AlfalfaGEDB | MS.gene61881

M. sativa cultivar XinJiangDaYe / MS.gene61881

KEGG: -
GO: -
PFAM: PF03478.21

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61881.t1	RHN73858.1	60.3	380	120	10	7	371	6	369	2.70E-116	428.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61881.t1	Q3EBZ2	34.3	411	207	16	7	373	3	394	3.7e-45	183.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61881.t1	A0A396JBS2	60.3	380	120	10	7	371	6	369	2.0e-116	428.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049254	MS.gene61881	0.802184	6.33E-49	-1.69E-46
MS.gene049404	MS.gene61881	0.822154	2.76E-53	-1.69E-46
MS.gene050026	MS.gene61881	0.838546	2.70E-57	-1.69E-46
MS.gene051279	MS.gene61881	0.82686	2.15E-54	-1.69E-46
MS.gene052519	MS.gene61881	0.801854	7.40E-49	-1.69E-46
MS.gene052582	MS.gene61881	0.82141	4.10E-53	-1.69E-46
MS.gene052584	MS.gene61881	0.804717	1.89E-49	-1.69E-46
MS.gene05415	MS.gene61881	0.828509	8.64E-55	-1.69E-46
MS.gene054651	MS.gene61881	0.81468	1.36E-51	-1.69E-46
MS.gene055818	MS.gene61881	0.8229	1.85E-53	-1.69E-46
MS.gene056174	MS.gene61881	0.806881	6.63E-50	-1.69E-46
MS.gene056366	MS.gene61881	0.814004	1.92E-51	-1.69E-46
MS.gene057208	MS.gene61881	0.803822	2.90E-49	-1.69E-46
MS.gene057444	MS.gene61881	0.831071	2.05E-55	-1.69E-46
MS.gene058625	MS.gene61881	0.819126	1.37E-52	-1.69E-46
MS.gene058979	MS.gene61881	0.820261	7.53E-53	-1.69E-46
MS.gene059272	MS.gene61881	0.814731	1.33E-51	-1.69E-46
MS.gene060521	MS.gene61881	0.803598	3.23E-49	-1.69E-46
MS.gene060634	MS.gene61881	-0.806273	8.91E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61881.t1	MTR_2g047180	59.580	381	123	9	6	371	3	367	2.47e-145	416
MS.gene61881.t1	MTR_1g007260	61.640	378	122	12	1	365	16	383	3.97e-142	409
MS.gene61881.t1	MTR_1g026850	59.893	374	129	9	5	370	4	364	1.06e-134	389
MS.gene61881.t1	MTR_3g030080	53.708	391	147	8	1	373	1	375	4.55e-132	383
MS.gene61881.t1	MTR_6g018360	55.155	388	149	10	4	372	2	383	1.23e-127	373
MS.gene61881.t1	MTR_6g018390	56.842	380	130	13	6	369	4	365	3.83e-127	370
MS.gene61881.t1	MTR_3g029650	55.867	392	122	12	4	373	2	364	4.13e-122	370
MS.gene61881.t1	MTR_3g029650	49.246	398	161	15	2	371	367	751	2.54e-98	308
MS.gene61881.t1	MTR_6g027100	51.928	389	155	10	4	372	2	378	7.52e-122	359
MS.gene61881.t1	MTR_6g018315	55.319	376	139	10	18	372	1	368	2.83e-121	356
MS.gene61881.t1	MTR_6g027040	50.900	389	159	10	4	372	2	378	9.73e-119	349
MS.gene61881.t1	MTR_6g018400	51.823	384	146	12	6	369	4	368	1.15e-114	338
MS.gene61881.t1	MTR_3g029670	50.248	404	147	14	4	371	2	387	8.31e-108	322
MS.gene61881.t1	MTR_1g016570	50.392	383	140	14	2	371	16	361	1.48e-105	315
MS.gene61881.t1	MTR_3g030360	48.831	385	144	12	5	371	3	352	2.01e-105	314
MS.gene61881.t1	MTR_3g029750	49.257	404	151	14	4	371	2	387	2.86e-104	312
MS.gene61881.t1	MTR_3g029920	47.194	392	164	12	5	371	7	380	8.87e-104	311
MS.gene61881.t1	MTR_3g092000	49.052	422	142	17	1	371	1	400	1.86e-103	311
MS.gene61881.t1	MTR_3g030380	50.129	387	144	14	4	371	2	358	7.10e-103	308
