Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057173.t1 | AAO61674.1 | 98.8 | 420 | 5 | 0 | 1 | 420 | 1 | 420 | 2.80E-226 | 794.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057173.t1 | Q8LBB2 | 70.7 | 410 | 111 | 2 | 12 | 420 | 23 | 424 | 3.4e-164 | 579.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057173.t1 | G7JLE4 | 98.8 | 420 | 5 | 0 | 1 | 420 | 13 | 432 | 2.0e-226 | 794.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050325 | MS.gene057173 | 0.840849 | 6.79E-58 | -1.69E-46 |
| MS.gene050327 | MS.gene057173 | 0.827595 | 1.43E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene057173 | -0.809859 | 1.54E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene057173 | -0.81451 | 1.49E-51 | -1.69E-46 |
| MS.gene053421 | MS.gene057173 | 0.824884 | 6.34E-54 | -1.69E-46 |
| MS.gene053562 | MS.gene057173 | 0.834169 | 3.50E-56 | -1.69E-46 |
| MS.gene053633 | MS.gene057173 | -0.806138 | 9.51E-50 | -1.69E-46 |
| MS.gene054003 | MS.gene057173 | -0.837728 | 4.38E-57 | -1.69E-46 |
| MS.gene054706 | MS.gene057173 | 0.801457 | 8.92E-49 | -1.69E-46 |
| MS.gene055202 | MS.gene057173 | 0.813501 | 2.48E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene057173 | -0.828981 | 6.64E-55 | -1.69E-46 |
| MS.gene057173 | MS.gene058157 | -0.863081 | 3.21E-64 | -1.69E-46 |
| MS.gene057173 | MS.gene05920 | 0.815138 | 1.08E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene059971 | 0.837684 | 4.50E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene060187 | 0.808272 | 3.36E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene060595 | 0.813625 | 2.33E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene061798 | 0.811153 | 8.07E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene063073 | 0.835075 | 2.07E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene064062 | 0.837935 | 3.87E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene065465 | 0.805066 | 1.60E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene065540 | -0.837176 | 6.07E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene069785 | -0.812145 | 4.91E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene072352 | 0.855054 | 8.16E-62 | -1.69E-46 |
| MS.gene057173 | MS.gene072468 | -0.810374 | 1.19E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene07329 | -0.836999 | 6.73E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene074357 | 0.832507 | 9.09E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene07741 | 0.805552 | 1.26E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene09022 | 0.834068 | 3.71E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene20878 | -0.807646 | 4.57E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene24258 | 0.817205 | 3.72E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene24474 | -0.806269 | 8.93E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene24491 | 0.813614 | 2.34E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene24737 | 0.816918 | 4.32E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene25726 | 0.811372 | 7.23E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene25964 | 0.837762 | 4.29E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene26982 | 0.826343 | 2.86E-54 | -1.69E-46 |
| MS.gene057173 | MS.gene27519 | 0.804571 | 2.03E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene28057 | 0.838568 | 2.66E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene29028 | -0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene057173 | MS.gene29115 | -0.803746 | 3.01E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene29708 | 0.832262 | 1.05E-55 | -1.69E-46 |
| MS.gene057173 | MS.gene30224 | 0.80472 | 1.89E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene30743 | -0.832587 | 8.68E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene31061 | 0.824504 | 7.79E-54 | -1.69E-46 |
| MS.gene057173 | MS.gene33139 | 0.807489 | 4.93E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene34092 | -0.850378 | 1.77E-60 | -1.69E-46 |
| MS.gene057173 | MS.gene35788 | -0.844215 | 8.68E-59 | -1.69E-46 |
| MS.gene057173 | MS.gene40101 | -0.803732 | 3.03E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene40110 | -0.80877 | 2.63E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene44108 | -0.812944 | 3.29E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene44639 | -0.824074 | 9.83E-54 | -1.69E-46 |
