AlfalfaGEDB | MS.gene64427

M. sativa cultivar XinJiangDaYe / MS.gene64427

KEGG: -
GO: GO:0003674 GO:0005488 GO:0030145 GO:0043167 GO:0043169 GO:0045735 GO:0046872 GO:0046914
PFAM: PF00190.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64427.t1	XP_013463539.1	92.3	208	16	0	1	208	3	210	2.80E-102	381.3

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64427.t1	Q9ZRA4	71.6	208	58	1	1	207	1	208	3.2e-78	292.7

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64427.t1	A0A072V680	92.3	208	16	0	1	208	3	210	2.0e-102	381.3

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050020	MS.gene64427	0.822358	2.47E-53	-1.69E-46
MS.gene050586	MS.gene64427	0.811325	7.41E-51	-1.69E-46
MS.gene051789	MS.gene64427	0.826973	2.02E-54	-1.69E-46
MS.gene052142	MS.gene64427	0.818539	1.86E-52	-1.69E-46
MS.gene053074	MS.gene64427	0.843324	1.50E-58	-1.69E-46
MS.gene053383	MS.gene64427	0.821652	3.60E-53	-1.69E-46
MS.gene05456	MS.gene64427	0.825933	3.58E-54	-1.69E-46
MS.gene055359	MS.gene64427	0.852578	4.21E-61	-1.69E-46
MS.gene058168	MS.gene64427	0.853778	1.91E-61	-1.69E-46
MS.gene059006	MS.gene64427	0.849235	3.68E-60	-1.69E-46
MS.gene059124	MS.gene64427	0.836668	8.18E-57	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64427.t1	MTR_2g041570	92.308	208	16	0	1	208	3	210	2.92e-140	390
MS.gene64427.t1	MTR_2g041580	92.308	208	16	0	1	208	3	210	2.03e-139	388
MS.gene64427.t1	MTR_2g041550	82.212	208	37	0	1	208	3	210	2.52e-123	347
MS.gene64427.t1	MTR_8g020590	63.942	208	75	0	1	208	1	208	1.25e-91	267
MS.gene64427.t1	MTR_8g020630	55.981	209	88	3	2	208	3	209	2.32e-79	236
MS.gene64427.t1	MTR_8g020650	56.477	193	82	2	16	208	19	209	2.48e-76	228
MS.gene64427.t1	MTR_8g020670	54.545	209	91	3	2	208	3	209	7.97e-76	227
MS.gene64427.t1	MTR_8g020610	52.885	208	92	2	5	208	2	207	1.11e-72	219
MS.gene64427.t1	MTR_2g044040	49.282	209	102	3	2	208	3	209	7.54e-69	209
MS.gene64427.t1	MTR_2g045100	50.718	209	99	3	2	208	3	209	2.22e-68	208
MS.gene64427.t1	MTR_2g036120	50.000	208	100	3	2	207	3	208	1.40e-65	201
MS.gene64427.t1	MTR_3g019710	48.804	209	103	3	2	208	3	209	2.39e-65	201
MS.gene64427.t1	MTR_3g019650	48.558	208	104	3	2	208	3	208	3.65e-64	197
MS.gene64427.t1	MTR_3g019680	48.558	208	104	3	2	208	3	208	1.11e-63	196
MS.gene64427.t1	MTR_4g010340	48.077	208	105	3	1	208	1	205	2.82e-60	187
MS.gene64427.t1	MTR_0284s0010	46.411	209	108	3	2	208	3	209	7.23e-60	186
MS.gene64427.t1	MTR_8g020770	45.024	211	112	3	1	208	3	212	6.86e-59	184
MS.gene64427.t1	MTR_5g031460	45.320	203	109	2	6	208	9	209	2.41e-58	182
MS.gene64427.t1	MTR_7g011340	46.392	194	102	2	15	208	18	209	5.48e-57	179
MS.gene64427.t1	MTR_8g020750	44.550	211	113	3	1	208	3	212	6.35e-57	179
MS.gene64427.t1	MTR_3g073170	45.503	189	97	4	21	208	27	210	1.77e-56	178
MS.gene64427.t1	MTR_8g020760	45.283	212	109	4	1	208	3	211	2.36e-55	175
