Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61305.t1 | XP_003608683.1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 5.80E-155 | 557 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61305.t1 | Q7XC57 | 58.5 | 325 | 117 | 8 | 1 | 320 | 1 | 312 | 2.9e-86 | 320.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61305.t1 | D5FFH1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 4.2e-155 | 557.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene61305.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049236 | MS.gene61305 | 0.809658 | 1.70E-50 | -1.69E-46 |
| MS.gene053562 | MS.gene61305 | 0.819922 | 9.00E-53 | -1.69E-46 |
| MS.gene054486 | MS.gene61305 | -0.808999 | 2.35E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene61305 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene059540 | MS.gene61305 | 0.814313 | 1.64E-51 | -1.69E-46 |
| MS.gene059749 | MS.gene61305 | -0.826386 | 2.79E-54 | -1.69E-46 |
| MS.gene060666 | MS.gene61305 | -0.813223 | 2.85E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene61305 | -0.822315 | 2.53E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61305.t1 | MTR_4g100630 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 669 |
| MS.gene61305.t1 | MTR_2g100930 | 51.744 | 344 | 139 | 11 | 1 | 323 | 1 | 338 | 3.20e-97 | 291 |
| MS.gene61305.t1 | MTR_5g037080 | 48.768 | 203 | 65 | 5 | 1 | 183 | 3 | 186 | 2.54e-48 | 164 |
| MS.gene61305.t1 | MTR_6g092540 | 47.568 | 185 | 75 | 4 | 1 | 173 | 1 | 175 | 1.01e-45 | 157 |
| MS.gene61305.t1 | MTR_8g101650 | 48.889 | 180 | 70 | 6 | 3 | 167 | 4 | 176 | 3.85e-42 | 147 |
| MS.gene61305.t1 | MTR_4g107230 | 54.902 | 153 | 58 | 5 | 15 | 162 | 5 | 151 | 3.03e-36 | 132 |
| MS.gene61305.t1 | MTR_1g111830 | 52.800 | 125 | 43 | 2 | 49 | 173 | 93 | 201 | 2.76e-35 | 128 |
| MS.gene61305.t1 | MTR_3g104370 | 41.622 | 185 | 94 | 4 | 1 | 180 | 3 | 178 | 3.80e-34 | 125 |
| MS.gene61305.t1 | MTR_4g111975 | 58.654 | 104 | 36 | 1 | 89 | 192 | 132 | 228 | 2.16e-33 | 125 |
| MS.gene61305.t1 | MTR_3g462790 | 60.000 | 100 | 38 | 1 | 71 | 168 | 121 | 220 | 3.77e-32 | 122 |
| MS.gene61305.t1 | MTR_5g069710 | 73.239 | 71 | 19 | 0 | 89 | 159 | 126 | 196 | 5.40e-31 | 119 |
| MS.gene61305.t1 | MTR_7g067080 | 66.667 | 81 | 27 | 0 | 87 | 167 | 132 | 212 | 6.15e-31 | 119 |
| MS.gene61305.t1 | MTR_5g081860 | 64.198 | 81 | 27 | 1 | 90 | 168 | 120 | 200 | 9.66e-28 | 109 |
| MS.gene61305.t1 | MTR_0036s0260 | 67.647 | 68 | 22 | 0 | 95 | 162 | 28 | 95 | 1.60e-27 | 107 |
| MS.gene61305.t1 | MTR_2g090305 | 66.176 | 68 | 23 | 0 | 95 | 162 | 28 | 95 | 1.59e-25 | 101 |
| MS.gene61305.t1 | MTR_8g063600 | 60.256 | 78 | 29 | 1 | 84 | 159 | 95 | 172 | 6.19e-25 | 102 |
| MS.gene61305.t1 | MTR_5g027570 | 36.111 | 144 | 86 | 3 | 47 | 184 | 42 | 185 | 7.84e-23 | 95.1 |
| MS.gene61305.t1 | MTR_5g088010 | 40.678 | 118 | 58 | 4 | 47 | 158 | 15 | 126 | 3.15e-20 | 88.6 |
| MS.gene61305.t1 | MTR_4g015130 | 57.812 | 64 | 27 | 0 | 105 | 168 | 3 | 66 | 1.32e-19 | 82.4 |
| MS.gene61305.t1 | MTR_8g063870 | 47.059 | 85 | 37 | 2 | 92 | 168 | 83 | 167 | 2.43e-18 | 84.0 |
| MS.gene61305.t1 | MTR_5g088060 | 41.379 | 116 | 55 | 5 | 47 | 158 | 232 | 338 | 3.56e-18 | 85.1 |
| MS.gene61305.t1 | MTR_5g488160 | 41.379 | 116 | 55 | 5 | 47 | 158 | 232 | 338 | 3.56e-18 | 85.1 |
| MS.gene61305.t1 | MTR_1g048660 | 47.059 | 68 | 36 | 0 | 96 | 163 | 13 | 80 | 3.92e-18 | 78.6 |
| MS.gene61305.t1 | MTR_5g027550 | 47.368 | 76 | 39 | 1 | 68 | 142 | 49 | 124 | 4.32e-18 | 82.0 |
| MS.gene61305.t1 | MTR_1g033620 | 59.322 | 59 | 24 | 0 | 110 | 168 | 20 | 78 | 1.59e-17 | 80.9 |
| MS.gene61305.t1 | MTR_1g083180 | 36.719 | 128 | 65 | 5 | 43 | 157 | 1 | 125 | 3.56e-15 | 73.2 |
| MS.gene61305.t1 | MTR_5g075760 | 39.583 | 96 | 43 | 4 | 76 | 157 | 75 | 169 | 2.99e-12 | 65.5 |
| MS.gene61305.t1 | MTR_3g070110 | 35.088 | 114 | 62 | 3 | 97 | 201 | 97 | 207 | 2.87e-11 | 62.8 |
| MS.gene61305.t1 | MTR_8g072990 | 28.244 | 131 | 89 | 2 | 92 | 220 | 97 | 224 | 6.42e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene61305.t1 | AT5G47390 | 63.277 | 354 | 95 | 10 | 1 | 321 | 1 | 352 | 1.52e-135 | 389 |
| MS.gene61305.t1 | AT3G16350 | 45.288 | 382 | 131 | 15 | 1 | 318 | 1 | 368 | 4.59e-71 | 226 |
| MS.gene61305.t1 | AT5G61620 | 50.267 | 187 | 71 | 5 | 1 | 173 | 8 | 186 | 1.47e-49 | 168 |
| MS.gene61305.t1 | AT1G70000 | 50.244 | 205 | 59 | 7 | 1 | 185 | 1 | 182 | 2.32e-48 | 163 |
| MS.gene61305.t1 | AT1G70000 | 50.244 | 205 | 59 | 7 | 1 | 185 | 1 | 182 | 2.32e-48 | 163 |
| MS.gene61305.t1 | AT5G56840 | 44.751 | 181 | 57 | 6 | 1 | 161 | 1 | 158 | 2.75e-39 | 139 |
| MS.gene61305.t1 | AT2G38090 | 71.795 | 78 | 22 | 0 | 90 | 167 | 136 | 213 | 2.45e-33 | 125 |
| MS.gene61305.t1 | AT1G74840 | 52.667 | 150 | 55 | 5 | 21 | 162 | 22 | 163 | 4.61e-33 | 122 |
| MS.gene61305.t1 | AT1G19000 | 45.128 | 195 | 89 | 4 | 5 | 191 | 4 | 188 | 5.81e-33 | 123 |
| MS.gene61305.t1 | AT1G19000 | 45.128 | 195 | 89 | 4 | 5 | 191 | 4 | 188 | 5.81e-33 | 123 |