MS.gene61881.t1	MTR_3g030440	49.610	385	144	15	3	369	2	354	3.36e-101	303
MS.gene61881.t1	MTR_3g030480	49.479	384	144	15	4	369	2	353	1.54e-100	302
MS.gene61881.t1	MTR_3g091990	46.437	407	162	14	1	371	1	387	1.46e-96	294
MS.gene61881.t1	MTR_3g030355	45.024	422	154	17	1	371	1	395	2.03e-91	280
MS.gene61881.t1	MTR_3g029620	45.013	391	172	15	6	371	2	374	8.83e-88	270
MS.gene61881.t1	MTR_3g029640	46.114	386	163	15	6	370	3	364	1.12e-87	269
MS.gene61881.t1	MTR_3g029840	47.632	380	162	17	4	371	2	356	1.89e-87	268
MS.gene61881.t1	MTR_1g049170	44.039	411	160	17	1	369	1	383	5.04e-87	268
MS.gene61881.t1	MTR_3g029800	44.503	382	169	15	6	371	3	357	6.20e-85	262
MS.gene61881.t1	MTR_3g030560	44.103	390	178	15	5	371	2	374	1.11e-84	262
MS.gene61881.t1	MTR_3g029950	45.524	391	166	16	4	371	2	368	4.95e-84	260
MS.gene61881.t1	MTR_3g030050	40.189	423	187	13	2	370	11	421	5.61e-84	261
MS.gene61881.t1	MTR_6g018370	50.000	314	96	10	5	313	2	259	3.99e-79	244
MS.gene61881.t1	MTR_7g005990	43.152	387	170	13	5	371	2	358	1.11e-74	236
MS.gene61881.t1	MTR_3g029820	42.455	391	128	16	7	371	9	328	7.72e-72	228
MS.gene61881.t1	MTR_3g029870	42.931	389	146	17	4	371	2	335	8.32e-72	228
MS.gene61881.t1	MTR_3g047980	43.850	374	157	15	7	370	30	360	1.37e-69	223
MS.gene61881.t1	MTR_3g058460	39.844	384	189	14	7	370	15	376	6.41e-67	216
MS.gene61881.t1	MTR_3g029900	44.795	317	139	13	67	370	165	458	4.32e-63	209
MS.gene61881.t1	MTR_1g007220	55.941	202	50	6	164	362	2	167	1.59e-56	182
MS.gene61881.t1	MTR_1g007250	65.089	169	47	6	197	362	1	160	5.09e-54	176
MS.gene61881.t1	MTR_5g042230	58.065	186	62	6	183	360	13	190	6.50e-53	174
MS.gene61881.t1	MTR_3g037710	42.412	257	118	9	130	372	25	265	3.78e-51	172
MS.gene61881.t1	MTR_1g016540	50.267	187	74	4	197	371	1	180	1.40e-46	157
MS.gene61881.t1	MTR_8g074610	28.354	395	229	15	6	369	24	395	1.23e-33	129
MS.gene61881.t1	MTR_5g078450	55.862	145	34	5	231	371	1	119	4.87e-33	120
MS.gene61881.t1	MTR_2g041510	29.000	400	204	16	5	363	4	364	7.65e-31	121
MS.gene61881.t1	MTR_2g041510	29.000	400	204	16	5	363	24	384	1.15e-30	120
MS.gene61881.t1	MTR_1g007200	68.132	91	29	0	277	367	16	106	1.93e-30	113
MS.gene61881.t1	MTR_1g007230	62.069	87	32	1	1	87	3	88	8.97e-29	107
MS.gene61881.t1	MTR_4g022880	41.860	172	77	5	208	370	15	172	1.58e-28	110
MS.gene61881.t1	MTR_8g074640	28.607	402	220	19	5	369	4	375	6.17e-27	110
MS.gene61881.t1	MTR_8g032080	49.505	101	40	3	123	216	3	99	1.35e-20	91.7
MS.gene61881.t1	MTR_6g009100	43.571	140	42	6	6	134	3	116	6.95e-20	84.7
MS.gene61881.t1	MTR_7g012990	46.341	123	49	2	141	263	48	153	1.08e-19	85.5
MS.gene61881.t1	MTR_8g035995	53.763	93	32	5	214	304	9	92	5.32e-18	80.5
MS.gene61881.t1	MTR_6g075925	77.273	44	10	0	4	47	2	45	3.66e-17	76.3
MS.gene61881.t1	MTR_6g092570	23.894	339	221	10	1	327	2	315	4.96e-16	79.0
MS.gene61881.t1	MTR_6g009620	45.977	87	41	3	93	173	38	124	1.61e-14	70.1
MS.gene61881.t1	MTR_6g076200	76.596	47	11	0	4	50	2	48	1.54e-12	62.4
MS.gene61881.t1	MTR_6g018420	69.444	36	11	0	4	39	2	37	3.35e-12	62.4