| MS.gene057173 | MS.gene44721 | 0.807761 | 4.32E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene45747 | -0.807106 | 5.94E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene46106 | 0.819772 | 9.74E-53 | -1.69E-46 |
| MS.gene057173 | MS.gene46900 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene46902 | 0.811649 | 6.30E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene48290 | 0.845437 | 4.06E-59 | -1.69E-46 |
| MS.gene057173 | MS.gene48584 | -0.802937 | 4.43E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene49206 | 0.814557 | 1.45E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene49208 | 0.804763 | 1.85E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene49263 | 0.881374 | 2.53E-70 | -1.69E-46 |
| MS.gene057173 | MS.gene49867 | -0.816992 | 4.15E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene51099 | 0.833826 | 4.27E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene51452 | 0.817498 | 3.20E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene54413 | -0.805962 | 1.04E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene54881 | -0.807258 | 5.52E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene55013 | 0.811151 | 8.08E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene55120 | 0.827685 | 1.36E-54 | -1.69E-46 |
| MS.gene057173 | MS.gene57365 | 0.811044 | 8.52E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene58000 | -0.80241 | 5.69E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene59273 | 0.819978 | 8.74E-53 | -1.69E-46 |
| MS.gene057173 | MS.gene61305 | 0.80579 | 1.13E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene63751 | 0.836763 | 7.73E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene63788 | -0.82841 | 9.13E-55 | -1.69E-46 |
| MS.gene057173 | MS.gene63969 | 0.818706 | 1.70E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene65516 | 0.825003 | 5.94E-54 | -1.69E-46 |
| MS.gene057173 | MS.gene66304 | 0.844059 | 9.56E-59 | -1.69E-46 |
| MS.gene057173 | MS.gene68121 | 0.83655 | 8.76E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene68457 | -0.80685 | 6.73E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene68722 | 0.877205 | 7.57E-69 | -1.69E-46 |
| MS.gene057173 | MS.gene69330 | -0.804809 | 1.81E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene69607 | 0.817302 | 3.54E-52 | -1.69E-46 |
| MS.gene057173 | MS.gene70491 | 0.81275 | 3.62E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene70627 | 0.838938 | 2.14E-57 | -1.69E-46 |
| MS.gene057173 | MS.gene71972 | 0.804721 | 1.89E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene72055 | -0.803779 | 2.96E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene72111 | 0.813103 | 3.03E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene72186 | 0.832821 | 7.60E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene72786 | -0.808892 | 2.48E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene73493 | -0.840238 | 9.81E-58 | -1.69E-46 |
| MS.gene057173 | MS.gene73893 | 0.81055 | 1.09E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene75631 | 0.830731 | 2.49E-55 | -1.69E-46 |
| MS.gene057173 | MS.gene78356 | 0.805624 | 1.22E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene78602 | -0.804219 | 2.40E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene89097 | 0.814388 | 1.58E-51 | -1.69E-46 |
| MS.gene057173 | MS.gene90129 | -0.807976 | 3.89E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene90785 | -0.804932 | 1.70E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene91316 | 0.820201 | 7.77E-53 | -1.69E-46 |
| MS.gene057173 | MS.gene91597 | -0.804986 | 1.66E-49 | -1.69E-46 |
| MS.gene057173 | MS.gene92777 | 0.83274 | 7.95E-56 | -1.69E-46 |
| MS.gene057173 | MS.gene99504 | 0.806577 | 7.69E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057173.t1 | MTR_4g103550 | 98.810 | 420 | 5 | 0 | 1 | 420 | 13 | 432 | 0.0 | 859 |
| MS.gene057173.t1 | MTR_4g103550 | 97.840 | 324 | 7 | 0 | 1 | 324 | 13 | 336 | 0.0 | 654 |
| MS.gene057173.t1 | MTR_5g038570 | 35.309 | 405 | 226 | 3 | 35 | 408 | 40 | 439 | 6.31e-87 | 272 |
| MS.gene057173.t1 | MTR_3g116850 | 23.514 | 387 | 248 | 7 | 28 | 393 | 22 | 381 | 1.28e-29 | 119 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057173.t1 | AT3G48530 | 72.195 | 410 | 105 | 2 | 12 | 420 | 23 | 424 | 0.0 | 610 |
