Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64767.t1 | XP_003612170.2 | 87 | 431 | 50 | 3 | 1 | 427 | 11 | 439 | 1.20E-136 | 496.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64767.t1 | Q05753 | 44.1 | 279 | 143 | 4 | 13 | 280 | 7 | 283 | 1.4e-56 | 221.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64767.t1 | G7JW80 | 87.0 | 431 | 50 | 3 | 1 | 427 | 1 | 429 | 8.9e-137 | 496.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene64767 | 0.804671 | 1.93E-49 | -1.69E-46 |
| MS.gene051471 | MS.gene64767 | 0.811239 | 7.73E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene64767 | 0.843531 | 1.32E-58 | -1.69E-46 |
| MS.gene052322 | MS.gene64767 | 0.804785 | 1.83E-49 | -1.69E-46 |
| MS.gene053928 | MS.gene64767 | 0.815496 | 8.97E-52 | -1.69E-46 |
| MS.gene055277 | MS.gene64767 | 0.812189 | 4.80E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene64767 | 0.82407 | 9.85E-54 | -1.69E-46 |
| MS.gene057439 | MS.gene64767 | 0.809534 | 1.80E-50 | -1.69E-46 |
| MS.gene058993 | MS.gene64767 | 0.825556 | 4.40E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene64767 | 0.803049 | 4.20E-49 | -1.69E-46 |
| MS.gene059894 | MS.gene64767 | 0.803149 | 4.00E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene64767 | 0.801372 | 9.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64767.t1 | MTR_5g022050 | 93.271 | 431 | 23 | 3 | 1 | 427 | 1 | 429 | 0.0 | 774 |
| MS.gene64767.t1 | MTR_5g023090 | 76.096 | 456 | 66 | 7 | 1 | 416 | 1 | 453 | 0.0 | 639 |
| MS.gene64767.t1 | MTR_5g022050 | 93.296 | 358 | 18 | 3 | 1 | 354 | 11 | 366 | 0.0 | 632 |
| MS.gene64767.t1 | MTR_2g048680 | 46.154 | 182 | 97 | 1 | 233 | 413 | 123 | 304 | 3.01e-52 | 177 |
| MS.gene64767.t1 | MTR_2g048680 | 47.853 | 163 | 85 | 0 | 251 | 413 | 62 | 224 | 8.75e-50 | 169 |
| MS.gene64767.t1 | MTR_5g043640 | 32.353 | 136 | 92 | 0 | 258 | 393 | 91 | 226 | 2.10e-16 | 79.0 |
| MS.gene64767.t1 | MTR_5g043640 | 31.618 | 136 | 90 | 1 | 261 | 393 | 58 | 193 | 8.31e-15 | 74.3 |
| MS.gene64767.t1 | MTR_5g026800 | 30.657 | 137 | 94 | 1 | 261 | 396 | 15 | 151 | 5.20e-14 | 72.4 |
| MS.gene64767.t1 | MTR_4g092760 | 29.240 | 171 | 113 | 3 | 233 | 402 | 40 | 203 | 3.09e-12 | 68.6 |
| MS.gene64767.t1 | MTR_5g077770 | 35.714 | 154 | 93 | 2 | 260 | 413 | 591 | 738 | 6.84e-12 | 68.2 |
| MS.gene64767.t1 | MTR_6g027840 | 28.108 | 185 | 131 | 2 | 242 | 425 | 195 | 378 | 1.16e-11 | 67.0 |
| MS.gene64767.t1 | MTR_7g020860 | 38.095 | 84 | 52 | 0 | 322 | 405 | 739 | 822 | 1.17e-11 | 67.4 |
| MS.gene64767.t1 | MTR_7g115280 | 27.632 | 152 | 108 | 2 | 249 | 400 | 114 | 263 | 1.60e-11 | 66.2 |
| MS.gene64767.t1 | MTR_4g113530 | 32.353 | 136 | 89 | 2 | 261 | 395 | 555 | 688 | 2.30e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64767.t1 | AT5G66055 | 52.969 | 421 | 184 | 5 | 13 | 421 | 7 | 425 | 2.63e-150 | 434 |
| MS.gene64767.t1 | AT5G66055 | 49.859 | 355 | 165 | 4 | 13 | 356 | 7 | 359 | 9.93e-114 | 338 |
| MS.gene64767.t1 | AT5G40160 | 47.253 | 182 | 95 | 1 | 233 | 413 | 127 | 308 | 1.61e-52 | 179 |
| MS.gene64767.t1 | AT5G40160 | 46.795 | 156 | 82 | 1 | 233 | 387 | 127 | 282 | 2.02e-43 | 154 |
| MS.gene64767.t1 | AT2G25600 | 32.192 | 146 | 96 | 2 | 261 | 405 | 581 | 724 | 1.37e-12 | 70.5 |
| MS.gene64767.t1 | AT4G27780 | 39.241 | 79 | 48 | 0 | 318 | 396 | 261 | 339 | 2.06e-12 | 68.6 |
| MS.gene64767.t1 | AT2G03430 | 29.710 | 138 | 97 | 0 | 256 | 393 | 82 | 219 | 4.71e-12 | 66.2 |
| MS.gene64767.t1 | AT2G14255 | 31.333 | 150 | 100 | 2 | 249 | 395 | 83 | 232 | 1.00e-11 | 67.0 |
| MS.gene64767.t1 | AT5G53470 | 31.683 | 101 | 67 | 1 | 298 | 396 | 224 | 324 | 2.36e-11 | 65.1 |
| MS.gene64767.t1 | AT4G19150 | 25.466 | 161 | 115 | 2 | 261 | 420 | 20 | 176 | 2.72e-11 | 63.9 |
| MS.gene64767.t1 | AT5G13300 | 32.673 | 101 | 66 | 1 | 312 | 412 | 718 | 816 | 5.16e-11 | 65.5 |
Find 85 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCATTAATTGTAGGATAAA+TGG | 0.168217 | 5.2:+13221295 | MS.gene64767:intron |
| TTCTTCTTTGAAATTGGTTT+TGG | 0.193195 | 5.2:-13219476 | None:intergenic |
| GTGAAGCTTCTGCTGATTAA+AGG | 0.208288 | 5.2:+13222334 | MS.gene64767:CDS |
| AATCCTAGATGGGCTGTTTA+TGG | 0.219355 | 5.2:+13219803 | MS.gene64767:CDS |
| CAGTTGAAGCCTTTGGTTCT+TGG | 0.229120 | 5.2:+13219707 | MS.gene64767:CDS |
| AGAATCTTGTTCCTGATAAA+TGG | 0.230329 | 5.2:+13219522 | MS.gene64767:CDS |
| GTTGATTCCTTTGAGGGATA+TGG | 0.236009 | 5.2:+13219643 | MS.gene64767:CDS |
| TGAACTTCTTTCCATTTATC+AGG | 0.246691 | 5.2:-13219533 | None:intergenic |
| GCTCTTTACAAAGCGGTAAT+TGG | 0.259504 | 5.2:+13221506 | MS.gene64767:CDS |