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene61881.t1	AT2G17030	34.223	412	208	16	6	373	2	394	5.67e-52	178
MS.gene61881.t1	AT2G17036	32.653	392	227	16	7	370	2	384	2.49e-47	166
MS.gene61881.t1	AT2G17036	32.653	392	227	16	7	370	3	385	2.71e-47	166
MS.gene61881.t1	AT5G60060	29.042	334	205	13	6	320	9	329	2.39e-24	103
MS.gene61881.t1	AT5G24040	25.654	382	248	11	8	369	4	369	1.66e-22	97.8
MS.gene61881.t1	AT2G26160	25.779	353	201	14	7	333	5	322	2.65e-17	82.4
MS.gene61881.t1	AT1G65770	26.111	360	242	15	6	356	2	346	2.46e-16	80.1
MS.gene61881.t1	AT3G25750	25.474	369	222	14	5	350	3	341	6.31e-15	75.9

Find 98 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTTAGAATATTCAGGATATT+TGG	0.162233	3.1:-22025694	None:intergenic
TCTTGCAAGTATTAATTTCT+TGG	0.210109	3.1:+22025443	MS.gene61881:CDS
CATAACAATTTAGAATATTC+AGG	0.267633	3.1:-22025702	None:intergenic
GGGTGAAGTTGGCGAATTTA+GGG	0.273559	3.1:+22025508	MS.gene61881:CDS
TTTCAATGGGTCGCCTTATC+TGG	0.284858	3.1:+22025254	MS.gene61881:CDS
AAAATGTTACAACGGTGATT+TGG	0.286056	3.1:-22024769	None:intergenic
GTGGCTGAACCTTTGGTTGA+TGG	0.316763	3.1:+22025333	MS.gene61881:CDS
AATGGTTTGGGTGGGAGATA+TGG	0.322797	3.1:-22024967	None:intergenic
TGGGTGAAGTTGGCGAATTT+AGG	0.324049	3.1:+22025507	MS.gene61881:CDS
AGGGAATTGTGTGATCATTA+TGG	0.329701	3.1:+22025605	MS.gene61881:CDS
TTCGATCAATTTGTTCCAAT+TGG	0.330753	3.1:+22024731	MS.gene61881:CDS
AAATGTTACAACGGTGATTT+GGG	0.340210	3.1:-22024768	None:intergenic
CTGAATATTCTAAATTGTTA+TGG	0.344183	3.1:+22025703	MS.gene61881:CDS
CAGATTCTCCCTCCTTCATT+TGG	0.350995	3.1:+22025017	MS.gene61881:CDS
CCAGTTAGTGGCTGAACCTT+TGG	0.355761	3.1:+22025326	MS.gene61881:CDS
TCCTGACATGTCGCCTTGCT+CGG	0.359645	3.1:+22025218	MS.gene61881:CDS
CCAAAGGTTCAGCCACTAAC+TGG	0.369613	3.1:-22025326	None:intergenic
AGCACAGGATTGAAAGGAAA+TGG	0.373099	3.1:-22024985	None:intergenic
ATCTGAGTAGTGGGTACTCC+AGG	0.374805	3.1:-22024795	None:intergenic
CAGATTTGTGTGTTGCTAAA+GGG	0.387719	3.1:+22025586	MS.gene61881:CDS
GGAGAAGAAGTGGGTGAAGT+TGG	0.400739	3.1:+22025497	MS.gene61881:CDS
GATAATATATCCACTTTATG+TGG	0.411499	3.1:+22025627	MS.gene61881:CDS
TGTGTTTAAGCTTAATGAAA+AGG	0.411651	3.1:+22025476	MS.gene61881:CDS
CCTTATCTGGTAGACAAAAC+TGG	0.412169	3.1:+22025267	MS.gene61881:CDS
AGGATTGAAAGGAAATGGTT+TGG	0.416366	3.1:-22024980	None:intergenic
GGATTGAAAGGAAATGGTTT+GGG	0.419911	3.1:-22024979	None:intergenic
GATGAGGAAGAAACTGTGTT+TGG	0.423904	3.1:-22024869	None:intergenic
CTAAGTGTGCCGAGTATGAT+AGG	0.423924	3.1:-22025135	None:intergenic
TGAAATGCGGCGATGAGAAT+TGG	0.427942	3.1:+22025187	MS.gene61881:CDS
TGGCGGGAAAAGAAAATTCT+TGG	0.433576	3.1:+22025356	MS.gene61881:CDS
CACCACCACATCACCGTCCT+TGG	0.453085	3.1:+22024896	MS.gene61881:CDS
GAATGAAGTATTGTTGTTGA+GGG	0.456327	3.1:-22024836	None:intergenic
CCCGAGCAAGGCGACATGTC+AGG	0.457783	3.1:-22025219	None:intergenic
GAACCTTTGGTTGATGGTGG+CGG	0.460372	3.1:+22025339	MS.gene61881:CDS
TCGCCGCATTTCAACAGTAC+TGG	0.461047	3.1:-22025177	None:intergenic
AAAACAGCTCCCACATAAAG+TGG	0.468733	3.1:-22025637	None:intergenic