| MS.gene057173.t1 | AT1G69800 | 42.683 | 246 | 136 | 2 | 160 | 404 | 192 | 433 | 2.62e-65 | 216 |
| MS.gene057173.t1 | AT1G69800 | 41.176 | 85 | 50 | 0 | 33 | 117 | 35 | 119 | 1.26e-15 | 79.0 |
| MS.gene057173.t1 | AT1G69800 | 41.379 | 261 | 143 | 3 | 150 | 404 | 206 | 462 | 1.02e-64 | 215 |
| MS.gene057173.t1 | AT1G69800 | 41.176 | 85 | 50 | 0 | 33 | 117 | 64 | 148 | 1.37e-15 | 79.0 |
| MS.gene057173.t1 | AT1G69800 | 41.618 | 173 | 101 | 0 | 160 | 332 | 192 | 364 | 1.85e-45 | 161 |
| MS.gene057173.t1 | AT1G69800 | 41.176 | 85 | 50 | 0 | 33 | 117 | 35 | 119 | 7.49e-16 | 79.0 |
Find 107 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAACCCCACGGCTATTT+TGG | 0.161714 | 8.1:+20759453 | MS.gene057173:CDS |
| CTATAATCATGATAGATTTC+TGG | 0.217599 | 8.1:-20758943 | None:intergenic |
| CTCATCCCAAGTTTGGCTTC+TGG | 0.255910 | 8.1:-20757131 | None:intergenic |
| TCATCCCAAGTTTGGCTTCT+GGG | 0.256233 | 8.1:-20757130 | None:intergenic |
| GGATGAGAGTTGAAGATCTA+TGG | 0.266856 | 8.1:+20757147 | MS.gene057173:CDS |
| ATGGGCTCCGTTTCTTGCTT+TGG | 0.280669 | 8.1:+20758339 | MS.gene057173:CDS |
| TTCAACTCTCATCCCAAGTT+TGG | 0.288163 | 8.1:-20757138 | None:intergenic |
| CAGAAATCTATCATGATTAT+AGG | 0.291433 | 8.1:+20758944 | MS.gene057173:CDS |
| GGATCTGCAGTGACAACTTC+TGG | 0.299007 | 8.1:+20758142 | MS.gene057173:CDS |
| TTAGTGTGATTAGTCCTTCA+AGG | 0.332347 | 8.1:-20759407 | None:intergenic |
| ACTTCAATGGTTCGAAAGTT+GGG | 0.335155 | 8.1:+20758507 | MS.gene057173:CDS |
| CAAGCATTAAGTTTGTCATT+AGG | 0.345513 | 8.1:-20757194 | None:intergenic |
| AAACAGGTTCGAGATATTTC+AGG | 0.361042 | 8.1:+20758307 | MS.gene057173:intron |
| TTGACAAAGAGCAAATTCAT+AGG | 0.378131 | 8.1:+20759358 | MS.gene057173:CDS |
| TATAATCATGATAGATTTCT+GGG | 0.381852 | 8.1:-20758942 | None:intergenic |
| TCATCTCTTTAAATGCTTGA+AGG | 0.382534 | 8.1:-20758822 | None:intergenic |
| ATCGGAATAGTTGAGTTTGC+TGG | 0.385140 | 8.1:+20757668 | MS.gene057173:CDS |
| TCAATCCAACTAGCATCTTC+AGG | 0.389432 | 8.1:-20757638 | None:intergenic |
| AGTTTGGCTTCTGGGCTCCT+TGG | 0.394246 | 8.1:-20757122 | None:intergenic |
| CACACCTTGATGATCTGTTT+TGG | 0.400621 | 8.1:-20758571 | None:intergenic |
| GTGAATTCATTACATGCAAA+AGG | 0.403501 | 8.1:+20759304 | MS.gene057173:CDS |
| GACTTCAATGGTTCGAAAGT+TGG | 0.404591 | 8.1:+20758506 | MS.gene057173:CDS |
| TCTTTAAATGCTTGAAGGAC+TGG | 0.413459 | 8.1:-20758817 | None:intergenic |
| GGCAAAGGAAAAGCAGAAAC+AGG | 0.426999 | 8.1:-20757230 | None:intergenic |
| TAATGAATTCACTTGACATT+GGG | 0.434316 | 8.1:-20759293 | None:intergenic |
| TCCCTCTACCTGCTAATAGC+AGG | 0.435441 | 8.1:+20759496 | MS.gene057173:CDS |
| AGTTTGCTGGAATTGTTGTA+TGG | 0.438748 | 8.1:+20757681 | MS.gene057173:CDS |
| GGCTGAAGCTGTGAAAATAT+TGG | 0.439718 | 8.1:+20757571 | MS.gene057173:CDS |
| GTTGGAGTGGATGGACTCCT+AGG | 0.442102 | 8.1:-20758049 | None:intergenic |
| AGGAGCCCAGAAGCCAAACT+TGG | 0.447648 | 8.1:+20757125 | MS.gene057173:CDS |
| TTGGAGTGGATGGACTCCTA+GGG | 0.452562 | 8.1:-20758048 | None:intergenic |
| GCTCGAGAACTCGAAGCCTT+AGG | 0.456172 | 8.1:+20758115 | MS.gene057173:CDS |
| CTTGCACTGGTTGGAGTGGA+TGG | 0.469031 | 8.1:-20758058 | None:intergenic |
| CAGAATGTGCCGGACTTCAA+TGG | 0.469578 | 8.1:+20758494 | MS.gene057173:CDS |
| AATAAAATCAGATGCTACCT+TGG | 0.469606 | 8.1:+20757550 | MS.gene057173:CDS |
| GACCTCCGTTAGAAGCTACT+TGG | 0.479934 | 8.1:+20759251 | MS.gene057173:CDS |
| AGTAGCTTCTAACGGAGGTC+AGG | 0.486459 | 8.1:-20759248 | None:intergenic |
| GAGTGTTCCTGTGGTAGACT+TGG | 0.493238 | 8.1:+20758417 | MS.gene057173:CDS |
| GCTATTGCAGCCGCAGCAAA+CGG | 0.494235 | 8.1:+20758082 | MS.gene057173:CDS |
| GAACTCGAAGCCTTAGGCCT+CGG | 0.497616 | 8.1:+20758121 | MS.gene057173:CDS |
| GACGATGATGGGAACCTTGA+AGG | 0.502311 | 8.1:+20759393 | MS.gene057173:CDS |
| GTCTATGTTGTGGACGATGA+TGG | 0.505650 | 8.1:+20759381 | MS.gene057173:CDS |
| CCCTCTACCTGCTAATAGCA+GGG | 0.507334 | 8.1:+20759497 | MS.gene057173:CDS |
| GCAATAGCACTTGCACTGGT+TGG | 0.511188 | 8.1:-20758067 | None:intergenic |
| TGTTAAACCCTGCTATTAGC+AGG | 0.522009 | 8.1:-20759504 | None:intergenic |
| GGTGCATCAACATCCACAAC+AGG | 0.523558 | 8.1:-20757617 | None:intergenic |
| ACCAACATCAGATAGTTCCT+TGG | 0.525523 | 8.1:-20758533 | None:intergenic |
| ACCCGCCGTGATTCATATGT+TGG | 0.528785 | 8.1:+20758471 | MS.gene057173:CDS |
| AACAGGTTCGAGATATTTCA+GGG | 0.530914 | 8.1:+20758308 | MS.gene057173:intron |