| GGCTTATAAAGAAGCTAAAT+TGG | 0.277637 | 5.2:+13219682 | MS.gene64767:CDS |
| TATGGATTTGAATGAGTATA+AGG | 0.293852 | 5.2:+13219661 | MS.gene64767:CDS |
| AAGAAGAGTGTGTGGGGTTG+AGG | 0.315484 | 5.2:-13219239 | None:intergenic |
| GTCTGTCGGGAGCGTCTATA+AGG | 0.356780 | 5.2:-13223590 | None:intergenic |
| GACTCTGCTGCTATGAAAAC+TGG | 0.356814 | 5.2:+13219872 | MS.gene64767:CDS |
| ATTGGCTCAGTTGAAGCCTT+TGG | 0.368198 | 5.2:+13219700 | MS.gene64767:CDS |
| TGATGTTGATATTAATGTTA+TGG | 0.368619 | 5.2:+13221380 | MS.gene64767:CDS |
| CAATGTGGATATAAATCTTC+AGG | 0.373575 | 5.2:+13222164 | MS.gene64767:CDS |
| TGATATTAATGTTATGGATA+AGG | 0.387981 | 5.2:+13221386 | MS.gene64767:CDS |
| ATCCTAGATGGGCTGTTTAT+GGG | 0.393025 | 5.2:+13219804 | MS.gene64767:CDS |
| TCTCAAGAGACAGTTGGTTA+TGG | 0.396572 | 5.2:-13221540 | None:intergenic |
| TAGTGCCTAGGAATCCTAGA+TGG | 0.397952 | 5.2:+13219792 | MS.gene64767:CDS |
| ACAAGAGTACTTTAATTGTT+CGG | 0.397986 | 5.2:-13222137 | None:intergenic |
| CTCACATTATCTTGCACAAA+CGG | 0.408366 | 5.2:-13221575 | None:intergenic |
| GAAGCCTTTGGTTCTTGGTA+AGG | 0.419470 | 5.2:+13219712 | MS.gene64767:CDS |
| AGATGGGCTGTTTATGGGAG+AGG | 0.423749 | 5.2:+13219809 | MS.gene64767:CDS |
| TTGCTCTGTCTTAGGATGGC+TGG | 0.424376 | 5.2:+13222269 | MS.gene64767:intron |
| TTCTTCTTATCCCCGTCTGT+CGG | 0.435105 | 5.2:-13223604 | None:intergenic |
| AAGAGGGTTGATTCCTTTGA+GGG | 0.442733 | 5.2:+13219637 | MS.gene64767:CDS |
| CGGAGACTGTCTTGTCTTCG+AGG | 0.443191 | 5.2:+13219391 | MS.gene64767:CDS |
| AAAGAGGGTTGATTCCTTTG+AGG | 0.450936 | 5.2:+13219636 | MS.gene64767:CDS |
| TCTTCTTATCCCCGTCTGTC+GGG | 0.451834 | 5.2:-13223603 | None:intergenic |
| GTCGTCCTAGGTTGTTTACC+AGG | 0.463875 | 5.2:+13220942 | MS.gene64767:CDS |
| ACGAGGTTGTTGTCGGAAGT+TGG | 0.464298 | 5.2:-13219440 | None:intergenic |
| AAAGTTATGAAGAAGAAAAG+AGG | 0.482187 | 5.2:+13219620 | MS.gene64767:CDS |
| ACAGCCCATCTAGGATTCCT+AGG | 0.499470 | 5.2:-13219797 | None:intergenic |
| TTTATCAGGAACAAGATTCT+CGG | 0.500203 | 5.2:-13219519 | None:intergenic |
| GTTGTTTACGAGGTTGTTGT+CGG | 0.500244 | 5.2:-13219447 | None:intergenic |
| CTCGACCTTTGTCTTTACTC+TGG | 0.503885 | 5.2:+13223524 | MS.gene64767:CDS |
| CTCCCATAAACAGCCCATCT+AGG | 0.507590 | 5.2:-13219806 | None:intergenic |
| GTTGTTTACCAGGGAGGAGA+GGG | 0.513400 | 5.2:+13220952 | MS.gene64767:CDS |
| CGAGGTGTGGAAGAAGAAGA+AGG | 0.515004 | 5.2:-13219272 | None:intergenic |
| CTTCGTAGTTGTTGTCATGT+TGG | 0.515970 | 5.2:-13219358 | None:intergenic |
| AAGTTATGAAGAAGAAAAGA+GGG | 0.517219 | 5.2:+13219621 | MS.gene64767:CDS |
| AGGTGGGTTGAGTGATGAGA+GGG | 0.518172 | 5.2:+13219769 | MS.gene64767:CDS |
| GAAGTAGCAACTGACAAGTC+TGG | 0.525281 | 5.2:-13220995 | None:intergenic |
| ATGGAGAGAAGAAGAGTGTG+TGG | 0.526930 | 5.2:-13219247 | None:intergenic |
| TGGAGAGAAGAAGAGTGTGT+GGG | 0.527588 | 5.2:-13219246 | None:intergenic |
| GACTGTCTTGTCTTCGAGGA+AGG | 0.528284 | 5.2:+13219395 | MS.gene64767:CDS |
| TGTTTATGGGAGAGGTTTCG+AGG | 0.529560 | 5.2:+13219817 | MS.gene64767:CDS |
| GAGGATGATGAAGAAGAAGA+AGG | 0.531032 | 5.2:+13219749 | MS.gene64767:CDS |
| GTGGAAGAAGAAGAAGGGAA+TGG | 0.538458 | 5.2:-13219266 | None:intergenic |
| GATGATGAAGAAGAAGAAGG+TGG | 0.541756 | 5.2:+13219752 | MS.gene64767:CDS |
| GAGGTGTGGAAGAAGAAGAA+GGG | 0.544958 | 5.2:-13219271 | None:intergenic |
| TATAGACGCTCCCGACAGAC+GGG | 0.545707 | 5.2:+13223593 | MS.gene64767:CDS |
| CGAGTTTCTCAAGAGACAGT+TGG | 0.550055 | 5.2:-13221546 | None:intergenic |
| CAACAAATCCCTCTCCTCCC+TGG | 0.550164 | 5.2:-13220960 | None:intergenic |
| GTCTGAACAGCAAGATGTAA+TGG | 0.552014 | 5.2:-13222295 | None:intergenic |
| ATGATGAAGAAGAAGAAGGT+GGG | 0.557970 | 5.2:+13219753 | MS.gene64767:CDS |
| AAGGTGGGTTGAGTGATGAG+AGG | 0.562680 | 5.2:+13219768 | MS.gene64767:CDS |
| TTGAGGATTATGAACAAGTG+TGG | 0.587692 | 5.2:-13219222 | None:intergenic |
| TTCAAATCCATATCCCTCAA+AGG | 0.588549 | 5.2:-13219650 | None:intergenic |
| AGTGCCTAGGAATCCTAGAT+GGG | 0.592539 | 5.2:+13219793 | MS.gene64767:CDS |
| AGATTGAAACTTGCGAGGTG+TGG | 0.593440 | 5.2:-13219285 | None:intergenic |
| TTATAGACGCTCCCGACAGA+CGG | 0.598131 | 5.2:+13223592 | MS.gene64767:CDS |
| GGTTGTTTACCAGGGAGGAG+AGG | 0.600499 | 5.2:+13220951 | MS.gene64767:CDS |
| TCGTCCTAGGTTGTTTACCA+GGG | 0.600545 | 5.2:+13220943 | MS.gene64767:CDS |
| AGTACTCTTGTTGTACAATG+TGG | 0.602365 | 5.2:+13222149 | MS.gene64767:CDS |
| GAGTAAAGACAAAGGTCGAG+TGG | 0.605348 | 5.2:-13223521 | None:intergenic |
| AATTACCGCTTTGTAAAGAG+CGG | 0.611856 | 5.2:-13221504 | None:intergenic |
