGCAATTATCATTCGG+TGG + chr4.3:4492871-4492890 None:intergenic 35.0%
TGAGTTGTTTGGGTCAAAAA+CGG - chr4.3:4493064-4493083 MS.gene55806:intron 35.0%
TGTATGATGTGTGTTTGTCT+TGG - chr4.3:4495920-4495939 MS.gene55806:intron 35.0%
TGTCATCAAAAAAAGTCGCT+TGG - chr4.3:4496479-4496498 MS.gene55806:intron 35.0%
TGTGCATGACATTGAGAATA+TGG - chr4.3:4492543-4492562 MS.gene55806:intron 35.0%
TGTTTCCATGTATGTATGGA+TGG - chr4.3:4491973-4491992 MS.gene55806:intron 35.0%
TTGATAAGGATCCCTGAAAA+TGG + chr4.3:4495253-4495272 None:intergenic 35.0%
TTTCACTGAGCTAGGAAAAA+TGG - chr4.3:4497526-4497545 MS.gene55806:CDS 35.0%
TTTGAGAACTTATGTGGTAG+TGG - chr4.3:4495765-4495784 MS.gene55806:intron 35.0%
TTTGTCCTCATTACTGAATG+AGG - chr4.3:4497711-4497730 MS.gene55806:CDS 35.0%
! AAATCGGTGAATCTTTTCCT+CGG + chr4.3:4491731-4491750 None:intergenic 35.0%
! AGGGACAGTTGAAATTTGTT+TGG + chr4.3:4492082-4492101 None:intergenic 35.0%
! ATCTGACGGTTGATTTCTTT+CGG - chr4.3:4497023-4497042 MS.gene55806:intron 35.0%
! GAAGATTGATCTAATGGACA+AGG - chr4.3:4493794-4493813 MS.gene55806:intron 35.0%
! GAGATAAAGGGTTTTCTTTC+GGG - chr4.3:4496339-4496358 MS.gene55806:intron 35.0%
! GATTCTTATCTAAGGCGAAT+CGG - chr4.3:4497109-4497128 MS.gene55806:CDS 35.0%
! GGCAATTTTCTCATCAATAC+TGG - chr4.3:4496863-4496882 MS.gene55806:intron 35.0%
! TATAATTCTGGCTATTTCGC+CGG - chr4.3:4493434-4493453 MS.gene55806:intron 35.0%
! TCTTCAACGATTTTCATGGT+TGG - chr4.3:4493167-4493186 MS.gene55806:intron 35.0%
! TGAAATTTGTTTGGATCGAC+CGG + chr4.3:4492073-4492092 None:intergenic 35.0%
! TGTAAAGGTGTGAGTTGTTT+GGG - chr4.3:4493054-4493073 MS.gene55806:intron 35.0%
! TTGTAAAGGTGTGAGTTGTT+TGG - chr4.3:4493053-4493072 MS.gene55806:intron 35.0%
! TTTTGCTTATAGTGAACGGA+GGG - chr4.3:4497316-4497335 MS.gene55806:intron 35.0%
! TTTTGTAATGCTATGGGCAT+TGG - chr4.3:4496707-4496726 MS.gene55806:intron 35.0%
!! CTAGAAGTGCTTGAGATAAA+GGG - chr4.3:4496327-4496346 MS.gene55806:intron 35.0%
!! GAAATATTGAAAGTACCGGT+AGG + chr4.3:4493513-4493532 None:intergenic 35.0%
!! TACTGGCTTTGTTTATTCTC+AGG - chr4.3:4496880-4496899 MS.gene55806:intron 35.0%
!! TCTAGAAGTGCTTGAGATAA+AGG - chr4.3:4496326-4496345 MS.gene55806:intron 35.0%
!! TGGTTTAATTTGTGTAGCTG+CGG - chr4.3:4492011-4492030 MS.gene55806:intron 35.0%
!! TGTATGGATGGTAATGGTAA+TGG - chr4.3:4491985-4492004 MS.gene55806:intron 35.0%
!!! AGGAAAAGATTCACCGATTT+TGG - chr4.3:4491731-4491750 MS.gene55806:CDS 35.0%
!!! TGGACTTTTTTTATGGGACT+CGG + chr4.3:4492966-4492985 None:intergenic 35.0%
AACACCTAGCTAACAGAATG+GGG - chr4.3:4494783-4494802 MS.gene55806:intron 40.0%
AACACTACAACTGGTCGATA+TGG - chr4.3:4496991-4497010 MS.gene55806:intron 40.0%
AACTCACACCTTTACAACCT+GGG + chr4.3:4493050-4493069 None:intergenic 40.0%
ACAACTGCAAGAGTCACAAA+AGG + chr4.3:4492344-4492363 None:intergenic 40.0%
ACATTGTCACTAGAATTCCC+CGG + chr4.3:4496181-4496200 None:intergenic 40.0%
AGAGGAAAATCGTTGAATCG+TGG + chr4.3:4493127-4493146 None:intergenic 40.0%
AGCAAATACAGAGGGATAGT+TGG + chr4.3:4496298-4496317 None:intergenic 40.0%
AGCCTTCCATATTGAGGATA+TGG - chr4.3:4494325-4494344 MS.gene55806:intron 40.0%
AGGAAAATCGTTGAATCGTG+GGG + chr4.3:4493125-4493144 None:intergenic 40.0%
AGGATCCTCATTCAGTAATG+AGG + chr4.3:4497719-4497738 None:intergenic 40.0%
AGGGTTATGCTATAAACTCG+AGG + chr4.3:4494532-4494551 None:intergenic 40.0%
AGGTTAAAGTTCCCTTGGAT+CGG - chr4.3:4494662-4494681 MS.gene55806:intron 40.0%
ATAAAGGGATGCACTGAACT+TGG + chr4.3:4492986-4493005 None:intergenic 40.0%
