Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57541.t1 | XP_003627641.1 | 99.3 | 142 | 1 | 0 | 1 | 142 | 46 | 187 | 1.90E-73 | 285 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57541.t1 | G7LCQ0 | 99.3 | 142 | 1 | 0 | 1 | 142 | 46 | 187 | 1.3e-73 | 285.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene57541 | -0.808149 | 3.57E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene57541 | -0.800235 | 1.58E-48 | -1.69E-46 |
| MS.gene050759 | MS.gene57541 | -0.802924 | 4.45E-49 | -1.69E-46 |
| MS.gene052516 | MS.gene57541 | -0.803572 | 3.27E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene57541 | -0.810067 | 1.39E-50 | -1.69E-46 |
| MS.gene05423 | MS.gene57541 | -0.803613 | 3.21E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene57541 | -0.808762 | 2.64E-50 | -1.69E-46 |
| MS.gene055465 | MS.gene57541 | -0.821198 | 4.59E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene57541 | -0.832539 | 8.93E-56 | -1.69E-46 |
| MS.gene055468 | MS.gene57541 | -0.833701 | 4.58E-56 | -1.69E-46 |
| MS.gene055580 | MS.gene57541 | 0.802885 | 4.54E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene57541 | -0.804229 | 2.39E-49 | -1.69E-46 |
| MS.gene056174 | MS.gene57541 | -0.821783 | 3.36E-53 | -1.69E-46 |
| MS.gene056776 | MS.gene57541 | -0.806215 | 9.16E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene57541 | -0.805716 | 1.17E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene57541 | -0.800281 | 1.55E-48 | -1.69E-46 |
| MS.gene06052 | MS.gene57541 | -0.821963 | 3.05E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene57541 | -0.804569 | 2.03E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57541.t1 | MTR_8g032450 | 99.296 | 142 | 1 | 0 | 1 | 142 | 46 | 187 | 1.34e-103 | 294 |
| MS.gene57541.t1 | MTR_8g433000 | 99.296 | 142 | 1 | 0 | 1 | 142 | 46 | 187 | 1.34e-103 | 294 |
| MS.gene57541.t1 | MTR_3g098100 | 31.538 | 130 | 86 | 2 | 15 | 142 | 27 | 155 | 8.94e-17 | 72.4 |
| MS.gene57541.t1 | MTR_8g032430 | 88.889 | 36 | 4 | 0 | 96 | 131 | 7 | 42 | 6.85e-15 | 65.1 |
| MS.gene57541.t1 | MTR_3g098130 | 26.812 | 138 | 101 | 0 | 5 | 142 | 26 | 163 | 1.39e-12 | 61.6 |
| MS.gene57541.t1 | MTR_3g098130 | 26.812 | 138 | 101 | 0 | 5 | 142 | 64 | 201 | 4.63e-12 | 61.2 |
| MS.gene57541.t1 | MTR_3g098140 | 31.818 | 132 | 85 | 2 | 16 | 142 | 25 | 156 | 1.16e-11 | 59.3 |
| MS.gene57541.t1 | MTR_3g098160 | 30.769 | 117 | 77 | 1 | 14 | 126 | 28 | 144 | 2.55e-11 | 58.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene57541.t1 | AT3G61200 | 48.905 | 137 | 67 | 1 | 9 | 142 | 52 | 188 | 2.62e-43 | 141 |
| MS.gene57541.t1 | AT1G04290 | 33.858 | 127 | 83 | 1 | 16 | 142 | 30 | 155 | 6.40e-19 | 78.2 |
Find 24 sgRNAs with CRISPR-Local
Find 445 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACAAGAACTCACATTTAT+TGG | 0.197001 | 8.3:+62242615 | None:intergenic |
| AAAGCTAAGTGATCATAATC+TGG | 0.396135 | 8.3:+62238746 | None:intergenic |
| TGGAGGCGCTGTTGGTTCCT+TGG | 0.404570 | 8.3:-62242733 | MS.gene57541:CDS |
| GAAAAGGAGGTTACACAGAT+AGG | 0.404850 | 8.3:+62243928 | None:intergenic |
| AGTGATCATAATCTGGAAAC+TGG | 0.415696 | 8.3:+62238753 | None:intergenic |
| TTTGTTAAGCTAATGGGTAT+TGG | 0.437940 | 8.3:-62244069 | None:intergenic |
| ATTAGCATTTCTTACCTCTC+TGG | 0.437967 | 8.3:-62242642 | MS.gene57541:CDS |
| GGAAACTGGCATGTTATAGA+AGG | 0.455985 | 8.3:+62238767 | None:intergenic |
| GGTTACACAGATAGGTGGTT+TGG | 0.458834 | 8.3:+62243936 | None:intergenic |
| ACGCTGCATGGAGGCGCTGT+TGG | 0.464941 | 8.3:-62242741 | MS.gene57541:CDS |
| GCTAATGGGTATTGGTGCTC+CGG | 0.499807 | 8.3:-62244061 | None:intergenic |
| AACTGTAGTTGCTGAGGACA+AGG | 0.541714 | 8.3:-62242682 | MS.gene57541:CDS |
| AATGGCTACGGAACGCTGCA+TGG | 0.548420 | 8.3:-62242753 | MS.gene57541:CDS |
| TTGATCAAATTCAACGTGGT+CGG | 0.559420 | 8.3:-62243978 | MS.gene57541:CDS |
| TCGGAACTGCAGAATGGCTA+CGG | 0.561606 | 8.3:-62242765 | MS.gene57541:intron |
| AATGCCTCTGTGGTGAAAAG+TGG | 0.562162 | 8.3:-62238864 | MS.gene57541:CDS |
| CCTGAAAACTGTAACACAGA+TGG | 0.570399 | 8.3:-62244036 | MS.gene57541:CDS |
| TGCTAGAACTGTAGTTGCTG+AGG | 0.632646 | 8.3:-62242688 | MS.gene57541:CDS |
| AGTTGACAGAACTTCAACCA+AGG | 0.637154 | 8.3:+62242716 | None:intergenic |
| AAGGAGGTTACACAGATAGG+TGG | 0.652732 | 8.3:+62243931 | None:intergenic |
| CATTTATTGGAGTACCAGAG+AGG | 0.679961 | 8.3:+62242628 | None:intergenic |
| AGTTGAAGCTAATGCCTCTG+TGG | 0.705039 | 8.3:-62238874 | MS.gene57541:CDS |
| GGCTACGGAACGCTGCATGG+AGG | 0.717519 | 8.3:-62242750 | MS.gene57541:CDS |
| AAAGTTGATCAAATTCAACG+TGG | 0.815769 | 8.3:-62243982 | MS.gene57541:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr8.3:62241904-62241923 | MS.gene57541:intron | 15.0% |
| !! | GAAAGAATATATTCTAATAA+AGG | + | chr8.3:62240350-62240369 | None:intergenic | 15.0% |
| !! | TTTCATATATGTTAGATAAA+AGG | - | chr8.3:62240500-62240519 | MS.gene57541:intron | 15.0% |
| !!! | ATTCTTTGTTTATTGTTTAA+TGG | - | chr8.3:62238970-62238989 | MS.gene57541:intron | 15.0% |
| !!! | ATTTTAAATTGTGATTCATA+TGG | - | chr8.3:62239452-62239471 | MS.gene57541:intron | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr8.3:62241905-62241924 | None:intergenic | 15.0% |
| !!! | TTCTTTGTTTATTGTTTAAT+GGG | - | chr8.3:62238971-62238990 | MS.gene57541:intron | 15.0% |
| !! | AAAATGAAAGAAAAGAGAAA+AGG | + | chr8.3:62238906-62238925 | None:intergenic | 20.0% |
| !! | AAGAATGAATACTACAAAAT+GGG | - | chr8.3:62239480-62239499 | MS.gene57541:intron | 20.0% |
| !! | AGTAATAATTGACGAAAATA+GGG | - | chr8.3:62239331-62239350 | MS.gene57541:intron | 20.0% |
| !! | ATACATAACAATAATGTGTA+TGG | + | chr8.3:62240317-62240336 | None:intergenic | 20.0% |
| !! | ATATATTCTAATAAAGGTGA+AGG | + | chr8.3:62240344-62240363 | None:intergenic | 20.0% |
| !! | GAATTTAAACTGAAAAAAAC+TGG | - | chr8.3:62243999-62244018 | MS.gene57541:CDS | 20.0% |