| ATGCACCTGAAGATGCTAGT+TGG | 0.531504 | 8.1:+20757633 | MS.gene057173:CDS |
| AGAGGTGGCGCCACGGCAGT+TGG | 0.536321 | 8.1:+20758880 | MS.gene057173:CDS |
| CACTGCAGATCCGAGGCCTA+AGG | 0.536741 | 8.1:-20758131 | None:intergenic |
| TGAATTCATTACATGCAAAA+GGG | 0.536868 | 8.1:+20759305 | MS.gene057173:CDS |
| CCTGTGGTAGACTTGGGTGC+TGG | 0.537100 | 8.1:+20758424 | MS.gene057173:CDS |
| ACCCTGCTATTAGCAGGTAG+AGG | 0.541141 | 8.1:-20759498 | None:intergenic |
| ACTTTCGAACCATTGAAGTC+CGG | 0.551209 | 8.1:-20758503 | None:intergenic |
| TTCAAGCATTTAAAGAGATG+AGG | 0.552251 | 8.1:+20758824 | MS.gene057173:CDS |
| GTAATGAATTCACTTGACAT+TGG | 0.553550 | 8.1:-20759294 | None:intergenic |
| GATGAGAGTTGAAGATCTAT+GGG | 0.553732 | 8.1:+20757148 | MS.gene057173:CDS |
| GATCTCTCCAAAGCAAGAAA+CGG | 0.557531 | 8.1:-20758346 | None:intergenic |
| CTTCTCCAAGTAGCTTCTAA+CGG | 0.558499 | 8.1:-20759256 | None:intergenic |
| TGACAGAACTATTACAGTGA+AGG | 0.559685 | 8.1:+20759221 | MS.gene057173:intron |
| CCCTGCTATTAGCAGGTAGA+GGG | 0.561914 | 8.1:-20759497 | None:intergenic |
| GTGGATGGACTCCTAGGGGA+TGG | 0.565217 | 8.1:-20758043 | None:intergenic |
| ACCAAGGAACTATCTGATGT+TGG | 0.572252 | 8.1:+20758532 | MS.gene057173:CDS |
| CATATGTTGGCAGAATGTGC+CGG | 0.573538 | 8.1:+20758484 | MS.gene057173:CDS |
| GGCTGCAATAGCACTTGCAC+TGG | 0.573713 | 8.1:-20758071 | None:intergenic |
| TATTCTGAGTGCACCTGTTG+TGG | 0.573842 | 8.1:+20757604 | MS.gene057173:CDS |
| ATATTTCAGGGACATTCCGA+TGG | 0.579686 | 8.1:+20758320 | MS.gene057173:CDS |
| AATTCATAGGGTCTATGTTG+TGG | 0.580570 | 8.1:+20759371 | MS.gene057173:CDS |
| CTTCAATGGTTCGAAAGTTG+GGG | 0.582143 | 8.1:+20758508 | MS.gene057173:CDS |
| TGACAAAGAGCAAATTCATA+GGG | 0.586419 | 8.1:+20759359 | MS.gene057173:CDS |
| GAAATCACCAAAATAGCCGT+GGG | 0.590135 | 8.1:-20759460 | None:intergenic |
| CTTAGAAAGCAGCAAAAGCA+TGG | 0.590532 | 8.1:-20758383 | None:intergenic |
| GATGGACTCCTAGGGGATGG+AGG | 0.592826 | 8.1:-20758040 | None:intergenic |
| GGAGCCCAGAAGCCAAACTT+GGG | 0.598020 | 8.1:+20757126 | MS.gene057173:CDS |
| AGAAATCACCAAAATAGCCG+TGG | 0.598829 | 8.1:-20759461 | None:intergenic |
| AGCACTTGCACTGGTTGGAG+TGG | 0.599023 | 8.1:-20758062 | None:intergenic |
| GGGGTGCCTGTAATCAAAAG+AGG | 0.599309 | 8.1:+20758862 | MS.gene057173:CDS |
| GCCAACATATGAATCACGGC+GGG | 0.600876 | 8.1:-20758472 | None:intergenic |
| AGTCTGAACCTCCATCCCCT+AGG | 0.601038 | 8.1:+20758032 | MS.gene057173:intron |
| GCTTATATTACCAACTGCCG+TGG | 0.604915 | 8.1:-20758890 | None:intergenic |
| AGAAGAGGGAATAATGGCAA+TGG | 0.605880 | 8.1:+20757082 | None:intergenic |
| TCTATGTTGTGGACGATGAT+GGG | 0.613189 | 8.1:+20759382 | MS.gene057173:CDS |
| AAGCAAGAAACGGAGCCCAT+CGG | 0.613620 | 8.1:-20758336 | None:intergenic |
| AGATCTATGGGATGTTCAAG+AGG | 0.614406 | 8.1:+20757160 | MS.gene057173:CDS |
| CACTAAGAGATATCATCTCA+AGG | 0.615021 | 8.1:+20759424 | MS.gene057173:CDS |
| TTCTGCCAACATATGAATCA+CGG | 0.617203 | 8.1:-20758476 | None:intergenic |
| AGTGTTCCTGTGGTAGACTT+GGG | 0.619646 | 8.1:+20758418 | MS.gene057173:CDS |
| GTTCGAAAGTTGGGGAACCA+AGG | 0.622320 | 8.1:+20758516 | MS.gene057173:CDS |
| CTACAATGAGAGAGATGCCA+AGG | 0.622743 | 8.1:+20757105 | MS.gene057173:CDS |
| CCAGCACCCAAGTCTACCAC+AGG | 0.626540 | 8.1:-20758424 | None:intergenic |
| AGTTGGATTGATAGATACAT+CGG | 0.633207 | 8.1:+20757650 | MS.gene057173:CDS |
| TATTTCAGGGACATTCCGAT+GGG | 0.633257 | 8.1:+20758321 | MS.gene057173:CDS |
| AAAAGTATTTCCGTTTGCTG+CGG | 0.635232 | 8.1:-20758092 | None:intergenic |
| CAAAATGAAGAGTGTTCCTG+TGG | 0.635403 | 8.1:+20758408 | MS.gene057173:CDS |
| TGGAGTGGATGGACTCCTAG+GGG | 0.642969 | 8.1:-20758047 | None:intergenic |
| AATCAAAAGAGGTGGCGCCA+CGG | 0.646139 | 8.1:+20758873 | MS.gene057173:CDS |
| GTGCCTGTAATCAAAAGAGG+TGG | 0.647223 | 8.1:+20758865 | MS.gene057173:CDS |
| TGAACTTTATAAGAACACCA+AGG | 0.657415 | 8.1:+20758192 | MS.gene057173:CDS |
| AAGTTGTCACTGCAGATCCG+AGG | 0.658303 | 8.1:-20758138 | None:intergenic |
| GACACCAAAACAGATCATCA+AGG | 0.660300 | 8.1:+20758567 | MS.gene057173:CDS |
| CTCCAAGTAGCTTCTAACGG+AGG | 0.681992 | 8.1:-20759253 | None:intergenic |
| AGGCTAGTACATGAACCCCA+CGG | 0.706623 | 8.1:+20759444 | MS.gene057173:CDS |
| ATAATCATGATAGATTTCTG+GGG | 0.708208 | 8.1:-20758941 | None:intergenic |
| TGCCAACATATGAATCACGG+CGG | 0.717560 | 8.1:-20758473 | None:intergenic |
