Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57124.t1 | XP_003618323.2 | 84.9 | 577 | 82 | 1 | 224 | 800 | 6 | 577 | 4.80E-275 | 957.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57124.t1 | Q4F883 | 37.4 | 580 | 277 | 18 | 228 | 783 | 9 | 526 | 1.1e-83 | 312.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57124.t1 | G7KIV1 | 84.9 | 577 | 82 | 1 | 224 | 800 | 6 | 577 | 3.4e-275 | 957.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050148 | MS.gene57124 | 0.803871 | 2.83E-49 | -1.69E-46 |
MS.gene050645 | MS.gene57124 | 0.85686 | 2.42E-62 | -1.69E-46 |
MS.gene054892 | MS.gene57124 | 0.809393 | 1.93E-50 | -1.69E-46 |
MS.gene054893 | MS.gene57124 | 0.803397 | 3.55E-49 | -1.69E-46 |
MS.gene05861 | MS.gene57124 | 0.81354 | 2.43E-51 | -1.69E-46 |
MS.gene05969 | MS.gene57124 | 0.806864 | 6.69E-50 | -1.69E-46 |
MS.gene060412 | MS.gene57124 | 0.827268 | 1.72E-54 | -1.69E-46 |
MS.gene061047 | MS.gene57124 | 0.805637 | 1.21E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57124.t1 | MTR_6g007980 | 84.922 | 577 | 81 | 2 | 224 | 800 | 6 | 576 | 0.0 | 968 |
MS.gene57124.t1 | MTR_6g007980 | 84.922 | 577 | 82 | 1 | 224 | 800 | 6 | 577 | 0.0 | 963 |
MS.gene57124.t1 | MTR_6g007980 | 84.775 | 578 | 82 | 2 | 224 | 800 | 6 | 578 | 0.0 | 959 |
MS.gene57124.t1 | MTR_3g467360 | 54.889 | 583 | 242 | 9 | 224 | 799 | 12 | 580 | 0.0 | 614 |
MS.gene57124.t1 | MTR_3g467360 | 54.811 | 582 | 242 | 9 | 225 | 799 | 7 | 574 | 0.0 | 612 |
MS.gene57124.t1 | MTR_6g007975 | 57.167 | 586 | 222 | 16 | 225 | 799 | 9 | 576 | 0.0 | 610 |
MS.gene57124.t1 | MTR_6g008015 | 54.389 | 581 | 240 | 12 | 225 | 795 | 9 | 574 | 0.0 | 598 |
MS.gene57124.t1 | MTR_6g008055 | 55.312 | 593 | 232 | 16 | 220 | 799 | 2 | 574 | 0.0 | 580 |
MS.gene57124.t1 | MTR_6g007985 | 54.425 | 452 | 189 | 6 | 348 | 795 | 59 | 497 | 2.75e-165 | 488 |
MS.gene57124.t1 | MTR_0286s0040 | 47.826 | 460 | 147 | 12 | 348 | 799 | 12 | 386 | 5.82e-123 | 375 |
MS.gene57124.t1 | MTR_3g467350 | 46.914 | 405 | 182 | 7 | 225 | 621 | 7 | 386 | 1.37e-102 | 325 |
MS.gene57124.t1 | MTR_3g467350 | 54.455 | 101 | 42 | 2 | 699 | 799 | 385 | 481 | 9.82e-25 | 108 |
MS.gene57124.t1 | MTR_7g045450 | 64.000 | 175 | 43 | 1 | 1 | 175 | 102 | 256 | 1.44e-65 | 219 |
MS.gene57124.t1 | MTR_6g073570 | 64.000 | 175 | 43 | 1 | 1 | 175 | 102 | 256 | 1.44e-65 | 219 |
MS.gene57124.t1 | MTR_7g074180 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 7.02e-59 | 203 |
MS.gene57124.t1 | MTR_5g030110 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.24e-58 | 201 |
MS.gene57124.t1 | MTR_2g007410 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.24e-58 | 201 |
MS.gene57124.t1 | MTR_7g024060 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_6g087820 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_5g081190 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_5g091480 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_5g056290 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_3g031190 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_2g005490 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_2g010570 | 50.481 | 208 | 92 | 2 | 1 | 208 | 102 | 298 | 3.51e-58 | 201 |
MS.gene57124.t1 | MTR_8g446640 | 50.980 | 204 | 89 | 2 | 1 | 204 | 83 | 275 | 4.98e-58 | 200 |
MS.gene57124.t1 | MTR_7g451880 | 49.519 | 208 | 94 | 2 | 1 | 208 | 103 | 299 | 8.87e-58 | 200 |
MS.gene57124.t1 | MTR_4g058660 | 49.038 | 208 | 95 | 2 | 1 | 208 | 102 | 298 | 8.71e-57 | 197 |
MS.gene57124.t1 | MTR_2g010270 | 47.926 | 217 | 93 | 3 | 1 | 208 | 83 | 288 | 5.58e-56 | 195 |
MS.gene57124.t1 | MTR_1g105785 | 35.849 | 265 | 148 | 3 | 1 | 248 | 102 | 361 | 4.99e-52 | 191 |
MS.gene57124.t1 | MTR_7g110100 | 35.714 | 266 | 149 | 3 | 1 | 249 | 102 | 362 | 1.54e-50 | 186 |
MS.gene57124.t1 | MTR_6g024030 | 57.143 | 161 | 58 | 3 | 39 | 196 | 60 | 212 | 1.15e-49 | 175 |
MS.gene57124.t1 | MTR_1g052715 | 45.550 | 191 | 98 | 2 | 1 | 190 | 61 | 246 | 1.71e-49 | 177 |
MS.gene57124.t1 | MTR_1g011490 | 46.154 | 208 | 92 | 3 | 1 | 208 | 102 | 289 | 3.55e-49 | 176 |
MS.gene57124.t1 | MTR_1g023370 | 46.635 | 208 | 81 | 3 | 1 | 208 | 102 | 279 | 3.86e-48 | 173 |
MS.gene57124.t1 | MTR_3g452170 | 36.667 | 240 | 130 | 3 | 1 | 223 | 102 | 336 | 8.00e-48 | 176 |
MS.gene57124.t1 | MTR_8g005940 | 43.750 | 208 | 73 | 2 | 1 | 208 | 102 | 265 | 3.06e-46 | 167 |
MS.gene57124.t1 | MTR_5g045850 | 45.673 | 208 | 84 | 3 | 1 | 208 | 87 | 265 | 1.58e-45 | 165 |
MS.gene57124.t1 | MTR_3g015660 | 54.110 | 146 | 62 | 1 | 1 | 146 | 102 | 242 | 1.23e-43 | 158 |
MS.gene57124.t1 | MTR_0048s0080 | 42.708 | 192 | 90 | 4 | 38 | 214 | 5 | 191 | 7.26e-43 | 159 |
MS.gene57124.t1 | MTR_0105s0080 | 55.714 | 140 | 57 | 1 | 1 | 140 | 58 | 192 | 1.48e-42 | 155 |
MS.gene57124.t1 | MTR_5g012180 | 43.684 | 190 | 79 | 3 | 19 | 208 | 75 | 236 | 1.18e-40 | 150 |
MS.gene57124.t1 | MTR_5g019960 | 46.528 | 144 | 70 | 3 | 1 | 143 | 108 | 245 | 6.32e-33 | 128 |
MS.gene57124.t1 | MTR_1g082860 | 49.635 | 137 | 55 | 2 | 1 | 137 | 102 | 224 | 1.06e-32 | 128 |
MS.gene57124.t1 | MTR_8g494200 | 26.380 | 489 | 285 | 14 | 348 | 770 | 132 | 611 | 2.03e-32 | 134 |
MS.gene57124.t1 | MTR_0286s0050 | 57.500 | 120 | 46 | 4 | 225 | 341 | 9 | 126 | 2.29e-31 | 120 |
MS.gene57124.t1 | MTR_3g036220 | 36.842 | 190 | 78 | 2 | 19 | 208 | 75 | 222 | 1.13e-29 | 119 |
MS.gene57124.t1 | MTR_2g019040 | 43.671 | 158 | 70 | 3 | 51 | 208 | 4 | 142 | 1.15e-27 | 112 |
MS.gene57124.t1 | MTR_5g071020 | 37.368 | 190 | 56 | 3 | 19 | 208 | 75 | 201 | 1.35e-27 | 112 |
MS.gene57124.t1 | MTR_7g051400 | 29.389 | 262 | 141 | 5 | 4 | 248 | 105 | 339 | 6.52e-26 | 113 |
MS.gene57124.t1 | MTR_2g435900 | 54.945 | 91 | 41 | 0 | 19 | 109 | 22 | 112 | 1.86e-25 | 102 |
MS.gene57124.t1 | MTR_3g449160 | 53.846 | 91 | 42 | 0 | 19 | 109 | 22 | 112 | 5.30e-25 | 100 |
MS.gene57124.t1 | MTR_7g039300 | 68.919 | 74 | 20 | 1 | 105 | 175 | 172 | 245 | 4.02e-23 | 99.8 |
MS.gene57124.t1 | MTR_7g039300 | 67.442 | 43 | 14 | 0 | 1 | 43 | 133 | 175 | 1.18e-11 | 66.2 |
MS.gene57124.t1 | MTR_3g007260 | 50.000 | 94 | 46 | 1 | 19 | 112 | 80 | 172 | 6.29e-23 | 97.1 |
MS.gene57124.t1 | MTR_4g060433 | 59.756 | 82 | 16 | 2 | 161 | 225 | 1 | 82 | 8.64e-21 | 91.7 |
MS.gene57124.t1 | MTR_3g078633 | 24.438 | 356 | 218 | 10 | 427 | 763 | 276 | 599 | 2.31e-19 | 93.2 |
MS.gene57124.t1 | MTR_3g078633 | 24.438 | 356 | 218 | 10 | 427 | 763 | 204 | 527 | 3.21e-19 | 92.4 |
