Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62388.t1 | XP_013451516.1 | 90.9 | 241 | 22 | 0 | 1 | 241 | 384 | 624 | 1.50E-94 | 355.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62388.t1 | A0A072U701 | 90.9 | 241 | 22 | 0 | 1 | 241 | 384 | 624 | 1.1e-94 | 355.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051003 | MS.gene62388 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene051746 | MS.gene62388 | 0.808979 | 2.37E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene62388 | 0.811783 | 5.89E-51 | -1.69E-46 |
| MS.gene052947 | MS.gene62388 | 0.809642 | 1.71E-50 | -1.69E-46 |
| MS.gene053381 | MS.gene62388 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene053677 | MS.gene62388 | 0.811214 | 7.83E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene62388 | 0.800484 | 1.41E-48 | -1.69E-46 |
| MS.gene055555 | MS.gene62388 | 0.804443 | 2.16E-49 | -1.69E-46 |
| MS.gene057057 | MS.gene62388 | 0.802751 | 4.84E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene62388 | 0.812881 | 3.39E-51 | -1.69E-46 |
| MS.gene057234 | MS.gene62388 | 0.805892 | 1.07E-49 | -1.69E-46 |
| MS.gene058654 | MS.gene62388 | 0.808304 | 3.31E-50 | -1.69E-46 |
| MS.gene058906 | MS.gene62388 | 0.806554 | 7.77E-50 | -1.69E-46 |
| MS.gene06011 | MS.gene62388 | 0.834713 | 2.56E-56 | -1.69E-46 |
| MS.gene060586 | MS.gene62388 | 0.810945 | 8.95E-51 | -1.69E-46 |
| MS.gene060763 | MS.gene62388 | 0.823559 | 1.30E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62388.t1 | MTR_6g027510 | 94.606 | 241 | 13 | 0 | 1 | 241 | 327 | 567 | 1.92e-148 | 426 |
| MS.gene62388.t1 | MTR_6g027510 | 94.606 | 241 | 13 | 0 | 1 | 241 | 384 | 624 | 4.68e-148 | 427 |
| MS.gene62388.t1 | MTR_7g086730 | 50.000 | 206 | 87 | 8 | 42 | 239 | 378 | 575 | 4.74e-37 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62388.t1 | AT3G09360 | 49.664 | 149 | 72 | 2 | 48 | 196 | 392 | 537 | 2.34e-22 | 95.9 |
| MS.gene62388.t1 | AT3G09360 | 49.664 | 149 | 72 | 2 | 48 | 196 | 392 | 537 | 2.34e-22 | 95.9 |
| MS.gene62388.t1 | AT3G09360 | 50.725 | 138 | 65 | 2 | 48 | 185 | 392 | 526 | 4.28e-21 | 92.0 |
| MS.gene62388.t1 | AT2G45100 | 39.286 | 140 | 69 | 4 | 43 | 181 | 357 | 481 | 4.94e-11 | 62.4 |
| MS.gene62388.t1 | AT2G45100 | 39.286 | 140 | 69 | 4 | 43 | 181 | 357 | 481 | 4.94e-11 | 62.4 |
| MS.gene62388.t1 | AT2G45100 | 39.286 | 140 | 69 | 4 | 43 | 181 | 357 | 481 | 4.94e-11 | 62.4 |
Find 49 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATTCCAAAGTTACCTTTC+TGG | 0.169602 | 6.4:+2287973 | None:intergenic |
| TCTCTTGCTGCACGCTCTTC+AGG | 0.178853 | 6.4:+2288031 | None:intergenic |
| GGAACCAGTCAACGAATTTC+CGG | 0.273578 | 6.4:-2285605 | MS.gene62388:CDS |
| TCCTCTGAGCCTGAAAATAT+TGG | 0.290266 | 6.4:-2289718 | MS.gene62388:intron |
| CAGAGGAAAGTAACTCTATT+TGG | 0.297589 | 6.4:+2289734 | None:intergenic |
| ACTCAGCTCCAAAGTCAATT+TGG | 0.316806 | 6.4:-2286372 | MS.gene62388:CDS |
| TGAAACAAAGGAGGATGAAT+TGG | 0.333186 | 6.4:-2285626 | MS.gene62388:CDS |
| CGTACTTTCTTGTTATTCTC+TGG | 0.340846 | 6.4:+2285652 | None:intergenic |
| CTCTTGCTGCACGCTCTTCA+GGG | 0.364636 | 6.4:+2288032 | None:intergenic |
| GCGTGCAGCAAGAGAACTTA+GGG | 0.387586 | 6.4:-2288023 | MS.gene62388:CDS |
| CACGTTACAAGAAGCAGATA+TGG | 0.391418 | 6.4:-2288339 | MS.gene62388:CDS |
| GGATAAATTATTCGATAAAC+CGG | 0.399515 | 6.4:-2286342 | MS.gene62388:intron |
| CAAAGTCAATTTGGATCGCT+TGG | 0.417192 | 6.4:-2286363 | MS.gene62388:CDS |
| TCTCTCTGATATTGATGATA+AGG | 0.438833 | 6.4:-2289519 | MS.gene62388:CDS |
| CAAGCGATCCAAATTGACTT+TGG | 0.440288 | 6.4:+2286364 | None:intergenic |
| ATCATGCTCACCATCTTTAG+TGG | 0.455651 | 6.4:+2289595 | None:intergenic |
| TTGCATATTTGCAGGAAAAG+AGG | 0.464764 | 6.4:-2286745 | MS.gene62388:intron |
| TGTACAGGAACAAGCTATCA+AGG | 0.491940 | 6.4:-2288110 | MS.gene62388:intron |
| TCAGCCGGAAATTCGTTGAC+TGG | 0.493352 | 6.4:+2285601 | None:intergenic |
| AGCGTGCAGCAAGAGAACTT+AGG | 0.503042 | 6.4:-2288024 | MS.gene62388:CDS |
| GAGTATGTGGCCACTAAAGA+TGG | 0.513135 | 6.4:-2289605 | MS.gene62388:CDS |
| GTATGCTGCATATAGGTTGA+TGG | 0.520154 | 6.4:-2288385 | MS.gene62388:intron |
| GAGGAAACAACGAGCTGAAG+AGG | 0.520287 | 6.4:-2286726 | MS.gene62388:CDS |
| AGCTGAAGAGGAAAGAAGGT+TGG | 0.521935 | 6.4:-2286714 | MS.gene62388:CDS |