| AAATCACCAAAATAGCCGTG+GGG | 0.760400 | 8.1:-20759459 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATATATGTACTTTTTGT+TGG | + | chr8.1:20757884-20757903 | MS.gene057173:intron | 15.0% |
| !! | AAAAAGACATAAACCATAAA+AGG | - | chr8.1:20757479-20757498 | None:intergenic | 20.0% |
| !! | TATAATCATGATAGATTTCT+GGG | - | chr8.1:20758945-20758964 | None:intergenic | 20.0% |
| !!! | TTATGGTTTATGTCTTTTTT+GGG | + | chr8.1:20757480-20757499 | MS.gene057173:intron | 20.0% |
| !!! | TTTATGGTTTATGTCTTTTT+TGG | + | chr8.1:20757479-20757498 | MS.gene057173:intron | 20.0% |
| ! | AATTATGCAGAATTCATACT+TGG | - | chr8.1:20758634-20758653 | None:intergenic | 25.0% |
| ! | AGATGGATGAATTTAATACA+TGG | + | chr8.1:20757908-20757927 | MS.gene057173:intron | 25.0% |
| ! | ATAATCATGATAGATTTCTG+GGG | - | chr8.1:20758944-20758963 | None:intergenic | 25.0% |
| ! | CAGAAATCTATCATGATTAT+AGG | + | chr8.1:20758944-20758963 | MS.gene057173:CDS | 25.0% |
| ! | CTATAATCATGATAGATTTC+TGG | - | chr8.1:20758946-20758965 | None:intergenic | 25.0% |
| ! | TAATGAATTCACTTGACATT+GGG | - | chr8.1:20759296-20759315 | None:intergenic | 25.0% |
| ! | TCACTTTCAGAATAAAAATG+AGG | + | chr8.1:20757751-20757770 | MS.gene057173:intron | 25.0% |
| ! | TGAATTCATTACATGCAAAA+GGG | + | chr8.1:20759305-20759324 | MS.gene057173:CDS | 25.0% |
| ! | TTTCATTACTTCATACTCAT+TGG | + | chr8.1:20759186-20759205 | MS.gene057173:intron | 25.0% |
| !! | TGGATTATTTCATTCTTTTC+AGG | + | chr8.1:20758780-20758799 | MS.gene057173:intron | 25.0% |
| !!! | TATTTTGGTGATTTCTTTGA+TGG | + | chr8.1:20759468-20759487 | MS.gene057173:CDS | 25.0% |
| AACATTTCTCAGCAAAATCA+AGG | - | chr8.1:20759018-20759037 | None:intergenic | 30.0% | |
| AAGCTTACTTTACTTGAAAG+GGG | - | chr8.1:20758737-20758756 | None:intergenic | 30.0% | |
| AATAAAATCAGATGCTACCT+TGG | + | chr8.1:20757550-20757569 | MS.gene057173:CDS | 30.0% | |
| AATACAAACTCATTAGTAGC+TGG | - | chr8.1:20758259-20758278 | None:intergenic | 30.0% | |
| ACAAGCTTACTTTACTTGAA+AGG | - | chr8.1:20758739-20758758 | None:intergenic | 30.0% | |
| ACACACATTTAAGAAATGCA+GGG | - | chr8.1:20758682-20758701 | None:intergenic | 30.0% | |
| ACGATAGTTTATCAGAATCA+TGG | + | chr8.1:20757369-20757388 | MS.gene057173:intron | 30.0% | |
| AGTTGGATTGATAGATACAT+CGG | + | chr8.1:20757650-20757669 | MS.gene057173:CDS | 30.0% | |
| CAAGCATTAAGTTTGTCATT+AGG | - | chr8.1:20757197-20757216 | None:intergenic | 30.0% | |
| CAAGCTTACTTTACTTGAAA+GGG | - | chr8.1:20758738-20758757 | None:intergenic | 30.0% | |
| CTGAGAAATGTTGTCAAATA+TGG | + | chr8.1:20759026-20759045 | MS.gene057173:intron | 30.0% | |
| CTTAAATGTGTGTGCATATA+TGG | + | chr8.1:20758689-20758708 | MS.gene057173:intron | 30.0% | |
| GAAAAAAGATATCAGCAATG+TGG | - | chr8.1:20759145-20759164 | None:intergenic | 30.0% | |
| GAAAATCACTTCAATAGAAC+AGG | - | chr8.1:20757965-20757984 | None:intergenic | 30.0% | |
| GTAATGAATTCACTTGACAT+TGG | - | chr8.1:20759297-20759316 | None:intergenic | 30.0% | |
| GTGAATTCATTACATGCAAA+AGG | + | chr8.1:20759304-20759323 | MS.gene057173:CDS | 30.0% | |
| TAAAGAGATGAGGAAAAAGA+GGG | + | chr8.1:20758834-20758853 | MS.gene057173:CDS | 30.0% | |
| TCATCTCTTTAAATGCTTGA+AGG | - | chr8.1:20758825-20758844 | None:intergenic | 30.0% | |
| TGAACTTTATAAGAACACCA+AGG | + | chr8.1:20758192-20758211 | MS.gene057173:CDS | 30.0% | |
| TGACAAAGAGCAAATTCATA+GGG | + | chr8.1:20759359-20759378 | MS.gene057173:CDS | 30.0% | |
| TTAAAGAGATGAGGAAAAAG+AGG | + | chr8.1:20758833-20758852 | MS.gene057173:CDS | 30.0% | |
| TTCAAGCATTTAAAGAGATG+AGG | + | chr8.1:20758824-20758843 | MS.gene057173:CDS | 30.0% | |
| TTGACAAAGAGCAAATTCAT+AGG | + | chr8.1:20759358-20759377 | MS.gene057173:CDS | 30.0% | |
| TTGCAAGTTTCAGATTCATA+TGG | - | chr8.1:20757790-20757809 | None:intergenic | 30.0% | |
| ! | ACATGCACATAATTTTCATC+TGG | - | chr8.1:20757341-20757360 | None:intergenic | 30.0% |
| ! | AGCTAATGTGATAATGTTGT+TGG | + | chr8.1:20758008-20758027 | MS.gene057173:intron | 30.0% |
| ! | ATCACAATTTAAAACCTCTG+TGG | - | chr8.1:20758977-20758996 | None:intergenic | 30.0% |
| ! | CATGCACATAATTTTCATCT+GGG | - | chr8.1:20757340-20757359 | None:intergenic | 30.0% |
| ! | CTAGACACAGTTCTAATAAA+AGG | - | chr8.1:20759121-20759140 | None:intergenic | 30.0% |
| !! | ATGTACTTTTTGTTGGTAGA+TGG | + | chr8.1:20757891-20757910 | MS.gene057173:intron | 30.0% |
