Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65420.t1 | XP_013454536.1 | 74.1 | 197 | 12 | 2 | 1 | 196 | 1 | 159 | 1.40E-18 | 103.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65420.t1 | A0A072UFV8 | 74.1 | 197 | 12 | 2 | 1 | 196 | 1 | 159 | 1.0e-18 | 103.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049491 | MS.gene65420 | 0.830017 | 3.72E-55 | -1.69E-46 |
| MS.gene049758 | MS.gene65420 | 0.802258 | 6.11E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene65420 | 0.806835 | 6.78E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene65420 | 0.801186 | 1.01E-48 | -1.69E-46 |
| MS.gene052340 | MS.gene65420 | 0.807098 | 5.97E-50 | -1.69E-46 |
| MS.gene053181 | MS.gene65420 | 0.874951 | 4.52E-68 | -1.69E-46 |
| MS.gene053209 | MS.gene65420 | 0.813686 | 2.26E-51 | -1.69E-46 |
| MS.gene055422 | MS.gene65420 | 0.803632 | 3.18E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene65420 | 0.8127 | 3.72E-51 | -1.69E-46 |
| MS.gene057449 | MS.gene65420 | 0.806482 | 8.05E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene65420 | 0.800272 | 1.56E-48 | -1.69E-46 |
| MS.gene058660 | MS.gene65420 | 0.80858 | 2.89E-50 | -1.69E-46 |
| MS.gene059676 | MS.gene65420 | 0.808941 | 2.42E-50 | -1.69E-46 |
| MS.gene059688 | MS.gene65420 | 0.815265 | 1.01E-51 | -1.69E-46 |
| MS.gene059692 | MS.gene65420 | 0.837178 | 6.06E-57 | -1.69E-46 |
| MS.gene059695 | MS.gene65420 | 0.830522 | 2.80E-55 | -1.69E-46 |
| MS.gene059894 | MS.gene65420 | 0.815344 | 9.70E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene65420 | 0.80145 | 8.95E-49 | -1.69E-46 |
| MS.gene061049 | MS.gene65420 | 0.805402 | 1.36E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65420.t1 | MTR_4g007600 | 58.291 | 199 | 40 | 4 | 1 | 196 | 1 | 159 | 1.36e-44 | 145 |
| MS.gene65420.t1 | MTR_4g007620 | 66.234 | 77 | 24 | 2 | 1 | 76 | 13 | 88 | 1.88e-22 | 89.4 |
| MS.gene65420.t1 | MTR_4g007560 | 61.250 | 80 | 24 | 1 | 1 | 73 | 1 | 80 | 1.09e-20 | 84.3 |
| MS.gene65420.t1 | MTR_4g007590 | 52.326 | 86 | 31 | 2 | 1 | 76 | 1 | 86 | 1.09e-18 | 79.0 |
| MS.gene65420.t1 | MTR_4g007570 | 55.263 | 76 | 28 | 2 | 1 | 76 | 1 | 70 | 1.31e-18 | 78.2 |
| MS.gene65420.t1 | MTR_4g007570 | 55.405 | 74 | 27 | 2 | 1 | 74 | 1 | 68 | 2.86e-17 | 75.5 |
| MS.gene65420.t1 | MTR_4g007580 | 52.000 | 75 | 25 | 4 | 1 | 74 | 1 | 65 | 3.75e-12 | 61.2 |
| MS.gene65420.t1 | MTR_4g007670 | 88.889 | 27 | 3 | 0 | 170 | 196 | 109 | 135 | 3.47e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 74 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAATGGGAGGAGGTGGATT+TGG | 0.280190 | 4.3:+87861331 | MS.gene65420:CDS |
| GGAAAGGGAGGAGGTGGATC+TGG | 0.293559 | 4.3:+87861361 | MS.gene65420:CDS |
| GGAGGAGGTGGAAGGGGAGG+AGG | 0.294260 | 4.3:+87861277 | MS.gene65420:CDS |
| ACGATAATAGGAAATTTATA+TGG | 0.302449 | 4.3:+87861148 | MS.gene65420:intron |