| GCTGAAGAGGAAAGAAGGTT+GGG | 0.523634 | 6.4:-2286713 | MS.gene62388:CDS |
| ACGTTACAAGAAGCAGATAT+GGG | 0.526035 | 6.4:-2288338 | MS.gene62388:CDS |
| AAGCCGCTGCAGCAGCTGAA+AGG | 0.539825 | 6.4:-2288087 | MS.gene62388:CDS |
| GCATACATATCTTCATCAGC+CGG | 0.546898 | 6.4:+2285586 | None:intergenic |
| GCCTCTACAGCAGATTGAGC+AGG | 0.553208 | 6.4:+2286689 | None:intergenic |
| TCCTGCTCAATCTGCTGTAG+AGG | 0.553426 | 6.4:-2286690 | MS.gene62388:CDS |
| GTGTTTCCTCCTCGTTGTGA+AGG | 0.556004 | 6.4:+2288359 | None:intergenic |
| AACGAGCTGAAGAGGAAAGA+AGG | 0.557519 | 6.4:-2286718 | MS.gene62388:CDS |
| CTCTGATATTGATGATAAGG+AGG | 0.595070 | 6.4:-2289516 | MS.gene62388:intron |
| ACATATGACTACGAGGAAGC+CGG | 0.595992 | 6.4:-2285523 | MS.gene62388:CDS |
| TCTCCTTTCAGCTGCTGCAG+CGG | 0.596698 | 6.4:+2288084 | None:intergenic |
| GGGAGCTGTTGCTGCAGATG+TGG | 0.605282 | 6.4:-2288002 | MS.gene62388:CDS |
| TCTTGCTGCACGCTCTTCAG+GGG | 0.610688 | 6.4:+2288033 | None:intergenic |
| GAAAGTACGATTTGAAACAA+AGG | 0.613182 | 6.4:-2285638 | MS.gene62388:CDS |
| AGATGTGGCAAAATCCAGAA+AGG | 0.627135 | 6.4:-2287987 | MS.gene62388:intron |
| CAGCCGAATGTTGAAAACAA+AGG | 0.633769 | 6.4:-2286663 | MS.gene62388:intron |
| AGCTGAAAGGAGAAGACTAG+AGG | 0.638220 | 6.4:-2288074 | MS.gene62388:CDS |
| TGAAAGGAGAAGACTAGAGG+AGG | 0.639922 | 6.4:-2288071 | MS.gene62388:CDS |
| CGTGCAGCAAGAGAACTTAG+GGG | 0.663010 | 6.4:-2288022 | MS.gene62388:CDS |
| AGTACGATTTGAAACAAAGG+AGG | 0.665275 | 6.4:-2285635 | MS.gene62388:CDS |
| TAATAATCGAGAGTATCTTG+AGG | 0.689797 | 6.4:-2288311 | MS.gene62388:intron |
| TATGACTACGAGGAAGCCGG+TGG | 0.707167 | 6.4:-2285520 | MS.gene62388:CDS |
| CTATGAGACATATGACTACG+AGG | 0.726665 | 6.4:-2285530 | MS.gene62388:CDS |
| TGGCTACCTTCACAACGAGG+AGG | 0.742156 | 6.4:-2288365 | MS.gene62388:CDS |
| TGATGGCTACCTTCACAACG+AGG | 0.743013 | 6.4:-2288368 | MS.gene62388:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATTAAAATTTCCT+AGG | + | chr6.4:2286768-2286787 | None:intergenic | 10.0% |
| !! | ATAAAAATTAAAATTTCCTA+GGG | + | chr6.4:2286767-2286786 | None:intergenic | 10.0% |
| !! | ATTATTGTTACAAGTTATAA+TGG | - | chr6.4:2287817-2287836 | MS.gene62388:intron | 15.0% |
| !! | GTAATTATGTAATTTAGAAA+AGG | + | chr6.4:2289332-2289351 | None:intergenic | 15.0% |
| !! | TCCTACAAATAAAAAATTTA+GGG | + | chr6.4:2288718-2288737 | None:intergenic | 15.0% |
| !! | TTCCTACAAATAAAAAATTT+AGG | + | chr6.4:2288719-2288738 | None:intergenic | 15.0% |
| !! | TTTAATTGATCGATAAAATT+GGG | - | chr6.4:2289230-2289249 | MS.gene62388:intron | 15.0% |
| !!! | TATTTATTTACTTGATAGTT+TGG | - | chr6.4:2289395-2289414 | MS.gene62388:intron | 15.0% |
| !! | AAAACTGAAGATTTATGTAA+GGG | + | chr6.4:2286529-2286548 | None:intergenic | 20.0% |
| !! | AAGAAATTAGATTATGCATT+GGG | - | chr6.4:2286050-2286069 | MS.gene62388:intron | 20.0% |
| !! | AAGCAACAAAAAAAAAGATA+AGG | + | chr6.4:2288964-2288983 | None:intergenic | 20.0% |
| !! | AGCAACAAAAAAAAAGATAA+GGG | + | chr6.4:2288963-2288982 | None:intergenic | 20.0% |
| !! | ATATGAACTTTGATATTATG+GGG | + | chr6.4:2287564-2287583 | None:intergenic | 20.0% |
| !! | ATTACATATATTCACTCTTT+AGG | - | chr6.4:2289254-2289273 | MS.gene62388:intron | 20.0% |
| !! | CGTATATATAAATAAATGGT+GGG | - | chr6.4:2286215-2286234 | MS.gene62388:intron | 20.0% |
| !! | GATATGAACTTTGATATTAT+GGG | + | chr6.4:2287565-2287584 | None:intergenic | 20.0% |
| !! | GTTTAATTGATCGATAAAAT+TGG | - | chr6.4:2289229-2289248 | MS.gene62388:intron | 20.0% |
| !! | TAAAACTGAAGATTTATGTA+AGG | + | chr6.4:2286530-2286549 | None:intergenic | 20.0% |
| !! | TAAGAAATTAGATTATGCAT+TGG | - | chr6.4:2286049-2286068 | MS.gene62388:intron | 20.0% |
| !! | TCTAAACATCAAATATACAA+TGG | + | chr6.4:2286478-2286497 | None:intergenic | 20.0% |
| !! | TCTATCAGTTATAAAAGAAA+AGG | + | chr6.4:2289073-2289092 | None:intergenic | 20.0% |
| !! | TGAGTTATATAATTAACACA+GGG | - | chr6.4:2287743-2287762 | MS.gene62388:intron | 20.0% |
| !! | TGATATGAACTTTGATATTA+TGG | + | chr6.4:2287566-2287585 | None:intergenic | 20.0% |
| !! | TTACATATATTCACTCTTTA+GGG | - | chr6.4:2289255-2289274 | MS.gene62388:intron | 20.0% |
| !! | TTAGTTGTATCATTTCTAAA+AGG | + | chr6.4:2287855-2287874 | None:intergenic | 20.0% |
| !! | TTATATTGCAAACAATTGAT+AGG | - | chr6.4:2285930-2285949 | MS.gene62388:intron | 20.0% |
| !!! | AAATAAAAAATTTAGGGCTT+GGG | + | chr6.4:2288712-2288731 | None:intergenic | 20.0% |