MS.gene57124.t1 | MTR_6g465570 | 52.857 | 70 | 33 | 0 | 1 | 70 | 98 | 167 | 2.53e-17 | 80.9 |
MS.gene57124.t1 | MTR_7g096440 | 33.333 | 111 | 74 | 0 | 1 | 111 | 55 | 165 | 2.95e-17 | 83.2 |
MS.gene57124.t1 | MTR_3g079340 | 27.303 | 304 | 167 | 12 | 427 | 708 | 277 | 548 | 3.29e-16 | 83.2 |
MS.gene57124.t1 | MTR_8g465040 | 50.746 | 67 | 33 | 0 | 4 | 70 | 105 | 171 | 1.15e-14 | 73.2 |
MS.gene57124.t1 | MTR_3g068135 | 42.529 | 87 | 42 | 1 | 147 | 225 | 39 | 125 | 3.21e-13 | 69.7 |
MS.gene57124.t1 | MTR_1g023450 | 71.429 | 42 | 12 | 0 | 599 | 640 | 18 | 59 | 5.89e-13 | 64.7 |
MS.gene57124.t1 | MTR_3g055660 | 24.150 | 294 | 181 | 10 | 2 | 270 | 128 | 404 | 1.91e-11 | 67.8 |
MS.gene57124.t1 | MTR_4g014890 | 23.630 | 292 | 185 | 9 | 2 | 270 | 128 | 404 | 2.36e-11 | 67.4 |
MS.gene57124.t1 | MTR_1g051235 | 44.118 | 68 | 37 | 1 | 4 | 70 | 105 | 172 | 3.67e-11 | 63.2 |
MS.gene57124.t1 | MTR_7g070110 | 93.103 | 29 | 2 | 0 | 1 | 29 | 86 | 114 | 9.33e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene57124.t1 | AT5G14930 | 37.436 | 585 | 279 | 19 | 228 | 788 | 9 | 530 | 6.15e-101 | 323 |
MS.gene57124.t1 | AT3G52430 | 28.472 | 432 | 277 | 11 | 348 | 770 | 112 | 520 | 3.27e-39 | 153 |
MS.gene57124.t1 | AT5G14930 | 38.525 | 244 | 121 | 6 | 228 | 455 | 9 | 239 | 1.78e-36 | 138 |
MS.gene57124.t1 | AT3G48080 | 23.720 | 371 | 219 | 13 | 427 | 764 | 265 | 604 | 2.52e-11 | 67.8 |
Find 139 sgRNAs with CRISPR-Local
Find 357 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAGGATTTGTTGCTCTCTT+TGG | 0.148882 | 6.2:+3988871 | MS.gene57124:CDS |
AAGGATTTGTTGCTCTCTTT+GGG | 0.194536 | 6.2:+3988872 | MS.gene57124:CDS |
TAACTCTAGATTCTTGCTTT+TGG | 0.226739 | 6.2:+3994828 | MS.gene57124:CDS |
TGATCTTACACTGGAGGATT+TGG | 0.258980 | 6.2:+3988670 | MS.gene57124:CDS |
TGAAAATATTGGATTGCTTT+TGG | 0.264679 | 6.2:-3992734 | None:intergenic |
GAGGCTTCATCAATGATTCT+TGG | 0.273548 | 6.2:-3994568 | None:intergenic |
TGGCAGATTCAGGAAGTATA+TGG | 0.278805 | 6.2:+3988971 | MS.gene57124:CDS |
GCAACATTTGTGACAAGTTC+TGG | 0.285451 | 6.2:+3992493 | MS.gene57124:CDS |
TTGTACAGTTTGGCAGATTC+AGG | 0.296515 | 6.2:+3988961 | MS.gene57124:CDS |
CTGGTCTTCTTCGAAAATTA+TGG | 0.301057 | 6.2:+3992512 | MS.gene57124:CDS |
GAGTCAATATAAGAAAATTA+AGG | 0.303089 | 6.2:+3995030 | MS.gene57124:CDS |
AAGATCCTCAATAGTCATTC+TGG | 0.311098 | 6.2:-3989357 | None:intergenic |
TCGGAACGTGTTTGAATTCA+TGG | 0.317416 | 6.2:+3988447 | MS.gene57124:CDS |
TTCACTTTATTACTATTAGA+TGG | 0.321607 | 6.2:+3993426 | MS.gene57124:CDS |
TGTCAATCTTCAATCTGAAT+TGG | 0.323046 | 6.2:+3992657 | MS.gene57124:CDS |
CAAACACTTGACTTCGATCC+TGG | 0.327055 | 6.2:-3993719 | None:intergenic |
GTGTTTGGTTCTATAGAGTA+TGG | 0.329217 | 6.2:+3993735 | MS.gene57124:CDS |
TTCATGTAATCTTCAACTTC+AGG | 0.329620 | 6.2:-3989147 | None:intergenic |
GGATGAGGCAACAAGAAAAT+TGG | 0.331734 | 6.2:+3994916 | MS.gene57124:CDS |
CAGGAAGAGGATGTGGTTGC+TGG | 0.341499 | 6.2:+3988493 | MS.gene57124:CDS |
CCATGAAGAACTATGTGATA+TGG | 0.354868 | 6.2:-3993526 | None:intergenic |
AAACCTCTTTGCATCACCTT+TGG | 0.355006 | 6.2:+3993468 | MS.gene57124:CDS |
CCATATCACATAGTTCTTCA+TGG | 0.362040 | 6.2:+3993526 | MS.gene57124:CDS |
AAATATATAATACAATATAT+TGG | 0.382741 | 6.2:-3989412 | None:intergenic |
GGCTCCAAGGTTATCATGAA+TGG | 0.389396 | 6.2:+3989117 | MS.gene57124:CDS |
ACCTTTGGTTCTCCACTACT+TGG | 0.395626 | 6.2:+3993483 | MS.gene57124:CDS |
TTCGGAACTTACTAACATCT+TGG | 0.398246 | 6.2:-3994514 | None:intergenic |
GAAGCAGCAGCAACAACAAC+TGG | 0.402120 | 6.2:+3994770 | MS.gene57124:CDS |
GTAATGTTAAGTGAAAATAT+TGG | 0.404625 | 6.2:-3992745 | None:intergenic |
TAACAAGCTTAGTATTATCA+TGG | 0.406929 | 6.2:-3988932 | None:intergenic |
TGAAGATTGACAGAATTTGA+TGG | 0.407488 | 6.2:-3992646 | None:intergenic |
AGAACTGCTAAAACAGAATC+AGG | 0.410566 | 6.2:-3993684 | None:intergenic |
AACTATCTTGCAAAAGATGC+AGG | 0.423516 | 6.2:+3989614 | MS.gene57124:CDS |
TTGCAAGGACACCGCCAATC+AGG | 0.426183 | 6.2:+3993791 | MS.gene57124:CDS |
ATGTACATAGTGTGCATCAT+TGG | 0.428900 | 6.2:+3989573 | MS.gene57124:intron |
AGTCCAGTGATTATCAGCTT+AGG | 0.431282 | 6.2:-3993375 | None:intergenic |
ATAATCACTGGACTTGCTCT+TGG | 0.433666 | 6.2:+3993384 | MS.gene57124:CDS |
ATTCATGGCTTGAACCTGAT+TGG | 0.437498 | 6.2:-3993805 | None:intergenic |
ATCTAGTCACTACAAACAAT+TGG | 0.438035 | 6.2:+3994733 | MS.gene57124:CDS |
TCAAGTAACTCCTCAGCAAC+AGG | 0.438739 | 6.2:-3989329 | None:intergenic |
TCATTGGTTACAGTGGTAGA+TGG | 0.443242 | 6.2:+3989589 | MS.gene57124:CDS |
GTGAATTTGCAACTGACATT+GGG | 0.449078 | 6.2:+3988895 | MS.gene57124:CDS |
AATTATAATGTGGAATATGT+TGG | 0.449521 | 6.2:+3995100 | MS.gene57124:CDS |
AGTCAATATAAGAAAATTAA+GGG | 0.452975 | 6.2:+3995031 | MS.gene57124:CDS |
CACAAACTATTGGAAAGAAA+TGG | 0.453048 | 6.2:+3994544 | MS.gene57124:CDS |
ATTGACAGAATTTGATGGTA+TGG | 0.456226 | 6.2:-3992641 | None:intergenic |
GAATTTGAGAATTATGTGTA+TGG | 0.458115 | 6.2:+3994941 | MS.gene57124:CDS |
AGTTCTTGAGACGTCAATCC+AGG | 0.459017 | 6.2:+3993701 | MS.gene57124:CDS |
TAGTGAATCAGAATAATTCA+TGG | 0.460243 | 6.2:-3993820 | None:intergenic |
GGGAAATTCGAGATTTACTA+AGG | 0.460989 | 6.2:+3988405 | MS.gene57124:CDS |
GTCCAGTGATTATCAGCTTA+GGG | 0.462264 | 6.2:-3993374 | None:intergenic |
CAGGATCGAAGTCAAGTGTT+TGG | 0.471867 | 6.2:+3993720 | MS.gene57124:CDS |
CCTTGGTGAAAGTAGCTACA+TGG | 0.476739 | 6.2:+3995000 | MS.gene57124:CDS |
ATTCAAACACGTTCCGAGGC+AGG | 0.477816 | 6.2:-3988441 | None:intergenic |
AACATTGTTTCAAATGTTGT+TGG | 0.478673 | 6.2:+3992550 | MS.gene57124:CDS |
AACGAACAAACAGGTGCAAT+GGG | 0.480051 | 6.2:+3989075 | MS.gene57124:CDS |
GATCTTTCAGGAAGAGGATG+TGG | 0.480564 | 6.2:+3988486 | MS.gene57124:CDS |
GTTATGCTGATTGTACAGTT+TGG | 0.481686 | 6.2:+3988951 | MS.gene57124:CDS |
TCTACGGCGGAACAACTTAT+CGG | 0.482472 | 6.2:+3994624 | MS.gene57124:CDS |
GGCAGATTCAGGAAGTATAT+GGG | 0.485742 | 6.2:+3988972 | MS.gene57124:CDS |
TAATAATGAGCAATGTCTAA+TGG | 0.485989 | 6.2:-3994659 | None:intergenic |
AAATGTTACTAAAGATAAAG+TGG | 0.486163 | 6.2:+3994796 | MS.gene57124:CDS |
CTAATAGTTAACGAACAAAC+AGG | 0.493186 | 6.2:+3989066 | MS.gene57124:intron |
GTCAATATAAGAAAATTAAG+GGG | 0.494372 | 6.2:+3995032 | MS.gene57124:CDS |
GAATTATTCTGATTCACTAC+AGG | 0.496451 | 6.2:+3993824 | MS.gene57124:CDS |
CTCAATGAATACCATGTCAA+TGG | 0.497345 | 6.2:+3994683 | MS.gene57124:CDS |
GTGATGAACTTCCTTGGAAG+TGG | 0.499701 | 6.2:-3993585 | None:intergenic |
ATCACTGGACTTGCTCTTGG+AGG | 0.501122 | 6.2:+3993387 | MS.gene57124:CDS |