| MS.gene61305.t1 | AT1G74840 | 52.667 | 150 | 55 | 5 | 21 | 162 | 22 | 163 | 7.58e-33 | 122 |
| MS.gene61305.t1 | AT5G08520 | 52.336 | 107 | 51 | 0 | 62 | 168 | 85 | 191 | 8.55e-33 | 123 |
| MS.gene61305.t1 | AT1G49010 | 68.293 | 82 | 24 | 1 | 89 | 168 | 128 | 209 | 1.12e-32 | 123 |
| MS.gene61305.t1 | AT5G04760 | 62.195 | 82 | 31 | 0 | 83 | 164 | 87 | 168 | 1.20e-31 | 118 |
| MS.gene61305.t1 | AT5G58900 | 72.857 | 70 | 19 | 0 | 90 | 159 | 136 | 205 | 5.22e-31 | 118 |
| MS.gene61305.t1 | AT3G11280 | 55.000 | 100 | 45 | 0 | 60 | 159 | 92 | 191 | 8.34e-29 | 112 |
| MS.gene61305.t1 | AT3G11280 | 55.000 | 100 | 45 | 0 | 60 | 159 | 92 | 191 | 8.34e-29 | 112 |
| MS.gene61305.t1 | AT5G01200 | 63.636 | 77 | 28 | 0 | 89 | 165 | 140 | 216 | 3.31e-28 | 110 |
| MS.gene61305.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 83 | 159 | 119 | 195 | 1.23e-26 | 106 |
| MS.gene61305.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 83 | 159 | 119 | 195 | 1.23e-26 | 106 |
| MS.gene61305.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 68 | 169 | 68 | 167 | 7.97e-24 | 98.6 |
| MS.gene61305.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 68 | 169 | 68 | 167 | 1.27e-23 | 98.6 |
| MS.gene61305.t1 | AT4G09450 | 48.515 | 101 | 46 | 2 | 75 | 169 | 68 | 168 | 6.03e-22 | 92.0 |
| MS.gene61305.t1 | AT5G23650 | 51.948 | 77 | 37 | 0 | 83 | 159 | 108 | 184 | 1.51e-20 | 90.9 |
| MS.gene61305.t1 | AT3G10590 | 48.276 | 87 | 41 | 3 | 79 | 162 | 92 | 177 | 3.49e-18 | 82.0 |
Find 102 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCATGTGTTTCTTTCTT+AGG | 0.230059 | 8.2:+22381699 | None:intergenic |
| ATCGACATTGATTGGGCTCT+TGG | 0.306199 | 8.2:+22381653 | None:intergenic |
| GATCCGGAAAAGTGCTAGTA+TGG | 0.310152 | 8.2:-22384312 | MS.gene61305:CDS |
| CATTGATGTCGGGCTTTAAT+GGG | 0.332518 | 8.2:+22381820 | None:intergenic |
| GCATTGATGTCGGGCTTTAA+TGG | 0.338606 | 8.2:+22381819 | None:intergenic |
| AACAGCTTCACACCACGATT+TGG | 0.346847 | 8.2:+22384356 | None:intergenic |
| ATTGGGCTCTTGGAATGTAC+TGG | 0.350663 | 8.2:+22381663 | None:intergenic |
| ACGAGTTCATCGACATTGAT+TGG | 0.357821 | 8.2:+22381645 | None:intergenic |
| CACTATAGCGGGTCCGGGTC+TGG | 0.363851 | 8.2:-22384278 | MS.gene61305:CDS |
| GGTGAAACTATTGGTGATAC+TGG | 0.369014 | 8.2:-22381600 | MS.gene61305:CDS |
| TTTCCTCTTCCATATTGGTC+TGG | 0.369873 | 8.2:-22381741 | MS.gene61305:CDS |
| TGTGTTTCTTTCTTAGGAGC+TGG | 0.373891 | 8.2:+22381705 | None:intergenic |
| CCTTGATATAACATAGTTCC+TGG | 0.379937 | 8.2:+22382810 | None:intergenic |
| CTTAGCCACTATAGCGGGTC+CGG | 0.398806 | 8.2:-22384284 | MS.gene61305:CDS |
| GATCATGGTGCTGATGGTTA+TGG | 0.418054 | 8.2:-22384206 | MS.gene61305:CDS |
| TAACCATCAGCACCATGATC+AGG | 0.421312 | 8.2:+22384209 | None:intergenic |
| CTCTTGGAATGTACTGGGGT+TGG | 0.426876 | 8.2:+22381669 | None:intergenic |
| TTCATACAACTCCAGCTTGT+GGG | 0.433206 | 8.2:-22381521 | MS.gene61305:CDS |
| TTGGGCTCTTGGAATGTACT+GGG | 0.435041 | 8.2:+22381664 | None:intergenic |
| GGAAGAGGAAAAGGGAAGAA+TGG | 0.436557 | 8.2:+22381753 | None:intergenic |
| GACCAATATGGAAGAGGAAA+AGG | 0.441108 | 8.2:+22381744 | None:intergenic |
| TGCGGTACCATTGAAGTATC+AGG | 0.442348 | 8.2:+22381975 | None:intergenic |
| CTGAGTTTAGGTGAAACTAT+TGG | 0.449826 | 8.2:-22381609 | MS.gene61305:CDS |
| GCAGGCACCTGATACTTCAA+TGG | 0.455907 | 8.2:-22381982 | MS.gene61305:intron |
| GACGCTTGTGCATTGATGTC+GGG | 0.457053 | 8.2:+22381810 | None:intergenic |
| GGACTGTATCCAGACCAATA+TGG | 0.463662 | 8.2:+22381732 | None:intergenic |
| AATCGTGGTGTGAAGCTGTT+TGG | 0.464828 | 8.2:-22384353 | MS.gene61305:CDS |
| CGAGTTCATCGACATTGATT+GGG | 0.465415 | 8.2:+22381646 | None:intergenic |
| CATCTGCAACAATATCAAAC+AGG | 0.473584 | 8.2:+22382707 | None:intergenic |
| TGCACAAGCGTCGGCTTACC+CGG | 0.477679 | 8.2:-22381799 | MS.gene61305:CDS |
| TGAAAAGCCGACTGTCTAGA+AGG | 0.477844 | 8.2:+22381540 | None:intergenic |
| ACAAGCTGGGCAAAGGTGAT+TGG | 0.481462 | 8.2:-22382843 | MS.gene61305:CDS |
| GTTCTCATTGCAGCCACAAT+GGG | 0.482827 | 8.2:-22384397 | MS.gene61305:CDS |
| TCATCGAGTGGAGGAGGAGC+AGG | 0.484781 | 8.2:+22381897 | None:intergenic |
| CTATGTTCCTCCTCAGTCCA+TGG | 0.485937 | 8.2:+22382886 | None:intergenic |
| GGCATGTCAAAACTGAGTTT+AGG | 0.490022 | 8.2:-22381621 | MS.gene61305:CDS |
| TAAGATTAACCGATGGGATC+CGG | 0.490318 | 8.2:-22384328 | MS.gene61305:CDS |
| TCTTTCTTAGGAGCTGGCTC+AGG | 0.491218 | 8.2:+22381711 | None:intergenic |
| AAGAATGGAGAATAATATGC+TGG | 0.499540 | 8.2:+22381768 | None:intergenic |
| GTTTGAGTTTGTAGAATCCA+TGG | 0.503591 | 8.2:+22381863 | None:intergenic |
| CGACGCTTGTGCATTGATGT+CGG | 0.504753 | 8.2:+22381809 | None:intergenic |
| GTGATTGGCGTGGAATTGCC+AGG | 0.506530 | 8.2:-22382828 | MS.gene61305:CDS |
| CAGACCCGGACCCGCTATAG+TGG | 0.508114 | 8.2:+22384279 | None:intergenic |
| CACAGAACAGTCCCACAAGC+TGG | 0.510753 | 8.2:+22381510 | None:intergenic |
| TTACTTGGATTGAACAAGCT+GGG | 0.512315 | 8.2:-22382856 | MS.gene61305:CDS |