| !!! | AGTAAATATGATTTGTTCAT+TGG | - | chr6.4:2288800-2288819 | MS.gene62388:intron | 20.0% |
| !!! | ATACATTTTCAGAAAATTCT+AGG | + | chr6.4:2288830-2288849 | None:intergenic | 20.0% |
| !!! | GTAAATATGATTTGTTCATT+GGG | - | chr6.4:2288801-2288820 | MS.gene62388:intron | 20.0% |
| ! | AAACTAGATTTACAAACTGT+AGG | + | chr6.4:2285623-2285642 | None:intergenic | 25.0% |
| ! | AACAATGCTAAAAAAAATCC+TGG | + | chr6.4:2285856-2285875 | None:intergenic | 25.0% |
| ! | AATGAAAAACAAAGAGTGAA+AGG | + | chr6.4:2286417-2286436 | None:intergenic | 25.0% |
| ! | ACCTCTAATATCAACAAAAA+AGG | + | chr6.4:2287001-2287020 | None:intergenic | 25.0% |
| ! | ACTAATGAAAAGTCTATGTT+GGG | - | chr6.4:2289294-2289313 | MS.gene62388:intron | 25.0% |
| ! | ATAAGAATATGCAAACACAT+GGG | - | chr6.4:2287453-2287472 | MS.gene62388:intron | 25.0% |
| ! | CTGAGTTATATAATTAACAC+AGG | - | chr6.4:2287742-2287761 | MS.gene62388:intron | 25.0% |
| ! | GAGTTATATAATTAACACAG+GGG | - | chr6.4:2287744-2287763 | MS.gene62388:intron | 25.0% |
| ! | GCGTATATATAAATAAATGG+TGG | - | chr6.4:2286214-2286233 | MS.gene62388:intron | 25.0% |
| ! | GGATAAATTATTCGATAAAC+CGG | - | chr6.4:2288928-2288947 | MS.gene62388:intron | 25.0% |
| ! | GGTGCGTATATATAAATAAA+TGG | - | chr6.4:2286211-2286230 | MS.gene62388:intron | 25.0% |
| ! | TACATATATTCACTCTTTAG+GGG | - | chr6.4:2289256-2289275 | MS.gene62388:intron | 25.0% |
| ! | TATGATAATTATCAGATTCC+CGG | + | chr6.4:2286333-2286352 | None:intergenic | 25.0% |
| ! | TATGATCTTATTCCTATCAA+TGG | - | chr6.4:2288351-2288370 | MS.gene62388:CDS | 25.0% |
| ! | TCATATTTACTGCTCAAATT+TGG | + | chr6.4:2288791-2288810 | None:intergenic | 25.0% |
| ! | TGATAAGAGTTTATAAAGAG+AGG | + | chr6.4:2286118-2286137 | None:intergenic | 25.0% |
| ! | TGATAGGAATAAGATCATAT+AGG | + | chr6.4:2288350-2288369 | None:intergenic | 25.0% |
| ! | TTAAAGTTCTTGGAAAATGT+TGG | + | chr6.4:2288178-2288197 | None:intergenic | 25.0% |
| ! | TTAAATATACTACTCGATGT+GGG | - | chr6.4:2287529-2287548 | MS.gene62388:intron | 25.0% |
| ! | TTAATTGGGTCATGTATATA+CGG | + | chr6.4:2289478-2289497 | None:intergenic | 25.0% |
| ! | TTATGATGTGTAAATAGTTC+CGG | - | chr6.4:2286311-2286330 | MS.gene62388:intron | 25.0% |
| ! | TTCAAATGCTTCTTATAAAC+AGG | - | chr6.4:2289590-2289609 | MS.gene62388:CDS | 25.0% |
| ! | TTGGATGTAGAAAAATAAAC+AGG | + | chr6.4:2287031-2287050 | None:intergenic | 25.0% |
| !! | AAAAATAACCCATGCTTTTA+TGG | - | chr6.4:2286596-2286615 | MS.gene62388:intron | 25.0% |
| !! | ATATATAAATAAATGGTGGG+TGG | - | chr6.4:2286218-2286237 | MS.gene62388:intron | 25.0% |
| !! | ATTTCAGATTTTATCTTGTG+TGG | - | chr6.4:2287097-2287116 | MS.gene62388:intron | 25.0% |
| !! | CAAATAAAAAATTTAGGGCT+TGG | + | chr6.4:2288713-2288732 | None:intergenic | 25.0% |
| !! | GACTAATATTCACCATATTT+TGG | - | chr6.4:2288312-2288331 | MS.gene62388:CDS | 25.0% |
| !!! | AAATGGTATTTTAGACACAA+CGG | + | chr6.4:2289453-2289472 | None:intergenic | 25.0% |
| !!! | ACATAAATCTTCAGTTTTAG+TGG | - | chr6.4:2286531-2286550 | MS.gene62388:intron | 25.0% |
| !!! | ATACCTTTGTTTTCAACATT+CGG | + | chr6.4:2288613-2288632 | None:intergenic | 25.0% |
| !!! | ATCATTGACTATTTTTTTCC+AGG | - | chr6.4:2285835-2285854 | MS.gene62388:intron | 25.0% |
| !!! | GCCCTAAATTTTTTATTTGT+AGG | - | chr6.4:2288714-2288733 | MS.gene62388:intron | 25.0% |
| !!! | GTAACTTTGGAATCAATTTT+CGG | - | chr6.4:2287305-2287324 | MS.gene62388:intron | 25.0% |
| !!! | TAACTTTGGAATCAATTTTC+GGG | - | chr6.4:2287306-2287325 | MS.gene62388:intron | 25.0% |
| !!! | TCACTCTTTGTTTTTCATTA+AGG | - | chr6.4:2286418-2286437 | MS.gene62388:intron | 25.0% |
| !!! | TCCTTTTTTGTTGATATTAG+AGG | - | chr6.4:2286997-2287016 | MS.gene62388:intron | 25.0% |
| !!! | TCTTTGTTTTTCATTAAGGT+GGG | - | chr6.4:2286422-2286441 | MS.gene62388:intron | 25.0% |
| !!! | TCTTTTATTTCTCTTAACGA+TGG | - | chr6.4:2285580-2285599 | MS.gene62388:CDS | 25.0% |
| !!! | TTACAAGTTATAATGGATGA+AGG | - | chr6.4:2287824-2287843 | MS.gene62388:intron | 25.0% |
| AAAACTGGATTATAAGGTGA+GGG | - | chr6.4:2286089-2286108 | MS.gene62388:intron | 30.0% | |
| AAAATCCAGAAAGGTAACTT+TGG | - | chr6.4:2287292-2287311 | MS.gene62388:intron | 30.0% | |
| AAACAGTTCACATCTCAAAA+GGG | + | chr6.4:2287915-2287934 | None:intergenic | 30.0% | |
| AAATATCCACCATAAAAGCA+TGG | + | chr6.4:2286608-2286627 | None:intergenic | 30.0% | |