ATGTCATGCACAATACTCTC+AGG + chr4.3:4492535-4492554 None:intergenic 40.0%
ATGTTGACATGATTGCTGCA+AGG - chr4.3:4494720-4494739 MS.gene55806:intron 40.0%
CAAAAACTGTGGCAAGTTCT+TGG - chr4.3:4493334-4493353 MS.gene55806:intron 40.0%
CAACTGCATCTATTTCAGCT+TGG + chr4.3:4497798-4497817 None:intergenic 40.0%
CACAAATGACAAAAGTCTGG+AGG + chr4.3:4495140-4495159 None:intergenic 40.0%
CCAGGTTCATTCGCTATTAA+AGG - chr4.3:4496026-4496045 MS.gene55806:intron 40.0%
CCTTAACACTAACTCAACCA+AGG + chr4.3:4494160-4494179 None:intergenic 40.0%
CCTTGGTTGAGTTAGTGTTA+AGG - chr4.3:4494157-4494176 MS.gene55806:CDS 40.0%
CCTTTAATAGCGAATGAACC+TGG + chr4.3:4496029-4496048 None:intergenic 40.0%
CGAGTCAAAAAACAAAACCC+AGG - chr4.3:4493030-4493049 MS.gene55806:intron 40.0%
CTAATTAGAGACTGAATGCC+TGG + chr4.3:4494981-4495000 None:intergenic 40.0%
CTGAAATAGATGCAGTTGCT+TGG - chr4.3:4497800-4497819 MS.gene55806:CDS 40.0%
GAAGAGAATCCCAAAGAGTA+GGG + chr4.3:4491461-4491480 None:intergenic 40.0%
GAATGAGGATCCTGCAATTA+TGG - chr4.3:4497726-4497745 MS.gene55806:CDS 40.0%
GAGAACAAGCTGACTGAATT+GGG - chr4.3:4493685-4493704 MS.gene55806:CDS 40.0%
GAGGAAAATCGTTGAATCGT+GGG + chr4.3:4493126-4493145 None:intergenic 40.0%
GATGAAACGGATAGAGAAAC+CGG - chr4.3:4492051-4492070 MS.gene55806:intron 40.0%
GCCTTCCATATTGAGGATAT+GGG - chr4.3:4494326-4494345 MS.gene55806:intron 40.0%
GGGCAAGTTATATGCAATCA+TGG - chr4.3:4495315-4495334 MS.gene55806:intron 40.0%
GGGTTATGCTATAAACTCGA+GGG + chr4.3:4494531-4494550 None:intergenic 40.0%
GGTTATGCTATAAACTCGAG+GGG + chr4.3:4494530-4494549 None:intergenic 40.0%
GGTTGAGTTAGTGTTAAGGT+TGG - chr4.3:4494161-4494180 MS.gene55806:CDS 40.0%
GTAATCAAGTCCAAGATTCC+AGG - chr4.3:4494960-4494979 MS.gene55806:intron 40.0%
GTTATGCTATAAACTCGAGG+GGG + chr4.3:4494529-4494548 None:intergenic 40.0%
GTTGAAATGTGCAGAGCTTT+CGG - chr4.3:4496240-4496259 MS.gene55806:intron 40.0%
GTTTGACAAGCAGCTTTCAA+TGG - chr4.3:4495553-4495572 MS.gene55806:intron 40.0%
TCATTCGCTATTAAAGGACC+TGG - chr4.3:4496032-4496051 MS.gene55806:intron 40.0%
TGAAGCAATACCCTGGTTTA+CGG - chr4.3:4496906-4496925 MS.gene55806:intron 40.0%
TGACATGTCTTTCCTGTACA+CGG - chr4.3:4492424-4492443 MS.gene55806:intron 40.0%
TGCTTATAATAGTGACCGGA+GGG + chr4.3:4497202-4497221 None:intergenic 40.0%
TGGACTTACATCAACAGCAT+CGG + chr4.3:4493823-4493842 None:intergenic 40.0%
TGGGTATCATTCTATGGCAT+TGG - chr4.3:4494181-4494200 MS.gene55806:CDS 40.0%
TGTTTATTGTCAAGTACGGG+AGG - chr4.3:4497478-4497497 MS.gene55806:CDS 40.0%
TTGAAATGTGCAGAGCTTTC+GGG - chr4.3:4496241-4496260 MS.gene55806:intron 40.0%
TTGCTTATAATAGTGACCGG+AGG + chr4.3:4497203-4497222 None:intergenic 40.0%
TTGTGAAGCTGCAAAACAAG+TGG + chr4.3:4491665-4491684 None:intergenic 40.0%
! ACTTTTGCTTGCTCAGATGT+TGG - chr4.3:4494625-4494644 MS.gene55806:intron 40.0%
! ATAGCCTTAAAACCGTGTAC+AGG + chr4.3:4492439-4492458 None:intergenic 40.0%
! CAACGATTTTCATGGTTGGA+GGG - chr4.3:4493171-4493190 MS.gene55806:intron 40.0%
! CTTTCCTGTACACGGTTTTA+AGG - chr4.3:4492432-4492451 MS.gene55806:intron 40.0%
! CTTTTAGGCGAAAGAACCAT+TGG - chr4.3:4493762-4493781 MS.gene55806:intron 40.0%
! GACAAGGTAACCAATGGTTT+TGG + chr4.3:4495113-4495132 None:intergenic 40.0%
! GGTCTCTTCAACGATTTTCA+TGG - chr4.3:4493163-4493182 MS.gene55806:intron 40.0%
! GGTCTGCAAAGAGTATATAC+AGG + chr4.3:4497686-4497705 None:intergenic 40.0%
! GTTTTGCTTATAGTGAACGG+AGG - chr4.3:4497315-4497334 MS.gene55806:intron 40.0%
! TCAACGATTTTCATGGTTGG+AGG - chr4.3:4493170-4493189 MS.gene55806:intron 40.0%