| TAAACATAACGAAGAAAGAA+CGG | 0.615305 | 5.2:+13219564 | MS.gene64767:CDS |
| GTGATGAGAGGGTAGTGCCT+AGG | 0.618143 | 5.2:+13219780 | MS.gene64767:CDS |
| TGAAAAGATTGAAACTTGCG+AGG | 0.619228 | 5.2:-13219290 | None:intergenic |
| CTTGCAGCAAAAGTGTGCAA+AGG | 0.619949 | 5.2:-13221321 | None:intergenic |
| CAACTGTCTCTTGAGAAACT+CGG | 0.628903 | 5.2:+13221547 | MS.gene64767:CDS |
| TCCTAGGTTGTTTACCAGGG+AGG | 0.641807 | 5.2:+13220946 | MS.gene64767:CDS |
| GGAGAGAAGAAGAGTGTGTG+GGG | 0.642297 | 5.2:-13219245 | None:intergenic |
| TTGTACAGCATAGTGCATCA+AGG | 0.649508 | 5.2:-13222103 | None:intergenic |
| AACTACGAAGAACACATCAT+CGG | 0.651971 | 5.2:+13219371 | MS.gene64767:CDS |
| TCCTCCCTGGTAAACAACCT+AGG | 0.653160 | 5.2:-13220947 | None:intergenic |
| AAAACCTTACCAAGAACCAA+AGG | 0.660134 | 5.2:-13219716 | None:intergenic |
| ATAGACGCTCCCGACAGACG+GGG | 0.691778 | 5.2:+13223594 | MS.gene64767:CDS |
| TTTGACCAGAGTAAAGACAA+AGG | 0.694612 | 5.2:-13223529 | None:intergenic |
| TTTGACCGCTCTTTACAAAG+CGG | 0.710243 | 5.2:+13221499 | MS.gene64767:CDS |
| TACAGCATAGTGCATCAAGG+TGG | 0.722597 | 5.2:-13222100 | None:intergenic |
| TCTGCTGCTATGAAAACTGG+AGG | 0.737144 | 5.2:+13219875 | MS.gene64767:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATTTATAAAATAGAAG+CGG | + | chr5.2:13222702-13222721 | MS.gene64767:intron | 10.0% |
| !! | AACTATATGTTAATAGATTA+AGG | - | chr5.2:13222000-13222019 | None:intergenic | 15.0% |
| !! | ACTATATGTTAATAGATTAA+GGG | - | chr5.2:13221999-13222018 | None:intergenic | 15.0% |
| !! | ATAATTTATAAAATAGAAGC+GGG | + | chr5.2:13222703-13222722 | MS.gene64767:intron | 15.0% |
| !! | TTACATTGATAGATTAATAT+AGG | - | chr5.2:13222403-13222422 | None:intergenic | 15.0% |
| !! | AAAAAAGGGAAAAAATACAA+TGG | - | chr5.2:13222527-13222546 | None:intergenic | 20.0% |
| !! | AAAAAGGGAAAAAATACAAT+GGG | - | chr5.2:13222526-13222545 | None:intergenic | 20.0% |
| !! | AAAACTAAAAGTTGTTACAT+AGG | - | chr5.2:13219963-13219982 | None:intergenic | 20.0% |
| !! | AAACACAATAGTTTAAATAG+AGG | - | chr5.2:13221457-13221476 | None:intergenic | 20.0% |
| !! | AAATATCACTGTAAAAGAAA+TGG | - | chr5.2:13223460-13223479 | None:intergenic | 20.0% |
| !! | AACTAAATATTCATCAATCA+CGG | - | chr5.2:13223272-13223291 | None:intergenic | 20.0% |
| !! | ATGAAAAAGTTGAGATATAA+AGG | + | chr5.2:13220594-13220613 | MS.gene64767:intron | 20.0% |
| !! | CATGAATACTAATTTATACA+CGG | + | chr5.2:13221411-13221430 | MS.gene64767:intron | 20.0% |
| !! | TAACAGTACAAAATATAATG+AGG | - | chr5.2:13221072-13221091 | None:intergenic | 20.0% |
| !! | TAGCCTTTCAAAAAAAAAAA+GGG | + | chr5.2:13222595-13222614 | MS.gene64767:intron | 20.0% |
| !! | TCTTCATAGATTATTGTTTA+GGG | + | chr5.2:13220241-13220260 | MS.gene64767:intron | 20.0% |
| !! | TGATATTAATGTTATGGATA+AGG | + | chr5.2:13221386-13221405 | MS.gene64767:CDS | 20.0% |
| !! | TGATCAGAAATTAAAAAACA+AGG | + | chr5.2:13222360-13222379 | MS.gene64767:CDS | 20.0% |
| !! | TGATGTTGATATTAATGTTA+TGG | + | chr5.2:13221380-13221399 | MS.gene64767:CDS | 20.0% |
| !!! | AAAACTTTCAACTGTTATTT+AGG | + | chr5.2:13223054-13223073 | MS.gene64767:intron | 20.0% |
| !!! | AATTCTTTAGAAAATAGAAG+TGG | + | chr5.2:13222835-13222854 | MS.gene64767:intron | 20.0% |
| !!! | ATATCATAATATTTTGTCTG+TGG | + | chr5.2:13223355-13223374 | MS.gene64767:intron | 20.0% |
| !!! | ATTATATTTTGTACTGTTAC+TGG | + | chr5.2:13221073-13221092 | MS.gene64767:intron | 20.0% |
| !!! | ATTTTTTTTTTATCCAAGCA+TGG | - | chr5.2:13223136-13223155 | None:intergenic | 20.0% |
| !!! | CTCTATATTTATGTTTTCAA+CGG | + | chr5.2:13221266-13221285 | MS.gene64767:intron | 20.0% |
| !!! | TATTTTTGTTAATTCTGTTG+AGG | + | chr5.2:13219927-13219946 | MS.gene64767:intron | 20.0% |
| !!! | TGTTGGTTAAAACAAATTTA+TGG | + | chr5.2:13220516-13220535 | MS.gene64767:intron | 20.0% |
| !!! | TGTTTTGTTTTACTTTTTCA+AGG | + | chr5.2:13221472-13221491 | MS.gene64767:intron | 20.0% |
| !!! | TTAGCCTTTCAAAAAAAAAA+AGG | + | chr5.2:13222594-13222613 | MS.gene64767:intron | 20.0% |
| !!! | TTCTTTTTCTTCTTTGAAAT+TGG | - | chr5.2:13219485-13219504 | None:intergenic | 20.0% |
| !!! | TTGAATATAGATGCTTTTAA+CGG | + | chr5.2:13222451-13222470 | MS.gene64767:intron | 20.0% |
| !!! | TTTTTTTTTTATCCAAGCAT+GGG | - | chr5.2:13223135-13223154 | None:intergenic | 20.0% |
| ! | AAAGTTATGAAGAAGAAAAG+AGG | + | chr5.2:13219620-13219639 | MS.gene64767:CDS | 25.0% |
| ! | AAGTTATGAAGAAGAAAAGA+GGG | + | chr5.2:13219621-13219640 | MS.gene64767:CDS | 25.0% |
| ! | AATATGCTGAAAACAACTTA+TGG | + | chr5.2:13221866-13221885 | MS.gene64767:intron | 25.0% |