| AAATGTTGTATGCTGCATAT+AGG | - | chr6.4:2286878-2286897 | MS.gene62388:intron | 30.0% | |
| AATCAAGATGCAAGAATGAT+AGG | + | chr6.4:2286739-2286758 | None:intergenic | 30.0% | |
| ATAAAAACCTAATGCGGTAT+CGG | + | chr6.4:2286259-2286278 | None:intergenic | 30.0% | |
| ATCATTATGTGACCATTGAT+AGG | + | chr6.4:2288366-2288385 | None:intergenic | 30.0% | |
| CACAAACAAAAGCCAAAATA+TGG | + | chr6.4:2288327-2288346 | None:intergenic | 30.0% | |
| CCTTTATTACCGGTAATAAA+GGG | + | chr6.4:2287971-2287952 | None:intergenic | 30.0% | |
| CTCAACATAAAAACCTAATG+CGG | + | chr6.4:2286265-2286284 | None:intergenic | 30.0% | |
| GAAATGCTATTATTCGAACT+TGG | - | chr6.4:2289044-2289063 | MS.gene62388:intron | 30.0% | |
| GACTAATGAAAAGTCTATGT+TGG | - | chr6.4:2289293-2289312 | MS.gene62388:intron | 30.0% | |
| GATAAGAATATGCAAACACA+TGG | - | chr6.4:2287452-2287471 | MS.gene62388:intron | 30.0% | |
| GGTATTTATTATGAAAACGC+AGG | - | chr6.4:2288628-2288647 | MS.gene62388:intron | 30.0% | |
| GTAAATGTTAGTAATGCATC+TGG | - | chr6.4:2288073-2288092 | MS.gene62388:CDS | 30.0% | |
| GTATCTGATTATTGGTATTC+TGG | - | chr6.4:2287409-2287428 | MS.gene62388:intron | 30.0% | |
| GTCATGTATATACGGAAAAA+TGG | + | chr6.4:2289470-2289489 | None:intergenic | 30.0% | |
| GTTAAATATACTACTCGATG+TGG | - | chr6.4:2287528-2287547 | MS.gene62388:intron | 30.0% | |
| GTTCTCAAACATAGTCTAAA+TGG | - | chr6.4:2285975-2285994 | MS.gene62388:intron | 30.0% | |
| GTTTGCTTAAAATGCTTTCA+GGG | - | chr6.4:2285639-2285658 | MS.gene62388:CDS | 30.0% | |
| TAAGAATATGCAAACACATG+GGG | - | chr6.4:2287454-2287473 | MS.gene62388:intron | 30.0% | |
| TACACCATGCAGAAAATAAA+CGG | + | chr6.4:2288004-2288023 | None:intergenic | 30.0% | |
| TATGATGTGTAAATAGTTCC+GGG | - | chr6.4:2286312-2286331 | MS.gene62388:intron | 30.0% | |
| TCAATATCCATAAAAACCAC+CGG | + | chr6.4:2289769-2289788 | None:intergenic | 30.0% | |
| TCCCACATAGAAAAGATATA+AGG | + | chr6.4:2286143-2286162 | None:intergenic | 30.0% | |
| TCCTTTATTACCGGTAATAA+AGG | + | chr6.4:2287955-2287974 | None:intergenic | 30.0% | |
| TCTTGGAAAATGTTGGATAA+AGG | + | chr6.4:2288171-2288190 | None:intergenic | 30.0% | |
| TTGTAAAAGCTAGCTATCAA+GGG | - | chr6.4:2287490-2287509 | MS.gene62388:intron | 30.0% | |
| TTTATTACCGGTAATAAAGG+AGG | - | chr6.4:2287954-2287973 | MS.gene62388:intron | 30.0% | |
| TTTGCTTAAAATGCTTTCAG+GGG | - | chr6.4:2285640-2285659 | MS.gene62388:CDS | 30.0% | |
| ! | AATATCCACCATAAAAGCAT+GGG | + | chr6.4:2286607-2286626 | None:intergenic | 30.0% |
| ! | AGTTTGCTTAAAATGCTTTC+AGG | - | chr6.4:2285638-2285657 | MS.gene62388:CDS | 30.0% |
| ! | CATATTTCATTTTGCATGTG+CGG | - | chr6.4:2288756-2288775 | MS.gene62388:intron | 30.0% |
| ! | GAAAGTACGATTTGAAACAA+AGG | - | chr6.4:2289632-2289651 | MS.gene62388:intron | 30.0% |
| ! | GCCTTATATCTTTTCTATGT+GGG | - | chr6.4:2286139-2286158 | MS.gene62388:intron | 30.0% |
| ! | TCTCTCTGATATTGATGATA+AGG | - | chr6.4:2285751-2285770 | MS.gene62388:intron | 30.0% |
| ! | TGTTTTGTAAACTTTTCACC+AGG | + | chr6.4:2288489-2288508 | None:intergenic | 30.0% |
| !! | AGCATACAACATTTTAGCAA+GGG | + | chr6.4:2286872-2286891 | None:intergenic | 30.0% |
| !! | TAATAATCGAGAGTATCTTG+AGG | - | chr6.4:2286959-2286978 | MS.gene62388:intron | 30.0% |
| !! | TATGTCTCATAGTCATTTTC+TGG | + | chr6.4:2289732-2289751 | None:intergenic | 30.0% |
| !! | TTGTTACTTTGCATATTTGC+AGG | - | chr6.4:2288517-2288536 | MS.gene62388:intron | 30.0% |
| !!! | AACTTTGGAATCAATTTTCG+GGG | - | chr6.4:2287307-2287326 | MS.gene62388:intron | 30.0% |
| !!! | CTCTTTGTTTTTCATTAAGG+TGG | - | chr6.4:2286421-2286440 | MS.gene62388:intron | 30.0% |
| AAAACACTGAGCAAGAATAC+TGG | + | chr6.4:2287365-2287384 | None:intergenic | 35.0% | |
| AAAATCCAATGCAGGAAGTA+TGG | + | chr6.4:2285793-2285812 | None:intergenic | 35.0% | |
| AAACTGGATTATAAGGTGAG+GGG | - | chr6.4:2286090-2286109 | MS.gene62388:intron | 35.0% | |
| AAAGAAGCTGCTTGTAGAAA+TGG | + | chr6.4:2289201-2289220 | None:intergenic | 35.0% | |
| AAAGGGAAATTGCGAATCAT+TGG | + | chr6.4:2287898-2287917 | None:intergenic | 35.0% | |
| AAATTCCATACTTCCTGCAT+TGG | - | chr6.4:2285785-2285804 | MS.gene62388:intron | 35.0% | |
| AAGATAAGGGAGAGAATTAC+CGG | + | chr6.4:2288950-2288969 | None:intergenic | 35.0% | |
| AAGGGAAATTGCGAATCATT+GGG | + | chr6.4:2287897-2287916 | None:intergenic | 35.0% | |