| !!! | TCATTCTTTTCAGGTTTATG+AGG | + | chr8.1:20758789-20758808 | MS.gene057173:intron | 30.0% |
| AAACAGGTTCGAGATATTTC+AGG | + | chr8.1:20758307-20758326 | MS.gene057173:intron | 35.0% | |
| AACAGGTTCGAGATATTTCA+GGG | + | chr8.1:20758308-20758327 | MS.gene057173:intron | 35.0% | |
| AATTCATAGGGTCTATGTTG+TGG | + | chr8.1:20759371-20759390 | MS.gene057173:CDS | 35.0% | |
| ACTTCAATGGTTCGAAAGTT+GGG | + | chr8.1:20758507-20758526 | MS.gene057173:CDS | 35.0% | |
| AGATACACACTAAACTACCT+TGG | - | chr8.1:20757265-20757284 | None:intergenic | 35.0% | |
| ATTAGTCACACATGCATGTT+TGG | - | chr8.1:20757434-20757453 | None:intergenic | 35.0% | |
| CACACACATTTAAGAAATGC+AGG | - | chr8.1:20758683-20758702 | None:intergenic | 35.0% | |
| CACTAAGAGATATCATCTCA+AGG | + | chr8.1:20759424-20759443 | MS.gene057173:CDS | 35.0% | |
| GATCTTGATGAACTTGACAA+TGG | + | chr8.1:20758760-20758779 | MS.gene057173:intron | 35.0% | |
| GATGAGAGTTGAAGATCTAT+GGG | + | chr8.1:20757148-20757167 | MS.gene057173:CDS | 35.0% | |
| TAGACATTGCAAAACAACCT+TGG | - | chr8.1:20758212-20758231 | None:intergenic | 35.0% | |
| TCTTTAAATGCTTGAAGGAC+TGG | - | chr8.1:20758820-20758839 | None:intergenic | 35.0% | |
| TGACAGAACTATTACAGTGA+AGG | + | chr8.1:20759221-20759240 | MS.gene057173:intron | 35.0% | |
| TTCTGCCAACATATGAATCA+CGG | - | chr8.1:20758479-20758498 | None:intergenic | 35.0% | |
| ! | ATTGTGTGTGTGTCCTTTTA+TGG | + | chr8.1:20757463-20757482 | MS.gene057173:intron | 35.0% |
| ! | TGTTGTATGGATTTTGCATC+AGG | + | chr8.1:20757694-20757713 | MS.gene057173:CDS | 35.0% |
| ! | TTAGTGTGATTAGTCCTTCA+AGG | - | chr8.1:20759410-20759429 | None:intergenic | 35.0% |
| !! | AAAAGTATTTCCGTTTGCTG+CGG | - | chr8.1:20758095-20758114 | None:intergenic | 35.0% |
| !! | AGTTTGCTGGAATTGTTGTA+TGG | + | chr8.1:20757681-20757700 | MS.gene057173:CDS | 35.0% |
| !!! | AAACTACCTTGGTTTTTAGC+AGG | - | chr8.1:20757254-20757273 | None:intergenic | 35.0% |
| !!! | AACTTCTGGAAACTTTTTCG+AGG | + | chr8.1:20758156-20758175 | MS.gene057173:CDS | 35.0% |
| !!! | TAGCTAACTTTTTCGCAAAC+AGG | + | chr8.1:20758291-20758310 | MS.gene057173:intron | 35.0% |
| AAATCACCAAAATAGCCGTG+GGG | - | chr8.1:20759462-20759481 | None:intergenic | 40.0% | |
| ACCAACATCAGATAGTTCCT+TGG | - | chr8.1:20758536-20758555 | None:intergenic | 40.0% | |
| ACCAAGGAACTATCTGATGT+TGG | + | chr8.1:20758532-20758551 | MS.gene057173:CDS | 40.0% | |
| ACTTTCGAACCATTGAAGTC+CGG | - | chr8.1:20758506-20758525 | None:intergenic | 40.0% | |
| AGAAATCACCAAAATAGCCG+TGG | - | chr8.1:20759464-20759483 | None:intergenic | 40.0% | |
| AGATCTATGGGATGTTCAAG+AGG | + | chr8.1:20757160-20757179 | MS.gene057173:CDS | 40.0% | |
| ATATTTCAGGGACATTCCGA+TGG | + | chr8.1:20758320-20758339 | MS.gene057173:CDS | 40.0% | |
| ATCGGAATAGTTGAGTTTGC+TGG | + | chr8.1:20757668-20757687 | MS.gene057173:CDS | 40.0% | |
| CATGCATGTGTGACTAATTG+AGG | + | chr8.1:20757436-20757455 | MS.gene057173:intron | 40.0% | |
| CTCAGCAAAATCAAGGATTG+TGG | - | chr8.1:20759011-20759030 | None:intergenic | 40.0% | |
| CTTAGAAAGCAGCAAAAGCA+TGG | - | chr8.1:20758386-20758405 | None:intergenic | 40.0% | |
| CTTCAATGGTTCGAAAGTTG+GGG | + | chr8.1:20758508-20758527 | MS.gene057173:CDS | 40.0% | |
| CTTCTCCAAGTAGCTTCTAA+CGG | - | chr8.1:20759259-20759278 | None:intergenic | 40.0% | |
| GAAATCACCAAAATAGCCGT+GGG | - | chr8.1:20759463-20759482 | None:intergenic | 40.0% | |
| GACACCAAAACAGATCATCA+AGG | + | chr8.1:20758567-20758586 | MS.gene057173:CDS | 40.0% | |
| GACTTCAATGGTTCGAAAGT+TGG | + | chr8.1:20758506-20758525 | MS.gene057173:CDS | 40.0% | |
| GATCTCTCCAAAGCAAGAAA+CGG | - | chr8.1:20758349-20758368 | None:intergenic | 40.0% | |
| GGATGAGAGTTGAAGATCTA+TGG | + | chr8.1:20757147-20757166 | MS.gene057173:CDS | 40.0% | |
| GGCTGAAGCTGTGAAAATAT+TGG | + | chr8.1:20757571-20757590 | MS.gene057173:CDS | 40.0% | |
| GTTGTCAAATATGGCTGATG+CGG | + | chr8.1:20759035-20759054 | MS.gene057173:intron | 40.0% | |
| TATTTCAGGGACATTCCGAT+GGG | + | chr8.1:20758321-20758340 | MS.gene057173:CDS | 40.0% | |
| TCAATCCAACTAGCATCTTC+AGG | - | chr8.1:20757641-20757660 | None:intergenic | 40.0% | |
| TCTATGTTGTGGACGATGAT+GGG | + | chr8.1:20759382-20759401 | MS.gene057173:CDS | 40.0% | |
| TCTGACAAACCAACCAATTG+TGG | + | chr8.1:20757406-20757425 | MS.gene057173:intron | 40.0% | |
| TGCAGAATTCATACTTGGCA+AGG | - | chr8.1:20758629-20758648 | None:intergenic | 40.0% | |