| ! | ATATAGAGATTACTTATCGA+AGG | - | chr5.2:13221254-13221273 | None:intergenic | 25.0% |
| ! | CTAAGTCATTAAAAACCTAT+CGG | + | chr5.2:13223021-13223040 | MS.gene64767:intron | 25.0% |
| ! | CTCATTAATTGTAGGATAAA+TGG | + | chr5.2:13221295-13221314 | MS.gene64767:intron | 25.0% |
| ! | CTCTTCATAGATTATTGTTT+AGG | + | chr5.2:13220240-13220259 | MS.gene64767:intron | 25.0% |
| ! | GTAAGAAAATCAACAGATAA+AGG | - | chr5.2:13221646-13221665 | None:intergenic | 25.0% |
| ! | TAAACATAACGAAGAAAGAA+CGG | + | chr5.2:13219564-13219583 | MS.gene64767:CDS | 25.0% |
| ! | TATGGATTTGAATGAGTATA+AGG | + | chr5.2:13219661-13219680 | MS.gene64767:CDS | 25.0% |
| ! | TCAAAAAAAAAAAGGGTCAT+TGG | + | chr5.2:13222602-13222621 | MS.gene64767:intron | 25.0% |
| ! | TTACTTCAACATCAAAACAA+AGG | - | chr5.2:13221121-13221140 | None:intergenic | 25.0% |
| ! | TTCTCATTGTTTGCAATATA+TGG | + | chr5.2:13220869-13220888 | MS.gene64767:intron | 25.0% |
| ! | TTTGAAAAATAAGTGTGGTT+TGG | + | chr5.2:13220469-13220488 | MS.gene64767:intron | 25.0% |
| !! | ACATGTATTCTTTAGAAAAC+AGG | + | chr5.2:13222899-13222918 | MS.gene64767:intron | 25.0% |
| !! | TATTCATTGATGGTTAAATC+CGG | + | chr5.2:13220819-13220838 | MS.gene64767:intron | 25.0% |
| !! | TGAATATAGATGCTTTTAAC+GGG | + | chr5.2:13222452-13222471 | MS.gene64767:intron | 25.0% |
| !! | TGAATATAGGTGCTTTTAAT+GGG | + | chr5.2:13222727-13222746 | MS.gene64767:intron | 25.0% |
| !! | TGGATCATTTTATTCATTGA+TGG | + | chr5.2:13220809-13220828 | MS.gene64767:intron | 25.0% |
| !!! | ACAAGAGTACTTTAATTGTT+CGG | - | chr5.2:13222140-13222159 | None:intergenic | 25.0% |
| !!! | GACATTTTGAAAAATAAGTG+TGG | + | chr5.2:13220464-13220483 | MS.gene64767:intron | 25.0% |
| !!! | TACTTTTAGAATCTTTGTTG+CGG | + | chr5.2:13221355-13221374 | MS.gene64767:CDS | 25.0% |
| !!! | TATGCTTGTTAGATAACTTT+TGG | + | chr5.2:13220385-13220404 | MS.gene64767:intron | 25.0% |
| !!! | TGACCCTTTTTTTTTTTGAA+AGG | - | chr5.2:13222601-13222620 | None:intergenic | 25.0% |
| !!! | TGGATTTGCTTTTGATTTAT+GGG | + | chr5.2:13220489-13220508 | MS.gene64767:intron | 25.0% |
| !!! | TGTTGCATTTTTTTCAATGT+TGG | + | chr5.2:13221183-13221202 | MS.gene64767:intron | 25.0% |
| !!! | TTCTTCTTTGAAATTGGTTT+TGG | - | chr5.2:13219479-13219498 | None:intergenic | 25.0% |
| !!! | TTGGATTTGCTTTTGATTTA+TGG | + | chr5.2:13220488-13220507 | MS.gene64767:intron | 25.0% |
| !!! | TTGTTTTACTTTTTCAAGGA+TGG | + | chr5.2:13221476-13221495 | MS.gene64767:intron | 25.0% |
| AAAAAACTCGCGGATAAAAA+AGG | - | chr5.2:13222542-13222561 | None:intergenic | 30.0% | |
| AAAAACTCGCGGATAAAAAA+GGG | - | chr5.2:13222541-13222560 | None:intergenic | 30.0% | |
| AAAGAAGAAAAAGAAGACAG+TGG | + | chr5.2:13219490-13219509 | MS.gene64767:CDS | 30.0% | |
| AAATTCATTTGCTCTGTCTT+AGG | + | chr5.2:13222261-13222280 | MS.gene64767:intron | 30.0% | |
| AAGCAAATGCATAGAATATC+AGG | - | chr5.2:13222050-13222069 | None:intergenic | 30.0% | |
| AGAATCTTGTTCCTGATAAA+TGG | + | chr5.2:13219522-13219541 | MS.gene64767:CDS | 30.0% | |
| ATCCAAAATGGCTCTTAAAT+TGG | + | chr5.2:13220719-13220738 | MS.gene64767:intron | 30.0% | |
| CAATGTGGATATAAATCTTC+AGG | + | chr5.2:13222164-13222183 | MS.gene64767:CDS | 30.0% | |
| CTTAAGAACCAGTTAATGAA+AGG | + | chr5.2:13222944-13222963 | MS.gene64767:intron | 30.0% | |
| GAAATTCGATTGTGATGAAA+TGG | + | chr5.2:13220789-13220808 | MS.gene64767:intron | 30.0% | |
| GCATAAAATGAATATCTTCC+CGG | - | chr5.2:13220841-13220860 | None:intergenic | 30.0% | |
| GGCTAATACTCATTAATTGT+AGG | + | chr5.2:13221287-13221306 | MS.gene64767:intron | 30.0% | |
| GGCTTATAAAGAAGCTAAAT+TGG | + | chr5.2:13219682-13219701 | MS.gene64767:CDS | 30.0% | |
| TGAACTTCTTTCCATTTATC+AGG | - | chr5.2:13219536-13219555 | None:intergenic | 30.0% | |
| TGACACAATAATCTATGAAG+CGG | - | chr5.2:13220103-13220122 | None:intergenic | 30.0% | |
| TGATAACAATGATGAATTCC+CGG | - | chr5.2:13221702-13221721 | None:intergenic | 30.0% | |
| TGTTTATATTGCCATCCATT+AGG | - | chr5.2:13220767-13220786 | None:intergenic | 30.0% | |
| TTAAATGTAACCTCATGTGT+TGG | + | chr5.2:13222858-13222877 | MS.gene64767:intron | 30.0% | |
| TTATATCCTTAGTTACCTGT+TGG | + | chr5.2:13222021-13222040 | MS.gene64767:intron | 30.0% | |
| TTGGAGAAGTTTATCCAAAA+TGG | + | chr5.2:13220707-13220726 | MS.gene64767:intron | 30.0% | |
| TTTATCAGGAACAAGATTCT+CGG | - | chr5.2:13219522-13219541 | None:intergenic | 30.0% | |
| ! | ATTCATTGATGGTTAAATCC+GGG | + | chr5.2:13220820-13220839 | MS.gene64767:intron | 30.0% |
| ! | CGATAGGTTTTTAATGACTT+AGG | - | chr5.2:13223023-13223042 | None:intergenic | 30.0% |
| ! | CTGAATATAGGTGCTTTTAA+TGG | + | chr5.2:13222726-13222745 | MS.gene64767:intron | 30.0% |