! TGCAATTATCATTCGGTGGT+AGG + chr4.3:4492867-4492886 None:intergenic 40.0%
! TTCTGGAAAATCCTCCGTAT+TGG - chr4.3:4491509-4491528 MS.gene55806:intron 40.0%
!! ACTGTTAGCCTTCCATATTG+AGG - chr4.3:4494319-4494338 MS.gene55806:intron 40.0%
!! AGCAAGGATTAATCGGTTTG+AGG + chr4.3:4494504-4494523 None:intergenic 40.0%
!! AGCATACTGCTTTTCGTACA+TGG + chr4.3:4493385-4493404 None:intergenic 40.0%
!! AGTACAGAAGCATCATCTTG+TGG - chr4.3:4492274-4492293 MS.gene55806:CDS 40.0%
!! GATGGTAATGGTAATGGTGA+TGG - chr4.3:4491991-4492010 MS.gene55806:intron 40.0%
!! GCATACTGCTTTTCGTACAT+GGG + chr4.3:4493384-4493403 None:intergenic 40.0%
!! GGAACCTGGTTTTCATTTAC+TGG - chr4.3:4496842-4496861 MS.gene55806:intron 40.0%
!! TTAGACAGGGTTGATGTTTG+AGG + chr4.3:4495859-4495878 None:intergenic 40.0%
!!! ACTTTTTTTATGGGACTCGG+TGG + chr4.3:4492963-4492982 None:intergenic 40.0%
!!! CTTTTTTTATGGGACTCGGT+GGG + chr4.3:4492962-4492981 None:intergenic 40.0%
!!! GATCACTTTTTCACTGAGCT+AGG - chr4.3:4497518-4497537 MS.gene55806:CDS 40.0%
!!! TTTTTTTATGGGACTCGGTG+GGG + chr4.3:4492961-4492980 None:intergenic 40.0%
AAAGTCTGGAGGGAAAGACA+AGG + chr4.3:4495129-4495148 None:intergenic 45.0%
ACAACTCCAGTCTCTTTGCA+AGG + chr4.3:4497765-4497784 None:intergenic 45.0%
ACACATACACGCCATCAAGA+TGG + chr4.3:4495375-4495394 None:intergenic 45.0%
AGACTGAATGCCTGGAATCT+TGG + chr4.3:4494973-4494992 None:intergenic 45.0%
CAAAAGGGCAACACTACAAC+TGG - chr4.3:4496982-4497001 MS.gene55806:intron 45.0%
CAAAGCTGTTAGTGAGACTC+TGG - chr4.3:4496059-4496078 MS.gene55806:intron 45.0%
CAACTCACACCTTTACAACC+TGG + chr4.3:4493051-4493070 None:intergenic 45.0%
CAATCTCACTCTGCGTATTC+AGG - chr4.3:4497389-4497408 MS.gene55806:intron 45.0%
CACTGAGCTAGGAAAAATGG+AGG - chr4.3:4497529-4497548 MS.gene55806:CDS 45.0%
CAGCTTCACAAGAGTGATGA+GGG - chr4.3:4491674-4491693 MS.gene55806:CDS 45.0%
CAGTAATGAGGACAAACGCT+TGG + chr4.3:4497707-4497726 None:intergenic 45.0%
CATCTTATTGCTCCAGAGCA+AGG - chr4.3:4495620-4495639 MS.gene55806:intron 45.0%
CTACGACGTTCCATAATTGC+AGG + chr4.3:4497739-4497758 None:intergenic 45.0%
CTATTTCAGCTTGGGCACTT+CGG + chr4.3:4497789-4497808 None:intergenic 45.0%
CTGGAGCAATAAGATGAGGT+TGG + chr4.3:4495616-4495635 None:intergenic 45.0%
CTTCCTCAAGATGTGGACAA+GGG - chr4.3:4497049-4497068 MS.gene55806:intron 45.0%
GAACAGATTTAGGCCCTGTT+TGG + chr4.3:4496628-4496647 None:intergenic 45.0%
GAAGCAATACCCTGGTTTAC+GGG - chr4.3:4496907-4496926 MS.gene55806:intron 45.0%
GATTTCTTACCTCGTGGATC+AGG - chr4.3:4491549-4491568 MS.gene55806:intron 45.0%
GCAATTATGGAACGTCGTAG+TGG - chr4.3:4497739-4497758 MS.gene55806:CDS 45.0%
GCAGCCGAACTGTATAATTC+TGG - chr4.3:4493422-4493441 MS.gene55806:intron 45.0%
GCCCATATCCTCAATATGGA+AGG + chr4.3:4494330-4494349 None:intergenic 45.0%
GGAAGAGAATCCCAAAGAGT+AGG + chr4.3:4491462-4491481 None:intergenic 45.0%
GGAGAACAAGCTGACTGAAT+TGG - chr4.3:4493684-4493703 MS.gene55806:CDS 45.0%
GGCAAAGATTTCTTACCTCG+TGG - chr4.3:4491543-4491562 MS.gene55806:intron 45.0%
GGGAAAGACAAGGTAACCAA+TGG + chr4.3:4495119-4495138 None:intergenic 45.0%
GGTCAAAAACGGTTCACCAT+GGG - chr4.3:4493075-4493094 MS.gene55806:intron 45.0%
TAGTGCACTCCCTACTCTTT+GGG - chr4.3:4491449-4491468 MS.gene55806:CDS 45.0%
TATGGAGTCTGGCTATCTGA+CGG - chr4.3:4497009-4497028 MS.gene55806:intron 45.0%
TCAGGCCCATATCCTCAATA+TGG + chr4.3:4494334-4494353 None:intergenic 45.0%
TGACACTCATCGATCTTCCT+GGG - chr4.3:4492369-4492388 MS.gene55806:intron 45.0%
TGCTTGCTCAGATGTTGGAA+GGG - chr4.3:4494630-4494649 MS.gene55806:intron 45.0%