| AATGATGAACAATATCGCGA+TGG | + | chr6.4:2285821-2285840 | None:intergenic | 35.0% | |
| ACAGGACATATGTGAGATTA+CGG | + | chr6.4:2288038-2288057 | None:intergenic | 35.0% | |
| ACCATCTCTGTTAAAGTTCT+TGG | + | chr6.4:2288188-2288207 | None:intergenic | 35.0% | |
| ACGTTACAAGAAGCAGATAT+GGG | - | chr6.4:2286932-2286951 | MS.gene62388:intron | 35.0% | |
| ATACAGCTGTGGAAATTAGA+AGG | + | chr6.4:2289104-2289123 | None:intergenic | 35.0% | |
| ATGAATGCAGGAACAAGAAA+TGG | + | chr6.4:2286644-2286663 | None:intergenic | 35.0% | |
| ATGCAGAAAATAAACGGAAG+AGG | + | chr6.4:2287998-2288017 | None:intergenic | 35.0% | |
| ATTACCGGTAATAAAGGGAA+AGG | + | chr6.4:2287949-2287968 | None:intergenic | 35.0% | |
| CAAAACTGGATTATAAGGTG+AGG | - | chr6.4:2286088-2286107 | MS.gene62388:intron | 35.0% | |
| CAAAAGAAATGATACAGCTG+TGG | + | chr6.4:2289115-2289134 | None:intergenic | 35.0% | |
| CAGAGGAAAGTAACTCTATT+TGG | + | chr6.4:2285539-2285558 | None:intergenic | 35.0% | |
| CCCTTTATTACCGGTAATAA+AGG | - | chr6.4:2287951-2287970 | MS.gene62388:intron | 35.0% | |
| CCTCACAAAACTGGATTATA+AGG | - | chr6.4:2286083-2286102 | MS.gene62388:intron | 35.0% | |
| CTGTTGTATTGTAACTTCAG+AGG | + | chr6.4:2287773-2287792 | None:intergenic | 35.0% | |
| CTTGTAAAAGCTAGCTATCA+AGG | - | chr6.4:2287489-2287508 | MS.gene62388:intron | 35.0% | |
| GAAACAGTTCACATCTCAAA+AGG | + | chr6.4:2287916-2287935 | None:intergenic | 35.0% | |
| GCATCTTGATTTAAATCCCT+AGG | - | chr6.4:2286748-2286767 | MS.gene62388:intron | 35.0% | |
| TACTAACATTTACGAAGCTG+CGG | + | chr6.4:2288066-2288085 | None:intergenic | 35.0% | |
| TCAGCAAAGTTGTACTATGA+AGG | + | chr6.4:2288459-2288478 | None:intergenic | 35.0% | |
| TCCAAGAACTTTAACAGAGA+TGG | - | chr6.4:2288184-2288203 | MS.gene62388:intron | 35.0% | |
| TCTACCTTCAATTCTTGTAC+AGG | - | chr6.4:2287145-2287164 | MS.gene62388:intron | 35.0% | |
| TGAAACAAAGGAGGATGAAT+TGG | - | chr6.4:2289644-2289663 | MS.gene62388:intron | 35.0% | |
| TGATTCCAAAGTTACCTTTC+TGG | + | chr6.4:2287300-2287319 | None:intergenic | 35.0% | |
| TGTTAATCAGCACATGAATC+CGG | + | chr6.4:2288115-2288134 | None:intergenic | 35.0% | |
| TGTTCCTGTACAAGAATTGA+AGG | + | chr6.4:2287152-2287171 | None:intergenic | 35.0% | |
| TTGCATATTTGCAGGAAAAG+AGG | - | chr6.4:2288525-2288544 | MS.gene62388:intron | 35.0% | |
| TTGCTTAAAATGCTTTCAGG+GGG | - | chr6.4:2285641-2285660 | MS.gene62388:CDS | 35.0% | |
| ! | AAAATCTGAAATCGCAAACC+AGG | + | chr6.4:2287089-2287108 | None:intergenic | 35.0% |
| ! | AAATCTGAAATCGCAAACCA+GGG | + | chr6.4:2287088-2287107 | None:intergenic | 35.0% |
| ! | AAGAACCCACCAATATTTTC+AGG | + | chr6.4:2285564-2285583 | None:intergenic | 35.0% |
| ! | AATAACCCATGCTTTTATGG+TGG | - | chr6.4:2286599-2286618 | MS.gene62388:intron | 35.0% |
| ! | AGTACGATTTGAAACAAAGG+AGG | - | chr6.4:2289635-2289654 | MS.gene62388:intron | 35.0% |
| ! | ATCTTTTCTATGTGGGACTT+GGG | - | chr6.4:2286146-2286165 | MS.gene62388:intron | 35.0% |
| ! | ATTTTCCAGCTACTTGGAAA+AGG | + | chr6.4:2286361-2286380 | None:intergenic | 35.0% |
| ! | CGCCTTATATCTTTTCTATG+TGG | - | chr6.4:2286138-2286157 | MS.gene62388:intron | 35.0% |
| ! | CTCTGATATTGATGATAAGG+AGG | - | chr6.4:2285754-2285773 | MS.gene62388:intron | 35.0% |
| ! | CTTGCTAGTTGAAAGTGTAA+GGG | - | chr6.4:2286569-2286588 | MS.gene62388:intron | 35.0% |
| ! | TATCTTTTCTATGTGGGACT+TGG | - | chr6.4:2286145-2286164 | MS.gene62388:intron | 35.0% |
| ! | TCTTGCTAGTTGAAAGTGTA+AGG | - | chr6.4:2286568-2286587 | MS.gene62388:intron | 35.0% |
| !! | CAGCATACAACATTTTAGCA+AGG | + | chr6.4:2286873-2286892 | None:intergenic | 35.0% |
| !! | CCTTATAATCCAGTTTTGTG+AGG | + | chr6.4:2286086-2286105 | None:intergenic | 35.0% |
| !! | CGTACTTTCTTGTTATTCTC+TGG | + | chr6.4:2289621-2289640 | None:intergenic | 35.0% |
| !! | TACAACATTTTAGCAAGGGA+TGG | + | chr6.4:2286868-2286887 | None:intergenic | 35.0% |
| !! | TCTTCCGTTTATTTTCTGCA+TGG | - | chr6.4:2287997-2288016 | MS.gene62388:CDS | 35.0% |
| !!! | ACTTTGGAATCAATTTTCGG+GGG | - | chr6.4:2287308-2287327 | MS.gene62388:intron | 35.0% |
| !!! | GATAGCTAGCTTTTACAAGA+GGG | + | chr6.4:2287488-2287507 | None:intergenic | 35.0% |
| !!! | TGATAGCTAGCTTTTACAAG+AGG | + | chr6.4:2287489-2287508 | None:intergenic | 35.0% |
| AACTTTGCTGAACTATGACC+TGG | - | chr6.4:2288468-2288487 | MS.gene62388:intron | 40.0% | |