| ! | CTTTCATTAACTGGTTCTTA+AGG | - | chr5.2:13222946-13222965 | None:intergenic | 30.0% |
| ! | GAATCATAATAGAAGTGTAG+GGG | + | chr5.2:13221205-13221224 | MS.gene64767:intron | 30.0% |
| ! | GGAATCATAATAGAAGTGTA+GGG | + | chr5.2:13221204-13221223 | MS.gene64767:intron | 30.0% |
| ! | TAATAGATTAAGGGCATGTT+TGG | - | chr5.2:13221990-13222009 | None:intergenic | 30.0% |
| ! | TCTCTTCAGATAAGTGTTTT+TGG | + | chr5.2:13220688-13220707 | MS.gene64767:intron | 30.0% |
| ! | TCTTTCATGCTTTTGTGTAT+AGG | + | chr5.2:13220920-13220939 | MS.gene64767:intron | 30.0% |
| ! | TGAATTTTGTTCTCAAACAG+TGG | - | chr5.2:13222248-13222267 | None:intergenic | 30.0% |
| ! | TGGAATCATAATAGAAGTGT+AGG | + | chr5.2:13221203-13221222 | MS.gene64767:intron | 30.0% |
| ! | TTTCTTAGCCTTTCATTAAC+TGG | - | chr5.2:13222955-13222974 | None:intergenic | 30.0% |
| !! | ATTTGTCTTTTGTTTGTCTC+AGG | + | chr5.2:13223487-13223506 | MS.gene64767:intron | 30.0% |
| !! | GGCTTTGATTGAATTTGTTT+TGG | + | chr5.2:13223244-13223263 | MS.gene64767:intron | 30.0% |
| !! | TATGAAATGTATTGGTGTCA+GGG | + | chr5.2:13220127-13220146 | MS.gene64767:intron | 30.0% |
| !!! | TTGGTTTTTTGTTGTTTACG+AGG | - | chr5.2:13219460-13219479 | None:intergenic | 30.0% |
| AAAACCTTACCAAGAACCAA+AGG | - | chr5.2:13219719-13219738 | None:intergenic | 35.0% | |
| AACTACGAAGAACACATCAT+CGG | + | chr5.2:13219371-13219390 | MS.gene64767:CDS | 35.0% | |
| AAGCTCTTCTGAACAACTTA+TGG | + | chr5.2:13221954-13221973 | MS.gene64767:intron | 35.0% | |
| AATTACCGCTTTGTAAAGAG+CGG | - | chr5.2:13221507-13221526 | None:intergenic | 35.0% | |
| ACAAACATTCATCATGACAC+TGG | + | chr5.2:13222664-13222683 | MS.gene64767:intron | 35.0% | |
| ACACGGAAGATTATAATGTG+TGG | + | chr5.2:13221428-13221447 | MS.gene64767:intron | 35.0% | |
| ACCTTGTGTGTTAGATAATG+TGG | + | chr5.2:13222427-13222446 | MS.gene64767:intron | 35.0% | |
| AGCAGTAAGCAGATTAATAC+TGG | + | chr5.2:13223434-13223453 | MS.gene64767:intron | 35.0% | |
| ATGATGAAGAAGAAGAAGGT+GGG | + | chr5.2:13219753-13219772 | MS.gene64767:CDS | 35.0% | |
| CAAACACATGTAGTTACGTT+TGG | + | chr5.2:13220028-13220047 | MS.gene64767:intron | 35.0% | |
| CACATACATGTAGTTACCTT+TGG | + | chr5.2:13220174-13220193 | MS.gene64767:intron | 35.0% | |
| CCTTGTGTGTTAGATAATGT+GGG | + | chr5.2:13222428-13222447 | MS.gene64767:intron | 35.0% | |
| CTATGAAAACTGGAGGTAAT+TGG | + | chr5.2:13219882-13219901 | MS.gene64767:intron | 35.0% | |
| CTCACATTATCTTGCACAAA+CGG | - | chr5.2:13221578-13221597 | None:intergenic | 35.0% | |
| GAGGTAGACAAGCTAATTAT+CGG | - | chr5.2:13222210-13222229 | None:intergenic | 35.0% | |
| GCTTCATAGATTATTGTGTC+AGG | + | chr5.2:13220102-13220121 | MS.gene64767:intron | 35.0% | |
| GGTAAAATATCAGTTGTCAC+TGG | + | chr5.2:13222755-13222774 | MS.gene64767:intron | 35.0% | |
| GTAGTGAAAATCAACTTCCT+TGG | + | chr5.2:13220429-13220448 | MS.gene64767:intron | 35.0% | |
| GTCAGGTGTATGAAATGTAT+TGG | + | chr5.2:13220119-13220138 | MS.gene64767:intron | 35.0% | |
| GTGGTCTACAAAAAAGTAAG+AGG | - | chr5.2:13222229-13222248 | None:intergenic | 35.0% | |
| TAGAATATCAGGATACCAAC+AGG | - | chr5.2:13222039-13222058 | None:intergenic | 35.0% | |
| TCAGGGTGTATGAAATGTAT+TGG | + | chr5.2:13220144-13220163 | MS.gene64767:intron | 35.0% | |
| TGAAAAGATTGAAACTTGCG+AGG | - | chr5.2:13219293-13219312 | None:intergenic | 35.0% | |
| TTCAAATCCATATCCCTCAA+AGG | - | chr5.2:13219653-13219672 | None:intergenic | 35.0% | |
| TTCAGTAAGTATTCCATGTC+TGG | + | chr5.2:13221015-13221034 | MS.gene64767:intron | 35.0% | |
| TTGAGGATTATGAACAAGTG+TGG | - | chr5.2:13219225-13219244 | None:intergenic | 35.0% | |
| TTGTCGGAAGTTGGAAAAAT+GGG | - | chr5.2:13219434-13219453 | None:intergenic | 35.0% | |
| TTTGACCAGAGTAAAGACAA+AGG | - | chr5.2:13223532-13223551 | None:intergenic | 35.0% | |
| ! | AGTACTCTTGTTGTACAATG+TGG | + | chr5.2:13222149-13222168 | MS.gene64767:CDS | 35.0% |
| ! | ATGAAGAGAGAATTTTGTGG+AGG | - | chr5.2:13219334-13219353 | None:intergenic | 35.0% |
| ! | CACCAATTTAAGAGCCATTT+TGG | - | chr5.2:13220724-13220743 | None:intergenic | 35.0% |
| ! | CTGTTTTCATAAGCTATCCT+GGG | + | chr5.2:13221833-13221852 | MS.gene64767:intron | 35.0% |
| ! | GTATGAAATGTATTGGTGTC+AGG | + | chr5.2:13220126-13220145 | MS.gene64767:intron | 35.0% |
| ! | GTGATGAAGAGAGAATTTTG+TGG | - | chr5.2:13219337-13219356 | None:intergenic | 35.0% |
| ! | GTTTTTCTTCAACAACCGAT+AGG | - | chr5.2:13223039-13223058 | None:intergenic | 35.0% |
| ! | TAAGGTTTTTGCTGAGAAAG+AGG | + | chr5.2:13219730-13219749 | MS.gene64767:CDS | 35.0% |