GAGATATGGATGTAAGAGTT+GGG	0.470914	3.1:-22024953	None:intergenic
CCTGACATGTCGCCTTGCTC+GGG	0.472811	3.1:+22025219	MS.gene61881:CDS
CAAGTATTAATTTCTTGGTA+CGG	0.473932	3.1:+22025448	MS.gene61881:CDS
GTCTGCCTCTGCCGTCGCCA+TGG	0.477104	3.1:-22024635	None:intergenic
TTGGCGATCCACTCTGGAGG+TGG	0.481012	3.1:-22025726	None:intergenic
ATCAGATGAAGAAGATCCTT+CGG	0.489571	3.1:-22024670	None:intergenic
TCGAATGGGTATCTGAGTAG+TGG	0.491826	3.1:-22024805	None:intergenic
AACCTTTGGTTGATGGTGGC+GGG	0.492093	3.1:+22025340	MS.gene61881:CDS
TGGCGACGGCAGAGGCAGAC+TGG	0.501612	3.1:+22024638	MS.gene61881:CDS
CGACTCCACTGTCCAGTTAG+TGG	0.503077	3.1:+22025314	MS.gene61881:CDS
AGAATGAAGTATTGTTGTTG+AGG	0.504807	3.1:-22024837	None:intergenic
GATTGAGGAAGAGCGCCAAT+TGG	0.508882	3.1:-22024746	None:intergenic
TCAGATTTGTGTGTTGCTAA+AGG	0.511112	3.1:+22025585	MS.gene61881:CDS
GGAGATATGGATGTAAGAGT+TGG	0.511354	3.1:-22024954	None:intergenic
TATGAGTCTTTAGAGTTCGA+TGG	0.511537	3.1:+22025414	MS.gene61881:CDS
TTCATCCATGGCGACGGCAG+AGG	0.512568	3.1:+22024630	None:intergenic
AAAATTCTTGGTGGAGAGTG+AGG	0.513659	3.1:+22025368	MS.gene61881:CDS
TGAGGGAATCAATTTCGAAT+GGG	0.514429	3.1:-22024819	None:intergenic
AACTGGACAGTGGAGTCGTC+CGG	0.520658	3.1:-22025309	None:intergenic
TTGAGGGAATCAATTTCGAA+TGG	0.524973	3.1:-22024820	None:intergenic
ACAACGGTGATTTGGGATTG+AGG	0.530478	3.1:-22024761	None:intergenic
TGAAGTTAGTTACCAAATGA+AGG	0.536638	3.1:-22025029	None:intergenic
TCATCTGATATCACAACGAA+TGG	0.553104	3.1:+22024684	MS.gene61881:CDS
GATAAGGCGACCCATTGAAA+AGG	0.555789	3.1:-22025251	None:intergenic
TGAAAGGAAATGGTTTGGGT+GGG	0.556704	3.1:-22024975	None:intergenic
TTGAAAGGAAATGGTTTGGG+TGG	0.559535	3.1:-22024976	None:intergenic
TTAATGAAAAGGAGAAGAAG+TGG	0.562031	3.1:+22025487	MS.gene61881:CDS
GTACATTTCGGTATAGTGCA+AGG	0.562073	3.1:-22025073	None:intergenic
AATCTGTTAAAATTGAGCAC+AGG	0.563896	3.1:-22025000	None:intergenic
AAATTGAGCACAGGATTGAA+AGG	0.564433	3.1:-22024991	None:intergenic
CGAATGGGTATCTGAGTAGT+GGG	0.565433	3.1:-22024804	None:intergenic
CGGGAAAAGAAAATTCTTGG+TGG	0.567651	3.1:+22025359	MS.gene61881:CDS
TTCCCGCCACCATCAACCAA+AGG	0.571866	3.1:-22025342	None:intergenic
TACATTTCGGTATAGTGCAA+GGG	0.578026	3.1:-22025072	None:intergenic
AGGCAGATGTCTCCCGAGCA+AGG	0.579393	3.1:-22025231	None:intergenic
CAAGGACGGTGATGTGGTGG+TGG	0.579849	3.1:-22024895	None:intergenic
AAATTCTTGGTGGAGAGTGA+GGG	0.579999	3.1:+22025369	MS.gene61881:CDS
TAATGAAAAGGAGAAGAAGT+GGG	0.584827	3.1:+22025488	MS.gene61881:CDS
ATAATATATCCACTTTATGT+GGG	0.595924	3.1:+22025628	MS.gene61881:CDS
GGAAGAAACTGTGTTTGGAA+AGG	0.598979	3.1:-22024864	None:intergenic
AACAGCTTCATCCATGGCGA+CGG	0.608016	3.1:+22024624	None:intergenic
GGTGAAGTTGGCGAATTTAG+GGG	0.608400	3.1:+22025509	MS.gene61881:CDS
AGAATTACCCAAAATTCTAG+TGG	0.610467	3.1:+22024925	MS.gene61881:CDS
GATGTGGTGGTGGTTTGATG+AGG	0.614582	3.1:-22024885	None:intergenic
AGTTAGTTACCAAATGAAGG+AGG	0.618591	3.1:-22025026	None:intergenic
TGGGTAATTCTGATCAACCA+AGG	0.622582	3.1:-22024913	None:intergenic