| CATTCTTCATCGAGTGGAGG+AGG | 0.516097 | 8.2:+22381891 | None:intergenic |
| ACCAATATGGAAGAGGAAAA+GGG | 0.517539 | 8.2:+22381745 | None:intergenic |
| CCAGGAACTATGTTATATCA+AGG | 0.521846 | 8.2:-22382810 | MS.gene61305:CDS |
| AGTGGAGGAGGAGCAGGCAA+AGG | 0.525729 | 8.2:+22381903 | None:intergenic |
| TTTACTTGGATTGAACAAGC+TGG | 0.526943 | 8.2:-22382857 | MS.gene61305:CDS |
| TCAAATACTCCTGGTTCACC+TGG | 0.529002 | 8.2:-22384239 | MS.gene61305:CDS |
| TAAGAAAGAAACACATGAAG+TGG | 0.531198 | 8.2:-22381697 | MS.gene61305:CDS |
| TAATATGCTGGATATACTAC+CGG | 0.533057 | 8.2:+22381780 | None:intergenic |
| CGATGAAGAATGTGAGTCCA+TGG | 0.537872 | 8.2:-22381880 | MS.gene61305:CDS |
| GTGGAGGAGGAGCAGGCAAA+GGG | 0.545011 | 8.2:+22381904 | None:intergenic |
| AACCCTGATCATGGTGCTGA+TGG | 0.553194 | 8.2:-22384212 | MS.gene61305:CDS |
| GTCGGGCTTTAATGGGGCAG+AGG | 0.557337 | 8.2:+22381827 | None:intergenic |
| TGCAACAATATCAAACAGGC+TGG | 0.557484 | 8.2:+22382711 | None:intergenic |
| TGTTCTCATTGCAGCCACAA+TGG | 0.558526 | 8.2:-22384398 | MS.gene61305:CDS |
| GGTAATCTTAGCCACTATAG+CGG | 0.560908 | 8.2:-22384290 | MS.gene61305:CDS |
| TCTCGTAAACTACTTGAAGA+AGG | 0.563354 | 8.2:-22381564 | MS.gene61305:CDS |
| GATTCTACAAACTCAAACGA+TGG | 0.564664 | 8.2:-22381858 | MS.gene61305:CDS |
| TATCCAGACCAATATGGAAG+AGG | 0.565662 | 8.2:+22381738 | None:intergenic |
| TTAGCCACTATAGCGGGTCC+GGG | 0.567360 | 8.2:-22384283 | MS.gene61305:CDS |
| TTTCATACAACTCCAGCTTG+TGG | 0.570031 | 8.2:-22381522 | MS.gene61305:CDS |
| AGTTTACGAGACAGAGTCGA+GGG | 0.572728 | 8.2:+22381576 | None:intergenic |
| TCAGGCAAAGCAATGTGTCT+AGG | 0.575738 | 8.2:-22382747 | MS.gene61305:CDS |
| AATACCGGGTCAAATACTCC+TGG | 0.575888 | 8.2:-22384248 | MS.gene61305:CDS |
| TTGGAGTAAGATTAACCGAT+GGG | 0.581339 | 8.2:-22384334 | MS.gene61305:CDS |
| TGCTGATGGTTATGGTTCTG+AGG | 0.588306 | 8.2:-22384198 | MS.gene61305:CDS |
| GGATTGAACAAGCTGGGCAA+AGG | 0.588333 | 8.2:-22382850 | MS.gene61305:CDS |
| AACCATCAGCACCATGATCA+GGG | 0.589650 | 8.2:+22384210 | None:intergenic |
| CCTGGTGAAAACCCTGATCA+TGG | 0.590290 | 8.2:-22384221 | MS.gene61305:CDS |
| GTAATCTTAGCCACTATAGC+GGG | 0.591144 | 8.2:-22384289 | MS.gene61305:CDS |
| CGGGAAGTAGAAGAAGAACC+AGG | 0.591204 | 8.2:+22384167 | None:intergenic |
| ATCAATGTCGATGAACTCGT+TGG | 0.598709 | 8.2:-22381642 | MS.gene61305:CDS |
| GACTCACATTCTTCATCGAG+TGG | 0.599669 | 8.2:+22381885 | None:intergenic |
| AGAAGGTCCTTCTAGACAGT+CGG | 0.599702 | 8.2:-22381547 | MS.gene61305:CDS |
| CAACTACAAACTGAAACAGA+AGG | 0.603118 | 8.2:-22381933 | MS.gene61305:CDS |
| ATTGATGTCGGGCTTTAATG+GGG | 0.617600 | 8.2:+22381821 | None:intergenic |
| ATCCGGAAAAGTGCTAGTAT+GGG | 0.617740 | 8.2:-22384311 | MS.gene61305:CDS |
| TTCTTGAGTTGTGCCCATTG+TGG | 0.619382 | 8.2:+22384384 | None:intergenic |
| ATCAAGGACACCTACTCAAG+TGG | 0.620432 | 8.2:-22382794 | MS.gene61305:CDS |
| GCTGCAATGAGAACAACGAC+GGG | 0.624049 | 8.2:+22384406 | None:intergenic |
| CGACATCAATGCACAAGCGT+CGG | 0.624911 | 8.2:-22381808 | MS.gene61305:CDS |
| CTGGGCAAAGGTGATTGGCG+TGG | 0.626265 | 8.2:-22382838 | MS.gene61305:CDS |
| TTTGGAGTAAGATTAACCGA+TGG | 0.628079 | 8.2:-22384335 | MS.gene61305:CDS |
| ATGTGTCTAGGCGGAAGAGA+CGG | 0.634804 | 8.2:-22382735 | MS.gene61305:CDS |
| AATATGCTGGATATACTACC+GGG | 0.636844 | 8.2:+22381781 | None:intergenic |
| TGGGCTCTTGGAATGTACTG+GGG | 0.642523 | 8.2:+22381665 | None:intergenic |
| GCGTGACTGGCCACTTGAGT+AGG | 0.645270 | 8.2:+22382784 | None:intergenic |
| GGCTGCAATGAGAACAACGA+CGG | 0.647502 | 8.2:+22384405 | None:intergenic |
| TTAGCTGACAAGAAGTCTTG+CGG | 0.653600 | 8.2:+22381957 | None:intergenic |
| TGCAGGCACTCCATGGACTG+AGG | 0.655185 | 8.2:-22382896 | MS.gene61305:intron |
| GGTATTCAAAAGTCCAGACC+CGG | 0.655952 | 8.2:+22384265 | None:intergenic |
| TCAAGAACTTGTCCAAATCG+TGG | 0.664250 | 8.2:-22384368 | MS.gene61305:CDS |
| TAGTTTACGAGACAGAGTCG+AGG | 0.668337 | 8.2:+22381575 | None:intergenic |
| TCACATTCTTCATCGAGTGG+AGG | 0.671641 | 8.2:+22381888 | None:intergenic |
| AGGCACTCCATGGACTGAGG+AGG | 0.685831 | 8.2:-22382893 | MS.gene61305:CDS |
| GGCAAAGCAATGTGTCTAGG+CGG | 0.687559 | 8.2:-22382744 | MS.gene61305:CDS |
| TGAACCAGGAGTATTTGACC+CGG | 0.708436 | 8.2:+22384244 | None:intergenic |
| GTTTACGAGACAGAGTCGAG+GGG | 0.738520 | 8.2:+22381577 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATATTTTATTTGC+AGG | - | chr8.2:22383006-22383025 | MS.gene61305:intron | 10.0% |
| !!! | GAAAAAGTATTAAAAAAAAA+CGG | + | chr8.2:22383686-22383705 | None:intergenic | 10.0% |
| !! | ATTATTATGTTTGTTTAACT+TGG | - | chr8.2:22382161-22382180 | MS.gene61305:intron | 15.0% |
| !! | TAAAAAAAAAAACACACATT+TGG | + | chr8.2:22383354-22383373 | None:intergenic | 15.0% |
| !!! | AAATATCATTTAAAGCAAAA+AGG | + | chr8.2:22382767-22382786 | None:intergenic | 15.0% |
| !!! | TTATATTTTTGATTTTTGGT+TGG | - | chr8.2:22381954-22381973 | MS.gene61305:CDS | 15.0% |
| !! | ATATAGAATTTGGAAATAAG+GGG | + | chr8.2:22383246-22383265 | None:intergenic | 20.0% |