| !! | TTAAAATAAGCTAATCCAAA+CGG | - | chr8.3:62239252-62239271 | MS.gene57541:intron | 20.0% |
| !! | TTGAATGTAATTATATGTGT+CGG | - | chr8.3:62239358-62239377 | MS.gene57541:intron | 20.0% |
| !!! | TTTAATGGGTTTTGTTAATT+CGG | - | chr8.3:62238985-62239004 | MS.gene57541:intron | 20.0% |
| ! | AAACAAGAACTCACATTTAT+TGG | + | chr8.3:62240203-62240222 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr8.3:62241161-62241180 | None:intergenic | 25.0% |
| ! | AACCTTCATATTAACATACA+GGG | + | chr8.3:62240242-62240261 | None:intergenic | 25.0% |
| ! | AAGATATTGTGGATGTTAAA+AGG | + | chr8.3:62243694-62243713 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr8.3:62241911-62241930 | MS.gene57541:intron | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | + | chr8.3:62242349-62242368 | None:intergenic | 25.0% |
| ! | ACTGAAAAAAACTGGAAATT+TGG | - | chr8.3:62244007-62244026 | MS.gene57541:CDS | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr8.3:62241912-62241931 | MS.gene57541:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | + | chr8.3:62242348-62242367 | None:intergenic | 25.0% |
| ! | ATTCTGTCAATTTGAACTTT+AGG | - | chr8.3:62239890-62239909 | MS.gene57541:intron | 25.0% |
| ! | ATTTCGATACTATAAACTAC+AGG | + | chr8.3:62243878-62243897 | None:intergenic | 25.0% |
| ! | CAGTAATAATTGACGAAAAT+AGG | - | chr8.3:62239330-62239349 | MS.gene57541:intron | 25.0% |
| ! | CTTATATTTATCCCAAGTTT+CGG | - | chr8.3:62242875-62242894 | MS.gene57541:intron | 25.0% |
| ! | GAAACTATAACTATTATCGT+CGG | + | chr8.3:62242557-62242576 | None:intergenic | 25.0% |
| ! | GAAGAATGAATACTACAAAA+TGG | - | chr8.3:62239479-62239498 | MS.gene57541:intron | 25.0% |
| ! | GACGATAATAGTTATAGTTT+CGG | - | chr8.3:62242556-62242575 | MS.gene57541:intron | 25.0% |
| ! | GTAAACTAGTAAAGAATACA+AGG | + | chr8.3:62239856-62239875 | None:intergenic | 25.0% |
| ! | GTAATAATTGACGAAAATAG+GGG | - | chr8.3:62239332-62239351 | MS.gene57541:intron | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | - | chr8.3:62242350-62242369 | MS.gene57541:intron | 25.0% |
| ! | TAAAATAAGCTAATCCAAAC+GGG | - | chr8.3:62239253-62239272 | MS.gene57541:intron | 25.0% |
| ! | TGGATAGCGAAAAAAAATTA+AGG | + | chr8.3:62243824-62243843 | None:intergenic | 25.0% |
| ! | TTAATTCAGGATATTCCATT+AGG | + | chr8.3:62243542-62243561 | None:intergenic | 25.0% |
| ! | TTTCGATACTATAAACTACA+GGG | + | chr8.3:62243877-62243896 | None:intergenic | 25.0% |
| !! | AACACCTTAAAGTAAAGTTT+TGG | + | chr8.3:62243580-62243599 | None:intergenic | 25.0% |
| !! | ACACCTTAAAGTAAAGTTTT+GGG | + | chr8.3:62243579-62243598 | None:intergenic | 25.0% |
| !! | AGAAAAATCTTTTCTCCTAA+TGG | - | chr8.3:62243524-62243543 | MS.gene57541:intron | 25.0% |
| !! | ATTAGGATCGATCTTTTTAT+AGG | - | chr8.3:62240704-62240723 | MS.gene57541:intron | 25.0% |
| !! | CTATTTTCGTCAATTATTAC+TGG | + | chr8.3:62239332-62239351 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr8.3:62241178-62241197 | MS.gene57541:intron | 25.0% |
| !! | GTTTCTTTGATTCTTTTCTT+CGG | - | chr8.3:62238801-62238820 | MS.gene57541:CDS | 25.0% |
| !! | TGTTGTATTGTTTCTTTGAA+GGG | + | chr8.3:62241029-62241048 | None:intergenic | 25.0% |
| !! | TTAGGAGAAAAGATTTTTCT+AGG | + | chr8.3:62243524-62243543 | None:intergenic | 25.0% |
| !! | TTCCATCTTAGATTTTTCAT+CGG | + | chr8.3:62243408-62243427 | None:intergenic | 25.0% |
| !! | TTGTTGTATTGTTTCTTTGA+AGG | + | chr8.3:62241030-62241049 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr8.3:62241303-62241322 | None:intergenic | 25.0% |
| AACATTGTTCAACACACAAA+AGG | + | chr8.3:62239072-62239091 | None:intergenic | 30.0% | |
| AAGTGTATTAAGGATGAAGA+GGG | + | chr8.3:62242702-62242721 | None:intergenic | 30.0% | |
| AGAGAGATATTAAGGATAGA+TGG | + | chr8.3:62242662-62242681 | None:intergenic | 30.0% | |
| ATAAGCGCTAATTACGTTAA+AGG | - | chr8.3:62243622-62243641 | MS.gene57541:intron | 30.0% | |
| ATATAAGATAGCTAGGAAAG+AGG | + | chr8.3:62242862-62242881 | None:intergenic | 30.0% | |
| ATATAGGAGTTTGACGAAAA+TGG | - | chr8.3:62239617-62239636 | MS.gene57541:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr8.3:62241642-62241661 | MS.gene57541:intron | 30.0% | |
| ATCCTTCGTTAAATAAGTTG+TGG | - | chr8.3:62242625-62242644 | MS.gene57541:intron | 30.0% | |
| ATCTTTCTCACTTTCTTTGT+CGG | - | chr8.3:62240031-62240050 | MS.gene57541:intron | 30.0% | |
| ATGAAAGAAAAGAGAAAAGG+AGG | + | chr8.3:62238903-62238922 | None:intergenic | 30.0% | |
| ATGTTAAAAGGATAGGAGAT+CGG | + | chr8.3:62243682-62243701 | None:intergenic | 30.0% | |
| ATTCCAACACAAGATATTAG+AGG | + | chr8.3:62243105-62243124 | None:intergenic | 30.0% | |
| ATTGTGGATGTTAAAAGGAT+AGG | + | chr8.3:62243689-62243708 | None:intergenic | 30.0% | |
| ATTTAAAGGGTGACAAACAA+AGG | + | chr8.3:62243130-62243149 | None:intergenic | 30.0% | |
| CATCAAAATAAAGTGTGCAT+AGG | - | chr8.3:62239400-62239419 | MS.gene57541:intron | 30.0% | |
| CTGAAAATCGCTTTGTAATT+TGG | - | chr8.3:62240670-62240689 | MS.gene57541:intron | 30.0% | |
| GAACCTTCATATTAACATAC+AGG | + | chr8.3:62240243-62240262 | None:intergenic | 30.0% | |
| GAAGGATTATACCAATCTTT+AGG | + | chr8.3:62242801-62242820 | None:intergenic | 30.0% | |
| GGGATAAATATAAGATAGCT+AGG | + | chr8.3:62242869-62242888 | None:intergenic | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr8.3:62241121-62241140 | MS.gene57541:intron | 30.0% | |
| GTTGAATGAGAAATGTTTGT+AGG | - | chr8.3:62239111-62239130 | MS.gene57541:intron | 30.0% | |
| TAGAAACAAGACGGAATATA+TGG | + | chr8.3:62241734-62241753 | None:intergenic | 30.0% | |
| TATTGTTATGGGAAAATCTC+CGG | - | chr8.3:62241954-62241973 | MS.gene57541:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr8.3:62241114-62241133 | None:intergenic | 30.0% | |
| TGAACCATTCTAAACTCTAA+AGG | + | chr8.3:62240538-62240557 | None:intergenic | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr8.3:62241714-62241733 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr8.3:62241117-62241136 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr8.3:62241639-62241658 | None:intergenic | 30.0% | |