MS.gene64427.t1	MTR_2g019780	42.925	212	110	5	3	208	6	212	4.02e-53	169
MS.gene64427.t1	MTR_3g019810	44.390	205	104	4	2	204	109	305	1.01e-49	164
MS.gene64427.t1	MTR_8g020763	42.778	180	100	3	30	208	13	190	9.03e-48	155
MS.gene64427.t1	MTR_2g030855	45.679	162	83	2	18	177	25	183	4.98e-42	141
MS.gene64427.t1	MTR_2g031270	41.489	188	103	3	18	201	26	210	2.54e-41	139
MS.gene64427.t1	MTR_1g079490	40.094	212	111	5	6	202	5	215	2.76e-40	137
MS.gene64427.t1	MTR_4g017050	38.498	213	114	5	5	202	4	214	1.34e-39	135
MS.gene64427.t1	MTR_5g046410	38.498	213	114	5	5	202	4	214	1.47e-39	135
MS.gene64427.t1	MTR_5g046430	38.498	213	114	5	5	202	4	214	1.47e-39	135
MS.gene64427.t1	MTR_4g017030	38.498	213	114	5	5	202	4	214	1.47e-39	135
MS.gene64427.t1	MTR_6g005310	39.070	215	116	5	1	202	1	213	2.07e-39	135
MS.gene64427.t1	MTR_6g005360	39.070	215	116	5	1	202	1	213	2.62e-39	134
MS.gene64427.t1	MTR_7g111240	41.176	187	105	2	21	205	26	209	3.92e-39	134
MS.gene64427.t1	MTR_1g085140	40.107	187	110	1	21	205	30	216	8.27e-39	133
MS.gene64427.t1	MTR_6g005340	38.605	215	117	5	1	202	1	213	1.38e-38	132
MS.gene64427.t1	MTR_7g111240	40.642	187	109	1	21	205	26	212	1.42e-38	132
MS.gene64427.t1	MTR_1g112200	36.275	204	121	3	1	202	9	205	1.78e-38	132
MS.gene64427.t1	MTR_1g060120	40.719	167	98	1	38	204	56	221	6.67e-38	131
MS.gene64427.t1	MTR_2g019250	37.089	213	117	5	5	202	4	214	7.53e-38	130
MS.gene64427.t1	MTR_4g017040	40.212	189	104	4	21	202	28	214	1.07e-37	130
MS.gene64427.t1	MTR_6g005330	41.489	188	102	4	21	202	28	213	1.81e-37	130
MS.gene64427.t1	MTR_1g023770	40.476	168	96	2	38	201	39	206	4.96e-37	128
MS.gene64427.t1	MTR_2g030895	41.420	169	94	3	38	201	7	175	1.10e-36	126
MS.gene64427.t1	MTR_2g030865	41.420	169	94	3	38	201	7	175	2.19e-36	125
MS.gene64427.t1	MTR_2g072560	53.571	112	50	2	2	113	6	115	1.31e-35	122
MS.gene64427.t1	MTR_4g027415	48.819	127	63	2	15	141	18	142	2.73e-35	122
MS.gene64427.t1	MTR_1g085500	36.066	183	115	1	21	201	29	211	2.56e-34	122
MS.gene64427.t1	MTR_5g036570	35.979	189	118	2	21	206	33	221	4.18e-34	121
MS.gene64427.t1	MTR_6g005380	40.373	161	89	3	12	167	19	177	1.27e-31	114
MS.gene64427.t1	MTR_6g005350	37.433	187	110	4	21	202	28	212	9.06e-31	112
MS.gene64427.t1	MTR_3g019610	52.427	103	47	2	2	104	6	106	4.45e-30	107
MS.gene64427.t1	MTR_2g031300	50.943	106	50	1	38	141	7	112	1.31e-29	107
MS.gene64427.t1	MTR_8g007300	35.028	177	102	5	2	167	5	179	1.45e-28	107
MS.gene64427.t1	MTR_3g096330	36.207	174	100	3	4	167	558	730	3.71e-28	111
MS.gene64427.t1	MTR_2g086630	32.828	198	117	5	9	202	17	202	3.30e-24	95.1
MS.gene64427.t1	MTR_2g086620	32.039	206	124	5	1	202	9	202	4.35e-24	95.1
MS.gene64427.t1	MTR_2g086640	32.039	206	124	5	1	202	8	201	8.83e-24	94.0
MS.gene64427.t1	MTR_4g052770	29.648	199	123	6	9	202	17	203	2.89e-18	79.7
MS.gene64427.t1	MTR_4g052780	33.077	130	86	1	74	202	74	203	3.24e-18	79.7