| AATATGCAAACACATGGGGA+TGG | - | chr6.4:2287458-2287477 | MS.gene62388:intron | 40.0% | |
| ACTCAGCTCCAAAGTCAATT+TGG | - | chr6.4:2288898-2288917 | MS.gene62388:intron | 40.0% | |
| AGATGTGGCAAAATCCAGAA+AGG | - | chr6.4:2287283-2287302 | MS.gene62388:intron | 40.0% | |
| ATACACGCCTCCTTTATTAC+CGG | + | chr6.4:2287964-2287983 | None:intergenic | 40.0% | |
| ATCATGCTCACCATCTTTAG+TGG | + | chr6.4:2285678-2285697 | None:intergenic | 40.0% | |
| CAAAGTCAATTTGGATCGCT+TGG | - | chr6.4:2288907-2288926 | MS.gene62388:intron | 40.0% | |
| CACGTTACAAGAAGCAGATA+TGG | - | chr6.4:2286931-2286950 | MS.gene62388:intron | 40.0% | |
| CAGCCGAATGTTGAAAACAA+AGG | - | chr6.4:2288607-2288626 | MS.gene62388:intron | 40.0% | |
| CGGTAACTGTTCTTAGTTAC+TGG | - | chr6.4:2287668-2287687 | MS.gene62388:intron | 40.0% | |
| CGTGCACTGTATCTGATTAT+TGG | - | chr6.4:2287401-2287420 | MS.gene62388:intron | 40.0% | |
| CTAACTCATCCTCACAAAAC+TGG | - | chr6.4:2286074-2286093 | MS.gene62388:intron | 40.0% | |
| CTATGAGACATATGACTACG+AGG | - | chr6.4:2289740-2289759 | MS.gene62388:CDS | 40.0% | |
| CTGAGCCTGAAAATATTGGT+GGG | - | chr6.4:2285556-2285575 | MS.gene62388:CDS | 40.0% | |
| GCAAAACTGTTTCGTCTGTT+TGG | - | chr6.4:2288290-2288309 | MS.gene62388:intron | 40.0% | |
| GCATACATATCTTCATCAGC+CGG | + | chr6.4:2289687-2289706 | None:intergenic | 40.0% | |
| GGGAAGATTGGAATGGATAA+GGG | + | chr6.4:2288218-2288237 | None:intergenic | 40.0% | |
| GTGTGTCTCAATAGCTAAAG+TGG | - | chr6.4:2288401-2288420 | MS.gene62388:intron | 40.0% | |
| GTTAATCAGCACATGAATCC+GGG | + | chr6.4:2288114-2288133 | None:intergenic | 40.0% | |
| TCAGCCTTTCCCTTTATTAC+CGG | - | chr6.4:2287942-2287961 | MS.gene62388:intron | 40.0% | |
| TCCTCTGAGCCTGAAAATAT+TGG | - | chr6.4:2285552-2285571 | MS.gene62388:CDS | 40.0% | |
| TCTGAGCCTGAAAATATTGG+TGG | - | chr6.4:2285555-2285574 | MS.gene62388:CDS | 40.0% | |
| TCTTGTGTGGAAGTTCAATG+TGG | - | chr6.4:2287110-2287129 | MS.gene62388:intron | 40.0% | |
| TGGCTAAGAAAATCCAATGC+AGG | + | chr6.4:2285801-2285820 | None:intergenic | 40.0% | |
| TGTACAGGAACAAGCTATCA+AGG | - | chr6.4:2287160-2287179 | MS.gene62388:intron | 40.0% | |
| TTAGTAATGCATCTGGCAGA+TGG | - | chr6.4:2288080-2288099 | MS.gene62388:CDS | 40.0% | |
| ! | AAGAACAGTTACCGACTGAA+GGG | + | chr6.4:2287662-2287681 | None:intergenic | 40.0% |
| ! | ACAGACGAAACAGTTTTGCA+CGG | + | chr6.4:2288289-2288308 | None:intergenic | 40.0% |
| ! | CAAGCGATCCAAATTGACTT+TGG | + | chr6.4:2288909-2288928 | None:intergenic | 40.0% |
| ! | CAGCTCTGATGTCAAATAAC+AGG | - | chr6.4:2287695-2287714 | MS.gene62388:intron | 40.0% |
| ! | CTGTTATTTGACATCAGAGC+TGG | + | chr6.4:2287697-2287716 | None:intergenic | 40.0% |
| ! | GTATGCTGCATATAGGTTGA+TGG | - | chr6.4:2286885-2286904 | MS.gene62388:intron | 40.0% |
| ! | TAAGAACAGTTACCGACTGA+AGG | + | chr6.4:2287663-2287682 | None:intergenic | 40.0% |
| ! | TATGATGCCTGCTCTTTTGT+AGG | - | chr6.4:2288682-2288701 | MS.gene62388:intron | 40.0% |
| ! | TTCTACATCCAACTCTGAAG+TGG | - | chr6.4:2287039-2287058 | MS.gene62388:intron | 40.0% |
| ! | TTCTCATGTCAACTTTTGCG+AGG | - | chr6.4:2286451-2286470 | MS.gene62388:intron | 40.0% |
| ! | TTTTGCATGTGCGGTTAAGT+TGG | - | chr6.4:2288765-2288784 | MS.gene62388:intron | 40.0% |
| !! | ACCAATATTTTCAGGCTCAG+AGG | + | chr6.4:2285556-2285575 | None:intergenic | 40.0% |
| !! | CAAAGCATTTTCCAGCTACT+TGG | + | chr6.4:2286367-2286386 | None:intergenic | 40.0% |
| !! | CAGTTTTGTGAGGATGAGTT+AGG | + | chr6.4:2286076-2286095 | None:intergenic | 40.0% |
| !! | TCTACATCCAACTCTGAAGT+GGG | - | chr6.4:2287040-2287059 | MS.gene62388:intron | 40.0% |
| !!! | CTTTGTTTTCAACATTCGGC+TGG | + | chr6.4:2288609-2288628 | None:intergenic | 40.0% |
| !!! | TGCTTTTTTGCAACCTTGCA+TGG | - | chr6.4:2289175-2289194 | MS.gene62388:intron | 40.0% |
| AACGAGCTGAAGAGGAAAGA+AGG | - | chr6.4:2288552-2288571 | MS.gene62388:intron | 45.0% | |
| ACATATGACTACGAGGAAGC+CGG | - | chr6.4:2289747-2289766 | MS.gene62388:CDS | 45.0% | |
| AGCTGAAAGGAGAAGACTAG+AGG | - | chr6.4:2287196-2287215 | MS.gene62388:intron | 45.0% | |
| AGCTGAAGAGGAAAGAAGGT+TGG | - | chr6.4:2288556-2288575 | MS.gene62388:intron | 45.0% | |
| CATATGTGAGATTACGGTGC+AGG | + | chr6.4:2288032-2288051 | None:intergenic | 45.0% | |
| CTTGTAGAAATGGCCATGCA+AGG | + | chr6.4:2289191-2289210 | None:intergenic | 45.0% | |