| TTCCAACACAAGATATTAGA+GGG | + | chr8.3:62243104-62243123 | None:intergenic | 30.0% | |
| TTCCAATCTATAAGAACAAG+GGG | + | chr8.3:62242347-62242366 | None:intergenic | 30.0% | |
| TTCCACAACTTATTTAACGA+AGG | + | chr8.3:62242630-62242649 | None:intergenic | 30.0% | |
| TTCCCTGTATGTTAATATGA+AGG | - | chr8.3:62240237-62240256 | MS.gene57541:intron | 30.0% | |
| TTTAGACTGTAAAGTCATAC+CGG | + | chr8.3:62243258-62243277 | None:intergenic | 30.0% | |
| ! | AAAGTTGATCAAATTCAACG+TGG | - | chr8.3:62238833-62238852 | MS.gene57541:CDS | 30.0% |
| ! | AACTGGTGAGTTATATTTTG+TGG | - | chr8.3:62240751-62240770 | MS.gene57541:intron | 30.0% |
| ! | AACTTTTCAACGAGATTATG+AGG | + | chr8.3:62242410-62242429 | None:intergenic | 30.0% |
| ! | AATTACAAAGCGATTTTCAG+AGG | + | chr8.3:62240670-62240689 | None:intergenic | 30.0% |
| ! | AGATCGATTTCTTTCTCATT+AGG | + | chr8.3:62243301-62243320 | None:intergenic | 30.0% |
| ! | ATTTGGTTTAGTGTGTGATT+AGG | - | chr8.3:62240687-62240706 | MS.gene57541:intron | 30.0% |
| ! | CAATAGCAAATACGTGTTTT+AGG | + | chr8.3:62243373-62243392 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr8.3:62241156-62241175 | MS.gene57541:intron | 30.0% |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr8.3:62241307-62241326 | MS.gene57541:intron | 30.0% |
| ! | TGATGATGCTATGAATTTGT+TGG | - | chr8.3:62243789-62243808 | MS.gene57541:intron | 30.0% |
| !! | AGAAAAGATTTTTCTAGGAG+GGG | + | chr8.3:62243519-62243538 | None:intergenic | 30.0% |
| !! | ATTTTTAAGCTTTGGTACAC+GGG | + | chr8.3:62243770-62243789 | None:intergenic | 30.0% |
| !! | CATTTTTAAGCTTTGGTACA+CGG | + | chr8.3:62243771-62243790 | None:intergenic | 30.0% |
| !! | CTGCATTAACTATTTCTAGA+TGG | - | chr8.3:62240878-62240897 | MS.gene57541:intron | 30.0% |
| !! | GAGAAAAGATTTTTCTAGGA+GGG | + | chr8.3:62243520-62243539 | None:intergenic | 30.0% |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | chr8.3:62242118-62242137 | None:intergenic | 30.0% |
| !! | GCATCATCATTTTTAAGCTT+TGG | + | chr8.3:62243778-62243797 | None:intergenic | 30.0% |
| !! | TCAACCTTTAGAGTTTAGAA+TGG | - | chr8.3:62240531-62240550 | MS.gene57541:intron | 30.0% |
| !!! | AGAGAGATTGTTTTAGAGAT+TGG | + | chr8.3:62242917-62242936 | None:intergenic | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr8.3:62242112-62242131 | None:intergenic | 30.0% |
| !!! | CTATGCACACTTTATTTTGA+TGG | + | chr8.3:62239402-62239421 | None:intergenic | 30.0% |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr8.3:62241893-62241912 | None:intergenic | 30.0% |
| AAAGTTACTAAACACCCGTT+TGG | + | chr8.3:62239270-62239289 | None:intergenic | 35.0% | |
| AACTACCCAACTTAGAGTAA+TGG | + | chr8.3:62243225-62243244 | None:intergenic | 35.0% | |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr8.3:62241706-62241725 | None:intergenic | 35.0% | |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr8.3:62241505-62241524 | MS.gene57541:intron | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | + | chr8.3:62242238-62242257 | None:intergenic | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr8.3:62241233-62241252 | None:intergenic | 35.0% | |
| AATCAAGTGGTGGCATTTAA+AGG | + | chr8.3:62243144-62243163 | None:intergenic | 35.0% | |
| AATTGTCATGTGATTGTGCA+TGG | - | chr8.3:62240001-62240020 | MS.gene57541:intron | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | + | chr8.3:62242319-62242338 | None:intergenic | 35.0% | |
| ACAGTGTTCAGAGTAAAGTT+CGG | + | chr8.3:62242944-62242963 | None:intergenic | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr8.3:62241705-62241724 | None:intergenic | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr8.3:62241366-62241385 | None:intergenic | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr8.3:62241149-62241168 | None:intergenic | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr8.3:62241314-62241333 | None:intergenic | 35.0% | |
| AGCCGATGAAAAATCTAAGA+TGG | - | chr8.3:62243403-62243422 | MS.gene57541:intron | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr8.3:62241501-62241520 | None:intergenic | 35.0% | |
| AGTGTAAAAATGCCGAAACT+TGG | + | chr8.3:62242890-62242909 | None:intergenic | 35.0% | |
| ATACCAATCTTTAGGTACCA+AGG | + | chr8.3:62242793-62242812 | None:intergenic | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | + | chr8.3:62242278-62242297 | None:intergenic | 35.0% | |
| ATAGATCATTGCATTTCCTC+AGG | + | chr8.3:62240569-62240588 | None:intergenic | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr8.3:62241654-62241673 | None:intergenic | 35.0% | |
| ATCAAGTGGTGGCATTTAAA+GGG | + | chr8.3:62243143-62243162 | None:intergenic | 35.0% | |
| ATCAATTACATTCCGAGTCT+CGG | + | chr8.3:62240810-62240829 | None:intergenic | 35.0% | |
| ATCTATATACAAGCTTGCGA+AGG | + | chr8.3:62242760-62242779 | None:intergenic | 35.0% | |
| ATCTCATCACTTACAAGAGT+GGG | + | chr8.3:62243337-62243356 | None:intergenic | 35.0% | |
| ATTAGCATTTCTTACCTCTC+TGG | - | chr8.3:62240173-62240192 | MS.gene57541:intron | 35.0% | |
| CAGATTCACTTAGATTGAAC+TGG | + | chr8.3:62239927-62239946 | None:intergenic | 35.0% | |
| CATCACCATTACTCTAAGTT+GGG | - | chr8.3:62243217-62243236 | MS.gene57541:intron | 35.0% | |
| CATCCTTAATACACTTCACT+TGG | - | chr8.3:62242706-62242725 | MS.gene57541:CDS | 35.0% | |
| CCTCCCAAAACTTTACTTTA+AGG | - | chr8.3:62243573-62243592 | MS.gene57541:intron | 35.0% | |
| CTAGATTGCACATGTTGTTA+AGG | - | chr8.3:62240912-62240931 | MS.gene57541:intron | 35.0% | |
| CTTGAACTATATGCATATGC+AGG | - | chr8.3:62243914-62243933 | MS.gene57541:intron | 35.0% | |
| GAAAATAGGCTTAGATGGTT+TGG | + | chr8.3:62241289-62241308 | None:intergenic | 35.0% | |