| !! | ATCTATGATAGATTAAATAC+CGG | - | chr8.2:22382314-22382333 | MS.gene61305:intron | 20.0% |
| !! | ATTTGGATAATCTTATCAAA+TGG | + | chr8.2:22383337-22383356 | None:intergenic | 20.0% |
| !! | CATATAGAATTTGGAAATAA+GGG | + | chr8.2:22383247-22383266 | None:intergenic | 20.0% |
| !! | TAAAACATTGGTATTTAGTT+TGG | - | chr8.2:22383788-22383807 | MS.gene61305:intron | 20.0% |
| !! | TTATATGCAACATAATGTAA+AGG | + | chr8.2:22383284-22383303 | None:intergenic | 20.0% |
| !! | TTTGAATTCAATTATATAGC+TGG | - | chr8.2:22383625-22383644 | MS.gene61305:intron | 20.0% |
| !!! | AATATGCTCTTTTAACTATA+TGG | - | chr8.2:22382405-22382424 | MS.gene61305:intron | 20.0% |
| !!! | AATGTTAGGTATACTTTTTT+GGG | - | chr8.2:22382843-22382862 | MS.gene61305:CDS | 20.0% |
| !!! | ATCTGAAATATATTGAATGT+TGG | - | chr8.2:22382069-22382088 | MS.gene61305:intron | 20.0% |
| !!! | CATTTTAAGCATATAGAATT+TGG | + | chr8.2:22383256-22383275 | None:intergenic | 20.0% |
| !!! | TAATGTTAGGTATACTTTTT+TGG | - | chr8.2:22382842-22382861 | MS.gene61305:CDS | 20.0% |
| !!! | TATTTTTGTTTTGATTTTGC+AGG | - | chr8.2:22383919-22383938 | MS.gene61305:intron | 20.0% |
| !!! | TTTGCTTTAAATGATATTTG+TGG | - | chr8.2:22382768-22382787 | MS.gene61305:CDS | 20.0% |
| ! | AACATTATTAATACACAGAG+AGG | + | chr8.2:22383496-22383515 | None:intergenic | 25.0% |
| ! | ATCAAATTAGTGAGAAATAC+GGG | + | chr8.2:22383753-22383772 | None:intergenic | 25.0% |
| ! | ATTTCTCACTAATTTGATGT+CGG | - | chr8.2:22383755-22383774 | MS.gene61305:intron | 25.0% |
| ! | CATCAAATTAGTGAGAAATA+CGG | + | chr8.2:22383754-22383773 | None:intergenic | 25.0% |
| ! | CTAGATGAATTCAAGTATAT+TGG | - | chr8.2:22381873-22381892 | MS.gene61305:CDS | 25.0% |
| ! | GCATATAGAATTTGGAAATA+AGG | + | chr8.2:22383248-22383267 | None:intergenic | 25.0% |
| ! | GTGAACTATATGCATATTAA+TGG | + | chr8.2:22382228-22382247 | None:intergenic | 25.0% |
| ! | GTTAGATATTGATAGAAACA+TGG | - | chr8.2:22383519-22383538 | MS.gene61305:intron | 25.0% |
| ! | TAAATTATGTGATCTTGGTT+TGG | - | chr8.2:22381897-22381916 | MS.gene61305:CDS | 25.0% |
| ! | TCTATGATAGATTAAATACC+GGG | - | chr8.2:22382315-22382334 | MS.gene61305:intron | 25.0% |
| ! | TCTGTGTATTAATAATGTTC+TGG | - | chr8.2:22383497-22383516 | MS.gene61305:intron | 25.0% |
| ! | TTCAAATAGTCACTAATGTT+AGG | - | chr8.2:22382829-22382848 | MS.gene61305:CDS | 25.0% |
| ! | TTGGATAAATTATGTGATCT+TGG | - | chr8.2:22381892-22381911 | MS.gene61305:CDS | 25.0% |
| !! | ATGATATTGTTTGACCTTTT+AGG | - | chr8.2:22383374-22383393 | MS.gene61305:intron | 25.0% |
| !! | ATTTTCAAAGAATCCCTAAA+AGG | + | chr8.2:22383391-22383410 | None:intergenic | 25.0% |
| !! | TGATATTGTTTGACCTTTTA+GGG | - | chr8.2:22383375-22383394 | MS.gene61305:intron | 25.0% |
| !! | TGCACAAAGTATTAGATTTA+GGG | + | chr8.2:22382685-22382704 | None:intergenic | 25.0% |
| !! | TTAAATGAGTCAAAGGTTTT+AGG | + | chr8.2:22382871-22382890 | None:intergenic | 25.0% |
| !! | TTCTGAACCTTCTAATTTTT+CGG | - | chr8.2:22383887-22383906 | MS.gene61305:intron | 25.0% |
| !! | TTGCACAAAGTATTAGATTT+AGG | + | chr8.2:22382686-22382705 | None:intergenic | 25.0% |
| !!! | ATGTTAGGTATACTTTTTTG+GGG | - | chr8.2:22382844-22382863 | MS.gene61305:CDS | 25.0% |
| !!! | GAACATAGAATGTTTTTACT+TGG | - | chr8.2:22383048-22383067 | MS.gene61305:intron | 25.0% |
| !!! | GTCTTTTTTGAGAGAATTAT+TGG | - | chr8.2:22382038-22382057 | MS.gene61305:intron | 25.0% |
| AACCTAGTTAAATGAGTCAA+AGG | + | chr8.2:22382878-22382897 | None:intergenic | 30.0% | |
| AACCTTTGACTCATTTAACT+AGG | - | chr8.2:22382873-22382892 | MS.gene61305:CDS | 30.0% | |
| AAGAATGGAGAATAATATGC+TGG | + | chr8.2:22384154-22384173 | None:intergenic | 30.0% | |
| AATTCAATTATATAGCTGGC+TGG | - | chr8.2:22383629-22383648 | MS.gene61305:intron | 30.0% | |
| AATTGAATTCAAACCAACCA+GGG | + | chr8.2:22383618-22383637 | None:intergenic | 30.0% | |
| ACGCTCAAAAATATTTCATC+AGG | - | chr8.2:22383154-22383173 | MS.gene61305:intron | 30.0% | |
| ACTTCATGTGTTTCTTTCTT+AGG | + | chr8.2:22384223-22384242 | None:intergenic | 30.0% | |
| AGAAATCCCGAAAAATTAGA+AGG | + | chr8.2:22383897-22383916 | None:intergenic | 30.0% | |
| ATCATGACTGAAACAATCTT+TGG | - | chr8.2:22382484-22382503 | MS.gene61305:intron | 30.0% | |
| GAAAAATTAGAAGGTTCAGA+AGG | + | chr8.2:22383888-22383907 | None:intergenic | 30.0% | |
| GTATTCTAGTGCCTAATTAT+GGG | - | chr8.2:22382193-22382212 | MS.gene61305:intron | 30.0% | |
| TAAGAAAGAAACACATGAAG+TGG | - | chr8.2:22384222-22384241 | MS.gene61305:CDS | 30.0% | |
| TAATATGCTGGATATACTAC+CGG | + | chr8.2:22384142-22384161 | None:intergenic | 30.0% | |
| TAATTGAATTCAAACCAACC+AGG | + | chr8.2:22383619-22383638 | None:intergenic | 30.0% | |
| TATTCTAGTGCCTAATTATG+GGG | - | chr8.2:22382194-22382213 | MS.gene61305:intron | 30.0% | |
| TGACTCATTTAACTAGGTTT+CGG | - | chr8.2:22382879-22382898 | MS.gene61305:CDS | 30.0% | |
| TGTATTCTAGTGCCTAATTA+TGG | - | chr8.2:22382192-22382211 | MS.gene61305:intron | 30.0% | |
| TTTCTCACTAATTTGATGTC+GGG | - | chr8.2:22383756-22383775 | MS.gene61305:intron | 30.0% | |