TGTTCACAACACCGATCCAA+GGG + chr4.3:4494676-4494695 None:intergenic 45.0%
TTCTTGCAGTTCTTCTGCAC+AGG - chr4.3:4496770-4496789 MS.gene55806:intron 45.0%
TTGACACTCATCGATCTTCC+TGG - chr4.3:4492368-4492387 MS.gene55806:intron 45.0%
TTGCTTGCTCAGATGTTGGA+AGG - chr4.3:4494629-4494648 MS.gene55806:intron 45.0%
! ATAACTTGCCCTGCATGTGA+TGG + chr4.3:4495306-4495325 None:intergenic 45.0%
! CACTAACAGCTTTGTGAACC+AGG + chr4.3:4496053-4496072 None:intergenic 45.0%
! CAGGATTTGAAGCAATACCC+TGG - chr4.3:4496899-4496918 MS.gene55806:intron 45.0%
! GAGTGGATTCAATGAGACGA+CGG + chr4.3:4495649-4495668 None:intergenic 45.0%
! TAATTTGTGTAGCTGCGGTG+AGG - chr4.3:4492016-4492035 MS.gene55806:intron 45.0%
! TGTTGGAAGGGAGAGCATAT+AGG - chr4.3:4494642-4494661 MS.gene55806:intron 45.0%
!! GAGAACTTATGTGGTAGTGG+TGG - chr4.3:4495768-4495787 MS.gene55806:intron 45.0%
!! TCCGTATTGGAGAGTGTTGT+CGG - chr4.3:4491522-4491541 MS.gene55806:intron 45.0%
!! TCTCTAGTGTTGGTTTCCCA+TGG + chr4.3:4493094-4493113 None:intergenic 45.0%
!! TGAGACTCTGGTTTGTTCCT+GGG - chr4.3:4496071-4496090 MS.gene55806:intron 45.0%
!! TGCTCTGGAGCAATAAGATG+AGG + chr4.3:4495620-4495639 None:intergenic 45.0%
!!! GGAAGCGTTTTCTCTAGTGT+TGG + chr4.3:4493104-4493123 None:intergenic 45.0%
!!! TGGGCATTGGCAATGACTTT+TGG - chr4.3:4496720-4496739 MS.gene55806:intron 45.0%
!!! TATTTTTTTTTTATACAATT+GGG - chr4.3:4491572-4491591 MS.gene55806:intron 5.0%
AATCGTTGAAGAGACCGGAG+TGG + chr4.3:4493159-4493178 None:intergenic 50.0%
ACTGCTTTGCCATCACATGC+AGG - chr4.3:4495294-4495313 MS.gene55806:intron 50.0%
AGATTCACCGTGGTCACCTA+AGG + chr4.3:4491430-4491449 None:intergenic 50.0%
CAACTGGTCGATATGGAGTC+TGG - chr4.3:4496998-4497017 MS.gene55806:intron 50.0%
CAGACCCCATTCTGTTAGCT+AGG + chr4.3:4494790-4494809 None:intergenic 50.0%
CTAGTGCACTCCCTACTCTT+TGG - chr4.3:4491448-4491467 MS.gene55806:CDS 50.0%
CTGAGTTTCTTCACCTTCCG+AGG - chr4.3:4491711-4491730 MS.gene55806:CDS 50.0%
CTGCTTTGCCATCACATGCA+GGG - chr4.3:4495295-4495314 MS.gene55806:intron 50.0%
CTGTTCACAACACCGATCCA+AGG + chr4.3:4494677-4494696 None:intergenic 50.0%
CTTTCCCAAACGAGCCAGTT+CGG + chr4.3:4495027-4495046 None:intergenic 50.0%
GACAACACTCTCCAATACGG+AGG + chr4.3:4491523-4491542 None:intergenic 50.0%
GCAATGAAACAGCAGACCAG+AGG + chr4.3:4496746-4496765 None:intergenic 50.0%
GCAGCTTCACAAGAGTGATG+AGG - chr4.3:4491673-4491692 MS.gene55806:CDS 50.0%
GCCGACAACACTCTCCAATA+CGG + chr4.3:4491526-4491545 None:intergenic 50.0%
GCTTCCTCAAGATGTGGACA+AGG - chr4.3:4497048-4497067 MS.gene55806:intron 50.0%
GGGGGTGAGCAAGGATTAAT+CGG + chr4.3:4494511-4494530 None:intergenic 50.0%
GGGTCAAAAACGGTTCACCA+TGG - chr4.3:4493074-4493093 MS.gene55806:intron 50.0%
GGTTCGCTCCTACATTGAGA+AGG - chr4.3:4492564-4492583 MS.gene55806:intron 50.0%
TACCGGTAGGATCCACTTCA+CGG + chr4.3:4493500-4493519 None:intergenic 50.0%
TCAATTTCCTACAGGCGACC+TGG - chr4.3:4495470-4495489 MS.gene55806:intron 50.0%
TCGGAAGCTTCCTCAAGATG+TGG - chr4.3:4497042-4497061 MS.gene55806:intron 50.0%
TCTGGCGAAGATGCTCTCAA+AGG - chr4.3:4494814-4494833 MS.gene55806:intron 50.0%
! AACCAAGGAGCCTGACTTGA+TGG + chr4.3:4494145-4494164 None:intergenic 50.0%
! CGGAGGATTTTCCAGAACTC+TGG + chr4.3:4491506-4491525 None:intergenic 50.0%
! CGGTGAATCTTTTCCTCGGA+AGG + chr4.3:4491727-4491746 None:intergenic 50.0%
! GCAACCTTTTCAGAGCAGCA+GGG + chr4.3:4495532-4495551 None:intergenic 50.0%
! TAGTGGCCTTGCAAAGAGAC+TGG - chr4.3:4497756-4497775 MS.gene55806:CDS 50.0%