| GAAGTGTATTAAGGATGAAG+AGG | + | chr8.3:62242703-62242722 | None:intergenic | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | chr8.3:62242283-62242302 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr8.3:62241641-62241660 | MS.gene57541:intron | 35.0% | |
| GCATATGCATATAGTTCAAG+AGG | + | chr8.3:62243914-62243933 | None:intergenic | 35.0% | |
| GCTACATATACGGATTTCAT+GGG | - | chr8.3:62239578-62239597 | MS.gene57541:intron | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr8.3:62241236-62241255 | None:intergenic | 35.0% | |
| GTATTGTGTCTTCGATAAGA+AGG | + | chr8.3:62239296-62239315 | None:intergenic | 35.0% | |
| GTGTAAAAATGCCGAAACTT+GGG | + | chr8.3:62242889-62242908 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr8.3:62241640-62241659 | None:intergenic | 35.0% | |
| TAACAACATGTGCAATCTAG+AGG | + | chr8.3:62240912-62240931 | None:intergenic | 35.0% | |
| TAACTATTATCGTCGGATTC+AGG | + | chr8.3:62242550-62242569 | None:intergenic | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | + | chr8.3:62242320-62242339 | None:intergenic | 35.0% | |
| TACATCATCGTATTCAAGCT+GGG | + | chr8.3:62241579-62241598 | None:intergenic | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | + | chr8.3:62242277-62242296 | None:intergenic | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr8.3:62241643-62241662 | MS.gene57541:intron | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | + | chr8.3:62242346-62242365 | None:intergenic | 35.0% | |
| TCTATATACAAGCTTGCGAA+GGG | + | chr8.3:62242759-62242778 | None:intergenic | 35.0% | |
| TGAAATCCGTATATGTAGCA+CGG | + | chr8.3:62239577-62239596 | None:intergenic | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | chr8.3:62242284-62242303 | None:intergenic | 35.0% | |
| TGCTACATATACGGATTTCA+TGG | - | chr8.3:62239577-62239596 | MS.gene57541:intron | 35.0% | |
| TGGTAGAAAATAGGCTTAGA+TGG | + | chr8.3:62241294-62241313 | None:intergenic | 35.0% | |
| TTAGACTGTAAAGTCATACC+GGG | + | chr8.3:62243257-62243276 | None:intergenic | 35.0% | |
| TTATCTTGATCCGACAATCA+CGG | - | chr8.3:62239767-62239786 | MS.gene57541:intron | 35.0% | |
| TTCAAGATATCTTGACTGCA+TGG | - | chr8.3:62239808-62239827 | MS.gene57541:intron | 35.0% | |
| TTCTCATTAGGAAAACAGAC+AGG | + | chr8.3:62243289-62243308 | None:intergenic | 35.0% | |
| TTGATCAAATTCAACGTGGT+CGG | - | chr8.3:62238837-62238856 | MS.gene57541:CDS | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr8.3:62241237-62241256 | MS.gene57541:intron | 35.0% | |
| TTGTTCCACTACACACTTTA+AGG | - | chr8.3:62243649-62243668 | MS.gene57541:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr8.3:62241514-62241533 | None:intergenic | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr8.3:62241137-62241156 | None:intergenic | 35.0% |
| ! | GGAGAAAAGATTTTTCTAGG+AGG | + | chr8.3:62243521-62243540 | None:intergenic | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | chr8.3:62241955-62241974 | None:intergenic | 35.0% |
| ! | GGATCGATCTTTTTATAGGA+TGG | - | chr8.3:62240708-62240727 | MS.gene57541:intron | 35.0% |
| ! | GTAATTATATGTGTCGGTGT+TGG | - | chr8.3:62239364-62239383 | MS.gene57541:intron | 35.0% |
| ! | TATAGCCTTAAAGTGTGTAG+TGG | + | chr8.3:62243657-62243676 | None:intergenic | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr8.3:62241847-62241866 | MS.gene57541:intron | 35.0% |
| !! | AGGACAAGGAACTTTTTCTT+GGG | - | chr8.3:62240147-62240166 | MS.gene57541:intron | 35.0% |
| !! | AGTAATGGTGATGGATGTAA+GGG | + | chr8.3:62243210-62243229 | None:intergenic | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr8.3:62242023-62242042 | MS.gene57541:intron | 35.0% |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr8.3:62241612-62241631 | MS.gene57541:intron | 35.0% |
| !!! | AACCAATTTGGTTTTATGCC+TGG | + | chr8.3:62242213-62242232 | None:intergenic | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | + | chr8.3:62242212-62242231 | None:intergenic | 35.0% |
| !!! | ATGTGAGTTCTTGTTTTCAC+CGG | - | chr8.3:62240207-62240226 | MS.gene57541:intron | 35.0% |
| !!! | CCTTAAAGTAAAGTTTTGGG+AGG | + | chr8.3:62243576-62243595 | None:intergenic | 35.0% |
| !!! | GGTTTTGTTAATTCGGTATG+TGG | - | chr8.3:62238992-62239011 | MS.gene57541:intron | 35.0% |
| !!! | TACGTGTTTTAGGAAAAGAG+AGG | + | chr8.3:62243363-62243382 | None:intergenic | 35.0% |
| AAGCCATAAAGGACTGTAAC+TGG | - | chr8.3:62240734-62240753 | MS.gene57541:intron | 40.0% | |
| AAGGTGGCAAAAGAGACATT+GGG | + | chr8.3:62243017-62243036 | None:intergenic | 40.0% | |
| AATCTTTAGGTACCAAGGAG+GGG | + | chr8.3:62242788-62242807 | None:intergenic | 40.0% | |
| ACAACATACCTATCGAAGTG+TGG | + | chr8.3:62242470-62242489 | None:intergenic | 40.0% | |
| ACATACAGGGAAAGAATCAC+CGG | + | chr8.3:62240229-62240248 | None:intergenic | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr8.3:62241339-62241358 | None:intergenic | 40.0% | |
| ACTAGAGAGTAAAGTGCATG+TGG | + | chr8.3:62243850-62243869 | None:intergenic | 40.0% | |
| ACTTCGATAGGTATGTTGTC+CGG | - | chr8.3:62242471-62242490 | MS.gene57541:intron | 40.0% | |
| AGATATTAGAGGGAGGTTTG+AGG | + | chr8.3:62243094-62243113 | None:intergenic | 40.0% | |
| AGATCTTACCAGACTCTAAC+AGG | + | chr8.3:62242602-62242621 | None:intergenic | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr8.3:62242016-62242035 | None:intergenic | 40.0% | |
| AGTCACTCAATCTGTCGTAT+CGG | - | chr8.3:62240851-62240870 | MS.gene57541:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr8.3:62241208-62241227 | None:intergenic | 40.0% | |
| AGTTGACAGAACTTCAACCA+AGG | + | chr8.3:62240102-62240121 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr8.3:62241943-62241962 | None:intergenic | 40.0% | |
| ATATCATTAGCGCTTCCATG+TGG | - | chr8.3:62243065-62243084 | MS.gene57541:intron | 40.0% | |
| ATCGAAGTGTGGAAAAGTCT+TGG | + | chr8.3:62242459-62242478 | None:intergenic | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr8.3:62241675-62241694 | MS.gene57541:intron | 40.0% | |