MS.gene64427.t1	MTR_2g096110	31.111	135	76	3	41	173	6	125	1.45e-16	73.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene64427.t1	AT5G20630	63.942	208	74	1	1	207	3	210	3.45e-92	269
MS.gene64427.t1	AT1G72610	62.981	208	77	0	1	208	1	208	2.46e-86	254
MS.gene64427.t1	AT5G39160	43.684	190	99	3	21	205	30	216	1.65e-43	145
MS.gene64427.t1	AT3G04200	45.026	191	99	3	21	205	33	223	2.55e-43	145
MS.gene64427.t1	AT5G39160	43.979	191	101	3	21	205	30	220	1.20e-42	143
MS.gene64427.t1	AT5G39190	43.979	191	101	3	21	205	30	220	1.99e-42	142
MS.gene64427.t1	AT5G39130	43.455	191	102	3	21	205	30	220	6.06e-42	141
MS.gene64427.t1	AT5G39110	44.149	188	98	4	21	201	30	217	1.29e-40	138
MS.gene64427.t1	AT3G62020	37.073	205	119	3	7	201	8	212	1.70e-40	137
MS.gene64427.t1	AT5G38960	42.857	196	97	6	21	205	32	223	2.93e-40	137
MS.gene64427.t1	AT1G18980	40.394	203	116	3	1	201	16	215	5.34e-40	136
MS.gene64427.t1	AT5G39120	40.566	212	115	5	1	201	5	216	1.30e-39	135
MS.gene64427.t1	AT1G02335	35.610	205	130	1	3	205	12	216	1.48e-39	135
MS.gene64427.t1	AT1G18970	40.394	203	115	3	3	201	15	215	3.30e-39	134
MS.gene64427.t1	AT3G05950	43.617	188	98	4	21	201	32	218	3.94e-39	134
MS.gene64427.t1	AT5G39150	40.094	212	116	5	1	201	5	216	1.20e-38	133
MS.gene64427.t1	AT3G04150	40.513	195	108	4	21	208	32	225	1.70e-38	132
MS.gene64427.t1	AT5G39180	40.094	212	116	5	1	201	5	216	1.76e-38	132
MS.gene64427.t1	AT3G04150	40.782	179	101	2	35	208	60	238	7.89e-38	131
MS.gene64427.t1	AT1G09560	44.068	177	97	1	6	182	17	191	1.13e-37	130
MS.gene64427.t1	AT5G61750	44.361	133	74	0	35	167	41	173	5.01e-37	128
MS.gene64427.t1	AT3G62020	38.235	170	102	2	35	201	14	183	6.47e-37	127
MS.gene64427.t1	AT5G26700	36.634	202	122	3	1	201	10	206	8.00e-37	128
MS.gene64427.t1	AT5G38940	45.695	151	78	2	21	167	32	182	9.88e-37	128
MS.gene64427.t1	AT5G38940	45.695	151	78	2	21	167	56	206	1.59e-36	128
MS.gene64427.t1	AT3G04190	43.293	164	87	3	21	179	32	194	3.50e-36	126
MS.gene64427.t1	AT5G39160	43.558	163	87	2	48	205	36	198	6.71e-36	125
MS.gene64427.t1	AT5G38930	45.695	151	78	2	21	167	32	182	6.92e-36	125
MS.gene64427.t1	AT5G39190	43.558	163	87	2	48	205	36	198	1.02e-35	125
MS.gene64427.t1	AT5G38910	41.584	202	104	6	12	201	17	216	5.02e-35	124
MS.gene64427.t1	AT3G04180	43.636	165	85	5	21	179	32	194	5.90e-35	123
MS.gene64427.t1	AT4G14630	39.362	188	107	3	21	201	32	219	5.97e-35	123
MS.gene64427.t1	AT3G04170	40.838	191	102	6	21	204	32	218	7.47e-35	123
MS.gene64427.t1	AT3G10080	36.508	189	114	2	19	202	30	217	2.59e-34	122
MS.gene64427.t1	AT3G05930	37.441	211	123	4	2	205	5	213	3.28e-34	121
MS.gene64427.t1	AT3G10080	36.508	189	114	2	19	202	101	288	1.01e-33	122
MS.gene64427.t1	AT1G10460	37.079	178	104	4	35	206	42	217	1.32e-32	117
MS.gene64427.t1	AT1G74820	42.568	148	83	1	9	156	30	175	1.30e-31	115
MS.gene64427.t1	AT5G38910	32.500	200	88	6	12	201	17	179	6.11e-16	73.2