AGACTGGTCTCAACTGCCGA+AGG	0.625064	3.1:+22024654	MS.gene61881:CDS
GTTAGTTACCAAATGAAGGA+GGG	0.627616	3.1:-22025025	None:intergenic
TGAGGGTGAGTTATTGCTAA+CGG	0.631275	3.1:+22025386	MS.gene61881:CDS
GCTGAACCTTTGGTTGATGG+TGG	0.633853	3.1:+22025336	MS.gene61881:CDS
TAATTCTGATCAACCAAGGA+CGG	0.636208	3.1:-22024909	None:intergenic
ACGGACGGTTACTGTTAGAC+CGG	0.638236	3.1:+22025290	MS.gene61881:CDS
GGTAGACAAAACTGGACGGA+CGG	0.641749	3.1:+22025275	MS.gene61881:CDS
TCTGAGTAGTGGGTACTCCA+GGG	0.642884	3.1:-22024794	None:intergenic
ATGCGGCGATGAGAATTGGA+AGG	0.644801	3.1:+22025191	MS.gene61881:CDS
ATCTGGTAGACAAAACTGGA+CGG	0.647904	3.1:+22025271	MS.gene61881:CDS
ATCAACCAAGGACGGTGATG+TGG	0.648742	3.1:-22024901	None:intergenic
AACCAAGGACGGTGATGTGG+TGG	0.657912	3.1:-22024898	None:intergenic
TGTTATGGCCACCTCCAGAG+TGG	0.665853	3.1:+22025718	MS.gene61881:CDS
TTCAGCCACTAACTGGACAG+TGG	0.686028	3.1:-22025319	None:intergenic
CCAGGGTTAAAATGTTACAA+CGG	0.704032	3.1:-22024777	None:intergenic
AAACCAGTACTGTTGAAATG+CGG	0.710188	3.1:+22025174	MS.gene61881:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAATATATCCACTTTATGT+GGG	+	chr3.1:22025628-22025647	MS.gene61881:CDS	20.0%
!!	CTGAATATTCTAAATTGTTA+TGG	+	chr3.1:22025703-22025722	MS.gene61881:CDS	20.0%
!!!	CATAACAATTTAGAATATTC+AGG	-	chr3.1:22025705-22025724	None:intergenic	20.0%
!!!	TTTAGAATATTCAGGATATT+TGG	-	chr3.1:22025697-22025716	None:intergenic	20.0%
!	CAAGTATTAATTTCTTGGTA+CGG	+	chr3.1:22025448-22025467	MS.gene61881:CDS	25.0%
!	GATAATATATCCACTTTATG+TGG	+	chr3.1:22025627-22025646	MS.gene61881:CDS	25.0%
!	TCTTGCAAGTATTAATTTCT+TGG	+	chr3.1:22025443-22025462	MS.gene61881:CDS	25.0%
!	TGTGTTTAAGCTTAATGAAA+AGG	+	chr3.1:22025476-22025495	MS.gene61881:CDS	25.0%
	AAAATGTTACAACGGTGATT+TGG	-	chr3.1:22024772-22024791	None:intergenic	30.0%
	AAATGTTACAACGGTGATTT+GGG	-	chr3.1:22024771-22024790	None:intergenic	30.0%
	AATCTGTTAAAATTGAGCAC+AGG	-	chr3.1:22025003-22025022	None:intergenic	30.0%
	AGAATTACCCAAAATTCTAG+TGG	+	chr3.1:22024925-22024944	MS.gene61881:CDS	30.0%
	GACAAAAAACCTATCATACT+CGG	+	chr3.1:22025126-22025145	MS.gene61881:CDS	30.0%
	TAATGAAAAGGAGAAGAAGT+GGG	+	chr3.1:22025488-22025507	MS.gene61881:CDS	30.0%
	TGAAGTTAGTTACCAAATGA+AGG	-	chr3.1:22025032-22025051	None:intergenic	30.0%
	TTAATGAAAAGGAGAAGAAG+TGG	+	chr3.1:22025487-22025506	MS.gene61881:CDS	30.0%
!	TTCGATCAATTTGTTCCAAT+TGG	+	chr3.1:22024731-22024750	MS.gene61881:CDS	30.0%
!!	AGAATGAAGTATTGTTGTTG+AGG	-	chr3.1:22024840-22024859	None:intergenic	30.0%
!!	GAATGAAGTATTGTTGTTGA+GGG	-	chr3.1:22024839-22024858	None:intergenic	30.0%
	AAACCAGTACTGTTGAAATG+CGG	+	chr3.1:22025174-22025193	MS.gene61881:CDS	35.0%
	AAATTGAGCACAGGATTGAA+AGG	-	chr3.1:22024994-22025013	None:intergenic	35.0%
	AGGATTGAAAGGAAATGGTT+TGG	-	chr3.1:22024983-22025002	None:intergenic	35.0%
	AGGGAATTGTGTGATCATTA+TGG	+	chr3.1:22025605-22025624	MS.gene61881:CDS	35.0%
	AGTTAGTTACCAAATGAAGG+AGG	-	chr3.1:22025029-22025048	None:intergenic	35.0%
	ATCAGATGAAGAAGATCCTT+CGG	-	chr3.1:22024673-22024692	None:intergenic	35.0%