| TGCATGTTTGGTACCACAAT+TGG | - | chr8.1:20757422-20757441 | None:intergenic | 40.0% | |
| TGTTTGGTACCACAATTGGT+TGG | - | chr8.1:20757418-20757437 | None:intergenic | 40.0% | |
| TTATAGGTATGTCACCACAG+AGG | + | chr8.1:20758960-20758979 | MS.gene057173:intron | 40.0% | |
| TTCAACTCTCATCCCAAGTT+TGG | - | chr8.1:20757141-20757160 | None:intergenic | 40.0% | |
| ! | TATTTTCACAGCTTCAGCCA+AGG | - | chr8.1:20757570-20757589 | None:intergenic | 40.0% |
| !! | CAAAATGAAGAGTGTTCCTG+TGG | + | chr8.1:20758408-20758427 | MS.gene057173:CDS | 40.0% |
| !! | CACACCTTGATGATCTGTTT+TGG | - | chr8.1:20758574-20758593 | None:intergenic | 40.0% |
| !! | TGGTTGGTTTGTCAGAATCA+CGG | - | chr8.1:20757402-20757421 | None:intergenic | 40.0% |
| !!! | ATCTGTTTTGGTGTCACAAG+GGG | - | chr8.1:20758562-20758581 | None:intergenic | 40.0% |
| !!! | GATCTGTTTTGGTGTCACAA+GGG | - | chr8.1:20758563-20758582 | None:intergenic | 40.0% |
| !!! | TGATCTGTTTTGGTGTCACA+AGG | - | chr8.1:20758564-20758583 | None:intergenic | 40.0% |
| AGTGTTCCTGTGGTAGACTT+GGG | + | chr8.1:20758418-20758437 | MS.gene057173:CDS | 45.0% | |
| ATGAGGAAAAAGAGGGTTGG+AGG | + | chr8.1:20758841-20758860 | MS.gene057173:CDS | 45.0% | |
| ATGCACCTGAAGATGCTAGT+TGG | + | chr8.1:20757633-20757652 | MS.gene057173:CDS | 45.0% | |
| CATATGTTGGCAGAATGTGC+CGG | + | chr8.1:20758484-20758503 | MS.gene057173:CDS | 45.0% | |
| CCTTTGCCTGCTAAAAACCA+AGG | + | chr8.1:20757245-20757264 | MS.gene057173:CDS | 45.0% | |
| CTACAATGAGAGAGATGCCA+AGG | + | chr8.1:20757105-20757124 | MS.gene057173:CDS | 45.0% | |
| GAGATGAGGAAAAAGAGGGT+TGG | + | chr8.1:20758838-20758857 | MS.gene057173:CDS | 45.0% | |
| GATGTCTTTGACCGTGATTG+AGG | - | chr8.1:20759061-20759080 | None:intergenic | 45.0% | |
| GCTTATATTACCAACTGCCG+TGG | - | chr8.1:20758893-20758912 | None:intergenic | 45.0% | |
| GGCAAAGGAAAAGCAGAAAC+AGG | - | chr8.1:20757233-20757252 | None:intergenic | 45.0% | |
| GGCAAGGTTCAATGCAATGA+GGG | - | chr8.1:20758613-20758632 | None:intergenic | 45.0% | |
| GTCTATGTTGTGGACGATGA+TGG | + | chr8.1:20759381-20759400 | MS.gene057173:CDS | 45.0% | |
| GTGCCTGTAATCAAAAGAGG+TGG | + | chr8.1:20758865-20758884 | MS.gene057173:CDS | 45.0% | |
| TATTCTGAGTGCACCTGTTG+TGG | + | chr8.1:20757604-20757623 | MS.gene057173:CDS | 45.0% | |
| TGAGGAAAAAGAGGGTTGGA+GGG | + | chr8.1:20758842-20758861 | MS.gene057173:CDS | 45.0% | |
| TGCCAACATATGAATCACGG+CGG | - | chr8.1:20758476-20758495 | None:intergenic | 45.0% | |
| TGGCAAGGTTCAATGCAATG+AGG | - | chr8.1:20758614-20758633 | None:intergenic | 45.0% | |
| ! | TCATCCCAAGTTTGGCTTCT+GGG | - | chr8.1:20757133-20757152 | None:intergenic | 45.0% |
| !!! | CCTTGGTTTTTAGCAGGCAA+AGG | - | chr8.1:20757248-20757267 | None:intergenic | 45.0% |
| AAGCAAGAAACGGAGCCCAT+CGG | - | chr8.1:20758339-20758358 | None:intergenic | 50.0% | |
| AAGTTGTCACTGCAGATCCG+AGG | - | chr8.1:20758141-20758160 | None:intergenic | 50.0% | |
| AATCAAAAGAGGTGGCGCCA+CGG | + | chr8.1:20758873-20758892 | MS.gene057173:CDS | 50.0% | |
| ACCCGCCGTGATTCATATGT+TGG | + | chr8.1:20758471-20758490 | MS.gene057173:CDS | 50.0% | |
| ACCCTGCTATTAGCAGGTAG+AGG | - | chr8.1:20759501-20759520 | None:intergenic | 50.0% | |
| AGGCTAGTACATGAACCCCA+CGG | + | chr8.1:20759444-20759463 | MS.gene057173:CDS | 50.0% | |
| AGTAGCTTCTAACGGAGGTC+AGG | - | chr8.1:20759251-20759270 | None:intergenic | 50.0% | |
| ATGGGCTCCGTTTCTTGCTT+TGG | + | chr8.1:20758339-20758358 | MS.gene057173:CDS | 50.0% | |
| CAGAATGTGCCGGACTTCAA+TGG | + | chr8.1:20758494-20758513 | MS.gene057173:CDS | 50.0% | |
| CCCTCTACCTGCTAATAGCA+GGG | + | chr8.1:20759497-20759516 | MS.gene057173:CDS | 50.0% | |
| CCCTGCTATTAGCAGGTAGA+GGG | - | chr8.1:20759500-20759519 | None:intergenic | 50.0% | |
| CTCCAAGTAGCTTCTAACGG+AGG | - | chr8.1:20759256-20759275 | None:intergenic | 50.0% | |
| GACCTCCGTTAGAAGCTACT+TGG | + | chr8.1:20759251-20759270 | MS.gene057173:CDS | 50.0% | |
| GAGGAAAAAGAGGGTTGGAG+GGG | + | chr8.1:20758843-20758862 | MS.gene057173:CDS | 50.0% | |
| GAGTGTTCCTGTGGTAGACT+TGG | + | chr8.1:20758417-20758436 | MS.gene057173:CDS | 50.0% | |
| GCCAACATATGAATCACGGC+GGG | - | chr8.1:20758475-20758494 | None:intergenic | 50.0% | |
| GGATCTGCAGTGACAACTTC+TGG | + | chr8.1:20758142-20758161 | MS.gene057173:CDS | 50.0% | |
| GGTGCATCAACATCCACAAC+AGG | - | chr8.1:20757620-20757639 | None:intergenic | 50.0% | |