| TTTGCTTGCATGTGAATTAT+TGG | - | chr8.2:22381823-22381842 | MS.gene61305:CDS | 30.0% | |
| ! | AAACATTGCATTTTCTGATG+TGG | - | chr8.2:22383816-22383835 | MS.gene61305:intron | 30.0% |
| ! | AAATGGACAATTTTCCCAAA+TGG | + | chr8.2:22383449-22383468 | None:intergenic | 30.0% |
| ! | CTTATCAAATGGTAATGAAC+AGG | + | chr8.2:22383326-22383345 | None:intergenic | 30.0% |
| ! | GCACAAAGTATTAGATTTAG+GGG | + | chr8.2:22382684-22382703 | None:intergenic | 30.0% |
| ! | GTCTATCTAAAGTTTGATCT+AGG | + | chr8.2:22382745-22382764 | None:intergenic | 30.0% |
| ! | TCTGAACCTTCTAATTTTTC+GGG | - | chr8.2:22383888-22383907 | MS.gene61305:intron | 30.0% |
| ! | TTGAATGTTGGTCTAAGAAA+TGG | - | chr8.2:22382081-22382100 | MS.gene61305:intron | 30.0% |
| !! | AACATTGGTATTTAGTTTGG+AGG | - | chr8.2:22383791-22383810 | MS.gene61305:intron | 30.0% |
| !! | GCTCTTTTAACTATATGGTT+CGG | - | chr8.2:22382410-22382429 | MS.gene61305:intron | 30.0% |
| !!! | AACATTGTTTTTGAACCACA+TGG | + | chr8.2:22382125-22382144 | None:intergenic | 30.0% |
| !!! | ACAAACCCTTTTTTCTTTCA+CGG | + | chr8.2:22381775-22381794 | None:intergenic | 30.0% |
| !!! | GGGACTGATTTTTAAAACAT+TGG | - | chr8.2:22383776-22383795 | MS.gene61305:intron | 30.0% |
| !!! | TGTTAGGTATACTTTTTTGG+GGG | - | chr8.2:22382845-22382864 | MS.gene61305:CDS | 30.0% |
| !!! | TTTGGCAATGTTTTAATAGC+CGG | - | chr8.2:22383552-22383571 | MS.gene61305:intron | 30.0% |
| !!! | TTTTTGGTTGGTGTAATTGT+AGG | - | chr8.2:22381966-22381985 | MS.gene61305:CDS | 30.0% |
| AAGAAATGTGACCCTATTCA+GGG | + | chr8.2:22382633-22382652 | None:intergenic | 35.0% | |
| AATATGCTGGATATACTACC+GGG | + | chr8.2:22384141-22384160 | None:intergenic | 35.0% | |
| AATGGATAGGTATAAGTCTC+AGG | - | chr8.2:22382099-22382118 | MS.gene61305:intron | 35.0% | |
| AATTCACATGCAAGCAAAAG+AGG | + | chr8.2:22381821-22381840 | None:intergenic | 35.0% | |
| ACATTACAGTCAGCTTCAAT+GGG | - | chr8.2:22382943-22382962 | MS.gene61305:intron | 35.0% | |
| ACATTTCTTAAACGACGACA+TGG | - | chr8.2:22382644-22382663 | MS.gene61305:intron | 35.0% | |
| ACCAATATGGAAGAGGAAAA+GGG | + | chr8.2:22384177-22384196 | None:intergenic | 35.0% | |
| ACCTGGACAAAAATAAAGCT+TGG | + | chr8.2:22382510-22382529 | None:intergenic | 35.0% | |
| ACTTCCCGTGAAAGAAAAAA+GGG | - | chr8.2:22381767-22381786 | MS.gene61305:CDS | 35.0% | |
| ATTACACACAACCCTGAATA+GGG | - | chr8.2:22382619-22382638 | MS.gene61305:intron | 35.0% | |
| ATTCTAGTGCCTAATTATGG+GGG | - | chr8.2:22382195-22382214 | MS.gene61305:intron | 35.0% | |
| ATTGATAGAAACATGGCTCT+GGG | - | chr8.2:22383526-22383545 | MS.gene61305:intron | 35.0% | |
| CAAATTCAGCTAAACAGTAC+TGG | + | chr8.2:22382906-22382925 | None:intergenic | 35.0% | |
| CAACTACAAACTGAAACAGA+AGG | - | chr8.2:22383986-22384005 | MS.gene61305:intron | 35.0% | |
| CATCAACATCCAAAATATCC+AGG | + | chr8.2:22383472-22383491 | None:intergenic | 35.0% | |
| CATCCAAAATATCCAGGAAA+TGG | + | chr8.2:22383466-22383485 | None:intergenic | 35.0% | |
| CATCTGCAACAATATCAAAC+AGG | + | chr8.2:22383215-22383234 | None:intergenic | 35.0% | |
| CCAGGAACTATGTTATATCA+AGG | - | chr8.2:22383109-22383128 | MS.gene61305:intron | 35.0% | |
| CCTTGATATAACATAGTTCC+TGG | + | chr8.2:22383112-22383131 | None:intergenic | 35.0% | |
| CTGAGTTTAGGTGAAACTAT+TGG | - | chr8.2:22384310-22384329 | MS.gene61305:CDS | 35.0% | |
| CTGTTTCAGCTATCTAAACT+AGG | - | chr8.2:22382247-22382266 | MS.gene61305:intron | 35.0% | |
| GATTCTACAAACTCAAACGA+TGG | - | chr8.2:22384061-22384080 | MS.gene61305:intron | 35.0% | |
| GGTTCAAGACACAGAAAAAA+TGG | - | chr8.2:22382563-22382582 | MS.gene61305:intron | 35.0% | |
| TAAGAAATGTGACCCTATTC+AGG | + | chr8.2:22382634-22382653 | None:intergenic | 35.0% | |
| TACTTCCCGTGAAAGAAAAA+AGG | - | chr8.2:22381766-22381785 | MS.gene61305:CDS | 35.0% | |
| TAGGAGTAACTAGACAAGAA+AGG | - | chr8.2:22381985-22382004 | MS.gene61305:intron | 35.0% | |
| TATTGATAGAAACATGGCTC+TGG | - | chr8.2:22383525-22383544 | MS.gene61305:intron | 35.0% | |
| TCTCGTAAACTACTTGAAGA+AGG | - | chr8.2:22384355-22384374 | MS.gene61305:CDS | 35.0% | |
| TTACTTGGATTGAACAAGCT+GGG | - | chr8.2:22383063-22383082 | MS.gene61305:intron | 35.0% | |
| TTAGAAGGTTCAGAAGGAAA+AGG | + | chr8.2:22383882-22383901 | None:intergenic | 35.0% | |
| TTGGAGTAAGATTAACCGAT+GGG | - | chr8.2:22381585-22381604 | MS.gene61305:CDS | 35.0% | |
| TTTACTTGGATTGAACAAGC+TGG | - | chr8.2:22383062-22383081 | MS.gene61305:intron | 35.0% | |
| ! | ATGGTAATGAACAGGTTATG+TGG | + | chr8.2:22383318-22383337 | None:intergenic | 35.0% |
| ! | CAAAGTATTAGATTTAGGGG+AGG | + | chr8.2:22382681-22382700 | None:intergenic | 35.0% |
| ! | GTTTGAGTTTGTAGAATCCA+TGG | + | chr8.2:22384059-22384078 | None:intergenic | 35.0% |
| ! | TGTCCATTTCCTGGATATTT+TGG | - | chr8.2:22383460-22383479 | MS.gene61305:intron | 35.0% |
| ! | TGTTGGTCTAAGAAATGGAT+AGG | - | chr8.2:22382086-22382105 | MS.gene61305:intron | 35.0% |
| ! | TTTGGAGTAAGATTAACCGA+TGG | - | chr8.2:22381584-22381603 | MS.gene61305:CDS | 35.0% |