! TGCAACCTTTTCAGAGCAGC+AGG + chr4.3:4495533-4495552 None:intergenic 50.0%
! TGCTGGTGCTCTTATTTCGC+CGG - chr4.3:4496159-4496178 MS.gene55806:intron 50.0%
! TGGCAATGACTTTTGGCCTC+TGG - chr4.3:4496727-4496746 MS.gene55806:intron 50.0%
!! GAAACCGAACTGGCTCGTTT+GGG - chr4.3:4495020-4495039 MS.gene55806:intron 50.0%
!! GTGAGACTCTGGTTTGTTCC+TGG - chr4.3:4496070-4496089 MS.gene55806:intron 50.0%
!! TGAAACCGAACTGGCTCGTT+TGG - chr4.3:4495019-4495038 MS.gene55806:intron 50.0%
AAGCCTGTTGCAGCTGATGC+TGG - chr4.3:4495044-4495063 MS.gene55806:intron 55.0%
ACCGGTAGGATCCACTTCAC+GGG + chr4.3:4493499-4493518 None:intergenic 55.0%
AGAACTCTGGCCACCAACGA+CGG + chr4.3:4491493-4491512 None:intergenic 55.0%
AGACGACGGTATCCTTGCTC+TGG + chr4.3:4495635-4495654 None:intergenic 55.0%
AGCCTGTTGCAGCTGATGCT+GGG - chr4.3:4495045-4495064 MS.gene55806:intron 55.0%
ATTTCCTACAGGCGACCTGG+AGG - chr4.3:4495473-4495492 MS.gene55806:intron 55.0%
CAAAGAGCTTGCACCGCCTT+AGG - chr4.3:4491411-4491430 MS.gene55806:CDS 55.0%
CAACCTCAGCCCGTAAACCA+GGG + chr4.3:4496919-4496938 None:intergenic 55.0%
CAGAATGGGGTCTGAGCATC+TGG - chr4.3:4494796-4494815 MS.gene55806:intron 55.0%
CCACCCTTGTCCACATCTTG+AGG + chr4.3:4497055-4497074 None:intergenic 55.0%
CCTCAAGATGTGGACAAGGG+TGG - chr4.3:4497052-4497071 MS.gene55806:intron 55.0%
CGATCTTCCTGGGCTTACGA+AGG - chr4.3:4492379-4492398 MS.gene55806:intron 55.0%
CTAAGGCGGTGCAAGCTCTT+TGG + chr4.3:4491413-4491432 None:intergenic 55.0%
CTCCATCAAGTCAGGCTCCT+TGG - chr4.3:4494140-4494159 MS.gene55806:intron 55.0%
GGAGTGCACTAGATTCACCG+TGG + chr4.3:4491440-4491459 None:intergenic 55.0%
TAAACTCGAGGGGGTGAGCA+AGG + chr4.3:4494520-4494539 None:intergenic 55.0%
TACCGCATCAACAGCTGCCT+CGG + chr4.3:4495693-4495712 None:intergenic 55.0%
TCATCCGCCTCCATCAAGTC+AGG - chr4.3:4494132-4494151 MS.gene55806:intron 55.0%
TCCCGTGAAGTGGATCCTAC+CGG - chr4.3:4493495-4493514 MS.gene55806:intron 55.0%
TTCACCGTGGTCACCTAAGG+CGG + chr4.3:4491427-4491446 None:intergenic 55.0%
TTGTGTAGCTGCGGTGAGGA+AGG - chr4.3:4492020-4492039 MS.gene55806:intron 55.0%
! ATACCCTGGTTTACGGGCTG+AGG - chr4.3:4496913-4496932 MS.gene55806:intron 55.0%
! CAAGGAGCCTGACTTGATGG+AGG + chr4.3:4494142-4494161 None:intergenic 55.0%
! CTGGTGCTCTTATTTCGCCG+GGG - chr4.3:4496161-4496180 MS.gene55806:intron 55.0%
! CTGGTTTACGGGCTGAGGTT+GGG - chr4.3:4496918-4496937 MS.gene55806:intron 55.0%
! GCTGGTGCTCTTATTTCGCC+GGG - chr4.3:4496160-4496179 MS.gene55806:intron 55.0%
! TGGTTTACGGGCTGAGGTTG+GGG - chr4.3:4496919-4496938 MS.gene55806:intron 55.0%
! TTTTCAGAGCAGCAGGGAGC+TGG + chr4.3:4495526-4495545 None:intergenic 55.0%
!! AGCTCCCTGCTGCTCTGAAA+AGG - chr4.3:4495525-4495544 MS.gene55806:intron 55.0%
ACAGCGACCTTCGTAAGCCC+AGG + chr4.3:4492389-4492408 None:intergenic 60.0%
ACCCCAGCATCAGCTGCAAC+AGG + chr4.3:4495050-4495069 None:intergenic 60.0%
ATCACCTCCAGGTCGCCTGT+AGG + chr4.3:4495480-4495499 None:intergenic 60.0%
CATCAACAGCTGCCTCGGCA+GGG + chr4.3:4495688-4495707 None:intergenic 60.0%
CCAACCTCAGCCCGTAAACC+AGG + chr4.3:4496920-4496939 None:intergenic 60.0%
CCTCTGCGTGCTTACCACTC+CGG - chr4.3:4493142-4493161 MS.gene55806:CDS 60.0%
CTTCCTGCTATCGCCGTCGT+TGG - chr4.3:4491477-4491496 MS.gene55806:CDS 60.0%
GCCTGTTGCAGCTGATGCTG+GGG - chr4.3:4495046-4495065 MS.gene55806:intron 60.0%
GGGCTTACGAAGGTCGCTGT+AGG - chr4.3:4492389-4492408 MS.gene55806:intron 60.0%
TGCACCGCCTTAGGTGACCA+CGG - chr4.3:4491420-4491439 MS.gene55806:CDS 60.0%
TGCCGAGGCAGCTGTTGATG+CGG - chr4.3:4495688-4495707 MS.gene55806:intron 60.0%