| GAGTATGTGGCCACTAAAGA+TGG | - | chr6.4:2285665-2285684 | MS.gene62388:intron | 45.0% | |
| GCACCAAGCCTAATAGTGTT+GGG | + | chr6.4:2286196-2286215 | None:intergenic | 45.0% | |
| GCTGAAGAGGAAAGAAGGTT+GGG | - | chr6.4:2288557-2288576 | MS.gene62388:intron | 45.0% | |
| GCTTGTATTGTGTCTTACCC+TGG | - | chr6.4:2287068-2287087 | MS.gene62388:intron | 45.0% | |
| GGAAAGATGAGCATGAATGC+AGG | + | chr6.4:2286656-2286675 | None:intergenic | 45.0% | |
| GGAACCAGTCAACGAATTTC+CGG | - | chr6.4:2289665-2289684 | MS.gene62388:intron | 45.0% | |
| GGGGAAGATTGGAATGGATA+AGG | + | chr6.4:2288219-2288238 | None:intergenic | 45.0% | |
| TACTACTCGATGTGGGACTT+TGG | - | chr6.4:2287536-2287555 | MS.gene62388:intron | 45.0% | |
| TCTTGCCTTCTAGTGTGTGA+GGG | - | chr6.4:2288145-2288164 | MS.gene62388:intron | 45.0% | |
| TGAAAGGAGAAGACTAGAGG+AGG | - | chr6.4:2287199-2287218 | MS.gene62388:intron | 45.0% | |
| ! | GGGTTTTCCTACAAAAGAGC+AGG | + | chr6.4:2288692-2288711 | None:intergenic | 45.0% |
| ! | GTGTTCCTTTTCCAAGTAGC+TGG | - | chr6.4:2286353-2286372 | MS.gene62388:CDS | 45.0% |
| ! | GTGTTTTACCCTTTACCGTG+CGG | - | chr6.4:2287378-2287397 | MS.gene62388:intron | 45.0% |
| !! | TTGGAATCAATTTTCGGGGG+AGG | - | chr6.4:2287311-2287330 | MS.gene62388:intron | 45.0% |
| !! | TAAAAATAATGATAAATATT+TGG | + | chr6.4:2286677-2286696 | None:intergenic | 5.0% |
| AAAGGCCCTCACACACTAGA+AGG | + | chr6.4:2288153-2288172 | None:intergenic | 50.0% | |
| ACGCCCAACACTATTAGGCT+TGG | - | chr6.4:2286190-2286209 | MS.gene62388:intron | 50.0% | |
| AGCGTGCAGCAAGAGAACTT+AGG | - | chr6.4:2287246-2287265 | MS.gene62388:intron | 50.0% | |
| ATAGGCTCCGATACCGCATT+AGG | - | chr6.4:2286249-2286268 | MS.gene62388:intron | 50.0% | |
| ATCAGCACATGAATCCGGGA+TGG | + | chr6.4:2288110-2288129 | None:intergenic | 50.0% | |
| CAAACAGTCCCATGGACAAG+GGG | + | chr6.4:2288238-2288257 | None:intergenic | 50.0% | |
| CACGGTGGATAAGCCAGAAA+GGG | + | chr6.4:2288271-2288290 | None:intergenic | 50.0% | |
| CCAAACAGTCCCATGGACAA+GGG | + | chr6.4:2288239-2288258 | None:intergenic | 50.0% | |
| CCAATCTTCCCCTTGTCCAT+GGG | - | chr6.4:2288227-2288246 | MS.gene62388:intron | 50.0% | |
| CGCACCAAGCCTAATAGTGT+TGG | + | chr6.4:2286197-2286216 | None:intergenic | 50.0% | |
| CGGAAAGGCTGAGTAAAGTG+TGG | + | chr6.4:2287634-2287653 | None:intergenic | 50.0% | |
| CGTGCAGCAAGAGAACTTAG+GGG | - | chr6.4:2287248-2287267 | MS.gene62388:intron | 50.0% | |
| GAGGAAACAACGAGCTGAAG+AGG | - | chr6.4:2288544-2288563 | MS.gene62388:intron | 50.0% | |
| GCATGTTCCCACTTCAGAGT+TGG | + | chr6.4:2287050-2287069 | None:intergenic | 50.0% | |
| GCGTGCAGCAAGAGAACTTA+GGG | - | chr6.4:2287247-2287266 | MS.gene62388:intron | 50.0% | |
| GGACAAGGGGAAGATTGGAA+TGG | + | chr6.4:2288225-2288244 | None:intergenic | 50.0% | |
| GTCTTGCCTTCTAGTGTGTG+AGG | - | chr6.4:2288144-2288163 | MS.gene62388:intron | 50.0% | |
| GTGTTTCCTCCTCGTTGTGA+AGG | + | chr6.4:2286914-2286933 | None:intergenic | 50.0% | |
| TACGAAGCTGCGGATCTAAC+AGG | + | chr6.4:2288056-2288075 | None:intergenic | 50.0% | |
| TCAGCCGGAAATTCGTTGAC+TGG | + | chr6.4:2289672-2289691 | None:intergenic | 50.0% | |
| TCCAATCTTCCCCTTGTCCA+TGG | - | chr6.4:2288226-2288245 | MS.gene62388:intron | 50.0% | |
| TCCTGCTCAATCTGCTGTAG+AGG | - | chr6.4:2288580-2288599 | MS.gene62388:intron | 50.0% | |
| TGAACAGCCAAACAGTCCCA+TGG | + | chr6.4:2288246-2288265 | None:intergenic | 50.0% | |
| TGATGGCTACCTTCACAACG+AGG | - | chr6.4:2286902-2286921 | MS.gene62388:intron | 50.0% | |
| TTGGCTGTTCACACCCTTTC+TGG | - | chr6.4:2288255-2288274 | MS.gene62388:intron | 50.0% | |
| TTTCCGATCAGCCCTTCAGT+CGG | - | chr6.4:2287648-2287667 | MS.gene62388:intron | 50.0% | |
| ! | CCTAATAGTGTTGGGCGTGA+GGG | + | chr6.4:2286188-2286207 | None:intergenic | 50.0% |
| ! | CTAATAGTGTTGGGCGTGAG+GGG | + | chr6.4:2286187-2286206 | None:intergenic | 50.0% |
| ! | GACGAAACAGTTTTGCACGG+TGG | + | chr6.4:2288286-2288305 | None:intergenic | 50.0% |
| ! | GAGGAAGCCGGTGGTTTTTA+TGG | - | chr6.4:2289759-2289778 | MS.gene62388:CDS | 50.0% |
| ! | TAATAGTGTTGGGCGTGAGG+GGG | + | chr6.4:2286186-2286205 | None:intergenic | 50.0% |
| ! | TTACCGACTGAAGGGCTGAT+CGG | + | chr6.4:2287654-2287673 | None:intergenic | 50.0% |
| CCCATGGACAAGGGGAAGAT+TGG | + | chr6.4:2288230-2288249 | None:intergenic | 55.0% | |