| ! | TTTTCTGTGTCTTGAACCTT+CGG | + | chr8.2:22382561-22382580 | None:intergenic | 35.0% |
| !! | GAAATATTTTTGAGCGTGAC+TGG | + | chr8.2:22383151-22383170 | None:intergenic | 35.0% |
| !! | TATGTGATCTTGGTTTGGAT+TGG | - | chr8.2:22381902-22381921 | MS.gene61305:CDS | 35.0% |
| !!! | CAAACCCTTTTTTCTTTCAC+GGG | + | chr8.2:22381774-22381793 | None:intergenic | 35.0% |
| ACGAGTTCATCGACATTGAT+TGG | + | chr8.2:22384277-22384296 | None:intergenic | 40.0% | |
| ATAGATTAAATACCGGGCTG+TGG | - | chr8.2:22382321-22382340 | MS.gene61305:intron | 40.0% | |
| ATCAATGTCGATGAACTCGT+TGG | - | chr8.2:22384277-22384296 | MS.gene61305:CDS | 40.0% | |
| CAATGCTTGCAGATCATTAG+GGG | + | chr8.2:22382381-22382400 | None:intergenic | 40.0% | |
| CACATTACAGTCAGCTTCAA+TGG | - | chr8.2:22382942-22382961 | MS.gene61305:intron | 40.0% | |
| CATTACAGTCAGCTTCAATG+GGG | - | chr8.2:22382944-22382963 | MS.gene61305:intron | 40.0% | |
| CCAATGCTTGCAGATCATTA+GGG | + | chr8.2:22382382-22382401 | None:intergenic | 40.0% | |
| GACCAATATGGAAGAGGAAA+AGG | + | chr8.2:22384178-22384197 | None:intergenic | 40.0% | |
| GATTACACACAACCCTGAAT+AGG | - | chr8.2:22382618-22382637 | MS.gene61305:intron | 40.0% | |
| GGCATGTCAAAACTGAGTTT+AGG | - | chr8.2:22384298-22384317 | MS.gene61305:CDS | 40.0% | |
| GGTAATCTTAGCCACTATAG+CGG | - | chr8.2:22381629-22381648 | MS.gene61305:CDS | 40.0% | |
| GTAATCTTAGCCACTATAGC+GGG | - | chr8.2:22381630-22381649 | MS.gene61305:CDS | 40.0% | |
| TAAGATTAACCGATGGGATC+CGG | - | chr8.2:22381591-22381610 | MS.gene61305:CDS | 40.0% | |
| TATCCAGACCAATATGGAAG+AGG | + | chr8.2:22384184-22384203 | None:intergenic | 40.0% | |
| TCAAGAACTTGTCCAAATCG+TGG | - | chr8.2:22381551-22381570 | MS.gene61305:CDS | 40.0% | |
| TGCAACAATATCAAACAGGC+TGG | + | chr8.2:22383211-22383230 | None:intergenic | 40.0% | |
| TGGGAAAATTGTCCATTTCC+TGG | - | chr8.2:22383451-22383470 | MS.gene61305:intron | 40.0% | |
| TGTGTTTCTTTCTTAGGAGC+TGG | + | chr8.2:22384217-22384236 | None:intergenic | 40.0% | |
| TTAGCTGACAAGAAGTCTTG+CGG | + | chr8.2:22383965-22383984 | None:intergenic | 40.0% | |
| TTAGTGAGAAATACGGGTCA+TGG | + | chr8.2:22383747-22383766 | None:intergenic | 40.0% | |
| TTCAGTCATGATTCGAACTC+TGG | + | chr8.2:22382476-22382495 | None:intergenic | 40.0% | |
| TTCATACAACTCCAGCTTGT+GGG | - | chr8.2:22384398-22384417 | MS.gene61305:CDS | 40.0% | |
| TTTCATACAACTCCAGCTTG+TGG | - | chr8.2:22384397-22384416 | MS.gene61305:CDS | 40.0% | |
| TTTCCTCTTCCATATTGGTC+TGG | - | chr8.2:22384178-22384197 | MS.gene61305:CDS | 40.0% | |
| TTTCTGTGTCTTGAACCTTC+GGG | + | chr8.2:22382560-22382579 | None:intergenic | 40.0% | |
| ! | ATTGATGTCGGGCTTTAATG+GGG | + | chr8.2:22384101-22384120 | None:intergenic | 40.0% |
| ! | CACGACACTGTTTTCCATTT+GGG | - | chr8.2:22383432-22383451 | MS.gene61305:intron | 40.0% |
| ! | CATTGATGTCGGGCTTTAAT+GGG | + | chr8.2:22384102-22384121 | None:intergenic | 40.0% |
| ! | CGAGTTCATCGACATTGATT+GGG | + | chr8.2:22384276-22384295 | None:intergenic | 40.0% |
| ! | GGTGAAACTATTGGTGATAC+TGG | - | chr8.2:22384319-22384338 | MS.gene61305:CDS | 40.0% |
| ! | TACCCATACTAGCACTTTTC+CGG | + | chr8.2:22381613-22381632 | None:intergenic | 40.0% |
| ! | TCACGACACTGTTTTCCATT+TGG | - | chr8.2:22383431-22383450 | MS.gene61305:intron | 40.0% |
| ! | TCCCTTTTCCTCTTCCATAT+TGG | - | chr8.2:22384173-22384192 | MS.gene61305:CDS | 40.0% |
| ! | TTGATAGAAACATGGCTCTG+GGG | - | chr8.2:22383527-22383546 | MS.gene61305:intron | 40.0% |
| !! | ATCCGGAAAAGTGCTAGTAT+GGG | - | chr8.2:22381608-22381627 | MS.gene61305:CDS | 40.0% |
| !! | TTTTATTTGCAGGCACTCCA+TGG | - | chr8.2:22383016-22383035 | MS.gene61305:intron | 40.0% |
| !!! | GCCAAGCTTTATTTTTGTCC+AGG | - | chr8.2:22382506-22382525 | MS.gene61305:intron | 40.0% |
| AAAAACGGTTGAACCAGCCA+TGG | + | chr8.2:22383671-22383690 | None:intergenic | 45.0% | |
| AAACCAACCAGGGAACTAGT+TGG | + | chr8.2:22383608-22383627 | None:intergenic | 45.0% | |
| AACAGCTTCACACCACGATT+TGG | + | chr8.2:22381566-22381585 | None:intergenic | 45.0% | |
| AACCATCAGCACCATGATCA+GGG | + | chr8.2:22381712-22381731 | None:intergenic | 45.0% | |
| AATACCGGGTCAAATACTCC+TGG | - | chr8.2:22381671-22381690 | MS.gene61305:CDS | 45.0% | |
| AATCGTGGTGTGAAGCTGTT+TGG | - | chr8.2:22381566-22381585 | MS.gene61305:CDS | 45.0% | |
| AGAAGGTCCTTCTAGACAGT+CGG | - | chr8.2:22384372-22384391 | MS.gene61305:CDS | 45.0% | |
| AGTTTACGAGACAGAGTCGA+GGG | + | chr8.2:22384346-22384365 | None:intergenic | 45.0% | |
| ATCAAGGACACCTACTCAAG+TGG | - | chr8.2:22383125-22383144 | MS.gene61305:intron | 45.0% | |
| ATCCTTCCCAAGAGTGAGTA+GGG | - | chr8.2:22382719-22382738 | MS.gene61305:CDS | 45.0% | |
| ATTGGGCTCTTGGAATGTAC+TGG | + | chr8.2:22384259-22384278 | None:intergenic | 45.0% | |
| CAGAAGGAAAAGGAAAAGCG+AGG | + | chr8.2:22383872-22383891 | None:intergenic | 45.0% | |
| CCCTAATGATCTGCAAGCAT+TGG | - | chr8.2:22382379-22382398 | MS.gene61305:intron | 45.0% | |
| CGATGAAGAATGTGAGTCCA+TGG | - | chr8.2:22384039-22384058 | MS.gene61305:intron | 45.0% | |