| ! | TAATAGAAGTGTAGGGGAAA+AGG | + | chr5.2:13221211-13221230 | MS.gene64767:intron | 35.0% |
| ! | TTTGATTTATGGGAGCTTGT+TGG | + | chr5.2:13220499-13220518 | MS.gene64767:intron | 35.0% |
| !! | ATGCTTTTAACGGGTCATTT+GGG | + | chr5.2:13222461-13222480 | MS.gene64767:intron | 35.0% |
| !! | TTGCTTTGTTGTTTATGTGC+TGG | + | chr5.2:13222064-13222083 | MS.gene64767:intron | 35.0% |
| !!! | AGTTTTAGATTGAACGTGTC+AGG | + | chr5.2:13219977-13219996 | MS.gene64767:intron | 35.0% |
| AACCTTTGGTACCTAATGGA+TGG | + | chr5.2:13220753-13220772 | MS.gene64767:intron | 40.0% | |
| AATGGGATGCCGCAATTATA+CGG | - | chr5.2:13222509-13222528 | None:intergenic | 40.0% | |
| AGACTGTTCAGAAGAGCTTA+TGG | - | chr5.2:13221911-13221930 | None:intergenic | 40.0% | |
| AGGATACCAACAGGTAACTA+AGG | - | chr5.2:13222030-13222049 | None:intergenic | 40.0% | |
| ATGTCCATACATCATCACCA+AGG | - | chr5.2:13220449-13220468 | None:intergenic | 40.0% | |
| ATTTACCTACGAAGCAACAC+AGG | + | chr5.2:13222779-13222798 | MS.gene64767:intron | 40.0% | |
| CAACATAACACCAACACATG+AGG | - | chr5.2:13222871-13222890 | None:intergenic | 40.0% | |
| CAACTGTCTCTTGAGAAACT+CGG | + | chr5.2:13221547-13221566 | MS.gene64767:CDS | 40.0% | |
| CAAGCACATGTAGTTGTGTT+TGG | + | chr5.2:13220301-13220320 | MS.gene64767:intron | 40.0% | |
| CAATGACACGTAGATACCAA+AGG | - | chr5.2:13220193-13220212 | None:intergenic | 40.0% | |
| CCCACATTATCTAACACACA+AGG | - | chr5.2:13222431-13222450 | None:intergenic | 40.0% | |
| CTATGTGTCAGTGTCATATC+CGG | + | chr5.2:13220327-13220346 | MS.gene64767:intron | 40.0% | |
| CTTCGTAGTTGTTGTCATGT+TGG | - | chr5.2:13219361-13219380 | None:intergenic | 40.0% | |
| GAAAGACTTCCCTGGTTAAT+GGG | - | chr5.2:13223001-13223020 | None:intergenic | 40.0% | |
| GAGGATGATGAAGAAGAAGA+AGG | + | chr5.2:13219749-13219768 | MS.gene64767:CDS | 40.0% | |
| GATGATGAAGAAGAAGAAGG+TGG | + | chr5.2:13219752-13219771 | MS.gene64767:CDS | 40.0% | |
| GCTCTTTACAAAGCGGTAAT+TGG | + | chr5.2:13221506-13221525 | MS.gene64767:CDS | 40.0% | |
| GTCTGAACAGCAAGATGTAA+TGG | - | chr5.2:13222298-13222317 | None:intergenic | 40.0% | |
| GTTGTCGGAAGTTGGAAAAA+TGG | - | chr5.2:13219435-13219454 | None:intergenic | 40.0% | |
| GTTGTTTACGAGGTTGTTGT+CGG | - | chr5.2:13219450-13219469 | None:intergenic | 40.0% | |
| GTTGTTTATGTGCTGGAAAC+AGG | + | chr5.2:13222071-13222090 | MS.gene64767:intron | 40.0% | |
| TACATATCTAGTCCCATGCT+TGG | + | chr5.2:13223120-13223139 | MS.gene64767:intron | 40.0% | |
| TCACAACCTTTGGTACCTAA+TGG | + | chr5.2:13220749-13220768 | MS.gene64767:intron | 40.0% | |
| TCATTTGCTCTGTCTTAGGA+TGG | + | chr5.2:13222265-13222284 | MS.gene64767:intron | 40.0% | |
| TCTCAAGAGACAGTTGGTTA+TGG | - | chr5.2:13221543-13221562 | None:intergenic | 40.0% | |
| TGTCGGAAGTTGGAAAAATG+GGG | - | chr5.2:13219433-13219452 | None:intergenic | 40.0% | |
| TGTGGTGTTCCGTATAATTG+CGG | + | chr5.2:13222497-13222516 | MS.gene64767:intron | 40.0% | |
| TTATGTGCTGGAAACAGGAT+GGG | + | chr5.2:13222076-13222095 | MS.gene64767:intron | 40.0% | |
| TTGTACAGCATAGTGCATCA+AGG | - | chr5.2:13222106-13222125 | None:intergenic | 40.0% | |
| TTGTTCCATCGTTGATGTTG+CGG | + | chr5.2:13221145-13221164 | MS.gene64767:intron | 40.0% | |
| TTTATGTGCTGGAAACAGGA+TGG | + | chr5.2:13222075-13222094 | MS.gene64767:intron | 40.0% | |
| TTTGACCGCTCTTTACAAAG+CGG | + | chr5.2:13221499-13221518 | MS.gene64767:CDS | 40.0% | |
| ! | AAAGAGGGTTGATTCCTTTG+AGG | + | chr5.2:13219636-13219655 | MS.gene64767:CDS | 40.0% |
| ! | AAGAGGGTTGATTCCTTTGA+GGG | + | chr5.2:13219637-13219656 | MS.gene64767:CDS | 40.0% |
| ! | AGAGAATTTTGTGGAGGTTG+CGG | - | chr5.2:13219328-13219347 | None:intergenic | 40.0% |
| ! | CAAGAAGCACAAAAAACTCG+CGG | - | chr5.2:13222552-13222571 | None:intergenic | 40.0% |
| ! | GTGAAGCTTCTGCTGATTAA+AGG | + | chr5.2:13222334-13222353 | MS.gene64767:CDS | 40.0% |
| ! | GTTGATTCCTTTGAGGGATA+TGG | + | chr5.2:13219643-13219662 | MS.gene64767:CDS | 40.0% |
| ! | TTTTGTGTATAGGTCGTCCT+AGG | + | chr5.2:13220930-13220949 | MS.gene64767:intron | 40.0% |
| !! | AATAGAAGCGGGCTGAATAT+AGG | + | chr5.2:13222714-13222733 | MS.gene64767:intron | 40.0% |
| !! | AATCCTAGATGGGCTGTTTA+TGG | + | chr5.2:13219803-13219822 | MS.gene64767:CDS | 40.0% |
| !! | ACTTCCTTGGTGATGATGTA+TGG | + | chr5.2:13220442-13220461 | MS.gene64767:intron | 40.0% |
| !! | ATCCTAGATGGGCTGTTTAT+GGG | + | chr5.2:13219804-13219823 | MS.gene64767:CDS | 40.0% |
| !! | CTCATGTGTTGGTGTTATGT+TGG | + | chr5.2:13222869-13222888 | MS.gene64767:intron | 40.0% |
| !! | GATGCTTTTAACGGGTCATT+TGG | + | chr5.2:13222460-13222479 | MS.gene64767:intron | 40.0% |