Find 52 sgRNAs with CRISPR-Local

Find 54 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAGAACGACCAACATTAATT+TGG	0.178448	2.4:-48599579	None:intergenic
GAAGTATTGGTTGTTATTAA+AGG	0.278056	2.4:+48599457	MS.gene64427:CDS
TAATCCTCGTTTCCAGATAT+TGG	0.294879	2.4:+48599633	MS.gene64427:CDS
ACAAAGCGTAATCCAATATC+TGG	0.309210	2.4:-48599645	None:intergenic
TCATTCGCGGTTACCTTTGA+TGG	0.323535	2.4:-48599259	None:intergenic
AAGAAGCTTAAGCGTATTCT+TGG	0.334205	2.4:+48599730	MS.gene64427:CDS
ATAATGTTTGTGGTGTTTCC+AGG	0.358433	2.4:-48599307	None:intergenic
GAATATCCAGCTGGGCCATT+TGG	0.360878	2.4:-48599226	None:intergenic
GTTTGTGGTGTTTCCAGGTT+TGG	0.365839	2.4:-48599302	None:intergenic
TCACAATTTCCCGGTGTAAA+CGG	0.422953	2.4:+48599358	MS.gene64427:CDS
CCCCGGTGCTTCGGAAGTAT+TGG	0.434736	2.4:+48599444	MS.gene64427:CDS
TTTCCCGGTGTAAACGGTCT+TGG	0.446321	2.4:+48599364	MS.gene64427:CDS
AATGCACCAAATGGCCCAGC+TGG	0.454211	2.4:+48599220	MS.gene64427:CDS
TGGTGTTTCCAGGTTTGGCT+AGG	0.466107	2.4:-48599297	None:intergenic
AACCAATACTTCCGAAGCAC+CGG	0.468211	2.4:-48599446	None:intergenic
TCACACACACCCCGGTGCTT+CGG	0.471434	2.4:+48599435	MS.gene64427:CDS
GGCTATATCTAAACGCGCCA+TGG	0.483268	2.4:-48599392	None:intergenic
GCATTAGACTCACAATTTCC+CGG	0.483529	2.4:+48599349	MS.gene64427:CDS
ATTAAAGGAACAATCAGTGC+TGG	0.495019	2.4:+48599472	MS.gene64427:CDS
AGCGGCTTTGATAATGTTTG+TGG	0.500309	2.4:-48599317	None:intergenic
AAGCGTATTCTTGGAGGGAG+TGG	0.501763	2.4:+48599739	MS.gene64427:CDS
AAGCTTAAGCGTATTCTTGG+AGG	0.505606	2.4:+48599733	MS.gene64427:CDS
TACCACGGCCTAGCCAAACC+TGG	0.511494	2.4:+48599289	MS.gene64427:CDS
TTGCATTTCCAAATTAATGT+TGG	0.515849	2.4:+48599571	MS.gene64427:CDS
GGTTTGCAAGAATATCCAGC+TGG	0.520856	2.4:-48599235	None:intergenic
ACCAATACTTCCGAAGCACC+GGG	0.531532	2.4:-48599445	None:intergenic
GCAGATTACAATGCACCAAA+TGG	0.532463	2.4:+48599211	MS.gene64427:CDS
TTCTTGCAAACCACCATCAA+AGG	0.552457	2.4:+48599246	MS.gene64427:CDS
CGTTTAGATATAGCCGTTGG+TGG	0.560060	2.4:+48599400	MS.gene64427:CDS
TTCCAGGTTTGGCTAGGCCG+TGG	0.564543	2.4:-48599291	None:intergenic
TTCGCGGTTACCTTTGATGG+TGG	0.572308	2.4:-48599256	None:intergenic
AGCTTAAGCGTATTCTTGGA+GGG	0.573517	2.4:+48599734	MS.gene64427:CDS
AACGTAAACAACATTGTCAG+AGG	0.574065	2.4:-48599503	None:intergenic
ATTCCAAGACCGTTTACACC+GGG	0.600502	2.4:-48599367	None:intergenic
TGGAAATGCAACAATCCTTG+TGG	0.601071	2.4:-48599559	None:intergenic
GTTGCAGTAATGAACTCCGT+TGG	0.609003	2.4:-48599682	None:intergenic
TACGTTAAAACACTTCACAA+AGG	0.611341	2.4:+48599520	MS.gene64427:CDS
TGCTACGCAGAAATCTACTA+CGG	0.612239	2.4:-48599191	None:intergenic
GATTCCAAGACCGTTTACAC+CGG	0.616073	2.4:-48599368	None:intergenic