ACTACAAACAATTGGAGGAT+TGG | 0.502313 | 6.2:+3994741 | MS.gene57124:CDS |
AAAATCTAGTGACATTGAAA+AGG | 0.507800 | 6.2:+3994895 | MS.gene57124:CDS |
GTAAGAGAGACCGAGAAGAA+TGG | 0.507912 | 6.2:+3988629 | MS.gene57124:CDS |
ACTAGTTCTTACGTGCCCTT+CGG | 0.509307 | 6.2:+3993615 | MS.gene57124:CDS |
TGATCTGTGATGAACTTCCT+TGG | 0.510326 | 6.2:-3993591 | None:intergenic |
CTTCGTACTCGTTGGCTCTA+CGG | 0.512139 | 6.2:+3994608 | MS.gene57124:CDS |
TTGAGGCGAGATCGTTATTG+TGG | 0.517393 | 6.2:+3989381 | MS.gene57124:CDS |
CCTTGCAAATCGCTTTGCGA+TGG | 0.519855 | 6.2:-3993776 | None:intergenic |
TTGGTAACAATGGACTATCA+TGG | 0.521505 | 6.2:+3992569 | MS.gene57124:CDS |
TATTAAGCTACCTGCATATG+TGG | 0.522936 | 6.2:-3993885 | None:intergenic |
GACTATTGAGGATCTTATTG+AGG | 0.523099 | 6.2:+3989364 | MS.gene57124:CDS |
AACAGGACGTGCACTATATG+AGG | 0.523527 | 6.2:-3989312 | None:intergenic |
GGTGAATTTGCAACTGACAT+TGG | 0.529104 | 6.2:+3988894 | MS.gene57124:CDS |
ATCTCCATTCATGATAACCT+TGG | 0.529858 | 6.2:-3989121 | None:intergenic |
TAGACATGGCTCTACTTGAA+TGG | 0.536032 | 6.2:+3994420 | MS.gene57124:CDS |
CCCGTCAACAGGATGGATAA+TGG | 0.539219 | 6.2:+3989254 | MS.gene57124:intron |
CTTTCACCAAGGAAAATCTC+TGG | 0.540545 | 6.2:-3994989 | None:intergenic |
TCAAATGTTGTTGGTAACAA+TGG | 0.541619 | 6.2:+3992559 | MS.gene57124:CDS |
TTGATGAAGCCTCAGAAAGA+AGG | 0.542621 | 6.2:+3994578 | MS.gene57124:CDS |
AGCGACGCTCCTTCTTTCTG+AGG | 0.544608 | 6.2:-3994587 | None:intergenic |
GATTCACTACAGGCATGTAT+CGG | 0.544641 | 6.2:+3993834 | MS.gene57124:CDS |
TTTCTTTCCAATAGTTTGTG+AGG | 0.545370 | 6.2:-3994541 | None:intergenic |
AGGATTGTCACCACATATGC+AGG | 0.547109 | 6.2:+3993875 | MS.gene57124:CDS |
CGGAACAACTTATCGGAGAA+TGG | 0.549150 | 6.2:+3994631 | MS.gene57124:CDS |
TAACGAACAAACAGGTGCAA+TGG | 0.549536 | 6.2:+3989074 | MS.gene57124:CDS |
AACAAGCTTAGTATTATCAT+GGG | 0.550468 | 6.2:-3988931 | None:intergenic |
TATAATGTGGAATATGTTGG+AGG | 0.558258 | 6.2:+3995103 | MS.gene57124:CDS |
TGAACGCTAGCAACCTGCCT+CGG | 0.563302 | 6.2:+3988428 | MS.gene57124:CDS |
AACCCTAAGCTGATAATCAC+TGG | 0.567046 | 6.2:+3993372 | MS.gene57124:CDS |
TAGTCACTACAAACAATTGG+AGG | 0.569273 | 6.2:+3994736 | MS.gene57124:CDS |
ACAAACAGGTGCAATGGGTG+TGG | 0.571945 | 6.2:+3989080 | MS.gene57124:CDS |
TAGTGACATTGAAAAGGATG+AGG | 0.574070 | 6.2:+3994901 | MS.gene57124:CDS |
CTTGCAATGATCCACTTCCA+AGG | 0.574325 | 6.2:+3993574 | MS.gene57124:CDS |
AGGATTTGTTGCTCTCTTTG+GGG | 0.576741 | 6.2:+3988873 | MS.gene57124:CDS |
TATAATGTTTCAGGCACACA+AGG | 0.578619 | 6.2:+3988853 | MS.gene57124:intron |
GAGCGTCGCTTCGTACTCGT+TGG | 0.580717 | 6.2:+3994600 | MS.gene57124:CDS |
GGTTTCATCTACTAAACTCA+AGG | 0.587817 | 6.2:+3992678 | MS.gene57124:CDS |
GGCTTGCAATTGTTCGCACT+AGG | 0.589328 | 6.2:+3993855 | MS.gene57124:CDS |
TCTCCACTACTTGGTGACAA+AGG | 0.595092 | 6.2:+3993492 | MS.gene57124:CDS |
ACCAAGTAGTGGAGAACCAA+AGG | 0.595840 | 6.2:-3993484 | None:intergenic |
AAAAGTCATTGATCTTACAC+TGG | 0.601749 | 6.2:+3988661 | MS.gene57124:CDS |
CATGGCTTGAACCTGATTGG+CGG | 0.603771 | 6.2:-3993802 | None:intergenic |
CAATGCTCATAATTATAATG+TGG | 0.604459 | 6.2:+3995090 | MS.gene57124:CDS |
AATGCAAAAGCGCTGTTCCG+AGG | 0.606929 | 6.2:+3989638 | MS.gene57124:CDS |
AAGTTGAAGATTACATGAAG+AGG | 0.606981 | 6.2:+3989151 | MS.gene57124:CDS |
AGTCTTTACCACCATTGACA+TGG | 0.609609 | 6.2:-3994694 | None:intergenic |
TCTACTTGAATGGTACAAGA+AGG | 0.611495 | 6.2:+3994430 | MS.gene57124:CDS |
TAGTGCACGTCCTGTTGCTG+AGG | 0.611928 | 6.2:+3989319 | MS.gene57124:CDS |
ATGAATTCAAACACGTTCCG+AGG | 0.614983 | 6.2:-3988445 | None:intergenic |
TACCTCCAGAATGACTATTG+AGG | 0.617766 | 6.2:+3989352 | MS.gene57124:CDS |
AATCCTTTGTCACCAAGTAG+TGG | 0.619151 | 6.2:-3993495 | None:intergenic |
AATGAATACCATGTCAATGG+TGG | 0.624112 | 6.2:+3994686 | MS.gene57124:CDS |
AGTCATTGATCTTACACTGG+AGG | 0.624739 | 6.2:+3988664 | MS.gene57124:CDS |
TTATGTGTATGGATTGCTCA+AGG | 0.625770 | 6.2:+3994952 | MS.gene57124:CDS |
ACTATCTTGCAAAAGATGCA+GGG | 0.628569 | 6.2:+3989615 | MS.gene57124:CDS |
TGTGATTGTAGATTTAGCAG+TGG | 0.637656 | 6.2:+3992460 | MS.gene57124:intron |
CCATCGCAAAGCGATTTGCA+AGG | 0.637843 | 6.2:+3993776 | MS.gene57124:CDS |
CACACGAGAAATGTTCCGAA+GGG | 0.637916 | 6.2:-3993630 | None:intergenic |
GCTTGATCAATTGAAGTCTG+AGG | 0.639656 | 6.2:+3992801 | MS.gene57124:CDS |
GAACCAAAGGTGATGCAAAG+AGG | 0.640380 | 6.2:-3993471 | None:intergenic |
ACACACGAGAAATGTTCCGA+AGG | 0.646058 | 6.2:-3993631 | None:intergenic |
GTGTGCATCATTGGTTACAG+TGG | 0.653179 | 6.2:+3989582 | MS.gene57124:intron |
ATATCAGTGTCATGTTGTTG+CGG | 0.654632 | 6.2:-3994299 | None:intergenic |
ATCCTCAATAGTCATTCTGG+AGG | 0.660249 | 6.2:-3989354 | None:intergenic |
TCAATATAAGAAAATTAAGG+GGG | 0.670997 | 6.2:+3995033 | MS.gene57124:CDS |
CGTACTCGTTGGCTCTACGG+CGG | 0.687866 | 6.2:+3994611 | MS.gene57124:CDS |
AAAGTAGCTACATGGCATGG+TGG | 0.693626 | 6.2:+3995008 | MS.gene57124:CDS |
CCATGTAGCTACTTTCACCA+AGG | 0.700600 | 6.2:-3995000 | None:intergenic |
GTGAAAGTAGCTACATGGCA+TGG | 0.700779 | 6.2:+3995005 | MS.gene57124:CDS |
GAATTCAATGAAGATAGACA+TGG | 0.703021 | 6.2:+3994406 | MS.gene57124:CDS |
GGTCATGTTGAACTAACACA+AGG | 0.703808 | 6.2:+3989275 | MS.gene57124:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATTTAAAGATCAAATAAAT+GGG | + | chr6.2:3991034-3991053 | MS.gene57124:intron | 10.0% |
!!! | TTTATCAAAGTATTTTTTTT+CGG | - | chr6.2:3990581-3990600 | None:intergenic | 10.0% |
!! | AATAGTTAGTTGTATTTAAA+TGG | + | chr6.2:3990801-3990820 | MS.gene57124:intron | 15.0% |
!! | AATATCAATGTTTGAAAAAA+CGG | + | chr6.2:3992093-3992112 | MS.gene57124:intron | 15.0% |
!! | AGTCAATATAAGAAAATTAA+GGG | + | chr6.2:3995031-3995050 | MS.gene57124:CDS | 15.0% |
!! | ATATTTCTCAAAAGAATAAT+TGG | - | chr6.2:3989789-3989808 | None:intergenic | 15.0% |
!! | ATTTAAAGATCAAATAAATG+GGG | + | chr6.2:3991035-3991054 | MS.gene57124:intron | 15.0% |
!! | GCAATATATAATTAATTCAT+CGG | + | chr6.2:3988703-3988722 | MS.gene57124:intron | 15.0% |
!! | GTATTTAAAGATCAAATAAA+TGG | + | chr6.2:3991033-3991052 | MS.gene57124:intron | 15.0% |
!! | TTAACTATTAGTTAATATAG+CGG | - | chr6.2:3989057-3989076 | None:intergenic | 15.0% |
!!! | AAAAATGAATTTTTTCTCTA+GGG | - | chr6.2:3994351-3994370 | None:intergenic | 15.0% |
!!! | AAAAATTCATTTTTCAGAAA+AGG | + | chr6.2:3994357-3994376 | MS.gene57124:CDS | 15.0% |
!!! | AAAATTCATTTTTCAGAAAA+GGG | + | chr6.2:3994358-3994377 | MS.gene57124:CDS | 15.0% |