| GACTCACATTCTTCATCGAG+TGG | + | chr8.2:22384037-22384056 | None:intergenic | 45.0% | |
| GCCAATGCTTGCAGATCATT+AGG | + | chr8.2:22382383-22382402 | None:intergenic | 45.0% | |
| GGAAGAGGAAAAGGGAAGAA+TGG | + | chr8.2:22384169-22384188 | None:intergenic | 45.0% | |
| GGACTGTATCCAGACCAATA+TGG | + | chr8.2:22384190-22384209 | None:intergenic | 45.0% | |
| GGTATTCAAAAGTCCAGACC+CGG | + | chr8.2:22381657-22381676 | None:intergenic | 45.0% | |
| GTCAGCTTCAATGGGGATTA+CGG | - | chr8.2:22382951-22382970 | MS.gene61305:intron | 45.0% | |
| GTTCTCATTGCAGCCACAAT+GGG | - | chr8.2:22381522-22381541 | MS.gene61305:CDS | 45.0% | |
| TAACCATCAGCACCATGATC+AGG | + | chr8.2:22381713-22381732 | None:intergenic | 45.0% | |
| TACTCACTCTTGGGAAGGAT+GGG | + | chr8.2:22382719-22382738 | None:intergenic | 45.0% | |
| TAGTTTACGAGACAGAGTCG+AGG | + | chr8.2:22384347-22384366 | None:intergenic | 45.0% | |
| TCAAATACTCCTGGTTCACC+TGG | - | chr8.2:22381680-22381699 | MS.gene61305:CDS | 45.0% | |
| TCACATTCTTCATCGAGTGG+AGG | + | chr8.2:22384034-22384053 | None:intergenic | 45.0% | |
| TCAGGCAAAGCAATGTGTCT+AGG | - | chr8.2:22383172-22383191 | MS.gene61305:intron | 45.0% | |
| TGAAAAGCCGACTGTCTAGA+AGG | + | chr8.2:22384382-22384401 | None:intergenic | 45.0% | |
| TGTCTTGAACCTTCGGGAAA+GGG | + | chr8.2:22382554-22382573 | None:intergenic | 45.0% | |
| TGTTCTCATTGCAGCCACAA+TGG | - | chr8.2:22381521-22381540 | MS.gene61305:CDS | 45.0% | |
| TTGGGCTCTTGGAATGTACT+GGG | + | chr8.2:22384258-22384277 | None:intergenic | 45.0% | |
| ! | ACTATATGGTTCGGCTCAAG+TGG | - | chr8.2:22382419-22382438 | MS.gene61305:intron | 45.0% |
| ! | ATCGACATTGATTGGGCTCT+TGG | + | chr8.2:22384269-22384288 | None:intergenic | 45.0% |
| ! | GCATTGATGTCGGGCTTTAA+TGG | + | chr8.2:22384103-22384122 | None:intergenic | 45.0% |
| ! | GGGTCTGGACTTTTGAATAC+CGG | - | chr8.2:22381656-22381675 | MS.gene61305:CDS | 45.0% |
| ! | GGTCTGGACTTTTGAATACC+GGG | - | chr8.2:22381657-22381676 | MS.gene61305:CDS | 45.0% |
| ! | TGCGGTACCATTGAAGTATC+AGG | + | chr8.2:22383947-22383966 | None:intergenic | 45.0% |
| ! | TGCTGATGGTTATGGTTCTG+AGG | - | chr8.2:22381721-22381740 | MS.gene61305:CDS | 45.0% |
| ! | TTCTTGAGTTGTGCCCATTG+TGG | + | chr8.2:22381538-22381557 | None:intergenic | 45.0% |
| ! | TTTTTGTCCAGGTCGAACTC+TGG | - | chr8.2:22382517-22382536 | MS.gene61305:intron | 45.0% |
| !! | AAACATGGCTCTGGGGTATT+TGG | - | chr8.2:22383534-22383553 | MS.gene61305:intron | 45.0% |
| !! | GATCATGGTGCTGATGGTTA+TGG | - | chr8.2:22381713-22381732 | MS.gene61305:CDS | 45.0% |
| !! | GATCCGGAAAAGTGCTAGTA+TGG | - | chr8.2:22381607-22381626 | MS.gene61305:CDS | 45.0% |
| !! | TGAACCAGGAGTATTTGACC+CGG | + | chr8.2:22381678-22381697 | None:intergenic | 45.0% |
| !!! | GGTTCTGAGGATTTTGTTCC+TGG | - | chr8.2:22381734-22381753 | MS.gene61305:CDS | 45.0% |
| !!! | AATATTATATTTTTGATTTT+TGG | - | chr8.2:22381950-22381969 | MS.gene61305:CDS | 5.0% |
| AACCAGCCATGGTTGAACTG+CGG | + | chr8.2:22383660-22383679 | None:intergenic | 50.0% | |
| ACAAGCTGGGCAAAGGTGAT+TGG | - | chr8.2:22383076-22383095 | MS.gene61305:intron | 50.0% | |
| ATCTAGGCCCTACTCACTCT+TGG | + | chr8.2:22382729-22382748 | None:intergenic | 50.0% | |
| ATGTGTCTAGGCGGAAGAGA+CGG | - | chr8.2:22383184-22383203 | MS.gene61305:intron | 50.0% | |
| ATTAAATACCGGGCTGTGGC+AGG | - | chr8.2:22382325-22382344 | MS.gene61305:intron | 50.0% | |
| CAGGTCGAACTCTGGATTAC+CGG | - | chr8.2:22382525-22382544 | MS.gene61305:intron | 50.0% | |
| CATCCTTCCCAAGAGTGAGT+AGG | - | chr8.2:22382718-22382737 | MS.gene61305:CDS | 50.0% | |
| CATTCTTCATCGAGTGGAGG+AGG | + | chr8.2:22384031-22384050 | None:intergenic | 50.0% | |
| CCTGGTGAAAACCCTGATCA+TGG | - | chr8.2:22381698-22381717 | MS.gene61305:CDS | 50.0% | |
| CGACATCAATGCACAAGCGT+CGG | - | chr8.2:22384111-22384130 | MS.gene61305:intron | 50.0% | |
| CGGGAAGTAGAAGAAGAACC+AGG | + | chr8.2:22381755-22381774 | None:intergenic | 50.0% | |
| CTACTCACTCTTGGGAAGGA+TGG | + | chr8.2:22382720-22382739 | None:intergenic | 50.0% | |
| CTATGTTCCTCCTCAGTCCA+TGG | + | chr8.2:22383036-22383055 | None:intergenic | 50.0% | |
| CTCTTGGAATGTACTGGGGT+TGG | + | chr8.2:22384253-22384272 | None:intergenic | 50.0% | |
| GAACCAACTAGTTCCCTGGT+TGG | - | chr8.2:22383602-22383621 | MS.gene61305:intron | 50.0% | |
| GCAGGCACCTGATACTTCAA+TGG | - | chr8.2:22383937-22383956 | MS.gene61305:intron | 50.0% | |
| GCTGCAATGAGAACAACGAC+GGG | + | chr8.2:22381516-22381535 | None:intergenic | 50.0% | |
| GGACCTCATCCCCCATAATT+AGG | + | chr8.2:22382207-22382226 | None:intergenic | 50.0% | |
| GGATTGAACAAGCTGGGCAA+AGG | - | chr8.2:22383069-22383088 | MS.gene61305:intron | 50.0% | |
| GGCAAAGCAATGTGTCTAGG+CGG | - | chr8.2:22383175-22383194 | MS.gene61305:intron | 50.0% | |
| GGCTGCAATGAGAACAACGA+CGG | + | chr8.2:22381517-22381536 | None:intergenic | 50.0% | |
| GGGGTGAAACAAGCTAGACA+AGG | + | chr8.2:22382362-22382381 | None:intergenic | 50.0% | |
| GGTATAAGTCTCAGGCCATG+TGG | - | chr8.2:22382107-22382126 | MS.gene61305:intron | 50.0% | |