| ATGTCTAACCTGTTAGAGTC+TGG | - | chr8.3:62242591-62242610 | MS.gene57541:intron | 40.0% | |
| ATTGAGTGACTGCGAAGTTA+TGG | + | chr8.3:62240842-62240861 | None:intergenic | 40.0% | |
| CAACACAAGATATTAGAGGG+AGG | + | chr8.3:62243101-62243120 | None:intergenic | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | + | chr8.3:62242318-62242337 | None:intergenic | 40.0% | |
| CAATCTTTAGGTACCAAGGA+GGG | + | chr8.3:62242789-62242808 | None:intergenic | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | + | chr8.3:62242225-62242244 | None:intergenic | 40.0% | |
| CATCTCATCACTTACAAGAG+TGG | + | chr8.3:62243338-62243357 | None:intergenic | 40.0% | |
| CCAACTTAGAGTAATGGTGA+TGG | + | chr8.3:62243219-62243238 | None:intergenic | 40.0% | |
| CCATCACCATTACTCTAAGT+TGG | - | chr8.3:62243216-62243235 | MS.gene57541:intron | 40.0% | |
| CCTGAAAACTGTAACACAGA+TGG | - | chr8.3:62238779-62238798 | MS.gene57541:CDS | 40.0% | |
| CGAAGTTAGATCGAGAAATG+GGG | + | chr8.3:62243747-62243766 | None:intergenic | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr8.3:62242014-62242033 | None:intergenic | 40.0% | |
| CTCCCTCTAATATCTTGTGT+TGG | - | chr8.3:62243099-62243118 | MS.gene57541:intron | 40.0% | |
| GAAAAGGAGGTTACACAGAT+AGG | + | chr8.3:62238890-62238909 | None:intergenic | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | + | chr8.3:62242505-62242524 | None:intergenic | 40.0% | |
| GAAATCCGTATATGTAGCAC+GGG | + | chr8.3:62239576-62239595 | None:intergenic | 40.0% | |
| GAAATCGATCTGAGAACAAG+AGG | - | chr8.3:62243310-62243329 | MS.gene57541:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr8.3:62241340-62241359 | None:intergenic | 40.0% | |
| GACGATCAGAATTTCAAGCT+CGG | + | chr8.3:62239747-62239766 | None:intergenic | 40.0% | |
| GAGTAAAGTGCATGTGGTAA+TGG | + | chr8.3:62243844-62243863 | None:intergenic | 40.0% | |
| GATGGCTCATGAGATTAAGA+AGG | + | chr8.3:62243036-62243055 | None:intergenic | 40.0% | |
| GCGAAGTTAGATCGAGAAAT+GGG | + | chr8.3:62243748-62243767 | None:intergenic | 40.0% | |
| GCGTTGAAAAGGATGAGTAA+TGG | + | chr8.3:62242510-62242529 | None:intergenic | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr8.3:62242015-62242034 | None:intergenic | 40.0% | |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr8.3:62242072-62242091 | MS.gene57541:intron | 40.0% | |
| GGAAACTGGCATGTTATAGA+AGG | + | chr8.3:62244051-62244070 | None:intergenic | 40.0% | |
| GGACCAAGTGAAGTGTATTA+AGG | + | chr8.3:62242712-62242731 | None:intergenic | 40.0% | |
| GGAGCTAGAAGGATTAATTC+AGG | + | chr8.3:62243555-62243574 | None:intergenic | 40.0% | |
| GGAGTGGAAGAAAGATATTG+TGG | + | chr8.3:62243705-62243724 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr8.3:62241619-62241638 | None:intergenic | 40.0% | |
| GGTGCAAGAGAGAGATATTA+AGG | + | chr8.3:62242670-62242689 | None:intergenic | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | chr8.3:62241580-62241599 | None:intergenic | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr8.3:62241372-62241391 | None:intergenic | 40.0% | |
| GTTCAAAGTCCAATTGACTG+TGG | - | chr8.3:62240289-62240308 | MS.gene57541:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr8.3:62241942-62241961 | None:intergenic | 40.0% | |
| TAACAGGTTAGACATCAGAG+AGG | + | chr8.3:62242586-62242605 | None:intergenic | 40.0% | |
| TAATACACTTCACTTGGTCC+AGG | - | chr8.3:62242712-62242731 | MS.gene57541:CDS | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | - | chr8.3:62242272-62242291 | MS.gene57541:intron | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr8.3:62242013-62242032 | None:intergenic | 40.0% | |
| TATGAGGACGAAGAAAATGC+CGG | + | chr8.3:62242394-62242413 | None:intergenic | 40.0% | |
| TCAATTGGACTTTGAACGTG+CGG | + | chr8.3:62240286-62240305 | None:intergenic | 40.0% | |
| TCACCAGTTACAGTCCTTTA+TGG | + | chr8.3:62240740-62240759 | None:intergenic | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | - | chr8.3:62242208-62242227 | MS.gene57541:intron | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | - | chr8.3:62242342-62242361 | MS.gene57541:intron | 40.0% | |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr8.3:62241682-62241701 | None:intergenic | 40.0% | |
| TCTCATCACTTACAAGAGTG+GGG | + | chr8.3:62243336-62243355 | None:intergenic | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr8.3:62241341-62241360 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr8.3:62242028-62242047 | None:intergenic | 40.0% | |
| TGGATATCCATGCGTTTACA+CGG | - | chr8.3:62239658-62239677 | MS.gene57541:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr8.3:62241943-62241962 | MS.gene57541:intron | 40.0% | |
| TGTATGGAACCACAGTCAAT+TGG | + | chr8.3:62240301-62240320 | None:intergenic | 40.0% | |
| TTCTAGTCGTAGCTTCGTAA+TGG | - | chr8.3:62240260-62240279 | MS.gene57541:intron | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr8.3:62241942-62241961 | MS.gene57541:intron | 40.0% | |
| TTGTGGTTCCTAGACATGAA+CGG | - | chr8.3:62240768-62240787 | MS.gene57541:intron | 40.0% | |
| ! | AAAATGGATTCCGTGCAGTA+GGG | - | chr8.3:62239633-62239652 | MS.gene57541:intron | 40.0% |
| ! | AGACTTTTCCACACTTCGAT+AGG | - | chr8.3:62242459-62242478 | MS.gene57541:intron | 40.0% |
| ! | CATTTATTGGAGTACCAGAG+AGG | + | chr8.3:62240190-62240209 | None:intergenic | 40.0% |
| ! | CCATCTGTGTTACAGTTTTC+AGG | + | chr8.3:62238782-62238801 | None:intergenic | 40.0% |
| ! | GAATTTCAAGCTCGGCATTT+TGG | + | chr8.3:62239739-62239758 | None:intergenic | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr8.3:62242080-62242099 | None:intergenic | 40.0% |
| ! | TGATGGATGTAAGGGTTAAG+AGG | + | chr8.3:62243202-62243221 | None:intergenic | 40.0% |
| ! | TGCATTTTATGTCCGAGACT+CGG | - | chr8.3:62240795-62240814 | MS.gene57541:intron | 40.0% |
| ! | TGCATTTTCCGTTCATGTCT+AGG | + | chr8.3:62240779-62240798 | None:intergenic | 40.0% |