!!! | ACTATTACATTTTTTTTCAT+TGG | + | chr6.2:3988735-3988754 | MS.gene57124:intron | 15.0% |
!!! | ATTGAACAATACTTTAAAAT+CGG | - | chr6.2:3992329-3992348 | None:intergenic | 15.0% |
!!! | CATTACTTTAGAAAAAAATT+TGG | + | chr6.2:3994322-3994341 | MS.gene57124:CDS | 15.0% |
!!! | CTATTACATTTTTTTTCATT+GGG | + | chr6.2:3988736-3988755 | MS.gene57124:intron | 15.0% |
!!! | CTTAAAGACAAATTTTATTT+AGG | + | chr6.2:3990848-3990867 | MS.gene57124:intron | 15.0% |
!!! | TATTACTTTTTGATATCTAA+TGG | + | chr6.2:3989459-3989478 | MS.gene57124:intron | 15.0% |
!!! | TGTTTTAGAATTTGTAATAT+AGG | + | chr6.2:3991943-3991962 | MS.gene57124:intron | 15.0% |
!!! | TTATATTCTCTCATTATTTT+AGG | + | chr6.2:3989483-3989502 | MS.gene57124:intron | 15.0% |
!!! | TTATTATTTTGTTTCAGTAT+TGG | + | chr6.2:3991984-3992003 | MS.gene57124:intron | 15.0% |
!!! | TTTAATTTAATCATCCTTAA+TGG | + | chr6.2:3992022-3992041 | MS.gene57124:intron | 15.0% |
!! | AAAAATACTGTTTAATCACT+AGG | - | chr6.2:3994232-3994251 | None:intergenic | 20.0% |
!! | AAAACAAAAGAAATATGAGA+AGG | - | chr6.2:3991783-3991802 | None:intergenic | 20.0% |
!! | AAAATAATGTAACCATACAT+TGG | - | chr6.2:3990295-3990314 | None:intergenic | 20.0% |
!! | AAATGTTACTAAAGATAAAG+TGG | + | chr6.2:3994796-3994815 | MS.gene57124:CDS | 20.0% |
!! | AATTATAATGTGGAATATGT+TGG | + | chr6.2:3995100-3995119 | MS.gene57124:CDS | 20.0% |
!! | ATCATCAATCAATTCATTAT+AGG | + | chr6.2:3989724-3989743 | MS.gene57124:intron | 20.0% |
!! | ATTCAAAAAACAGAAACATA+GGG | + | chr6.2:3994453-3994472 | MS.gene57124:CDS | 20.0% |
!! | ATTTGGTTATATAATGTTTC+AGG | + | chr6.2:3988844-3988863 | MS.gene57124:intron | 20.0% |
!! | CAAATTCACATAATACTAAA+AGG | - | chr6.2:3988531-3988550 | None:intergenic | 20.0% |
!! | GAGTCAATATAAGAAAATTA+AGG | + | chr6.2:3995030-3995049 | MS.gene57124:CDS | 20.0% |
!! | GTAATGTTAAGTGAAAATAT+TGG | - | chr6.2:3992748-3992767 | None:intergenic | 20.0% |
!! | GTCAATATAAGAAAATTAAG+GGG | + | chr6.2:3995032-3995051 | MS.gene57124:CDS | 20.0% |
!! | GTTTATTTATGTTACAAGAA+AGG | + | chr6.2:3991518-3991537 | MS.gene57124:intron | 20.0% |
!! | TATTATGCTTGATCAAATTA+AGG | - | chr6.2:3993329-3993348 | None:intergenic | 20.0% |
!! | TCAATATAAGAAAATTAAGG+GGG | + | chr6.2:3995033-3995052 | MS.gene57124:CDS | 20.0% |
!! | TCATACATAACAAAATGAAA+TGG | - | chr6.2:3990256-3990275 | None:intergenic | 20.0% |
!! | TTCACTTTATTACTATTAGA+TGG | + | chr6.2:3993426-3993445 | MS.gene57124:CDS | 20.0% |
!! | TTGAAAATACTAATCGTTAA+TGG | + | chr6.2:3990128-3990147 | MS.gene57124:intron | 20.0% |
!!! | AATGGAATTTTAATATCAGA+CGG | - | chr6.2:3989945-3989964 | None:intergenic | 20.0% |
!!! | AATTAAAGAACTATTTTCTC+CGG | - | chr6.2:3994173-3994192 | None:intergenic | 20.0% |
!!! | AGAAATATTGATCTAAAGTT+AGG | + | chr6.2:3989801-3989820 | MS.gene57124:intron | 20.0% |
!!! | ATATAAGCAAAAAAAGTACA+TGG | - | chr6.2:3994144-3994163 | None:intergenic | 20.0% |
!!! | ATTGATATTTTCCTATGAAA+AGG | + | chr6.2:3993017-3993036 | MS.gene57124:intron | 20.0% |
!!! | CTTAGCAATGTTTTAAATTA+TGG | + | chr6.2:3993911-3993930 | MS.gene57124:intron | 20.0% |
!!! | CTTCATTGAATTCAATTTTT+TGG | - | chr6.2:3994399-3994418 | None:intergenic | 20.0% |
!!! | GAAAAATGAATTTTTTCTCT+AGG | - | chr6.2:3994352-3994371 | None:intergenic | 20.0% |
!!! | TTGAACAATACTTTAAAATC+GGG | - | chr6.2:3992328-3992347 | None:intergenic | 20.0% |
!!! | TTTTTCATTGGGATAAAATT+AGG | + | chr6.2:3988747-3988766 | MS.gene57124:intron | 20.0% |
! | AAAATCTAGTGACATTGAAA+AGG | + | chr6.2:3994895-3994914 | MS.gene57124:CDS | 25.0% |
! | AAAATTTGTACTTGAAGCAA+AGG | + | chr6.2:3989863-3989882 | MS.gene57124:intron | 25.0% |
! | AAATCTACAATCACACAAAA+AGG | - | chr6.2:3992455-3992474 | None:intergenic | 25.0% |
! | AAATGAATATGTCAGTTTGT+TGG | - | chr6.2:3992302-3992321 | None:intergenic | 25.0% |
! | AACAAGCTTAGTATTATCAT+GGG | - | chr6.2:3988934-3988953 | None:intergenic | 25.0% |
! | AACATAAATAAACTGAGTGA+AGG | - | chr6.2:3991511-3991530 | None:intergenic | 25.0% |
! | AACATTGTTTCAAATGTTGT+TGG | + | chr6.2:3992550-3992569 | MS.gene57124:CDS | 25.0% |
! | AATTCTTAAGTTAACTCTCA+TGG | + | chr6.2:3988997-3989016 | MS.gene57124:intron | 25.0% |
! | AGAACCTAAATTTGATTCTT+GGG | + | chr6.2:3990871-3990890 | MS.gene57124:intron | 25.0% |
! | ATGAAAAGGTGATAATATAG+TGG | + | chr6.2:3993031-3993050 | MS.gene57124:intron | 25.0% |
! | ATGGCAAATAAAACAGATAT+TGG | - | chr6.2:3989990-3990009 | None:intergenic | 25.0% |
! | ATGTGTTTAAGTAGTTAGTA+CGG | + | chr6.2:3992906-3992925 | MS.gene57124:intron | 25.0% |
! | CAATAACAAAGAAATTACGA+AGG | - | chr6.2:3991566-3991585 | None:intergenic | 25.0% |
! | CAATGCTCATAATTATAATG+TGG | + | chr6.2:3995090-3995109 | MS.gene57124:CDS | 25.0% |
! | GAATTTGAGAATTATGTGTA+TGG | + | chr6.2:3994941-3994960 | MS.gene57124:CDS | 25.0% |
! | GATTCAAAAAACAGAAACAT+AGG | + | chr6.2:3994452-3994471 | MS.gene57124:CDS | 25.0% |
! | GGAACATATAAAAATTGCAA+TGG | - | chr6.2:3992863-3992882 | None:intergenic | 25.0% |
! | GTAAAATTTACTGTATTTGC+TGG | - | chr6.2:3991900-3991919 | None:intergenic | 25.0% |
! | GTATATGAAAAGTTATGGTT+GGG | + | chr6.2:3991122-3991141 | MS.gene57124:intron | 25.0% |
! | GTCATTATAAGATTGAAGAT+TGG | + | chr6.2:3989759-3989778 | MS.gene57124:intron | 25.0% |
! | TAACAAGCTTAGTATTATCA+TGG | - | chr6.2:3988935-3988954 | None:intergenic | 25.0% |
! | TAAGAGTTAGAATAATGACA+AGG | - | chr6.2:3992837-3992856 | None:intergenic | 25.0% |
! | TAATAATGAGCAATGTCTAA+TGG | - | chr6.2:3994662-3994681 | None:intergenic | 25.0% |
! | TAGTGAATCAGAATAATTCA+TGG | - | chr6.2:3993823-3993842 | None:intergenic | 25.0% |
! | TCAATATTCCATGTATATTG+AGG | + | chr6.2:3992344-3992363 | MS.gene57124:intron | 25.0% |
! | TTATCCCAAGAATCAAATTT+AGG | - | chr6.2:3990878-3990897 | None:intergenic | 25.0% |
! | TTCACATAATACTAAAAGGT+AGG | - | chr6.2:3988527-3988546 | None:intergenic | 25.0% |
! | TTGACACACAAAATAACTTT+AGG | + | chr6.2:3991448-3991467 | MS.gene57124:intron | 25.0% |
! | TTGATTTAGCAAAGTAACTT+AGG | - | chr6.2:3990558-3990577 | None:intergenic | 25.0% |
!! | AAACTTTTATTGCCAATGTA+TGG | + | chr6.2:3990280-3990299 | MS.gene57124:intron | 25.0% |
!! | AACCATAACTTTTCATATAC+GGG | - | chr6.2:3991122-3991141 | None:intergenic | 25.0% |
!! | CAACCATAACTTTTCATATA+CGG | - | chr6.2:3991123-3991142 | None:intergenic | 25.0% |
!! | CTATATTATCACCTTTTCAT+AGG | - | chr6.2:3993031-3993050 | None:intergenic | 25.0% |
!! | TAAAAAAAGTACATGTAGTC+TGG | + | chr6.2:3994100-3994119 | MS.gene57124:intron | 25.0% |