GCACCGGGGTGTGTGTGAAG+TGG	0.618194	2.4:-48599430	None:intergenic
GTGGTAGACGAAGTCATTCG+CGG	0.625632	2.4:-48599272	None:intergenic
AAACGGTCTTGGAATCTCCA+TGG	0.625728	2.4:+48599375	MS.gene64427:CDS
AAGTGGAATAACACCACCAA+CGG	0.630116	2.4:-48599413	None:intergenic
GTCTAATGCGGTGGTAACAG+CGG	0.634535	2.4:-48599335	None:intergenic
GTTTGCAAGAATATCCAGCT+GGG	0.638814	2.4:-48599234	None:intergenic
ATTCCACTTCACACACACCC+CGG	0.641125	2.4:+48599427	MS.gene64427:CDS
GCGCGTTTAGATATAGCCGT+TGG	0.647288	2.4:+48599397	MS.gene64427:CDS
GGGAAATTGTGAGTCTAATG+CGG	0.678656	2.4:-48599347	None:intergenic
TAATCCAATATCTGGAAACG+AGG	0.691373	2.4:-48599637	None:intergenic
AAATTGTGAGTCTAATGCGG+TGG	0.693385	2.4:-48599344	None:intergenic
GCGAATGACTTCGTCTACCA+CGG	0.705558	2.4:+48599274	MS.gene64427:CDS
CCAATACTTCCGAAGCACCG+GGG	0.761220	2.4:-48599444	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	TTGCATTTCCAAATTAATGT+TGG	+	chr2.4:48599571-48599590	MS.gene64427:CDS	25.0%
!!!	GAAGTATTGGTTGTTATTAA+AGG	+	chr2.4:48599457-48599476	MS.gene64427:CDS	25.0%
	TACGTTAAAACACTTCACAA+AGG	+	chr2.4:48599520-48599539	MS.gene64427:CDS	30.0%
	TAGAACGACCAACATTAATT+TGG	-	chr2.4:48599582-48599601	None:intergenic	30.0%
!	GATGTTATGATTTTTCCACA+AGG	+	chr2.4:48599544-48599563	MS.gene64427:CDS	30.0%
	AACGTAAACAACATTGTCAG+AGG	-	chr2.4:48599506-48599525	None:intergenic	35.0%
	AAGAAGCTTAAGCGTATTCT+TGG	+	chr2.4:48599730-48599749	MS.gene64427:CDS	35.0%
	ACAAAGCGTAATCCAATATC+TGG	-	chr2.4:48599648-48599667	None:intergenic	35.0%
	ATAATGTTTGTGGTGTTTCC+AGG	-	chr2.4:48599310-48599329	None:intergenic	35.0%
	ATTAAAGGAACAATCAGTGC+TGG	+	chr2.4:48599472-48599491	MS.gene64427:CDS	35.0%
	TAATCCAATATCTGGAAACG+AGG	-	chr2.4:48599640-48599659	None:intergenic	35.0%
	TAATCCTCGTTTCCAGATAT+TGG	+	chr2.4:48599633-48599652	MS.gene64427:CDS	35.0%
!	GTTTGAAAGCGATTTTCCAA+CGG	+	chr2.4:48599666-48599685	MS.gene64427:CDS	35.0%
	AAATTGTGAGTCTAATGCGG+TGG	-	chr2.4:48599347-48599366	None:intergenic	40.0%
	AAGCTTAAGCGTATTCTTGG+AGG	+	chr2.4:48599733-48599752	MS.gene64427:CDS	40.0%
	AAGTGGAATAACACCACCAA+CGG	-	chr2.4:48599416-48599435	None:intergenic	40.0%
	AGCTTAAGCGTATTCTTGGA+GGG	+	chr2.4:48599734-48599753	MS.gene64427:CDS	40.0%
	GCAGATTACAATGCACCAAA+TGG	+	chr2.4:48599211-48599230	MS.gene64427:CDS	40.0%
	GCATTAGACTCACAATTTCC+CGG	+	chr2.4:48599349-48599368	MS.gene64427:CDS	40.0%
	GGGAAATTGTGAGTCTAATG+CGG	-	chr2.4:48599350-48599369	None:intergenic	40.0%
	GTTTGCAAGAATATCCAGCT+GGG	-	chr2.4:48599237-48599256	None:intergenic	40.0%
	TCACAATTTCCCGGTGTAAA+CGG	+	chr2.4:48599358-48599377	MS.gene64427:CDS	40.0%
	TGCTACGCAGAAATCTACTA+CGG	-	chr2.4:48599194-48599213	None:intergenic	40.0%
	TGGAAATGCAACAATCCTTG+TGG	-	chr2.4:48599562-48599581	None:intergenic	40.0%