| ! | TTCTAGGAGGGGATTTGAAT+GGG | + | chr8.3:62243508-62243527 | None:intergenic | 40.0% |
| ! | TTGGGAGAATCTAGAGGTTT+TGG | + | chr8.3:62242999-62243018 | None:intergenic | 40.0% |
| ! | TTTCTAGGAGGGGATTTGAA+TGG | + | chr8.3:62243509-62243528 | None:intergenic | 40.0% |
| ! | TTTTGAGCTAGGCTGGATAT+AGG | - | chr8.3:62239601-62239620 | MS.gene57541:intron | 40.0% |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | + | chr8.3:62242521-62242540 | None:intergenic | 40.0% |
| !! | ATGGAAGCGCTAATGATATG+TGG | + | chr8.3:62243064-62243083 | None:intergenic | 40.0% |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr8.3:62241737-62241756 | MS.gene57541:intron | 40.0% |
| !! | GAGGACAAGGAACTTTTTCT+TGG | - | chr8.3:62240146-62240165 | MS.gene57541:intron | 40.0% |
| !! | GAGTAATGGTGATGGATGTA+AGG | + | chr8.3:62243211-62243230 | None:intergenic | 40.0% |
| !! | GGACAAGGAACTTTTTCTTG+GGG | - | chr8.3:62240148-62240167 | MS.gene57541:intron | 40.0% |
| !! | GGATGAAGAGGGTATAGTTT+TGG | + | chr8.3:62242691-62242710 | None:intergenic | 40.0% |
| !! | GTGTTACAGTTTTCAGGAAC+CGG | + | chr8.3:62238776-62238795 | None:intergenic | 40.0% |
| !! | TGGAAGCGCTAATGATATGT+GGG | + | chr8.3:62243063-62243082 | None:intergenic | 40.0% |
| !!! | AATCTAGAGGTTTTGGACCT+AGG | + | chr8.3:62242992-62243011 | None:intergenic | 40.0% |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | + | chr8.3:62242209-62242228 | None:intergenic | 40.0% |
| !!! | ATCTAGAGGTTTTGGACCTA+GGG | + | chr8.3:62242991-62243010 | None:intergenic | 40.0% |
| !!! | GATTTCATGGGTTTTGAGCT+AGG | - | chr8.3:62239590-62239609 | MS.gene57541:intron | 40.0% |
| AAATGGGGTAGGCATCATTG+TGG | + | chr8.3:62243732-62243751 | None:intergenic | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr8.3:62241067-62241086 | MS.gene57541:intron | 45.0% | |
| AACTGTAGTTGCTGAGGACA+AGG | - | chr8.3:62240133-62240152 | MS.gene57541:intron | 45.0% | |
| AAGGAGGTTACACAGATAGG+TGG | + | chr8.3:62238887-62238906 | None:intergenic | 45.0% | |
| AATGCCTCTGTGGTGAAAAG+TGG | - | chr8.3:62243951-62243970 | MS.gene57541:CDS | 45.0% | |
| AATTAGCGCTTATGCACCTC+AGG | + | chr8.3:62243615-62243634 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr8.3:62241467-62241486 | None:intergenic | 45.0% | |
| AGAACGAAAGACAAGAGACC+TGG | + | chr8.3:62242733-62242752 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr8.3:62241224-62241243 | None:intergenic | 45.0% | |
| AGCTAGGAAAGAGGCTAAGA+AGG | + | chr8.3:62242853-62242872 | None:intergenic | 45.0% | |
| AGTCTTGGCGATAGAGGAAT+TGG | + | chr8.3:62242444-62242463 | None:intergenic | 45.0% | |
| AGTTGAAGCTAATGCCTCTG+TGG | - | chr8.3:62243941-62243960 | MS.gene57541:intron | 45.0% | |
| ATCAGCACATCCGTGATTGT+CGG | + | chr8.3:62239780-62239799 | None:intergenic | 45.0% | |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr8.3:62241576-62241595 | None:intergenic | 45.0% | |
| ATCTTTAGGTACCAAGGAGG+GGG | + | chr8.3:62242787-62242806 | None:intergenic | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | + | chr8.3:62242498-62242517 | None:intergenic | 45.0% | |
| ATGGTTCATTATGCTGCCTG+AGG | - | chr8.3:62240550-62240569 | MS.gene57541:intron | 45.0% | |
| ATTTGAATGGGCATGTAGGG+AGG | + | chr8.3:62243496-62243515 | None:intergenic | 45.0% | |
| CACCAAGATTCTTTACCCCT+AGG | - | chr8.3:62242972-62242991 | MS.gene57541:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr8.3:62241338-62241357 | None:intergenic | 45.0% | |
| CCAATCTTTAGGTACCAAGG+AGG | + | chr8.3:62242790-62242809 | None:intergenic | 45.0% | |
| CCTCCTTGGTACCTAAAGAT+TGG | - | chr8.3:62242787-62242806 | MS.gene57541:intron | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr8.3:62241419-62241438 | None:intergenic | 45.0% | |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr8.3:62241422-62241441 | MS.gene57541:intron | 45.0% | |
| CTAGGGGTAAAGAATCTTGG+TGG | + | chr8.3:62242974-62242993 | None:intergenic | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr8.3:62241534-62241553 | MS.gene57541:intron | 45.0% | |
| GAAGGTGGCAAAAGAGACAT+TGG | + | chr8.3:62243018-62243037 | None:intergenic | 45.0% | |
| GACCTAGGGGTAAAGAATCT+TGG | + | chr8.3:62242977-62242996 | None:intergenic | 45.0% | |
| GAGACATTGGGAGAATCTAG+AGG | + | chr8.3:62243005-62243024 | None:intergenic | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr8.3:62241214-62241233 | None:intergenic | 45.0% | |
| GATATCCAATCCCTACTGCA+CGG | + | chr8.3:62239646-62239665 | None:intergenic | 45.0% | |
| GCATCATTGTGGATAAGGAG+TGG | + | chr8.3:62243721-62243740 | None:intergenic | 45.0% | |
| GCGAGAACTCAAGCATTTGA+AGG | + | chr8.3:62242819-62242838 | None:intergenic | 45.0% | |
| GGATGTAAGGGTTAAGAGGA+GGG | + | chr8.3:62243198-62243217 | None:intergenic | 45.0% | |
| GGCGAAGTTAGATCGAGAAA+TGG | + | chr8.3:62243749-62243768 | None:intergenic | 45.0% | |
| GGCTCATGAGATTAAGAAGG+TGG | + | chr8.3:62243033-62243052 | None:intergenic | 45.0% | |
| GGGATTTGAATGGGCATGTA+GGG | + | chr8.3:62243499-62243518 | None:intergenic | 45.0% | |
| GGTAGGCATCATTGTGGATA+AGG | + | chr8.3:62243726-62243745 | None:intergenic | 45.0% | |
| GGTTACACAGATAGGTGGTT+TGG | + | chr8.3:62238882-62238901 | None:intergenic | 45.0% | |
| GTCTTGGCGATAGAGGAATT+GGG | + | chr8.3:62242443-62242462 | None:intergenic | 45.0% | |
| GTTAGATCGAGAAATGGGGT+AGG | + | chr8.3:62243743-62243762 | None:intergenic | 45.0% | |
| TAGGAAAGAGGCTAAGAAGG+CGG | + | chr8.3:62242850-62242869 | None:intergenic | 45.0% | |
| TAGGATGGCTGAAGCCATAA+AGG | - | chr8.3:62240723-62240742 | MS.gene57541:intron | 45.0% | |
| TATAGATTTCTCCCCCTCCT+TGG | - | chr8.3:62242773-62242792 | MS.gene57541:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr8.3:62241463-62241482 | MS.gene57541:intron | 45.0% | |
| TCTTTGTCGGAACTGCAGAA+TGG | - | chr8.3:62240044-62240063 | MS.gene57541:intron | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | + | chr8.3:62242497-62242516 | None:intergenic | 45.0% | |