!! | TAGTATTTTCAAACCTTGTT+TGG | - | chr6.2:3990120-3990139 | None:intergenic | 25.0% |
!! | TGAAAATATTGGATTGCTTT+TGG | - | chr6.2:3992737-3992756 | None:intergenic | 25.0% |
!! | TTTTTGCTTATATTTGAGTC+CGG | + | chr6.2:3994151-3994170 | MS.gene57124:intron | 25.0% |
!!! | AAATTTTCCCATTCTAGTTA+CGG | - | chr6.2:3989850-3989869 | None:intergenic | 25.0% |
!!! | AATCTTATTTGAAGCATTGT+CGG | + | chr6.2:3990642-3990661 | MS.gene57124:intron | 25.0% |
!!! | ATGTTTTTTATGTCTCAATG+TGG | - | chr6.2:3994004-3994023 | None:intergenic | 25.0% |
!!! | GAATTTGTTTTTAGCTGTTT+TGG | + | chr6.2:3988544-3988563 | MS.gene57124:intron | 25.0% |
!!! | GTATAATGACTTTATTTTCG+CGG | + | chr6.2:3988813-3988832 | MS.gene57124:intron | 25.0% |
AAAAGTCATTGATCTTACAC+TGG | + | chr6.2:3988661-3988680 | MS.gene57124:CDS | 30.0% | |
AACCAACTATGTTTCAAAAG+CGG | + | chr6.2:3992218-3992237 | MS.gene57124:intron | 30.0% | |
AAGTTGAAGATTACATGAAG+AGG | + | chr6.2:3989151-3989170 | MS.gene57124:CDS | 30.0% | |
AATATCTCTCGAAAAACTTG+TGG | - | chr6.2:3991171-3991190 | None:intergenic | 30.0% | |
AATTCACATACAGTTGAGAT+TGG | - | chr6.2:3991757-3991776 | None:intergenic | 30.0% | |
ACAAAAGAAATATGAGAAGG+AGG | - | chr6.2:3991780-3991799 | None:intergenic | 30.0% | |
ACGTTGAAGGAATTCTAATT+AGG | + | chr6.2:3992944-3992963 | MS.gene57124:intron | 30.0% | |
ACTAGGAAATAACTCTAACA+AGG | - | chr6.2:3994215-3994234 | None:intergenic | 30.0% | |
AGTCTGACAAAAAGTTGTTT+CGG | + | chr6.2:3993114-3993133 | MS.gene57124:intron | 30.0% | |
ATACTAATCGTTAATGGAGA+TGG | + | chr6.2:3990134-3990153 | MS.gene57124:intron | 30.0% | |
ATCTAGTCACTACAAACAAT+TGG | + | chr6.2:3994733-3994752 | MS.gene57124:CDS | 30.0% | |
ATGAGACTTCTAAGTTCAAT+CGG | + | chr6.2:3992132-3992151 | MS.gene57124:intron | 30.0% | |
ATTAAGAGCCTTAGATCAAA+TGG | - | chr6.2:3989224-3989243 | None:intergenic | 30.0% | |
ATTACGAAGGAATATGTTGT+AGG | - | chr6.2:3991553-3991572 | None:intergenic | 30.0% | |
CACAAACTATTGGAAAGAAA+TGG | + | chr6.2:3994544-3994563 | MS.gene57124:CDS | 30.0% | |
CATTTAGTCCTCAATATACA+TGG | - | chr6.2:3992355-3992374 | None:intergenic | 30.0% | |
CGTATATGAAAAGTTATGGT+TGG | + | chr6.2:3991121-3991140 | MS.gene57124:intron | 30.0% | |
CTAATAGTTAACGAACAAAC+AGG | + | chr6.2:3989066-3989085 | MS.gene57124:intron | 30.0% | |
CTGGTTGGATCATATTAAAT+TGG | - | chr6.2:3992252-3992271 | None:intergenic | 30.0% | |
GAATTATTCTGATTCACTAC+AGG | + | chr6.2:3993824-3993843 | MS.gene57124:CDS | 30.0% | |
GAATTCAATGAAGATAGACA+TGG | + | chr6.2:3994406-3994425 | MS.gene57124:CDS | 30.0% | |
GAGAACCTAAATTTGATTCT+TGG | + | chr6.2:3990870-3990889 | MS.gene57124:intron | 30.0% | |
GCATAATAACATCTTAATGC+AGG | + | chr6.2:3993341-3993360 | MS.gene57124:intron | 30.0% | |
GCTATGTTTCATGTAAAAAG+CGG | - | chr6.2:3989672-3989691 | None:intergenic | 30.0% | |
GCTTTATAGTATTGCAACAA+AGG | - | chr6.2:3990478-3990497 | None:intergenic | 30.0% | |
GTGTTAGTTGAACAATCATT+TGG | + | chr6.2:3991276-3991295 | MS.gene57124:intron | 30.0% | |
GTTATATCTGGAAGTAACAT+CGG | + | chr6.2:3989885-3989904 | MS.gene57124:intron | 30.0% | |
GTTGGATCATATTAAATTGG+CGG | - | chr6.2:3992249-3992268 | None:intergenic | 30.0% | |
GTTTAAGAAAATGCCAACTA+AGG | - | chr6.2:3990745-3990764 | None:intergenic | 30.0% | |
TAAGAACGACTTTACTAACT+CGG | - | chr6.2:3990530-3990549 | None:intergenic | 30.0% | |
TATAATGTGGAATATGTTGG+AGG | + | chr6.2:3995103-3995122 | MS.gene57124:CDS | 30.0% | |
TATTCAGTGAAAAGTCTCTT+AGG | - | chr6.2:3991645-3991664 | None:intergenic | 30.0% | |
TCATTTGATTCTATCGTAGT+TGG | - | chr6.2:3992159-3992178 | None:intergenic | 30.0% | |
TCTTTCGTAATGTATCTTGA+TGG | + | chr6.2:3990198-3990217 | MS.gene57124:intron | 30.0% | |
TGAAGATTGACAGAATTTGA+TGG | - | chr6.2:3992649-3992668 | None:intergenic | 30.0% | |
TGTCAATCTTCAATCTGAAT+TGG | + | chr6.2:3992657-3992676 | MS.gene57124:CDS | 30.0% | |
TTACGAAGGAATATGTTGTA+GGG | - | chr6.2:3991552-3991571 | None:intergenic | 30.0% | |
TTCATGTAATCTTCAACTTC+AGG | - | chr6.2:3989150-3989169 | None:intergenic | 30.0% | |
TTCGTGATAAACAACATTTG+AGG | - | chr6.2:3990177-3990196 | None:intergenic | 30.0% | |
TTGAAGGAATTCTAATTAGG+AGG | + | chr6.2:3992947-3992966 | MS.gene57124:intron | 30.0% | |
! | ATTAGTCTCAAGAACCATTA+AGG | - | chr6.2:3992039-3992058 | None:intergenic | 30.0% |
! | ATTGACAGAATTTGATGGTA+TGG | - | chr6.2:3992644-3992663 | None:intergenic | 30.0% |
! | TAACTCTAGATTCTTGCTTT+TGG | + | chr6.2:3994828-3994847 | MS.gene57124:CDS | 30.0% |
! | TCTTTTTCTTCCATTCTTCT+CGG | - | chr6.2:3988642-3988661 | None:intergenic | 30.0% |
! | TGTTTCTATAAGCTAGTGAA+TGG | - | chr6.2:3993206-3993225 | None:intergenic | 30.0% |
! | TTTCTTTCCAATAGTTTGTG+AGG | - | chr6.2:3994544-3994563 | None:intergenic | 30.0% |
! | TTTTCGCGGTCAATTAAATT+TGG | + | chr6.2:3988827-3988846 | MS.gene57124:intron | 30.0% |
! | TTTTGTGTTGTAGATGTCAT+TGG | + | chr6.2:3988584-3988603 | MS.gene57124:intron | 30.0% |
!! | AACTCTAGATTCTTGCTTTT+GGG | + | chr6.2:3994829-3994848 | MS.gene57124:CDS | 30.0% |
!! | AATAGTTTGTGAGGCTTTTT+CGG | - | chr6.2:3994535-3994554 | None:intergenic | 30.0% |
!! | AGTTATTTTGTGTGTCAAGT+TGG | - | chr6.2:3991446-3991465 | None:intergenic | 30.0% |
!! | CAAAGACATTTTGATCTTTC+AGG | + | chr6.2:3988474-3988493 | MS.gene57124:CDS | 30.0% |
!! | TCAAATGTTGTTGGTAACAA+TGG | + | chr6.2:3992559-3992578 | MS.gene57124:CDS | 30.0% |
!! | TGTCTTCTCTGAAATTTGAA+TGG | - | chr6.2:3989963-3989982 | None:intergenic | 30.0% |
!!! | CATTATTTTAGGCATGTGAT+GGG | + | chr6.2:3989494-3989513 | MS.gene57124:intron | 30.0% |
!!! | GGTCTAGTCACTTTTAAAAT+CGG | + | chr6.2:3990369-3990388 | MS.gene57124:intron | 30.0% |
!!! | TCATTATTTTAGGCATGTGA+TGG | + | chr6.2:3989493-3989512 | MS.gene57124:intron | 30.0% |
AAAAACTTGTGGAGCATACA+AGG | - | chr6.2:3991160-3991179 | None:intergenic | 35.0% | |
AAAAAGCGGCATATTTACCT+CGG | - | chr6.2:3989658-3989677 | None:intergenic | 35.0% | |
AACTAAGGTTACTATTGGTC+GGG | - | chr6.2:3990730-3990749 | None:intergenic | 35.0% | |
AACTATCTTGCAAAAGATGC+AGG | + | chr6.2:3989614-3989633 | MS.gene57124:CDS | 35.0% | |
AAGAAACAAAGGAAGCTCAA+TGG | - | chr6.2:3991622-3991641 | None:intergenic | 35.0% | |
AAGATCCTCAATAGTCATTC+TGG | - | chr6.2:3989360-3989379 | None:intergenic | 35.0% | |
AAGGCTAATGTGAAGTGAAT+GGG | + | chr6.2:3990500-3990519 | MS.gene57124:intron | 35.0% | |
AAGGTTAACCGTAACTAGAA+TGG | + | chr6.2:3989839-3989858 | MS.gene57124:intron | 35.0% | |