| CCCTCACGCCCAACACTATT+AGG | - | chr6.4:2286185-2286204 | MS.gene62388:intron | 55.0% | |
| CCCTTGTCCATGGGACTGTT+TGG | - | chr6.4:2288236-2288255 | MS.gene62388:intron | 55.0% | |
| CTCTTGCTGCACGCTCTTCA+GGG | + | chr6.4:2287241-2287260 | None:intergenic | 55.0% | |
| GACTGAAGGGCTGATCGGAA+AGG | + | chr6.4:2287649-2287668 | None:intergenic | 55.0% | |
| GCACGGTGGATAAGCCAGAA+AGG | + | chr6.4:2288272-2288291 | None:intergenic | 55.0% | |
| GCCAAACAGTCCCATGGACA+AGG | + | chr6.4:2288240-2288259 | None:intergenic | 55.0% | |
| GCCTCTACAGCAGATTGAGC+AGG | + | chr6.4:2288584-2288603 | None:intergenic | 55.0% | |
| TATGACTACGAGGAAGCCGG+TGG | - | chr6.4:2289750-2289769 | MS.gene62388:CDS | 55.0% | |
| TCTCCTTTCAGCTGCTGCAG+CGG | + | chr6.4:2287189-2287208 | None:intergenic | 55.0% | |
| TCTCTTGCTGCACGCTCTTC+AGG | + | chr6.4:2287242-2287261 | None:intergenic | 55.0% | |
| TCTTGCTGCACGCTCTTCAG+GGG | + | chr6.4:2287240-2287259 | None:intergenic | 55.0% | |
| TGGCAGATGGTTCTCCATCC+CGG | - | chr6.4:2288093-2288112 | MS.gene62388:CDS | 55.0% | |
| TGGCTACCTTCACAACGAGG+AGG | - | chr6.4:2286905-2286924 | MS.gene62388:intron | 55.0% | |
| ! | GCCTAATAGTGTTGGGCGTG+AGG | + | chr6.4:2286189-2286208 | None:intergenic | 55.0% |
| ! | GCTTTCAGGGGGAGAGTATG+TGG | - | chr6.4:2285652-2285671 | MS.gene62388:CDS | 55.0% |
| ! | GGTATCGGAGCCTATCGATC+AGG | + | chr6.4:2286244-2286263 | None:intergenic | 55.0% |
| AAGCCGCTGCAGCAGCTGAA+AGG | - | chr6.4:2287183-2287202 | MS.gene62388:intron | 60.0% | |
| AGTGCACGCCGCACGGTAAA+GGG | + | chr6.4:2287389-2287408 | None:intergenic | 60.0% | |
| CAGATACAGTGCACGCCGCA+CGG | + | chr6.4:2287396-2287415 | None:intergenic | 60.0% | |
| GGGAGCTGTTGCTGCAGATG+TGG | - | chr6.4:2287268-2287287 | MS.gene62388:intron | 60.0% | |
| ! | TGGGCGTGAGGGGGTGTATT+GGG | + | chr6.4:2286177-2286196 | None:intergenic | 60.0% |
| ! | TGGTGGGTGGCCTGATCGAT+AGG | - | chr6.4:2286231-2286250 | MS.gene62388:intron | 60.0% |
| ! | TTGGGCGTGAGGGGGTGTAT+TGG | + | chr6.4:2286178-2286197 | None:intergenic | 60.0% |
| CAGTGCACGCCGCACGGTAA+AGG | + | chr6.4:2287390-2287409 | None:intergenic | 65.0% | |
| GTAGAGACAGTGCAGCCGCC+AGG | + | chr6.4:2287612-2287631 | None:intergenic | 65.0% | |
| CAGTGCAGCCGCCAGGACGT+TGG | + | chr6.4:2287605-2287624 | None:intergenic | 70.0% | |
| CCCGAGAGCCAACGTCCTGG+CGG | - | chr6.4:2287594-2287613 | MS.gene62388:intron | 70.0% | |
| GCACCCGAGAGCCAACGTCC+TGG | - | chr6.4:2287591-2287610 | MS.gene62388:intron | 70.0% | |
| !! | CCGCCAGGACGTTGGCTCTC+GGG | + | chr6.4:2287597-2287616 | None:intergenic | 70.0% |
| !! | GCCGCCAGGACGTTGGCTCT+CGG | + | chr6.4:2287598-2287617 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 2285504 | 2289788 | 2285504 | ID=MS.gene62388 |
| chr6.4 | mRNA | 2285504 | 2289788 | 2285504 | ID=MS.gene62388.t1;Parent=MS.gene62388 |
| chr6.4 | exon | 2289719 | 2289788 | 2289719 | ID=MS.gene62388.t1.exon1;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2289719 | 2289788 | 2289719 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| chr6.4 | exon | 2289517 | 2289632 | 2289517 | ID=MS.gene62388.t1.exon2;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2289517 | 2289632 | 2289517 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| chr6.4 | exon | 2288312 | 2288392 | 2288312 | ID=MS.gene62388.t1.exon3;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2288312 | 2288392 | 2288312 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| chr6.4 | exon | 2287988 | 2288125 | 2287988 | ID=MS.gene62388.t1.exon4;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2287988 | 2288125 | 2287988 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| chr6.4 | exon | 2286664 | 2286753 | 2286664 | ID=MS.gene62388.t1.exon5;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2286664 | 2286753 | 2286664 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| chr6.4 | exon | 2286343 | 2286396 | 2286343 | ID=MS.gene62388.t1.exon6;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2286343 | 2286396 | 2286343 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| chr6.4 | exon | 2285504 | 2285680 | 2285504 | ID=MS.gene62388.t1.exon7;Parent=MS.gene62388.t1 |
| chr6.4 | CDS | 2285504 | 2285680 | 2285504 | ID=cds.MS.gene62388.t1;Parent=MS.gene62388.t1 |
| Gene Sequence |
| Protein sequence |