! CCTGGTTTACGGGCTGAGGT+TGG - chr4.3:4496917-4496936 MS.gene55806:intron 60.0%
! GGAGCCTGACTTGATGGAGG+CGG + chr4.3:4494139-4494158 None:intergenic 60.0%
!! GTCGTTGGTGGCCAGAGTTC+TGG - chr4.3:4491492-4491511 MS.gene55806:intron 60.0%
CCACCAACGACGGCGATAGC+AGG + chr4.3:4491483-4491502 None:intergenic 65.0%
CCGGAGTGGTAAGCACGCAG+AGG + chr4.3:4493145-4493164 None:intergenic 65.0%
CCTGCTATCGCCGTCGTTGG+TGG - chr4.3:4491480-4491499 MS.gene55806:CDS 65.0%
GCATCAACAGCTGCCTCGGC+AGG + chr4.3:4495689-4495708 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 4491378 4497831 4491378 ID=MS.gene55806
chr4.3 mRNA 4491378 4497831 4491378 ID=MS.gene55806.t1;Parent=MS.gene55806
chr4.3 exon 4497639 4497831 4497639 ID=MS.gene55806.t1.exon1;Parent=MS.gene55806.t1
chr4.3 CDS 4497639 4497831 4497639 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4497457 4497564 4497457 ID=MS.gene55806.t1.exon2;Parent=MS.gene55806.t1
chr4.3 CDS 4497457 4497564 4497457 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4497080 4497181 4497080 ID=MS.gene55806.t1.exon3;Parent=MS.gene55806.t1
chr4.3 CDS 4497080 4497181 4497080 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4496799 4496849 4496799 ID=MS.gene55806.t1.exon4;Parent=MS.gene55806.t1
chr4.3 CDS 4496799 4496849 4496799 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4496624 4496685 4496624 ID=MS.gene55806.t1.exon5;Parent=MS.gene55806.t1
chr4.3 CDS 4496624 4496685 4496624 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4495693 4495783 4495693 ID=MS.gene55806.t1.exon6;Parent=MS.gene55806.t1
chr4.3 CDS 4495693 4495783 4495693 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4495376 4495440 4495376 ID=MS.gene55806.t1.exon7;Parent=MS.gene55806.t1
chr4.3 CDS 4495376 4495440 4495376 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4494374 4494568 4494374 ID=MS.gene55806.t1.exon8;Parent=MS.gene55806.t1
chr4.3 CDS 4494374 4494568 4494374 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4494142 4494261 4494142 ID=MS.gene55806.t1.exon9;Parent=MS.gene55806.t1
chr4.3 CDS 4494142 4494261 4494142 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4493823 4493893 4493823 ID=MS.gene55806.t1.exon10;Parent=MS.gene55806.t1
chr4.3 CDS 4493823 4493893 4493823 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4493500 4493725 4493500 ID=MS.gene55806.t1.exon11;Parent=MS.gene55806.t1
chr4.3 CDS 4493500 4493725 4493500 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4493129 4493179 4493129 ID=MS.gene55806.t1.exon12;Parent=MS.gene55806.t1
chr4.3 CDS 4493129 4493179 4493129 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4492079 4492307 4492079 ID=MS.gene55806.t1.exon13;Parent=MS.gene55806.t1
chr4.3 CDS 4492079 4492307 4492079 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4491659 4491798 4491659 ID=MS.gene55806.t1.exon14;Parent=MS.gene55806.t1
chr4.3 CDS 4491659 4491798 4491659 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
chr4.3 exon 4491378 4491506 4491378 ID=MS.gene55806.t1.exon15;Parent=MS.gene55806.t1
chr4.3 CDS 4491378 4491506 4491378 ID=cds.MS.gene55806.t1;Parent=MS.gene55806.t1
Gene Sequence

>MS.gene55806