	CCAGGGTTAAAATGTTACAA+CGG	-	chr3.1:22024780-22024799	None:intergenic	35.0%
	GAGATATGGATGTAAGAGTT+GGG	-	chr3.1:22024956-22024975	None:intergenic	35.0%
	GGATTGAAAGGAAATGGTTT+GGG	-	chr3.1:22024982-22025001	None:intergenic	35.0%
	GTTAGTTACCAAATGAAGGA+GGG	-	chr3.1:22025028-22025047	None:intergenic	35.0%
	TAATTCTGATCAACCAAGGA+CGG	-	chr3.1:22024912-22024931	None:intergenic	35.0%
	TACATTTCGGTATAGTGCAA+GGG	-	chr3.1:22025075-22025094	None:intergenic	35.0%
	TCATCTGATATCACAACGAA+TGG	+	chr3.1:22024684-22024703	MS.gene61881:CDS	35.0%
	TGAGGGAATCAATTTCGAAT+GGG	-	chr3.1:22024822-22024841	None:intergenic	35.0%
	TTGAGGGAATCAATTTCGAA+TGG	-	chr3.1:22024823-22024842	None:intergenic	35.0%
!	CAGATTTGTGTGTTGCTAAA+GGG	+	chr3.1:22025586-22025605	MS.gene61881:CDS	35.0%
!	GGTTTTGCCACTAGAATTTT+GGG	-	chr3.1:22024935-22024954	None:intergenic	35.0%
!	TCAGATTTGTGTGTTGCTAA+AGG	+	chr3.1:22025585-22025604	MS.gene61881:CDS	35.0%
!!	TATGAGTCTTTAGAGTTCGA+TGG	+	chr3.1:22025414-22025433	MS.gene61881:CDS	35.0%
!!!	AGGGGATAGAGTTTTGTTTT+TGG	+	chr3.1:22025527-22025546	MS.gene61881:CDS	35.0%
!!!	GACTTTTTCAGGGTACATTT+CGG	-	chr3.1:22025088-22025107	None:intergenic	35.0%
!!!	GGGGATAGAGTTTTGTTTTT+GGG	+	chr3.1:22025528-22025547	MS.gene61881:CDS	35.0%
!!!	TGTTTTTTGGACTTGGATGA+TGG	+	chr3.1:22025654-22025673	MS.gene61881:CDS	35.0%
!!!	TTTATGTGGGAGCTGTTTTT+TGG	+	chr3.1:22025641-22025660	MS.gene61881:CDS	35.0%
!!!	TTTCAACAGTACTGGTTTTG+AGG	-	chr3.1:22025172-22025191	None:intergenic	35.0%
	AAAACAGCTCCCACATAAAG+TGG	-	chr3.1:22025640-22025659	None:intergenic	40.0%
	AAAATTCTTGGTGGAGAGTG+AGG	+	chr3.1:22025368-22025387	MS.gene61881:CDS	40.0%
	AAATTCTTGGTGGAGAGTGA+GGG	+	chr3.1:22025369-22025388	MS.gene61881:CDS	40.0%
	AATGTACCCTGAAAAAGTCG+TGG	+	chr3.1:22025089-22025108	MS.gene61881:CDS	40.0%
	AGCACAGGATTGAAAGGAAA+TGG	-	chr3.1:22024988-22025007	None:intergenic	40.0%
	ATCTGGTAGACAAAACTGGA+CGG	+	chr3.1:22025271-22025290	MS.gene61881:CDS	40.0%
	CCTTATCTGGTAGACAAAAC+TGG	+	chr3.1:22025267-22025286	MS.gene61881:CDS	40.0%
	CGGGAAAAGAAAATTCTTGG+TGG	+	chr3.1:22025359-22025378	MS.gene61881:CDS	40.0%
	GATGAGGAAGAAACTGTGTT+TGG	-	chr3.1:22024872-22024891	None:intergenic	40.0%
	GGAAGAAACTGTGTTTGGAA+AGG	-	chr3.1:22024867-22024886	None:intergenic	40.0%
	GGAGATATGGATGTAAGAGT+TGG	-	chr3.1:22024957-22024976	None:intergenic	40.0%
	GTACATTTCGGTATAGTGCA+AGG	-	chr3.1:22025076-22025095	None:intergenic	40.0%
	TGAGGGTGAGTTATTGCTAA+CGG	+	chr3.1:22025386-22025405	MS.gene61881:CDS	40.0%
	TGGCGGGAAAAGAAAATTCT+TGG	+	chr3.1:22025356-22025375	MS.gene61881:CDS	40.0%
	TGGGTAATTCTGATCAACCA+AGG	-	chr3.1:22024916-22024935	None:intergenic	40.0%
!	GAGACATCTGCCTTTTCAAT+GGG	+	chr3.1:22025241-22025260	MS.gene61881:CDS	40.0%
!	GGGTTTTGCCACTAGAATTT+TGG	-	chr3.1:22024936-22024955	None:intergenic	40.0%
!	TGAAAGGAAATGGTTTGGGT+GGG	-	chr3.1:22024978-22024997	None:intergenic	40.0%
!	TTGAAAGGAAATGGTTTGGG+TGG	-	chr3.1:22024979-22024998	None:intergenic	40.0%
!!	CCAGTTTTGTCTACCAGATA+AGG	-	chr3.1:22025270-22025289	None:intergenic	40.0%