| TGCTAGAACTGTAGTTGCTG+AGG | - | chr8.3:62240127-62240146 | MS.gene57541:intron | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | + | chr8.3:62242450-62242469 | None:intergenic | 45.0% | |
| TGGATGTAAGGGTTAAGAGG+AGG | + | chr8.3:62243199-62243218 | None:intergenic | 45.0% | |
| TGTAAAGTCATACCGGGAGA+GGG | + | chr8.3:62243251-62243270 | None:intergenic | 45.0% | |
| TGTTCTTCTAGTCCTACCTG+AGG | - | chr8.3:62243596-62243615 | MS.gene57541:intron | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr8.3:62241459-62241478 | None:intergenic | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr8.3:62241567-62241586 | None:intergenic | 45.0% | |
| TTCGAAACAGCAGAGCAAAG+CGG | - | chr8.3:62240601-62240620 | MS.gene57541:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr8.3:62241553-62241572 | None:intergenic | 45.0% | |
| TTGCACCCGTGCTACATATA+CGG | - | chr8.3:62239568-62239587 | MS.gene57541:intron | 45.0% | |
| TTTGAATGGGCATGTAGGGA+GGG | + | chr8.3:62243495-62243514 | None:intergenic | 45.0% | |
| ! | AAATGCCACCACTTGATTCG+CGG | - | chr8.3:62243146-62243165 | MS.gene57541:intron | 45.0% |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr8.3:62242070-62242089 | None:intergenic | 45.0% |
| ! | GAAAATGGATTCCGTGCAGT+AGG | - | chr8.3:62239632-62239651 | MS.gene57541:intron | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr8.3:62241832-62241851 | None:intergenic | 45.0% |
| ! | GCTGTTTCGAAATGCAACTG+AGG | + | chr8.3:62240592-62240611 | None:intergenic | 45.0% |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr8.3:62241458-62241477 | None:intergenic | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr8.3:62241860-62241879 | MS.gene57541:intron | 45.0% |
| !! | TCTTCCACTTTTCACCACAG+AGG | + | chr8.3:62243958-62243977 | None:intergenic | 45.0% |
| !!! | AAGTTTTGGGAGGAGCTAGA+AGG | + | chr8.3:62243566-62243585 | None:intergenic | 45.0% |
| !!! | TCTAGAGGTTTTGGACCTAG+GGG | + | chr8.3:62242990-62243009 | None:intergenic | 45.0% |
| AAAGAGAAGAGACCGTAGCG+GGG | + | chr8.3:62243174-62243193 | None:intergenic | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | - | chr8.3:62242007-62242026 | MS.gene57541:intron | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr8.3:62241923-62241942 | MS.gene57541:intron | 50.0% | |
| AATGGGAGACTTGTCCGTGT+CGG | - | chr8.3:62239497-62239516 | MS.gene57541:intron | 50.0% | |
| ACAGTGACCGTGTAAACGCA+TGG | + | chr8.3:62239668-62239687 | None:intergenic | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr8.3:62241068-62241087 | MS.gene57541:intron | 50.0% | |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr8.3:62241391-62241410 | None:intergenic | 50.0% | |
| AGGGTTTCGAGAGGTTTCGA+GGG | + | chr8.3:62243476-62243495 | None:intergenic | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr8.3:62241807-62241826 | None:intergenic | 50.0% | |
| CAAAGAGAAGAGACCGTAGC+GGG | + | chr8.3:62243175-62243194 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr8.3:62241066-62241085 | MS.gene57541:intron | 50.0% | |
| CAGGTTAGACATCAGAGAGG+AGG | + | chr8.3:62242583-62242602 | None:intergenic | 50.0% | |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr8.3:62241743-62241762 | None:intergenic | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | chr8.3:62242169-62242188 | None:intergenic | 50.0% | |
| CTGTAAAGTCATACCGGGAG+AGG | + | chr8.3:62243252-62243271 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr8.3:62241072-62241091 | MS.gene57541:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr8.3:62242058-62242077 | None:intergenic | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr8.3:62241692-62241711 | None:intergenic | 50.0% | |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr8.3:62241808-62241827 | None:intergenic | 50.0% | |
| GATACGACACGTATCCGACA+CGG | + | chr8.3:62239514-62239533 | None:intergenic | 50.0% | |
| GCAAAGAGAAGAGACCGTAG+CGG | + | chr8.3:62243176-62243195 | None:intergenic | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr8.3:62242059-62242078 | None:intergenic | 50.0% | |
| GGGGATTTGAATGGGCATGT+AGG | + | chr8.3:62243500-62243519 | None:intergenic | 50.0% | |
| GGGGTAAAGAATCTTGGTGG+TGG | + | chr8.3:62242971-62242990 | None:intergenic | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr8.3:62241472-62241491 | None:intergenic | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr8.3:62241792-62241811 | None:intergenic | 50.0% | |
| TCGGAACTGCAGAATGGCTA+CGG | - | chr8.3:62240050-62240069 | MS.gene57541:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr8.3:62241246-62241265 | MS.gene57541:intron | 50.0% | |
| TGCGTTTACACGGTCACTGT+TGG | - | chr8.3:62239668-62239687 | MS.gene57541:intron | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr8.3:62242060-62242079 | None:intergenic | 50.0% | |
| TTGGCGATAGAGGAATTGGG+TGG | + | chr8.3:62242440-62242459 | None:intergenic | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr8.3:62241411-62241430 | None:intergenic | 50.0% |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr8.3:62241769-62241788 | None:intergenic | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr8.3:62241821-62241840 | None:intergenic | 50.0% |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr8.3:62241822-62241841 | None:intergenic | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr8.3:62241740-62241759 | MS.gene57541:intron | 50.0% |
| !!! | TCATGGGTTTTGAGCTAGGC+TGG | - | chr8.3:62239594-62239613 | MS.gene57541:intron | 50.0% |
| AATGGCTACGGAACGCTGCA+TGG | - | chr8.3:62240062-62240081 | MS.gene57541:intron | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr8.3:62241080-62241099 | MS.gene57541:intron | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | chr8.3:62241985-62242004 | None:intergenic | 55.0% | |