AATGAATACCATGTCAATGG+TGG | + | chr6.2:3994686-3994705 | MS.gene57124:CDS | 35.0% | |
ACTACAAACAATTGGAGGAT+TGG | + | chr6.2:3994741-3994760 | MS.gene57124:CDS | 35.0% | |
ACTATCTTGCAAAAGATGCA+GGG | + | chr6.2:3989615-3989634 | MS.gene57124:CDS | 35.0% | |
AGAACTGCTAAAACAGAATC+AGG | - | chr6.2:3993687-3993706 | None:intergenic | 35.0% | |
AGAGACGTGATTTGAAGAAA+AGG | - | chr6.2:3994056-3994075 | None:intergenic | 35.0% | |
AGATATTAGTCGTTCCTATG+TGG | + | chr6.2:3991184-3991203 | MS.gene57124:intron | 35.0% | |
AGGTTAACCGTAACTAGAAT+GGG | + | chr6.2:3989840-3989859 | MS.gene57124:intron | 35.0% | |
AGTCTCTTAGGAAGAAACAA+AGG | - | chr6.2:3991633-3991652 | None:intergenic | 35.0% | |
ATATCAGTGTCATGTTGTTG+CGG | - | chr6.2:3994302-3994321 | None:intergenic | 35.0% | |
ATCTCCATTCATGATAACCT+TGG | - | chr6.2:3989124-3989143 | None:intergenic | 35.0% | |
ATGAAAAGTTATGGTTGGGA+GGG | + | chr6.2:3991126-3991145 | MS.gene57124:intron | 35.0% | |
ATGACAATCAACAAGAGTCA+AGG | + | chr6.2:3990008-3990027 | MS.gene57124:intron | 35.0% | |
ATGCACACTATGTACATGAA+CGG | - | chr6.2:3989570-3989589 | None:intergenic | 35.0% | |
ATGCCAACTAAGGTTACTAT+TGG | - | chr6.2:3990735-3990754 | None:intergenic | 35.0% | |
ATGTACATAGTGTGCATCAT+TGG | + | chr6.2:3989573-3989592 | MS.gene57124:intron | 35.0% | |
CAACTAAGGTTACTATTGGT+CGG | - | chr6.2:3990731-3990750 | None:intergenic | 35.0% | |
CAATGGAAATGTGTAGGAAA+TGG | - | chr6.2:3991605-3991624 | None:intergenic | 35.0% | |
CCATATCACATAGTTCTTCA+TGG | + | chr6.2:3993526-3993545 | MS.gene57124:CDS | 35.0% | |
CCATGAAGAACTATGTGATA+TGG | - | chr6.2:3993529-3993548 | None:intergenic | 35.0% | |
CTAAAGTTAGGACTATGCAA+TGG | + | chr6.2:3989813-3989832 | MS.gene57124:intron | 35.0% | |
CTAAGCTATGCAATATGGAA+AGG | + | chr6.2:3988774-3988793 | MS.gene57124:intron | 35.0% | |
CTCAATGAATACCATGTCAA+TGG | + | chr6.2:3994683-3994702 | MS.gene57124:CDS | 35.0% | |
CTTAAGTTAACTCTCATGGA+AGG | + | chr6.2:3989001-3989020 | MS.gene57124:intron | 35.0% | |
CTTGAAGCAAAGGTTATATC+TGG | + | chr6.2:3989873-3989892 | MS.gene57124:intron | 35.0% | |
GAAAAAGCCTCACAAACTAT+TGG | + | chr6.2:3994534-3994553 | MS.gene57124:CDS | 35.0% | |
GACCCGTATATGAAAAGTTA+TGG | + | chr6.2:3991117-3991136 | MS.gene57124:intron | 35.0% | |
GACTATTGAGGATCTTATTG+AGG | + | chr6.2:3989364-3989383 | MS.gene57124:CDS | 35.0% | |
GCACTTAACTAAACGTTTAG+AGG | - | chr6.2:3992884-3992903 | None:intergenic | 35.0% | |
GGAATTCTAATTAGGAGGTT+CGG | + | chr6.2:3992952-3992971 | MS.gene57124:intron | 35.0% | |
GGGAAATTCGAGATTTACTA+AGG | + | chr6.2:3988405-3988424 | MS.gene57124:CDS | 35.0% | |
GGGCAATCACTTAAAAATGT+TGG | + | chr6.2:3990029-3990048 | MS.gene57124:intron | 35.0% | |
GGTTTCATCTACTAAACTCA+AGG | + | chr6.2:3992678-3992697 | MS.gene57124:CDS | 35.0% | |
GTGAATTTGCAACTGACATT+GGG | + | chr6.2:3988895-3988914 | MS.gene57124:CDS | 35.0% | |
GTGATCTAAGCTATGCAATA+TGG | + | chr6.2:3988769-3988788 | MS.gene57124:intron | 35.0% | |
GTTTAAGTAGTTAGTACGGT+TGG | + | chr6.2:3992910-3992929 | MS.gene57124:intron | 35.0% | |
TAGTCACTACAAACAATTGG+AGG | + | chr6.2:3994736-3994755 | MS.gene57124:CDS | 35.0% | |
TAGTGACATTGAAAAGGATG+AGG | + | chr6.2:3994901-3994920 | MS.gene57124:CDS | 35.0% | |
TATAATGTTTCAGGCACACA+AGG | + | chr6.2:3988853-3988872 | MS.gene57124:intron | 35.0% | |
TATGAAAAGTTATGGTTGGG+AGG | + | chr6.2:3991125-3991144 | MS.gene57124:intron | 35.0% | |
TATTAAGCTACCTGCATATG+TGG | - | chr6.2:3993888-3993907 | None:intergenic | 35.0% | |
TCGATTAACTTCTACGTGAT+AGG | + | chr6.2:3990322-3990341 | MS.gene57124:intron | 35.0% | |
TCTACTTGAATGGTACAAGA+AGG | + | chr6.2:3994430-3994449 | MS.gene57124:CDS | 35.0% | |
TGACAATCAACAAGAGTCAA+GGG | + | chr6.2:3990009-3990028 | MS.gene57124:intron | 35.0% | |
TGTGATTGTAGATTTAGCAG+TGG | + | chr6.2:3992460-3992479 | MS.gene57124:intron | 35.0% | |
TTCGGAACTTACTAACATCT+TGG | - | chr6.2:3994517-3994536 | None:intergenic | 35.0% | |
TTGCAATACTATAAAGCCCA+AGG | + | chr6.2:3990481-3990500 | MS.gene57124:intron | 35.0% | |
TTGTAAAACCTTCGACTCTT+CGG | - | chr6.2:3990962-3990981 | None:intergenic | 35.0% | |
! | AAGCAAGTTGAAGAAGTTGA+AGG | - | chr6.2:3991706-3991725 | None:intergenic | 35.0% |
! | CTGGTCTTCTTCGAAAATTA+TGG | + | chr6.2:3992512-3992531 | MS.gene57124:CDS | 35.0% |
! | GGTATTTATTTGCTAAGTCC+TGG | + | chr6.2:3990050-3990069 | MS.gene57124:intron | 35.0% |
! | GTTATGCTGATTGTACAGTT+TGG | + | chr6.2:3988951-3988970 | MS.gene57124:CDS | 35.0% |
! | TTATGTGTATGGATTGCTCA+AGG | + | chr6.2:3994952-3994971 | MS.gene57124:CDS | 35.0% |
! | TTGACTCTTGTTGATTGTCA+TGG | - | chr6.2:3990009-3990028 | None:intergenic | 35.0% |
!! | AAGGATTTGTTGCTCTCTTT+GGG | + | chr6.2:3988872-3988891 | MS.gene57124:CDS | 35.0% |
!! | ATTCACTTCACATTAGCCTT+GGG | - | chr6.2:3990500-3990519 | None:intergenic | 35.0% |
!! | CATTTTGATCTTTCAGGAAG+AGG | + | chr6.2:3988480-3988499 | MS.gene57124:CDS | 35.0% |
!! | GAATATGTCAGTTTGTTGGT+TGG | - | chr6.2:3992298-3992317 | None:intergenic | 35.0% |
!! | GTGTTTGGTTCTATAGAGTA+TGG | + | chr6.2:3993735-3993754 | MS.gene57124:CDS | 35.0% |
!! | TTGGTAACAATGGACTATCA+TGG | + | chr6.2:3992569-3992588 | MS.gene57124:CDS | 35.0% |
!!! | AACCGCTTTTGAAACATAGT+TGG | - | chr6.2:3992223-3992242 | None:intergenic | 35.0% |
AAACCTCTTTGCATCACCTT+TGG | + | chr6.2:3993468-3993487 | MS.gene57124:CDS | 40.0% | |
AACCCTAAGCTGATAATCAC+TGG | + | chr6.2:3993372-3993391 | MS.gene57124:CDS | 40.0% | |
AACGAACAAACAGGTGCAAT+GGG | + | chr6.2:3989075-3989094 | MS.gene57124:CDS | 40.0% | |
AACGACTTTACTAACTCGGT+AGG | - | chr6.2:3990526-3990545 | None:intergenic | 40.0% | |
AAGACCTCAAACTCGAATCA+TGG | - | chr6.2:3993140-3993159 | None:intergenic | 40.0% | |
AAGTCGTTGTCATTGACCTT+TGG | + | chr6.2:3991477-3991496 | MS.gene57124:intron | 40.0% | |
AATCACGTCTCTTACTACTC+TGG | + | chr6.2:3994064-3994083 | MS.gene57124:intron | 40.0% | |
AATCCTTTGTCACCAAGTAG+TGG | - | chr6.2:3993498-3993517 | None:intergenic | 40.0% | |
ACATGTGTAAGAGTTCAGTC+AGG | + | chr6.2:3993081-3993100 | MS.gene57124:intron | 40.0% | |
ACCAGTTTCAATCTCGCATA+CGG | - | chr6.2:3989533-3989552 | None:intergenic | 40.0% | |
ACCATTATCCATCCTGTTGA+CGG | - | chr6.2:3989258-3989277 | None:intergenic | 40.0% | |
AGTCATTGATCTTACACTGG+AGG | + | chr6.2:3988664-3988683 | MS.gene57124:CDS | 40.0% | |
AGTCCAGTGATTATCAGCTT+AGG | - | chr6.2:3993378-3993397 | None:intergenic | 40.0% | |
AGTCGTTGTCATTGACCTTT+GGG | + | chr6.2:3991478-3991497 | MS.gene57124:intron | 40.0% | |