| GTGCCTAATTATGGGGGATG+AGG | - | chr8.2:22382201-22382220 | MS.gene61305:intron | 50.0% | |
| GTGTCTTGAACCTTCGGGAA+AGG | + | chr8.2:22382555-22382574 | None:intergenic | 50.0% | |
| GTTGAACCGCAGTTCAACCA+TGG | - | chr8.2:22383651-22383670 | MS.gene61305:intron | 50.0% | |
| GTTTACGAGACAGAGTCGAG+GGG | + | chr8.2:22384345-22384364 | None:intergenic | 50.0% | |
| TCTAGGCCCTACTCACTCTT+GGG | + | chr8.2:22382728-22382747 | None:intergenic | 50.0% | |
| TGGGCTCTTGGAATGTACTG+GGG | + | chr8.2:22384257-22384276 | None:intergenic | 50.0% | |
| ! | AACCCTGATCATGGTGCTGA+TGG | - | chr8.2:22381707-22381726 | MS.gene61305:CDS | 50.0% |
| ! | AGCACTTTTCCGGATCCCAT+CGG | + | chr8.2:22381603-22381622 | None:intergenic | 50.0% |
| ! | CCATGATCAGGGTTTTCACC+AGG | + | chr8.2:22381701-22381720 | None:intergenic | 50.0% |
| ! | CGACGCTTGTGCATTGATGT+CGG | + | chr8.2:22384113-22384132 | None:intergenic | 50.0% |
| ! | GACGCTTGTGCATTGATGTC+GGG | + | chr8.2:22384112-22384131 | None:intergenic | 50.0% |
| ! | GGAACTAGTTGGTTCCCTCT+CGG | + | chr8.2:22383597-22383616 | None:intergenic | 50.0% |
| ! | TCTTTCTTAGGAGCTGGCTC+AGG | + | chr8.2:22384211-22384230 | None:intergenic | 50.0% |
| AACCGCAGTTCAACCATGGC+TGG | - | chr8.2:22383655-22383674 | MS.gene61305:intron | 55.0% | |
| AATAGCCGGACCGAACCAAC+CGG | - | chr8.2:22383566-22383585 | MS.gene61305:intron | 55.0% | |
| CACAGAACAGTCCCACAAGC+TGG | + | chr8.2:22384412-22384431 | None:intergenic | 55.0% | |
| CACTCTTGGGAAGGATGGGA+AGG | + | chr8.2:22382715-22382734 | None:intergenic | 55.0% | |
| CGGTAATCCAGAGTTCGACC+TGG | + | chr8.2:22382527-22382546 | None:intergenic | 55.0% | |
| GAGGGAACCAACTAGTTCCC+TGG | - | chr8.2:22383598-22383617 | MS.gene61305:intron | 55.0% | |
| GTCGAACTCTGGATTACCGG+AGG | - | chr8.2:22382528-22382547 | MS.gene61305:intron | 55.0% | |
| GTGATTGGCGTGGAATTGCC+AGG | - | chr8.2:22383091-22383110 | MS.gene61305:intron | 55.0% | |
| ! | GGGTTTTCACCAGGTGAACC+AGG | + | chr8.2:22381692-22381711 | None:intergenic | 55.0% |
| !! | CTTAGCCACTATAGCGGGTC+CGG | - | chr8.2:22381635-22381654 | MS.gene61305:CDS | 55.0% |
| !! | TTAGCCACTATAGCGGGTCC+GGG | - | chr8.2:22381636-22381655 | MS.gene61305:CDS | 55.0% |
| AACCAACCGGTTGTGCCGAG+AGG | - | chr8.2:22383579-22383598 | MS.gene61305:intron | 60.0% | |
| AACCTTCGGGAAAGGGCCTC+CGG | + | chr8.2:22382547-22382566 | None:intergenic | 60.0% | |
| ACCAACCGGTTGTGCCGAGA+GGG | - | chr8.2:22383580-22383599 | MS.gene61305:intron | 60.0% | |
| AGTGGAGGAGGAGCAGGCAA+AGG | + | chr8.2:22384019-22384038 | None:intergenic | 60.0% | |
| CTGGGCAAAGGTGATTGGCG+TGG | - | chr8.2:22383081-22383100 | MS.gene61305:intron | 60.0% | |
| GGCCCTACTCACTCTTGGGA+AGG | + | chr8.2:22382724-22382743 | None:intergenic | 60.0% | |
| GTCAAACACCTGCCACAGCC+CGG | + | chr8.2:22382336-22382355 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGCAGGCAAA+GGG | + | chr8.2:22384018-22384037 | None:intergenic | 60.0% | |
| TCATCGAGTGGAGGAGGAGC+AGG | + | chr8.2:22384025-22384044 | None:intergenic | 60.0% | |
| TGGTTCCCTCTCGGCACAAC+CGG | + | chr8.2:22383588-22383607 | None:intergenic | 60.0% | |
| ! | AGGCACTCCATGGACTGAGG+AGG | - | chr8.2:22383026-22383045 | MS.gene61305:intron | 60.0% |
| ! | CTCGGCACAACCGGTTGGTT+CGG | + | chr8.2:22383579-22383598 | None:intergenic | 60.0% |
| ! | GCGTGACTGGCCACTTGAGT+AGG | + | chr8.2:22383138-22383157 | None:intergenic | 60.0% |
| ! | GTCGGGCTTTAATGGGGCAG+AGG | + | chr8.2:22384095-22384114 | None:intergenic | 60.0% |
| ! | TGCAGGCACTCCATGGACTG+AGG | - | chr8.2:22383023-22383042 | MS.gene61305:intron | 60.0% |
| !! | CACAACCGGTTGGTTCGGTC+CGG | + | chr8.2:22383574-22383593 | None:intergenic | 60.0% |
| !! | TGCACAAGCGTCGGCTTACC+CGG | - | chr8.2:22384120-22384139 | MS.gene61305:intron | 60.0% |
| CAGACCCGGACCCGCTATAG+TGG | + | chr8.2:22381643-22381662 | None:intergenic | 65.0% | |
| TACCGGAGGCCCTTTCCCGA+AGG | - | chr8.2:22382542-22382561 | MS.gene61305:intron | 65.0% | |
| TCCCTCTCGGCACAACCGGT+TGG | + | chr8.2:22383584-22383603 | None:intergenic | 65.0% | |
| !! | CACTATAGCGGGTCCGGGTC+TGG | - | chr8.2:22381641-22381660 | MS.gene61305:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 22381509 | 22384432 | 22381509 | ID=MS.gene61305 |
| chr8.2 | mRNA | 22381509 | 22384432 | 22381509 | ID=MS.gene61305.t1;Parent=MS.gene61305 |
| chr8.2 | exon | 22384153 | 22384432 | 22384153 | ID=MS.gene61305.t1.exon1;Parent=MS.gene61305.t1 |
| chr8.2 | CDS | 22384153 | 22384432 | 22384153 | ID=cds.MS.gene61305.t1;Parent=MS.gene61305.t1 |
| chr8.2 | exon | 22382705 | 22382913 | 22382705 | ID=MS.gene61305.t1.exon2;Parent=MS.gene61305.t1 |
| chr8.2 | CDS | 22382705 | 22382913 | 22382705 | ID=cds.MS.gene61305.t1;Parent=MS.gene61305.t1 |
| chr8.2 | exon | 22381509 | 22382000 | 22381509 | ID=MS.gene61305.t1.exon3;Parent=MS.gene61305.t1 |
| chr8.2 | CDS | 22381509 | 22382000 | 22381509 | ID=cds.MS.gene61305.t1;Parent=MS.gene61305.t1 |
| Gene Sequence |
| Protein sequence |