| GTTCGAAAGTTGGGGAACCA+AGG | + | chr8.1:20758516-20758535 | MS.gene057173:CDS | 50.0% | |
| TCCCTCTACCTGCTAATAGC+AGG | + | chr8.1:20759496-20759515 | MS.gene057173:CDS | 50.0% | |
| ! | CATGAACCCCACGGCTATTT+TGG | + | chr8.1:20759453-20759472 | MS.gene057173:CDS | 50.0% |
| ! | CTCATCCCAAGTTTGGCTTC+TGG | - | chr8.1:20757134-20757153 | None:intergenic | 50.0% |
| ! | GCAATAGCACTTGCACTGGT+TGG | - | chr8.1:20758070-20758089 | None:intergenic | 50.0% |
| ! | GGGGTGCCTGTAATCAAAAG+AGG | + | chr8.1:20758862-20758881 | MS.gene057173:CDS | 50.0% |
| ! | TTGGAGTGGATGGACTCCTA+GGG | - | chr8.1:20758051-20758070 | None:intergenic | 50.0% |
| !! | GACGATGATGGGAACCTTGA+AGG | + | chr8.1:20759393-20759412 | MS.gene057173:CDS | 50.0% |
| !! | GCGCCACCTCTTTTGATTAC+AGG | - | chr8.1:20758871-20758890 | None:intergenic | 50.0% |
| AAGGTCCGCATCCACAACTC+AGG | - | chr8.1:20759102-20759121 | None:intergenic | 55.0% | |
| ACAACTCAGGTCGTGACGCA+AGG | - | chr8.1:20759089-20759108 | None:intergenic | 55.0% | |
| AGGAGCCCAGAAGCCAAACT+TGG | + | chr8.1:20757125-20757144 | MS.gene057173:CDS | 55.0% | |
| AGTCTGAACCTCCATCCCCT+AGG | + | chr8.1:20758032-20758051 | MS.gene057173:intron | 55.0% | |
| CACGACCTGAGTTGTGGATG+CGG | + | chr8.1:20759094-20759113 | MS.gene057173:intron | 55.0% | |
| GAACTCGAAGCCTTAGGCCT+CGG | + | chr8.1:20758121-20758140 | MS.gene057173:CDS | 55.0% | |
| GCTATTGCAGCCGCAGCAAA+CGG | + | chr8.1:20758082-20758101 | MS.gene057173:CDS | 55.0% | |
| GCTCGAGAACTCGAAGCCTT+AGG | + | chr8.1:20758115-20758134 | MS.gene057173:CDS | 55.0% | |
| GGAGCCCAGAAGCCAAACTT+GGG | + | chr8.1:20757126-20757145 | MS.gene057173:CDS | 55.0% | |
| GGCTGCAATAGCACTTGCAC+TGG | - | chr8.1:20758074-20758093 | None:intergenic | 55.0% | |
| TTGCGTCACGACCTGAGTTG+TGG | + | chr8.1:20759088-20759107 | MS.gene057173:intron | 55.0% | |
| ! | AGTTTGGCTTCTGGGCTCCT+TGG | - | chr8.1:20757125-20757144 | None:intergenic | 55.0% |
| ! | GTTGGAGTGGATGGACTCCT+AGG | - | chr8.1:20758052-20758071 | None:intergenic | 55.0% |
| ! | TGGAGTGGATGGACTCCTAG+GGG | - | chr8.1:20758050-20758069 | None:intergenic | 55.0% |
| !! | AGCACTTGCACTGGTTGGAG+TGG | - | chr8.1:20758065-20758084 | None:intergenic | 55.0% |
| !! | CTTGCACTGGTTGGAGTGGA+TGG | - | chr8.1:20758061-20758080 | None:intergenic | 55.0% |
| CACTGCAGATCCGAGGCCTA+AGG | - | chr8.1:20758134-20758153 | None:intergenic | 60.0% | |
| CCAGCACCCAAGTCTACCAC+AGG | - | chr8.1:20758427-20758446 | None:intergenic | 60.0% | |
| CCTGTGGTAGACTTGGGTGC+TGG | + | chr8.1:20758424-20758443 | MS.gene057173:CDS | 60.0% | |
| GGCTGATGCGGCCTCAATCA+CGG | + | chr8.1:20759047-20759066 | MS.gene057173:intron | 60.0% | |
| ! | GATGGACTCCTAGGGGATGG+AGG | - | chr8.1:20758043-20758062 | None:intergenic | 60.0% |
| ! | GTGGATGGACTCCTAGGGGA+TGG | - | chr8.1:20758046-20758065 | None:intergenic | 60.0% |
| AGAGGTGGCGCCACGGCAGT+TGG | + | chr8.1:20758880-20758899 | MS.gene057173:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 20757095 | 20759524 | 20757095 | ID=MS.gene057173 |
| chr8.1 | mRNA | 20757095 | 20759524 | 20757095 | ID=MS.gene057173.t1;Parent=MS.gene057173 |
| chr8.1 | exon | 20757095 | 20757266 | 20757095 | ID=MS.gene057173.t1.exon1;Parent=MS.gene057173.t1 |
| chr8.1 | CDS | 20757095 | 20757266 | 20757095 | ID=cds.MS.gene057173.t1;Parent=MS.gene057173.t1 |
| chr8.1 | exon | 20757543 | 20757715 | 20757543 | ID=MS.gene057173.t1.exon2;Parent=MS.gene057173.t1 |
| chr8.1 | CDS | 20757543 | 20757715 | 20757543 | ID=cds.MS.gene057173.t1;Parent=MS.gene057173.t1 |
| chr8.1 | exon | 20758034 | 20758213 | 20758034 | ID=MS.gene057173.t1.exon3;Parent=MS.gene057173.t1 |
| chr8.1 | CDS | 20758034 | 20758213 | 20758034 | ID=cds.MS.gene057173.t1;Parent=MS.gene057173.t1 |
| chr8.1 | exon | 20758313 | 20758588 | 20758313 | ID=MS.gene057173.t1.exon4;Parent=MS.gene057173.t1 |
| chr8.1 | CDS | 20758313 | 20758588 | 20758313 | ID=cds.MS.gene057173.t1;Parent=MS.gene057173.t1 |
| chr8.1 | exon | 20758802 | 20758965 | 20758802 | ID=MS.gene057173.t1.exon5;Parent=MS.gene057173.t1 |
| chr8.1 | CDS | 20758802 | 20758965 | 20758802 | ID=cds.MS.gene057173.t1;Parent=MS.gene057173.t1 |
| chr8.1 | exon | 20759227 | 20759524 | 20759227 | ID=MS.gene057173.t1.exon6;Parent=MS.gene057173.t1 |
| chr8.1 | CDS | 20759227 | 20759524 | 20759227 | ID=cds.MS.gene057173.t1;Parent=MS.gene057173.t1 |
| Gene Sequence |
| Protein sequence |