	TTCTTGCAAACCACCATCAA+AGG	+	chr2.4:48599246-48599265	MS.gene64427:CDS	40.0%
!!	AGCGGCTTTGATAATGTTTG+TGG	-	chr2.4:48599320-48599339	None:intergenic	40.0%
	AAACGGTCTTGGAATCTCCA+TGG	+	chr2.4:48599375-48599394	MS.gene64427:CDS	45.0%
	AACCAATACTTCCGAAGCAC+CGG	-	chr2.4:48599449-48599468	None:intergenic	45.0%
	ATTCCAAGACCGTTTACACC+GGG	-	chr2.4:48599370-48599389	None:intergenic	45.0%
	CGTTTAGATATAGCCGTTGG+TGG	+	chr2.4:48599400-48599419	MS.gene64427:CDS	45.0%
	GATTCCAAGACCGTTTACAC+CGG	-	chr2.4:48599371-48599390	None:intergenic	45.0%
	GGTTTGCAAGAATATCCAGC+TGG	-	chr2.4:48599238-48599257	None:intergenic	45.0%
	GTTGCAGTAATGAACTCCGT+TGG	-	chr2.4:48599685-48599704	None:intergenic	45.0%
	GTTTGTGGTGTTTCCAGGTT+TGG	-	chr2.4:48599305-48599324	None:intergenic	45.0%
	TCATTCGCGGTTACCTTTGA+TGG	-	chr2.4:48599262-48599281	None:intergenic	45.0%
	AAGCGTATTCTTGGAGGGAG+TGG	+	chr2.4:48599739-48599758	MS.gene64427:CDS	50.0%
	ATTCCACTTCACACACACCC+CGG	+	chr2.4:48599427-48599446	MS.gene64427:CDS	50.0%
	GAATATCCAGCTGGGCCATT+TGG	-	chr2.4:48599229-48599248	None:intergenic	50.0%
	GCGAATGACTTCGTCTACCA+CGG	+	chr2.4:48599274-48599293	MS.gene64427:CDS	50.0%
	GCGCGTTTAGATATAGCCGT+TGG	+	chr2.4:48599397-48599416	MS.gene64427:CDS	50.0%
	GGCTATATCTAAACGCGCCA+TGG	-	chr2.4:48599395-48599414	None:intergenic	50.0%
	GTCTAATGCGGTGGTAACAG+CGG	-	chr2.4:48599338-48599357	None:intergenic	50.0%
	GTGGTAGACGAAGTCATTCG+CGG	-	chr2.4:48599275-48599294	None:intergenic	50.0%
	TGGTGTTTCCAGGTTTGGCT+AGG	-	chr2.4:48599300-48599319	None:intergenic	50.0%
	TTCGCGGTTACCTTTGATGG+TGG	-	chr2.4:48599259-48599278	None:intergenic	50.0%
	TTTCCCGGTGTAAACGGTCT+TGG	+	chr2.4:48599364-48599383	MS.gene64427:CDS	50.0%
!	ACCAATACTTCCGAAGCACC+GGG	-	chr2.4:48599448-48599467	None:intergenic	50.0%
	AATGCACCAAATGGCCCAGC+TGG	+	chr2.4:48599220-48599239	MS.gene64427:CDS	55.0%
!!	CCAATACTTCCGAAGCACCG+GGG	-	chr2.4:48599447-48599466	None:intergenic	55.0%
	TACCACGGCCTAGCCAAACC+TGG	+	chr2.4:48599289-48599308	MS.gene64427:CDS	60.0%
	TCACACACACCCCGGTGCTT+CGG	+	chr2.4:48599435-48599454	MS.gene64427:CDS	60.0%
	TTCCAGGTTTGGCTAGGCCG+TGG	-	chr2.4:48599294-48599313	None:intergenic	60.0%
!	CCCCGGTGCTTCGGAAGTAT+TGG	+	chr2.4:48599444-48599463	MS.gene64427:CDS	60.0%
	GCACCGGGGTGTGTGTGAAG+TGG	-	chr2.4:48599433-48599452	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr2.4	gene	48599139	48599765	48599139	ID=MS.gene64427
chr2.4	mRNA	48599139	48599765	48599139	ID=MS.gene64427.t1;Parent=MS.gene64427
chr2.4	exon	48599139	48599765	48599139	ID=MS.gene64427.t1.exon1;Parent=MS.gene64427.t1
chr2.4	CDS	48599139	48599765	48599139	ID=cds.MS.gene64427.t1;Parent=MS.gene64427.t1