!!	CCGTTGTAACATTTTAACCC+TGG	+	chr3.1:22024777-22024796	MS.gene61881:CDS	40.0%
!!!	ACAGTACTGGTTTTGAGGTA+CGG	-	chr3.1:22025167-22025186	None:intergenic	40.0%
!!!	GTGCAAGGGTTCTTTTTTGT+CGG	-	chr3.1:22025061-22025080	None:intergenic	40.0%
!!!	TGCAAGGGTTCTTTTTTGTC+GGG	-	chr3.1:22025060-22025079	None:intergenic	40.0%
	CAGATTCTCCCTCCTTCATT+TGG	+	chr3.1:22025017-22025036	MS.gene61881:CDS	45.0%
	CGAATGGGTATCTGAGTAGT+GGG	-	chr3.1:22024807-22024826	None:intergenic	45.0%
	CTAAGTGTGCCGAGTATGAT+AGG	-	chr3.1:22025138-22025157	None:intergenic	45.0%
	GATAAGGCGACCCATTGAAA+AGG	-	chr3.1:22025254-22025273	None:intergenic	45.0%
	GGGTGAAGTTGGCGAATTTA+GGG	+	chr3.1:22025508-22025527	MS.gene61881:CDS	45.0%
	GGTGAAGTTGGCGAATTTAG+GGG	+	chr3.1:22025509-22025528	MS.gene61881:CDS	45.0%
	TCGAATGGGTATCTGAGTAG+TGG	-	chr3.1:22024808-22024827	None:intergenic	45.0%
	TGAAATGCGGCGATGAGAAT+TGG	+	chr3.1:22025187-22025206	MS.gene61881:CDS	45.0%
	TGGGTGAAGTTGGCGAATTT+AGG	+	chr3.1:22025507-22025526	MS.gene61881:CDS	45.0%
	TTTCAATGGGTCGCCTTATC+TGG	+	chr3.1:22025254-22025273	MS.gene61881:CDS	45.0%
!	AATGGTTTGGGTGGGAGATA+TGG	-	chr3.1:22024970-22024989	None:intergenic	45.0%
!	ACAACGGTGATTTGGGATTG+AGG	-	chr3.1:22024764-22024783	None:intergenic	45.0%
!	GGAGACATCTGCCTTTTCAA+TGG	+	chr3.1:22025240-22025259	MS.gene61881:CDS	45.0%
!!!	TGACAGCCACGACTTTTTCA+GGG	-	chr3.1:22025098-22025117	None:intergenic	45.0%
!!!	TGGGAGCTGTTTTTTGGACT+TGG	+	chr3.1:22025647-22025666	MS.gene61881:CDS	45.0%
	ACGGACGGTTACTGTTAGAC+CGG	+	chr3.1:22025290-22025309	MS.gene61881:CDS	50.0%
	ATCAACCAAGGACGGTGATG+TGG	-	chr3.1:22024904-22024923	None:intergenic	50.0%
	ATGCGGCGATGAGAATTGGA+AGG	+	chr3.1:22025191-22025210	MS.gene61881:CDS	50.0%
	CCAAAGGTTCAGCCACTAAC+TGG	-	chr3.1:22025329-22025348	None:intergenic	50.0%
	CCAGTTAGTGGCTGAACCTT+TGG	+	chr3.1:22025326-22025345	MS.gene61881:CDS	50.0%
	GGAGAAGAAGTGGGTGAAGT+TGG	+	chr3.1:22025497-22025516	MS.gene61881:CDS	50.0%
	GGTAGACAAAACTGGACGGA+CGG	+	chr3.1:22025275-22025294	MS.gene61881:CDS	50.0%
	GTGGCTGAACCTTTGGTTGA+TGG	+	chr3.1:22025333-22025352	MS.gene61881:CDS	50.0%
	TCGCCGCATTTCAACAGTAC+TGG	-	chr3.1:22025180-22025199	None:intergenic	50.0%
	TTCAGCCACTAACTGGACAG+TGG	-	chr3.1:22025322-22025341	None:intergenic	50.0%
!	CTTCTTTTGGCGATCCACTC+TGG	-	chr3.1:22025735-22025754	None:intergenic	50.0%
!!	AACCTTTGGTTGATGGTGGC+GGG	+	chr3.1:22025340-22025359	MS.gene61881:CDS	50.0%
!!	ATCTGAGTAGTGGGTACTCC+AGG	-	chr3.1:22024798-22024817	None:intergenic	50.0%
!!	GAACCTTTGGTTGATGGTGG+CGG	+	chr3.1:22025339-22025358	MS.gene61881:CDS	50.0%
!!	GATGTGGTGGTGGTTTGATG+AGG	-	chr3.1:22024888-22024907	None:intergenic	50.0%
!!	GATTGAGGAAGAGCGCCAAT+TGG	-	chr3.1:22024749-22024768	None:intergenic	50.0%
!!	GCTGAACCTTTGGTTGATGG+TGG	+	chr3.1:22025336-22025355	MS.gene61881:CDS	50.0%
!!	GTGACAGCCACGACTTTTTC+AGG	-	chr3.1:22025099-22025118	None:intergenic	50.0%
!!	TCTGAGTAGTGGGTACTCCA+GGG	-	chr3.1:22024797-22024816	None:intergenic	50.0%
	AACCAAGGACGGTGATGTGG+TGG	-	chr3.1:22024901-22024920	None:intergenic	55.0%