| AGCGCTTATGCACCTCAGGT+AGG | + | chr8.3:62243611-62243630 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr8.3:62241081-62241100 | None:intergenic | 55.0% | |
| CATGTAGGGAGGGTTTCGAG+AGG | + | chr8.3:62243485-62243504 | None:intergenic | 55.0% | |
| CCTCACCCCTTTCTTCTCCA+GGG | - | chr8.3:62242050-62242069 | MS.gene57541:intron | 55.0% | |
| CGAAGAAAATGCCGGACGAG+TGG | + | chr8.3:62242386-62242405 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr8.3:62241074-62241093 | None:intergenic | 55.0% | |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr8.3:62241399-62241418 | None:intergenic | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | chr8.3:62241984-62242003 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr8.3:62241485-62241504 | None:intergenic | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr8.3:62241247-62241266 | MS.gene57541:intron | 55.0% | |
| GAAACAGCAGAGCAAAGCGG+AGG | - | chr8.3:62240604-62240623 | MS.gene57541:intron | 55.0% | |
| GAGGGTTTCGAGAGGTTTCG+AGG | + | chr8.3:62243477-62243496 | None:intergenic | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | - | chr8.3:62241759-62241778 | MS.gene57541:intron | 55.0% | |
| GGATTCCGTGCAGTAGGGAT+TGG | - | chr8.3:62239638-62239657 | MS.gene57541:intron | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+CGG | - | chr8.3:62242372-62242391 | MS.gene57541:intron | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | + | chr8.3:62242493-62242512 | None:intergenic | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | chr8.3:62241983-62242002 | None:intergenic | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | + | chr8.3:62242199-62242218 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | chr8.3:62242049-62242068 | MS.gene57541:intron | 55.0% | |
| TGGGTAGTTAAGCCCTCTCC+CGG | - | chr8.3:62243236-62243255 | MS.gene57541:intron | 55.0% | |
| TGGTCTCGGGGAGGTAAATG+CGG | + | chr8.3:62243438-62243457 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr8.3:62241080-62241099 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | + | chr8.3:62241989-62242008 | None:intergenic | 55.0% | |
| ! | CGTGATGGAGCGATATCGGA+CGG | + | chr8.3:62242154-62242173 | None:intergenic | 55.0% |
| ! | GACGCGTGATGGAGCGATAT+CGG | + | chr8.3:62242158-62242177 | None:intergenic | 55.0% |
| ! | GGAGGTTTGAGGCAACCACA+TGG | + | chr8.3:62243083-62243102 | None:intergenic | 55.0% |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr8.3:62241455-62241474 | None:intergenic | 55.0% |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr8.3:62241789-62241808 | None:intergenic | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | + | chr8.3:62241976-62241995 | None:intergenic | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | + | chr8.3:62241996-62242015 | None:intergenic | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | chr8.3:62242053-62242072 | None:intergenic | 60.0% | |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr8.3:62241804-62241823 | None:intergenic | 60.0% | |
| CTCGGGGAGGTAAATGCGGA+GGG | + | chr8.3:62243434-62243453 | None:intergenic | 60.0% | |
| GCTTCCATAGTCGACCTCCC+AGG | - | chr8.3:62242192-62242211 | MS.gene57541:intron | 60.0% | |
| TCTCGGGGAGGTAAATGCGG+AGG | + | chr8.3:62243435-62243454 | None:intergenic | 60.0% | |
| ! | AGAGGTTTCGAGGGCGTGCA+TGG | + | chr8.3:62243467-62243486 | None:intergenic | 60.0% |
| ! | AGGTTTCGAGGGCGTGCATG+GGG | + | chr8.3:62243465-62243484 | None:intergenic | 60.0% |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr8.3:62241818-62241837 | None:intergenic | 60.0% |
| ! | GAGGTTTCGAGGGCGTGCAT+GGG | + | chr8.3:62243466-62243485 | None:intergenic | 60.0% |
| ! | GTGCATGGGGGGTATGGTCT+CGG | + | chr8.3:62243452-62243471 | None:intergenic | 60.0% |
| ! | TCGTCGGATTCAGGAGCACG+AGG | + | chr8.3:62242541-62242560 | None:intergenic | 60.0% |
| ! | TGCATGGGGGGTATGGTCTC+GGG | + | chr8.3:62243451-62243470 | None:intergenic | 60.0% |
| !! | TGGAGGCGCTGTTGGTTCCT+TGG | - | chr8.3:62240082-62240101 | MS.gene57541:intron | 60.0% |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr8.3:62241257-62241276 | None:intergenic | 65.0% | |
| GGCTACGGAACGCTGCATGG+AGG | - | chr8.3:62240065-62240084 | MS.gene57541:intron | 65.0% | |
| GGGCTCCGCGAATCAAGTGG+TGG | + | chr8.3:62243154-62243173 | None:intergenic | 65.0% | |
| TGATTCGCGGAGCCCCGCTA+CGG | - | chr8.3:62243159-62243178 | MS.gene57541:intron | 65.0% | |
| ! | GCATGGGGGGTATGGTCTCG+GGG | + | chr8.3:62243450-62243469 | None:intergenic | 65.0% |
| ! | GGTTTCGAGGGCGTGCATGG+GGG | + | chr8.3:62243464-62243483 | None:intergenic | 65.0% |
| ! | GTTTCGAGGGCGTGCATGGG+GGG | + | chr8.3:62243463-62243482 | None:intergenic | 65.0% |
| !! | ACGCTGCATGGAGGCGCTGT+TGG | - | chr8.3:62240074-62240093 | MS.gene57541:intron | 65.0% |
| GCGGGGCTCCGCGAATCAAG+TGG | + | chr8.3:62243157-62243176 | None:intergenic | 70.0% | |
| ! | GAGGGCGTGCATGGGGGGTA+TGG | + | chr8.3:62243458-62243477 | None:intergenic | 70.0% |
| ! | TGGGGGGTATGGTCTCGGGG+AGG | + | chr8.3:62243447-62243466 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 62238758 | 62244079 | 62238758 | ID=MS.gene57541 |
| chr8.3 | mRNA | 62238758 | 62244079 | 62238758 | ID=MS.gene57541.t1;Parent=MS.gene57541 |
| chr8.3 | exon | 62243942 | 62244079 | 62243942 | ID=MS.gene57541.t1.exon1;Parent=MS.gene57541.t1 |
| chr8.3 | CDS | 62243942 | 62244079 | 62243942 | ID=cds.MS.gene57541.t1;Parent=MS.gene57541.t1 |
| chr8.3 | exon | 62242629 | 62242775 | 62242629 | ID=MS.gene57541.t1.exon2;Parent=MS.gene57541.t1 |
| chr8.3 | CDS | 62242629 | 62242775 | 62242629 | ID=cds.MS.gene57541.t1;Parent=MS.gene57541.t1 |
| chr8.3 | exon | 62238758 | 62238901 | 62238758 | ID=MS.gene57541.t1.exon3;Parent=MS.gene57541.t1 |
| chr8.3 | CDS | 62238758 | 62238901 | 62238758 | ID=cds.MS.gene57541.t1;Parent=MS.gene57541.t1 |
| Gene Sequence |
| Protein sequence |