AGTCTTTACCACCATTGACA+TGG | - | chr6.2:3994697-3994716 | None:intergenic | 40.0% | |
ATCCTCAATAGTCATTCTGG+AGG | - | chr6.2:3989357-3989376 | None:intergenic | 40.0% | |
ATGAATTCAAACACGTTCCG+AGG | - | chr6.2:3988448-3988467 | None:intergenic | 40.0% | |
ATTCATGGCTTGAACCTGAT+TGG | - | chr6.2:3993808-3993827 | None:intergenic | 40.0% | |
CAAGGCTAATGTGAAGTGAA+TGG | + | chr6.2:3990499-3990518 | MS.gene57124:intron | 40.0% | |
CGAAGTTTACAACTCCACAT+AGG | - | chr6.2:3991201-3991220 | None:intergenic | 40.0% | |
CGACCAATAGTAACCTTAGT+TGG | + | chr6.2:3990729-3990748 | MS.gene57124:intron | 40.0% | |
CTTTCACCAAGGAAAATCTC+TGG | - | chr6.2:3994992-3995011 | None:intergenic | 40.0% | |
GAAGCTCAATGGAAATGTGT+AGG | - | chr6.2:3991611-3991630 | None:intergenic | 40.0% | |
GAGGCTTCATCAATGATTCT+TGG | - | chr6.2:3994571-3994590 | None:intergenic | 40.0% | |
GATTCACTACAGGCATGTAT+CGG | + | chr6.2:3993834-3993853 | MS.gene57124:CDS | 40.0% | |
GCAACATTTGTGACAAGTTC+TGG | + | chr6.2:3992493-3992512 | MS.gene57124:CDS | 40.0% | |
GCAGTTCACCATTTGATCTA+AGG | + | chr6.2:3989213-3989232 | MS.gene57124:intron | 40.0% | |
GCTTGATCAATTGAAGTCTG+AGG | + | chr6.2:3992801-3992820 | MS.gene57124:CDS | 40.0% | |
GGATGAGGCAACAAGAAAAT+TGG | + | chr6.2:3994916-3994935 | MS.gene57124:CDS | 40.0% | |
GGTCATGTTGAACTAACACA+AGG | + | chr6.2:3989275-3989294 | MS.gene57124:CDS | 40.0% | |
GGTGAATTTGCAACTGACAT+TGG | + | chr6.2:3988894-3988913 | MS.gene57124:CDS | 40.0% | |
GTCCAGTGATTATCAGCTTA+GGG | - | chr6.2:3993377-3993396 | None:intergenic | 40.0% | |
TAACGAACAAACAGGTGCAA+TGG | + | chr6.2:3989074-3989093 | MS.gene57124:CDS | 40.0% | |
TACCTCCAGAATGACTATTG+AGG | + | chr6.2:3989352-3989371 | MS.gene57124:CDS | 40.0% | |
TAGGACTATGCAATGGAACA+AGG | + | chr6.2:3989820-3989839 | MS.gene57124:intron | 40.0% | |
TATGCGAGATTGAAACTGGT+GGG | + | chr6.2:3989533-3989552 | MS.gene57124:intron | 40.0% | |
TCGGAACGTGTTTGAATTCA+TGG | + | chr6.2:3988447-3988466 | MS.gene57124:CDS | 40.0% | |
TGAAAAGTTATGGTTGGGAG+GGG | + | chr6.2:3991127-3991146 | MS.gene57124:intron | 40.0% | |
TGATCTGTGATGAACTTCCT+TGG | - | chr6.2:3993594-3993613 | None:intergenic | 40.0% | |
TGATCTTACACTGGAGGATT+TGG | + | chr6.2:3988670-3988689 | MS.gene57124:CDS | 40.0% | |
TGTCTACTCTTCTAGCACAA+TGG | + | chr6.2:3991730-3991749 | MS.gene57124:intron | 40.0% | |
TTGATGAAGCCTCAGAAAGA+AGG | + | chr6.2:3994578-3994597 | MS.gene57124:CDS | 40.0% | |
TTGTACAGTTTGGCAGATTC+AGG | + | chr6.2:3988961-3988980 | MS.gene57124:CDS | 40.0% | |
! | ATAATCACTGGACTTGCTCT+TGG | + | chr6.2:3993384-3993403 | MS.gene57124:CDS | 40.0% |
! | CATTCACTTCACATTAGCCT+TGG | - | chr6.2:3990501-3990520 | None:intergenic | 40.0% |
! | GCGAAAAAGTTTTCATACCC+AGG | + | chr6.2:3989907-3989926 | MS.gene57124:intron | 40.0% |
! | GGCAGATTCAGGAAGTATAT+GGG | + | chr6.2:3988972-3988991 | MS.gene57124:CDS | 40.0% |
! | TAGACATGGCTCTACTTGAA+TGG | + | chr6.2:3994420-3994439 | MS.gene57124:CDS | 40.0% |
! | TCATTGGTTACAGTGGTAGA+TGG | + | chr6.2:3989589-3989608 | MS.gene57124:CDS | 40.0% |
! | TGGCAGATTCAGGAAGTATA+TGG | + | chr6.2:3988971-3988990 | MS.gene57124:CDS | 40.0% |
!! | AGGATTTGTTGCTCTCTTTG+GGG | + | chr6.2:3988873-3988892 | MS.gene57124:CDS | 40.0% |
!! | CAAGGATTTGTTGCTCTCTT+TGG | + | chr6.2:3988871-3988890 | MS.gene57124:CDS | 40.0% |
!! | TGTCAGTTTGTTGGTTGGTT+TGG | - | chr6.2:3992293-3992312 | None:intergenic | 40.0% |
AAAGTAGCTACATGGCATGG+TGG | + | chr6.2:3995008-3995027 | MS.gene57124:CDS | 45.0% | |
AACAGGACGTGCACTATATG+AGG | - | chr6.2:3989315-3989334 | None:intergenic | 45.0% | |
AATATTGCCCGTCAACAGGA+TGG | + | chr6.2:3989247-3989266 | MS.gene57124:intron | 45.0% | |
ACACACGAGAAATGTTCCGA+AGG | - | chr6.2:3993634-3993653 | None:intergenic | 45.0% | |
ACATGGATCTAGTCCGCATT+TGG | - | chr6.2:3994127-3994146 | None:intergenic | 45.0% | |
ACCGTATGCGAGATTGAAAC+TGG | + | chr6.2:3989529-3989548 | MS.gene57124:intron | 45.0% | |
AGACGGTTGAAGAGATAACC+TGG | - | chr6.2:3989928-3989947 | None:intergenic | 45.0% | |
AGATTGAAACTGGTGGGGAA+TGG | + | chr6.2:3989539-3989558 | MS.gene57124:intron | 45.0% | |
AGGATTGTCACCACATATGC+AGG | + | chr6.2:3993875-3993894 | MS.gene57124:CDS | 45.0% | |
AGTGAAGGAAAATGCCCCAA+AGG | - | chr6.2:3991496-3991515 | None:intergenic | 45.0% | |
AGTTCTTGAGACGTCAATCC+AGG | + | chr6.2:3993701-3993720 | MS.gene57124:CDS | 45.0% | |
ATGCGAGATTGAAACTGGTG+GGG | + | chr6.2:3989534-3989553 | MS.gene57124:intron | 45.0% | |
CAAACACTTGACTTCGATCC+TGG | - | chr6.2:3993722-3993741 | None:intergenic | 45.0% | |
CACACGAGAAATGTTCCGAA+GGG | - | chr6.2:3993633-3993652 | None:intergenic | 45.0% | |
CAGGATCGAAGTCAAGTGTT+TGG | + | chr6.2:3993720-3993739 | MS.gene57124:CDS | 45.0% | |
CATGTAGTCTGGTCCAAATG+CGG | + | chr6.2:3994111-3994130 | MS.gene57124:intron | 45.0% | |
CCATTATCCATCCTGTTGAC+GGG | - | chr6.2:3989257-3989276 | None:intergenic | 45.0% | |
CCTTGGTGAAAGTAGCTACA+TGG | + | chr6.2:3995000-3995019 | MS.gene57124:CDS | 45.0% | |
CGGAACAACTTATCGGAGAA+TGG | + | chr6.2:3994631-3994650 | MS.gene57124:CDS | 45.0% | |
CTTGCAATGATCCACTTCCA+AGG | + | chr6.2:3993574-3993593 | MS.gene57124:CDS | 45.0% | |
GAACCAAAGGTGATGCAAAG+AGG | - | chr6.2:3993474-3993493 | None:intergenic | 45.0% | |
GACGGTTGAAGAGATAACCT+GGG | - | chr6.2:3989927-3989946 | None:intergenic | 45.0% | |
GATCTTTCAGGAAGAGGATG+TGG | + | chr6.2:3988486-3988505 | MS.gene57124:CDS | 45.0% | |
GGCTCCAAGGTTATCATGAA+TGG | + | chr6.2:3989117-3989136 | MS.gene57124:CDS | 45.0% | |
GTAAGAGAGACCGAGAAGAA+TGG | + | chr6.2:3988629-3988648 | MS.gene57124:CDS | 45.0% | |
GTATGCGAGATTGAAACTGG+TGG | + | chr6.2:3989532-3989551 | MS.gene57124:intron | 45.0% | |
GTCGTTGTCATTGACCTTTG+GGG | + | chr6.2:3991479-3991498 | MS.gene57124:intron | 45.0% | |
GTGAAAGTAGCTACATGGCA+TGG | + | chr6.2:3995005-3995024 | MS.gene57124:CDS | 45.0% | |
GTGATGAACTTCCTTGGAAG+TGG | - | chr6.2:3993588-3993607 | None:intergenic | 45.0% | |
GTTTGGTCTCGATTGTTCTG+CGG | - | chr6.2:3992276-3992295 | None:intergenic | 45.0% | |
TCAAGTAACTCCTCAGCAAC+AGG | - | chr6.2:3989332-3989351 | None:intergenic | 45.0% | |
TCCAGAGTCACTTCCAAACA+AGG | + | chr6.2:3990104-3990123 | MS.gene57124:intron | 45.0% | |
TCTACGGCGGAACAACTTAT+CGG | + | chr6.2:3994624-3994643 | MS.gene57124:CDS | 45.0% | |
TGTCAATATTGCCCGTCAAC+AGG | + | chr6.2:3989243-3989262 | MS.gene57124:intron | 45.0% | |
TGTGTAAGAGTTCAGTCAGG+AGG | + | chr6.2:3993084-3993103 | MS.gene57124:intron | 45.0% | |