	AACTGGACAGTGGAGTCGTC+CGG	-	chr3.1:22025312-22025331	None:intergenic	55.0%
	CGACTCCACTGTCCAGTTAG+TGG	+	chr3.1:22025314-22025333	MS.gene61881:CDS	55.0%
	TCCTGACATGTCGCCTTGCT+CGG	+	chr3.1:22025218-22025237	MS.gene61881:CDS	55.0%
	TGTTATGGCCACCTCCAGAG+TGG	+	chr3.1:22025718-22025737	MS.gene61881:CDS	55.0%
	TTCCCGCCACCATCAACCAA+AGG	-	chr3.1:22025345-22025364	None:intergenic	55.0%
!	CTTTTGGCGATCCACTCTGG+AGG	-	chr3.1:22025732-22025751	None:intergenic	55.0%
!!	AGACTGGTCTCAACTGCCGA+AGG	+	chr3.1:22024654-22024673	MS.gene61881:CDS	55.0%
	AGGCAGATGTCTCCCGAGCA+AGG	-	chr3.1:22025234-22025253	None:intergenic	60.0%
	CAAGGACGGTGATGTGGTGG+TGG	-	chr3.1:22024898-22024917	None:intergenic	60.0%
	CACCACCACATCACCGTCCT+TGG	+	chr3.1:22024896-22024915	MS.gene61881:CDS	60.0%
	CCTGACATGTCGCCTTGCTC+GGG	+	chr3.1:22025219-22025238	MS.gene61881:CDS	60.0%
!	TTGGCGATCCACTCTGGAGG+TGG	-	chr3.1:22025729-22025748	None:intergenic	60.0%
	CCCGAGCAAGGCGACATGTC+AGG	-	chr3.1:22025222-22025241	None:intergenic	65.0%
	TGGCGACGGCAGAGGCAGAC+TGG	+	chr3.1:22024638-22024657	MS.gene61881:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.1	gene	22024637	22025758	22024637	ID=MS.gene61881
chr3.1	mRNA	22024637	22025758	22024637	ID=MS.gene61881.t1;Parent=MS.gene61881
chr3.1	exon	22024637	22025758	22024637	ID=MS.gene61881.t1.exon1;Parent=MS.gene61881.t1
chr3.1	CDS	22024637	22025758	22024637	ID=cds.MS.gene61881.t1;Parent=MS.gene61881.t1

Gene Sequence

>MS.gene61881

ATGGCGACGGCAGAGGCAGACTGGTCTCAACTGCCGAAGGATCTTCTTCATCTGATATCACAACGAATGGACAACGAAATCGATCTTATTCGTTTTCGATCAATTTGTTCCAATTGGCGCTCTTCCTCAATCCCAAATCACCGTTGTAACATTTTAACCCTGGAGTACCCACTACTCAGATACCCATTCGAAATTGATTCCCTCAACAACAATACTTCATTCTCTTACCTTTCCAAACACAGTTTCTTCCTCATCAAACCACCACCACATCACCGTCCTTGGTTGATCAGAATTACCCAAAATTCTAGTGGCAAAACCCAACTCTTACATCCATATCTCCCACCCAAACCATTTCCTTTCAATCCTGTGCTCAATTTTAACAGATTCTCCCTCCTTCATTTGGTAACTAACTTCATCATTCCCGACAAAAAAGAACCCTTGCACTATACCGAAATGTACCCTGAAAAAGTCGTGGCTGTCACGTGTCATGACAAAAAACCTATCATACTCGGCACACTTAGCTTTAGCCGTACCTCAAAACCAGTACTGTTGAAATGCGGCGATGAGAATTGGAAGGCTATTCCTGACATGTCGCCTTGCTCGGGAGACATCTGCCTTTTCAATGGGTCGCCTTATCTGGTAGACAAAACTGGACGGACGGTTACTGTTAGACCGGACGACTCCACTGTCCAGTTAGTGGCTGAACCTTTGGTTGATGGTGGCGGGAAAAGAAAATTCTTGGTGGAGAGTGAGGGTGAGTTATTGCTAACGGACTTTTATGAGTCTTTAGAGTTCGATGGTGATGATCTTGCAAGTATTAATTTCTTGGTACGGATTCATGTGTTTAAGCTTAATGAAAAGGAGAAGAAGTGGGTGAAGTTGGCGAATTTAGGGGATAGAGTTTTGTTTTTGGGATCGCTGTGTTCATTCTCTGCTTCTGCTTCTGCTTCAGATTTGTGTGTTGCTAAAGGGAATTGTGTGATCATTATGGATAATATATCCACTTTATGTGGGAGCTGTTTTTTGGACTTGGATGATGGTCAGCTTTCGCTTTTATCCAAATATCCTGAATATTCTAAATTGTTATGGCCACCTCCAGAGTGGATCGCCAAAAGAAGCTGA

Protein sequence

>MS.gene61881.t1

MATAEADWSQLPKDLLHLISQRMDNEIDLIRFRSICSNWRSSSIPNHRCNILTLEYPLLRYPFEIDSLNNNTSFSYLSKHSFFLIKPPPHHRPWLIRITQNSSGKTQLLHPYLPPKPFPFNPVLNFNRFSLLHLVTNFIIPDKKEPLHYTEMYPEKVVAVTCHDKKPIILGTLSFSRTSKPVLLKCGDENWKAIPDMSPCSGDICLFNGSPYLVDKTGRTVTVRPDDSTVQLVAEPLVDGGGKRKFLVESEGELLLTDFYESLEFDGDDLASINFLVRIHVFKLNEKEKKWVKLANLGDRVLFLGSLCSFSASASASDLCVAKGNCVIIMDNISTLCGSCFLDLDDGQLSLLSKYPEYSKLLWPPPEWIAKRS