| !! | GCTGTTTTCATAAGCTATCC+TGG | + | chr5.2:13221832-13221851 | MS.gene64767:intron | 40.0% |
| !! | GTCTTTTGTTTGTCTCAGGA+TGG | + | chr5.2:13223491-13223510 | MS.gene64767:intron | 40.0% |
| !!! | GGGTCATTTGGGTTTTTTGT+GGG | + | chr5.2:13222472-13222491 | MS.gene64767:intron | 40.0% |
| !!! | TTGGGTTTTTTGTGGGTTTG+TGG | + | chr5.2:13222479-13222498 | MS.gene64767:intron | 40.0% |
| AAGAGATTCGCCCATTAACC+AGG | + | chr5.2:13222988-13223007 | MS.gene64767:intron | 45.0% | |
| ACAATGATGAATTCCCGGTG+AGG | - | chr5.2:13221697-13221716 | None:intergenic | 45.0% | |
| AGAGATTCGCCCATTAACCA+GGG | + | chr5.2:13222989-13223008 | MS.gene64767:intron | 45.0% | |
| AGATTGAAACTTGCGAGGTG+TGG | - | chr5.2:13219288-13219307 | None:intergenic | 45.0% | |
| AGTGCCTAGGAATCCTAGAT+GGG | + | chr5.2:13219793-13219812 | MS.gene64767:CDS | 45.0% | |
| CAATGATGAATTCCCGGTGA+GGG | - | chr5.2:13221696-13221715 | None:intergenic | 45.0% | |
| CAGTGATTGTTCACCAGACA+TGG | - | chr5.2:13221031-13221050 | None:intergenic | 45.0% | |
| CGAGTTTCTCAAGAGACAGT+TGG | - | chr5.2:13221549-13221568 | None:intergenic | 45.0% | |
| CTACGTGTCAGTGTCGTATA+TGG | + | chr5.2:13220054-13220073 | MS.gene64767:intron | 45.0% | |
| CTCGACCTTTGTCTTTACTC+TGG | + | chr5.2:13223524-13223543 | MS.gene64767:CDS | 45.0% | |
| GAAGTAGCAACTGACAAGTC+TGG | - | chr5.2:13220998-13221017 | None:intergenic | 45.0% | |
| GACTCTGCTGCTATGAAAAC+TGG | + | chr5.2:13219872-13219891 | MS.gene64767:CDS | 45.0% | |
| GAGGTGTGGAAGAAGAAGAA+GGG | - | chr5.2:13219274-13219293 | None:intergenic | 45.0% | |
| GAGTAAAGACAAAGGTCGAG+TGG | - | chr5.2:13223524-13223543 | None:intergenic | 45.0% | |
| GCATATTTCCATAAGCTCCC+AGG | - | chr5.2:13221853-13221872 | None:intergenic | 45.0% | |
| GGAAAGACTTCCCTGGTTAA+TGG | - | chr5.2:13223002-13223021 | None:intergenic | 45.0% | |
| GTGGAAGAAGAAGAAGGGAA+TGG | - | chr5.2:13219269-13219288 | None:intergenic | 45.0% | |
| TAAGCTATCCTGGGAGCTTA+TGG | + | chr5.2:13221842-13221861 | MS.gene64767:intron | 45.0% | |
| TACAGCATAGTGCATCAAGG+TGG | - | chr5.2:13222103-13222122 | None:intergenic | 45.0% | |
| TAGTGCCTAGGAATCCTAGA+TGG | + | chr5.2:13219792-13219811 | MS.gene64767:CDS | 45.0% | |
| TATGTGCTGGAAACAGGATG+GGG | + | chr5.2:13222077-13222096 | MS.gene64767:intron | 45.0% | |
| TCGCTAAAGAAGCAAGTGCT+TGG | - | chr5.2:13223095-13223114 | None:intergenic | 45.0% | |
| TCGTCCTAGGTTGTTTACCA+GGG | + | chr5.2:13220943-13220962 | MS.gene64767:CDS | 45.0% | |
| TCTGCTGCTATGAAAACTGG+AGG | + | chr5.2:13219875-13219894 | MS.gene64767:CDS | 45.0% | |
| TGACTTAGGAAAGACTTCCC+TGG | - | chr5.2:13223009-13223028 | None:intergenic | 45.0% | |
| TGCCATCCATTAGGTACCAA+AGG | - | chr5.2:13220758-13220777 | None:intergenic | 45.0% | |
| TGTTTATGGGAGAGGTTTCG+AGG | + | chr5.2:13219817-13219836 | MS.gene64767:CDS | 45.0% | |
| TTACTCCGCAACATCAACGA+TGG | - | chr5.2:13221153-13221172 | None:intergenic | 45.0% | |
| TTCTTCTTATCCCCGTCTGT+CGG | - | chr5.2:13223607-13223626 | None:intergenic | 45.0% | |
| ! | ATGGAGAGAAGAAGAGTGTG+TGG | - | chr5.2:13219250-13219269 | None:intergenic | 45.0% |
| ! | ATTGGCTCAGTTGAAGCCTT+TGG | + | chr5.2:13219700-13219719 | MS.gene64767:CDS | 45.0% |
| ! | CTACGTGTCATTGTCACATC+TGG | + | chr5.2:13220200-13220219 | MS.gene64767:intron | 45.0% |
| ! | CTTGCAGCAAAAGTGTGCAA+AGG | - | chr5.2:13221324-13221343 | None:intergenic | 45.0% |
| ! | TGGAGAGAAGAAGAGTGTGT+GGG | - | chr5.2:13219249-13219268 | None:intergenic | 45.0% |
| ! | TTGCACACTTTTGCTGCAAG+CGG | + | chr5.2:13221324-13221343 | MS.gene64767:CDS | 45.0% |
| !! | AGGTGCTTTTAATGGGTCGT+TGG | + | chr5.2:13222734-13222753 | MS.gene64767:intron | 45.0% |
| !! | CAGTTGAAGCCTTTGGTTCT+TGG | + | chr5.2:13219707-13219726 | MS.gene64767:CDS | 45.0% |
| !! | GAAGCCTTTGGTTCTTGGTA+AGG | + | chr5.2:13219712-13219731 | MS.gene64767:CDS | 45.0% |
| !! | TATTGTTTAGGGTGCCGTTC+TGG | + | chr5.2:13220252-13220271 | MS.gene64767:intron | 45.0% |
| !! | TGGTGCTACTTCACAACCTT+TGG | + | chr5.2:13220739-13220758 | MS.gene64767:intron | 45.0% |
| !!! | CGGGTCATTTGGGTTTTTTG+TGG | + | chr5.2:13222471-13222490 | MS.gene64767:intron | 45.0% |
| ACGAGGTTGTTGTCGGAAGT+TGG | - | chr5.2:13219443-13219462 | None:intergenic | 50.0% | |
| ATACGTGTCAGCCACCAGAA+CGG | - | chr5.2:13220269-13220288 | None:intergenic | 50.0% | |
| CGAGGTGTGGAAGAAGAAGA+AGG | - | chr5.2:13219275-13219294 | None:intergenic | 50.0% | |
| CTCCCATAAACAGCCCATCT+AGG | - | chr5.2:13219809-13219828 | None:intergenic | 50.0% | |
| GACTGTCTTGTCTTCGAGGA+AGG | + | chr5.2:13219395-13219414 | MS.gene64767:CDS | 50.0% | |