TTGAGGCGAGATCGTTATTG+TGG | + | chr6.2:3989381-3989400 | MS.gene57124:CDS | 45.0% | |
! | ACCAAGTAGTGGAGAACCAA+AGG | - | chr6.2:3993487-3993506 | None:intergenic | 45.0% |
! | ACCTTGTTTGGAAGTGACTC+TGG | - | chr6.2:3990108-3990127 | None:intergenic | 45.0% |
! | ACTAGTTCTTACGTGCCCTT+CGG | + | chr6.2:3993615-3993634 | MS.gene57124:CDS | 45.0% |
! | CCATGTAGCTACTTTCACCA+AGG | - | chr6.2:3995003-3995022 | None:intergenic | 45.0% |
! | CTTTTGGGCACATGTTGAAG+AGG | + | chr6.2:3994844-3994863 | MS.gene57124:CDS | 45.0% |
! | GTGTCACCAGAGATTTTCCT+TGG | + | chr6.2:3994983-3995002 | MS.gene57124:CDS | 45.0% |
! | GTGTGCATCATTGGTTACAG+TGG | + | chr6.2:3989582-3989601 | MS.gene57124:intron | 45.0% |
! | TCTCCACTACTTGGTGACAA+AGG | + | chr6.2:3993492-3993511 | MS.gene57124:CDS | 45.0% |
!! | ACCTTTGGTTCTCCACTACT+TGG | + | chr6.2:3993483-3993502 | MS.gene57124:CDS | 45.0% |
!!! | GAACTCTTTTTTCGGCTCCA+AGG | + | chr6.2:3989104-3989123 | MS.gene57124:CDS | 45.0% |
!!! | GGTGTGGCGAACTCTTTTTT+CGG | + | chr6.2:3989096-3989115 | MS.gene57124:CDS | 45.0% |
!! | AAATAGTAAAAAATAAAAAT+TGG | + | chr6.2:3992192-3992211 | MS.gene57124:intron | 5.0% |
!! | AAATATATAATACAATATAT+TGG | - | chr6.2:3989415-3989434 | None:intergenic | 5.0% |
AACCTTCGACTCTTCGGAGA+AGG | - | chr6.2:3990956-3990975 | None:intergenic | 50.0% | |
AACTGACCATGCGAGAATCC+AGG | - | chr6.2:3990071-3990090 | None:intergenic | 50.0% | |
ACAAACAGGTGCAATGGGTG+TGG | + | chr6.2:3989080-3989099 | MS.gene57124:CDS | 50.0% | |
ACCTTCGACTCTTCGGAGAA+GGG | - | chr6.2:3990955-3990974 | None:intergenic | 50.0% | |
ATTCAAACACGTTCCGAGGC+AGG | - | chr6.2:3988444-3988463 | None:intergenic | 50.0% | |
CATGGCTTGAACCTGATTGG+CGG | - | chr6.2:3993805-3993824 | None:intergenic | 50.0% | |
CCATCGCAAAGCGATTTGCA+AGG | + | chr6.2:3993776-3993795 | MS.gene57124:CDS | 50.0% | |
CCCGTCAACAGGATGGATAA+TGG | + | chr6.2:3989254-3989273 | MS.gene57124:intron | 50.0% | |
CCTTGCAAATCGCTTTGCGA+TGG | - | chr6.2:3993779-3993798 | None:intergenic | 50.0% | |
CTAAGTCCTGGATTCTCGCA+TGG | + | chr6.2:3990062-3990081 | MS.gene57124:intron | 50.0% | |
GAAGCAGCAGCAACAACAAC+TGG | + | chr6.2:3994770-3994789 | MS.gene57124:CDS | 50.0% | |
GGCTTGCAATTGTTCGCACT+AGG | + | chr6.2:3993855-3993874 | MS.gene57124:CDS | 50.0% | |
TATCATGACCTAGATCGCGC+TGG | + | chr6.2:3994026-3994045 | MS.gene57124:intron | 50.0% | |
! | AGCTAGTGAATGGACTCGAG+TGG | - | chr6.2:3993196-3993215 | None:intergenic | 50.0% |
! | ATCACTGGACTTGCTCTTGG+AGG | + | chr6.2:3993387-3993406 | MS.gene57124:CDS | 50.0% |
! | TCGGCCATGATTCGAGTTTG+AGG | + | chr6.2:3993133-3993152 | MS.gene57124:intron | 50.0% |
!! | AATGCAAAAGCGCTGTTCCG+AGG | + | chr6.2:3989638-3989657 | MS.gene57124:CDS | 50.0% |
!! | CTTCGTACTCGTTGGCTCTA+CGG | + | chr6.2:3994608-3994627 | MS.gene57124:CDS | 50.0% |
AAGGTCAACCAGCGCGATCT+AGG | - | chr6.2:3994037-3994056 | None:intergenic | 55.0% | |
AATAACCCGTGCTACCGCAC+GGG | - | chr6.2:3990349-3990368 | None:intergenic | 55.0% | |
AGCGACGCTCCTTCTTTCTG+AGG | - | chr6.2:3994590-3994609 | None:intergenic | 55.0% | |
CAATAACCCGTGCTACCGCA+CGG | - | chr6.2:3990350-3990369 | None:intergenic | 55.0% | |
CAGGAAGAGGATGTGGTTGC+TGG | + | chr6.2:3988493-3988512 | MS.gene57124:CDS | 55.0% | |
CCTTCGACTCTTCGGAGAAG+GGG | - | chr6.2:3990954-3990973 | None:intergenic | 55.0% | |
CGATTGTTCTGCGGTCTGGT+TGG | - | chr6.2:3992267-3992286 | None:intergenic | 55.0% | |
GGTGAGCTGAGTGACGTTGA+AGG | + | chr6.2:3992931-3992950 | MS.gene57124:intron | 55.0% | |
GTCTCGATTGTTCTGCGGTC+TGG | - | chr6.2:3992271-3992290 | None:intergenic | 55.0% | |
TAGTGCACGTCCTGTTGCTG+AGG | + | chr6.2:3989319-3989338 | MS.gene57124:CDS | 55.0% | |
TCTACGTGATAGGACCCGTG+CGG | + | chr6.2:3990332-3990351 | MS.gene57124:intron | 55.0% | |
TGAACGCTAGCAACCTGCCT+CGG | + | chr6.2:3988428-3988447 | MS.gene57124:CDS | 55.0% | |
TTGCAAGGACACCGCCAATC+AGG | + | chr6.2:3993791-3993810 | MS.gene57124:CDS | 55.0% | |
ATAGGACCCGTGCGGTAGCA+CGG | + | chr6.2:3990340-3990359 | MS.gene57124:intron | 60.0% | |
CCCCTTCTCCGAAGAGTCGA+AGG | + | chr6.2:3990951-3990970 | MS.gene57124:intron | 60.0% | |
! | CGTGCGGTAGCACGGGTTAT+TGG | + | chr6.2:3990348-3990367 | MS.gene57124:intron | 60.0% |
! | GAGCGTCGCTTCGTACTCGT+TGG | + | chr6.2:3994600-3994619 | MS.gene57124:CDS | 60.0% |
!! | CGTACTCGTTGGCTCTACGG+CGG | + | chr6.2:3994611-3994630 | MS.gene57124:CDS | 60.0% |
TAGGACCCGTGCGGTAGCAC+GGG | + | chr6.2:3990341-3990360 | MS.gene57124:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.2 | gene | 3988403 | 3995144 | 3988403 | ID=MS.gene57124 |
chr6.2 | mRNA | 3988403 | 3995144 | 3988403 | ID=MS.gene57124.t1;Parent=MS.gene57124 |
chr6.2 | exon | 3988403 | 3988514 | 3988403 | ID=MS.gene57124.t1.exon1;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3988403 | 3988514 | 3988403 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3988597 | 3988693 | 3988597 | ID=MS.gene57124.t1.exon2;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3988597 | 3988693 | 3988597 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3988866 | 3988993 | 3988866 | ID=MS.gene57124.t1.exon3;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3988866 | 3988993 | 3988866 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3989073 | 3989172 | 3989073 | ID=MS.gene57124.t1.exon4;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3989073 | 3989172 | 3989073 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3989265 | 3989421 | 3989265 | ID=MS.gene57124.t1.exon5;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3989265 | 3989421 | 3989265 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3989583 | 3989659 | 3989583 | ID=MS.gene57124.t1.exon6;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3989583 | 3989659 | 3989583 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3992471 | 3992822 | 3992471 | ID=MS.gene57124.t1.exon7;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3992471 | 3992822 | 3992471 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3993363 | 3993896 | 3993363 | ID=MS.gene57124.t1.exon8;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3993363 | 3993896 | 3993363 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
chr6.2 | exon | 3994299 | 3995144 | 3994299 | ID=MS.gene57124.t1.exon9;Parent=MS.gene57124.t1 |
chr6.2 | CDS | 3994299 | 3995144 | 3994299 | ID=cds.MS.gene57124.t1;Parent=MS.gene57124.t1 |
Gene Sequence |
Protein sequence |