Gene Sequence

>MS.gene64427

ATGATTCTAACTATCTTCTTCATTTTTTCTCTTCTTTCACTTTCTCATGCATCCGTAGTAGATTTCTGCGTAGCAGATTACAATGCACCAAATGGCCCAGCTGGATATTCTTGCAAACCACCATCAAAGGTAACCGCGAATGACTTCGTCTACCACGGCCTAGCCAAACCTGGAAACACCACAAACATTATCAAAGCCGCTGTTACCACCGCATTAGACTCACAATTTCCCGGTGTAAACGGTCTTGGAATCTCCATGGCGCGTTTAGATATAGCCGTTGGTGGTGTTATTCCACTTCACACACACCCCGGTGCTTCGGAAGTATTGGTTGTTATTAAAGGAACAATCAGTGCTGGTTTTGTTTCCTCTGACAATGTTGTTTACGTTAAAACACTTCACAAAGGTGATGTTATGATTTTTCCACAAGGATTGTTGCATTTCCAAATTAATGTTGGTCGTTCTAATGCACTTACTTTTAATAGCTTTAGTAGTGCTAATCCTCGTTTCCAGATATTGGATTACGCTTTGTTTGAAAGCGATTTTCCAACGGAGTTCATTACTGCAACAACTTTTCTTGATGCTGCTGTAGTGAAGAAGCTTAAGCGTATTCTTGGAGGGAGTGGTTAA

Protein sequence

>MS.gene64427.t1

MILTIFFIFSLLSLSHASVVDFCVADYNAPNGPAGYSCKPPSKVTANDFVYHGLAKPGNTTNIIKAAVTTALDSQFPGVNGLGISMARLDIAVGGVIPLHTHPGASEVLVVIKGTISAGFVSSDNVVYVKTLHKGDVMIFPQGLLHFQINVGRSNALTFNSFSSANPRFQILDYALFESDFPTEFITATTFLDAAVVKKLKRILGGSG