| GCAGCAACACAGACACATAC+CGG | - | chr5.2:13220349-13220368 | None:intergenic | 50.0% | |
| GCCTTATCACTTCTCCTGCA+AGG | - | chr5.2:13223227-13223246 | None:intergenic | 50.0% | |
| GCCTTGCAGGAGAAGTGATA+AGG | + | chr5.2:13223223-13223242 | MS.gene64767:intron | 50.0% | |
| GTCGTCCTAGGTTGTTTACC+AGG | + | chr5.2:13220942-13220961 | MS.gene64767:CDS | 50.0% | |
| GTTGTTTACCAGGGAGGAGA+GGG | + | chr5.2:13220952-13220971 | MS.gene64767:CDS | 50.0% | |
| TCCTAGGTTGTTTACCAGGG+AGG | + | chr5.2:13220946-13220965 | MS.gene64767:CDS | 50.0% | |
| TCCTCCCTGGTAAACAACCT+AGG | - | chr5.2:13220950-13220969 | None:intergenic | 50.0% | |
| TCTTCTTATCCCCGTCTGTC+GGG | - | chr5.2:13223606-13223625 | None:intergenic | 50.0% | |
| TTATAGACGCTCCCGACAGA+CGG | + | chr5.2:13223592-13223611 | MS.gene64767:CDS | 50.0% | |
| TTGCTCTGTCTTAGGATGGC+TGG | + | chr5.2:13222269-13222288 | MS.gene64767:intron | 50.0% | |
| ! | AAGAAGAGTGTGTGGGGTTG+AGG | - | chr5.2:13219242-13219261 | None:intergenic | 50.0% |
| ! | ACAGCCCATCTAGGATTCCT+AGG | - | chr5.2:13219800-13219819 | None:intergenic | 50.0% |
| ! | GGAGAGAAGAAGAGTGTGTG+GGG | - | chr5.2:13219248-13219267 | None:intergenic | 50.0% |
| !! | AAGGTGGGTTGAGTGATGAG+AGG | + | chr5.2:13219768-13219787 | MS.gene64767:CDS | 50.0% |
| !! | AGATGGGCTGTTTATGGGAG+AGG | + | chr5.2:13219809-13219828 | MS.gene64767:CDS | 50.0% |
| !! | AGGTGGGTTGAGTGATGAGA+GGG | + | chr5.2:13219769-13219788 | MS.gene64767:CDS | 50.0% |
| !! | GAATGCCTGTGTTGCTTCGT+AGG | - | chr5.2:13222787-13222806 | None:intergenic | 50.0% |
| AATCTCAGTCCTCGCCTTGC+AGG | + | chr5.2:13223210-13223229 | MS.gene64767:intron | 55.0% | |
| ATCACTTCTCCTGCAAGGCG+AGG | - | chr5.2:13223222-13223241 | None:intergenic | 55.0% | |
| CAACAAATCCCTCTCCTCCC+TGG | - | chr5.2:13220963-13220982 | None:intergenic | 55.0% | |
| CAGGTGCGCTTGACACGTAA+TGG | + | chr5.2:13219996-13220015 | MS.gene64767:intron | 55.0% | |
| CGGAGACTGTCTTGTCTTCG+AGG | + | chr5.2:13219391-13219410 | MS.gene64767:CDS | 55.0% | |
| GGTTGTTTACCAGGGAGGAG+AGG | + | chr5.2:13220951-13220970 | MS.gene64767:CDS | 55.0% | |
| GTGATGAGAGGGTAGTGCCT+AGG | + | chr5.2:13219780-13219799 | MS.gene64767:CDS | 55.0% | |
| TATAGACGCTCCCGACAGAC+GGG | + | chr5.2:13223593-13223612 | MS.gene64767:CDS | 55.0% | |
| !! | GTCTGTCGGGAGCGTCTATA+AGG | - | chr5.2:13223593-13223612 | None:intergenic | 55.0% |
| !! | TGTTTAGGGTGCCGTTCTGG+TGG | + | chr5.2:13220255-13220274 | MS.gene64767:intron | 55.0% |
| ATAGACGCTCCCGACAGACG+GGG | + | chr5.2:13223594-13223613 | MS.gene64767:CDS | 60.0% | |
| GATGAATTCCCGGTGAGGGC+AGG | - | chr5.2:13221692-13221711 | None:intergenic | 60.0% | |
| CGTGCTCTTCCTGCCCTCAC+CGG | + | chr5.2:13221680-13221699 | MS.gene64767:intron | 65.0% | |
| GTGCTCTTCCTGCCCTCACC+GGG | + | chr5.2:13221681-13221700 | MS.gene64767:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 13219209 | 13223631 | 13219209 | ID=MS.gene64767 |
| chr5.2 | mRNA | 13219209 | 13223631 | 13219209 | ID=MS.gene64767.t1;Parent=MS.gene64767 |
| chr5.2 | exon | 13219209 | 13219896 | 13219209 | ID=MS.gene64767.t1.exon1;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13219209 | 13219896 | 13219209 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| chr5.2 | exon | 13220942 | 13221018 | 13220942 | ID=MS.gene64767.t1.exon2;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13220942 | 13221018 | 13220942 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| chr5.2 | exon | 13221309 | 13221407 | 13221309 | ID=MS.gene64767.t1.exon3;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13221309 | 13221407 | 13221309 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| chr5.2 | exon | 13221494 | 13221592 | 13221494 | ID=MS.gene64767.t1.exon4;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13221494 | 13221592 | 13221494 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| chr5.2 | exon | 13222093 | 13222191 | 13222093 | ID=MS.gene64767.t1.exon5;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13222093 | 13222191 | 13222093 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| chr5.2 | exon | 13222283 | 13222381 | 13222283 | ID=MS.gene64767.t1.exon6;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13222283 | 13222381 | 13222283 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| chr5.2 | exon | 13223509 | 13223631 | 13223509 | ID=MS.gene64767.t1.exon7;Parent=MS.gene64767.t1 |
| chr5.2 | CDS | 13223509 | 13223631 | 13223509 | ID=cds.MS.gene64767.t1;Parent=MS.gene64767.t1 |
| Gene Sequence |
| Protein sequence |