ATGGAAAACCTAATCTCATTAGTCAACAAAATCCAAAGAGCTTGCACCGCCTTAGGTGACCACGGTGAATCTAGTGCACTCCCTACTCTTTGGGATTCTCTTCCTGCTATCGCCGTCGTTGGTGGCCAGAGTTCTGGAAAATCCTCCGTATTGGAGAGTGTTGTCGGCAAAGATTTCTTACCTCGTGGATCAGGTATTTTTTTTTTATACAATTGGGGATTGTGAATTGTGATTTGAAATTTGTTCATAATTGATGCGTATTTGTAGGGATCGTTACTCGGAGACCACTTGTTTTGCAGCTTCACAAGAGTGATGAGGGAACAAGAGAATATGCTGAGTTTCTTCACCTTCCGAGGAAAAGATTCACCGATTTTGGTAACTTTTCTTTTGTCACTCTAGTCTTCGCGTTTTTTCCCCCATTGATTTTACTGATTTGAATGTTATTGACTCTATTTGACCATTTTCAAAATGTTTCTATATATGTATGAGTTTTTGTGTTTTTTTCTTCTTTTTCTCATTGCTATTTAGTAAATGATCGTGCTATTTAGATTTTACTGATTCAAATGTTTTTGACTCTATTTGACCGATTTTGAAATGTTTCCATGTATGTATGGATGGTAATGGTAATGGTGATGGTTTAATTTGTGTAGCTGCGGTGAGGAAGGAAATTCAAGATGAAACGGATAGAGAAACCGGTCGATCCAAACAAATTTCAACTGTCCCTATTCATCTTAGCATATATTCTCCCAATGGTACGTTTGAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATTATTATCTATTGTTGTACTGCATCCCTTATTCTTATATATAATATGTAGATCTGTCGGTAACAATGCTTAAGTACAGAAGCATCATCTTGTGGTCTATTTGTTTGCTCATTTTATTCAAGTGTTGAATTATGGGTGACCTTTTGTGACTCTTGCAGTTGTTAACTTGACACTCATCGATCTTCCTGGGCTTACGAAGGTCGCTGTAGGTATGCAATCAATTGACATGTCTTTCCTGTACACGGTTTTAAGGCTATTTAGTGTGAATTTTATTTTCGTAATGATGTACGAGATGCTCATAGATATTTTTGCATAACTGTAGATGGGCAACCTGAGAGTATTGTGCATGACATTGAGAATATGGTTCGCTCCTACATTGAGAAGGTAATGTTCATTCAAGTACTAAAGCTTTTAATAGGAAATAAAATATTTTCAGGATCAACTTATATGGTTTAATTTTTAAAAATAAATAACTAAGAAAAATATGGAGTGTAAGATCGTTTGAATTGTAGGATTCCCACAAATAGACAAAATTATAGAGATAAATAACTGAGAAAAATAACCTTTACATAATCATCCTATAGAAACATAACTTTTATCACTGATTTAATCATAAAGATGAGAGGTTGACCGAAACAAATATAGATTTTTTTTTATTAATTCCTACCACCGAATGATAATTGCATAGATTAAGAAGTTCCCAAGTTTGGAAGTAATTTCTCAACTAAAACCCAAGTCCCTATATTTAAATAAAAACCCCACCGAGTCCCATAAAAAAAGTCCAAGTTCAGTGCATCCCTTTATGCAATGAAAAAACAGATCAACTTTCGAGTCAAAAAACAAAACCCAGGTTGTAAAGGTGTGAGTTGTTTGGGTCAAAAACGGTTCACCATGGGAAACCAACACTAGAGAAAACGCTTCCCCACGATTCAACGATTTTCCTCTGCGTGCTTACCACTCCGGTCTCTTCAACGATTTTCATGGTTGGAGGGAGAAAAAACACGTGAGATCTAATGATATCACAATCTTAACCGTGCTCTTAACAACCATTCTAGAAAGTTTATCTTGCAAAGTTCTCTGATGTGCAAAAATGACGTGCTTACCTTGTATTATGTATGAACATCATTAATTTCAAAAACTGTGGCAAGTTCTTGGTATAACATTTGTGTAAAAATTAGGCCCATGTACGAAAAGCAGTATGCTGAAATTGATGTTATTTTGCAGCCGAACTGTATAATTCTGGCTATTTCGCCGGCTAATCAAGATATTGCAACATCTGATGCAATTAAAATTTCCCGTGAAGTGGATCCTACCGGTACTTTCAATATTTCCTTTTCTTTGGCTTTTAGCGTTCCCCATTTTGAATGCATTTAACGAATCTTTTTATGGTTTGTTGAGAATCAATAATTCAATATTTCAATATGTTGTATATTTACACCGCAGATTTAACCATTATTCTAACTTTTTGCACTGTTGATTTTTGGAGAACAAGCTGACTGAATTGGGCAACATTAAGTAAATAGTTTGATGGTTTTCTAATCATTGGTTTATTTGTTTCAACTTTTAGGCGAAAGAACCATTGGAGTTTTGACGAAGATTGATCTAATGGACAAGGGTACCGATGCTGTTGATGTAAGTCCAATTATTTTTTTTATTTTAATATAATAGCATGCAAACATGGTTATAGTTTGTTACAAGGTCAAAACAATGGAAAAGGGGTCGAAGATCTTGCATATGTCTACTATTATTATTGTTGTTGTTGTTATTATTATTATTACTATCATCATCATCATCATCATTATTATCTGTGAACTCTGCAACTTAGTGTTAGAATATTGGGTCCATAATCCCAATTATGTATATCTATATAACCTTGTAAATACTCATTCTTTGCAAGTAGTAAAATATAATACATACAATTTTACATGGTTCATCCGCCTCCATCAAGTCAGGCTCCTTGGTTGAGTTAGTGTTAAGGTTGGGTATCATTCTATGGCATTGGTCACCTATGACTAATGAGCTTATCTGGATCAAGCAGCTAACTGATGAGTAGAAATTTACAGAGGTCTCTCATATGAAGTTGCTTTTTGATAATTATTAGTTGCTCTGTCAAAATAACTGTTAGCCTTCCATATTGAGGATATGGGCCTGATTTCAATTGACCTGCATTCTTATTTATTCTCTATGAGAATAACTTGTTAAGTATAGAATCTAGACATAGTTTCATATTTATAAGAACTAAGGAGTTGGGTGAATTGTTCATAAAGCTTGAAATTTCTCGTGTTAAAGTGTCTTTCTGCCTCAAACCGATTAATCCTTGCTCACCCCCTCGAGTTTATAGCATAACCCTGATAATGATCAGTTGTTTTATTCTAAGAAGCTATAAAAGTAAATACTTGATTCTGTACTGATCCATGATATATACTTTTGCTTGCTCAGATGTTGGAAGGGAGAGCATATAGGTTAAAGTTCCCTTGGATCGGTGTTGTGAACAGATCACAAGCAGACATAAACAAGAATGTTGACATGATTGCTGCAAGGCGTAGAGAACGTGAATACTTTAATAGTACTCCTGAATATAAACACCTAGCTAACAGAATGGGGTCTGAGCATCTGGCGAAGATGCTCTCAAAGGTACATCAAAAACAATATATAGCATCATTTGCTGAAATATTAGGTGTTCATTTTTATGTAAATCTGTTTTAGTAGCTTCCAACAACTAAAGTCATATTGATTTTTATATCAGCATTTGGAGACAGTAATCAAGTCCAAGATTCCAGGCATTCAGTCTCTAATTAGCAAAACAATAAATGAAATTGAAACCGAACTGGCTCGTTTGGGAAAGCCTGTTGCAGCTGATGCTGGGGTAAGTTTGCTCTTATTTTCTAGCCATTTTAAATTCTCTGTTCCAAAACCATTGGTTACCTTGTCTTTCCCTCCAGACTTTTGTCATTTGTGTGTGTTTATACAGGCATTCGTCCCACATAATATCCATTTATTTTGATGAACTTAAATATTGATGTGGTGATGATTGGATAATATGACACTCCATTTTCAGGGATCCTTATCAAGTGTTTTCATGTTGACTAATGACTGCTTTGCCATCACATGCAGGGCAAGTTATATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTCAAAGACCATCTTGATGGCGTGTATGTGTTATACTTTTCTGATTGAAGTTAACATTTTACTGTGTAATTCGTTTGTTTTTTCATGCTGTATTTCCTTATTTGTGTCAATTTCCTACAGGCGACCTGGAGGTGATAAAATTTATAACGTCTTTGACAACCAGCTCCCTGCTGCTCTGAAAAGGTTGCAGTTTGACAAGCAGCTTTCAATGGAAAATATAAGGAAACTTATTACAGAAGCTGATGGATACCAACCTCATCTTATTGCTCCAGAGCAAGGATACCGTCGTCTCATTGAATCCACTCTAGTTACAATCAGGGGCCCTGCCGAGGCAGCTGTTGATGCGGTATGTTTTTCACAAGAGAATTATCAATAGCAATTGAAATTTTGTACCCAATTTTTTTGAGAACTTATGTGGTAGTGGTGGTGTGCTATAAAGAATGTGTTGAAATAAAATACTTGATTAAAGAGAAAAAAAAAAAAAAACTTTAGCCTCAAACATCAACCCTGTCTAAAAGCTGTAAATTAGTGATTTTTCTAATTGGATACTTTTTTATGTATGATGTGTGTTTGTCTTGGTTAATCTACTTAAGCATTCAGCTTTAATCTTTTGCTGATCTCTTTGGTCATACTCATTGAATTCTTGTTTTGAATTGATTCTTCCAGGTTCATTCGCTATTAAAGGACCTGGTTCACAAAGCTGTTAGTGAGACTCTGGTTTGTTCCTGGGACTTCTCATTTTACATTCCAGTTTTATTTCTTGCTGCTATATTTGTTCTAAATAAATTGTATAATTGCTGGTGCTCTTATTTCGCCGGGGAATTCTAGTGACAATGTTCATTTGGAAACAGCATTTGAATGGCTTCAATTTTAGAAGTTGAAATGTGCAGAGCTTTCGGGTTTTCTTTGATTGAGTATTAAGATATTTGTTCCAACTATCCCTCTGTATTTGCTTTGAGAATTCTAGAAGTGCTTGAGATAAAGGGTTTTCTTTCGGGTTTTCTTCGATTTTTTGTCCCTATAAATTTTCTGCTTTCAACTTCAGTACCTGCTTTTTTTACAAAAGTTCATGTTTTGTGTTCCAAATGACTTTTTTTAAGGTCTTATCAGTGATATGTCATCAAAAAAAGTCGCTTGGAACATGAAACGTGAACTTTTGTAAAAAACAGGAATTGAAATTGAAACCAGAAATTTAGAGGACCAAAAATCAAAGGAAAATTTTGGAGGGACGAAAACTGAAAGCTGCAAATAAGCTGTTTATCCAAACAGGGCCTAAATCTGTTCATTATCGAGTTCAAGTGTTAAAATAAAATATGTAACTGAAATAGTGATGTAGGTTATCTTTTTGTAATGCTATGGGCATTGGCAATGACTTTTGGCCTCTGGTCTGCTGTTTCATTGCTACTTTCTTGCAGTTCTTCTGCACAGGTTTACTTGCCCTTTTTGTAATAGTTGTTCATGATTAAATTAATACAGTTGGAACCTGGTTTTCATTTACTGGCAATTTTCTCATCAATACTGGCTTTGTTTATTCTCAGGATTTGAAGCAATACCCTGGTTTACGGGCTGAGGTTGGGGCTGCAGCTATTGATTCGTTAGATAGAATGAGAGATGAAAGCAAAAGGGCAACACTACAACTGGTCGATATGGAGTCTGGCTATCTGACGGTTGATTTCTTTCGGAAGCTTCCTCAAGATGTGGACAAGGGTGGCAACCCCACTCATTCAATTTTCGATAGATATAATGATTCTTATCTAAGGCGAATCGGTATGTCTTATTAAAAGTAGTCTCAAACTTGAACGGACAATATATGGTTGCTCTCATAGTTTAATACTCCCTCCGGTCACTATTATAAGCAAAACTTCACTTTTTAGATACATTGAATAATTAATGTATCTAGTCTTTATTATAAACTAGATACATTAATTATCCAATATATTTAAAAAGTGAAGTTTTGCTTATAGTGAACGGAGGGAGTATAGTATATCATCTGTCATTGTTAAATGGAACTTAAAACTGACTGTTCAATCTCACTCTGCGTATTCAGGAACAACAATTTTGTCATATGTCAATATGGTCTGCGCTACTCTACGACATTCAATTCCGAAGTCCATTGTTTATTGTCAAGTACGGGAGGCAAAAAGAAGCCTACTTGATCACTTTTTCACTGAGCTAGGAAAAATGGAGGTGAGAATAAATTTGCCTCTCCAAGTTTCCTGATTATACTTTTCATTTATTCAAAAAACTTGCTTAAAAGCAAAAAATTATTGAGCTGCTTTTAATTTAGTTTTTAAAGTTAAATAAATTAAGCGTTGTCTGCCTGTATATACTCTTTGCAGACCAAGCGTTTGTCCTCATTACTGAATGAGGATCCTGCAATTATGGAACGTCGTAGTGGCCTTGCAAAGAGACTGGAGTTGTACCGAAGTGCCCAAGCTGAAATAGATGCAGTTGCTTGGTCTAAGTAA
Protein sequence

>MS.gene55806.t1

MENLISLVNKIQRACTALGDHGESSALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLHKSDEGTREYAEFLHLPRKRFTDFAAVRKEIQDETDRETGRSKQISTVPIHLSIYSPNVVNLTLIDLPGLTKVAVDGQPESIVHDIENMVRSYIEKPNCIILAISPANQDIATSDAIKISREVDPTGERTIGVLTKIDLMDKGTDAVDMLEGRAYRLKFPWIGVVNRSQADINKNVDMIAARRREREYFNSTPEYKHLANRMGSEHLAKMLSKHLETVIKSKIPGIQSLISKTINEIETELARLGKPVAADAGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHLIAPEQGYRRLIESTLVTIRGPAEAAVDAVHSLLKDLVHKAVSETLDLKQYPGLRAEVGAAAIDSLDRMRDESKRATLQLVDMESGYLTVDFFRKLPQDVDKGGNPTHSIFDRYNDSYLRRIGTTILSYVNMVCATLRHSIPKSIVYCQVREAKRSLLDHFFTELGKMETKRLSSLLNEDPAIMERRSGLAKRLELYRSAQAEIDAVAWSK