| GGAGGTGGAAGGGGAGGAGG+TGG | 0.304793 | 4.3:+87861280 | MS.gene65420:CDS |
| GGTGGAGGAAAGGGAGGAGG+TGG | 0.314138 | 4.3:+87861400 | MS.gene65420:CDS |
| GGATCTGGAGGAGGTGGAAT+AGG | 0.319517 | 4.3:+87861376 | MS.gene65420:CDS |
| GCCTTCATCTTCATTTGAAA+TGG | 0.326206 | 4.3:-87860974 | None:intergenic |
| AGGGGAGGAGGTGGATTTAG+TGG | 0.341806 | 4.3:+87861289 | MS.gene65420:CDS |
| GGTGGAGGAAAGGGAGGAGG+TGG | 0.346499 | 4.3:+87861355 | MS.gene65420:CDS |
| GGAAAGGGAGGAGGTGGAAT+GGG | 0.349740 | 4.3:+87861406 | MS.gene65420:CDS |
| GGAATAGGAGGTGGAGGAAA+GGG | 0.351372 | 4.3:+87861391 | MS.gene65420:CDS |
| AAGGGAGGAGGTGGAATGGG+AGG | 0.356510 | 4.3:+87861409 | MS.gene65420:CDS |
| AAGGGAGGAGGTGGATCTGG+AGG | 0.361974 | 4.3:+87861364 | MS.gene65420:CDS |
| GAACAAGCACATGAGGTTAA+TGG | 0.363274 | 4.3:+87861018 | MS.gene65420:CDS |
| ATAGGAGGTGGAGGAAAGGG+AGG | 0.364127 | 4.3:+87861394 | MS.gene65420:CDS |
| GGAGGTGGATCTGGAGGAGG+TGG | 0.366538 | 4.3:+87861370 | MS.gene65420:CDS |
| GGATTTGGAGGAGGAGTGGC+AGG | 0.379627 | 4.3:+87861442 | MS.gene65420:CDS |
| GGAGGAGGTGGAATGGGAGG+AGG | 0.381242 | 4.3:+87861322 | MS.gene65420:CDS |
| GGATTTGGAGGTGGAGGAAA+GGG | 0.386379 | 4.3:+87861346 | MS.gene65420:CDS |
| TGGAATAGGAGGTGGAGGAA+AGG | 0.387806 | 4.3:+87861390 | MS.gene65420:CDS |
| GGAGGTGGAATGGGAGGAGG+TGG | 0.390133 | 4.3:+87861325 | MS.gene65420:CDS |
| GGAGGTGGAGGAAAGGGAGG+AGG | 0.395444 | 4.3:+87861397 | MS.gene65420:CDS |
| TTTGGAGGTGGAGGAAAGGG+AGG | 0.396785 | 4.3:+87861349 | MS.gene65420:CDS |
| GGAGGAGGTGGAATGGGAGG+GGG | 0.398655 | 4.3:+87861412 | MS.gene65420:CDS |
| ATTATCGGCGGTGGAATTGT+AGG | 0.404109 | 4.3:+87861481 | MS.gene65420:CDS |
| GGAGGAGGTGGATCTGGAGG+AGG | 0.404697 | 4.3:+87861367 | MS.gene65420:CDS |
| TCGACGGGAGGAGGTGGAAG+GGG | 0.410147 | 4.3:+87861271 | MS.gene65420:CDS |
| CATGTGCTTGTTCATTACTC+TGG | 0.410300 | 4.3:-87861008 | None:intergenic |
| ATAGGAAATTTATATGGAAA+TGG | 0.411309 | 4.3:+87861154 | MS.gene65420:intron |
| GAGCATTTGAGATGATCAAT+AGG | 0.414061 | 4.3:-87860948 | None:intergenic |
| GCAAGCGGAGGAGGTGGAAT+GGG | 0.415178 | 4.3:+87861316 | MS.gene65420:CDS |
| AGGAAAGGGAGGAGGTGGAA+TGG | 0.417507 | 4.3:+87861405 | MS.gene65420:CDS |
| GGAGGTGGAGGAAAGGGAGG+AGG | 0.423397 | 4.3:+87861352 | MS.gene65420:CDS |
| ACGGGAGGAGGTGGAAGGGG+AGG | 0.424441 | 4.3:+87861274 | MS.gene65420:CDS |
| TGGATTTGGAGGTGGAGGAA+AGG | 0.425116 | 4.3:+87861345 | MS.gene65420:CDS |
| GGTGGGAAGGGATTTGGAGG+AGG | 0.425225 | 4.3:+87861433 | MS.gene65420:CDS |
| GGAGCGGCCGGTGGAATTAT+CGG | 0.426438 | 4.3:+87861466 | MS.gene65420:CDS |
| GGGAGGAGGTGGAATGGGAG+GGG | 0.432996 | 4.3:+87861411 | MS.gene65420:CDS |
| ATGGGAGGAGGTGGATTTGG+AGG | 0.433737 | 4.3:+87861334 | MS.gene65420:CDS |
| GGAGGTGGATTTGGAGGTGG+AGG | 0.460844 | 4.3:+87861340 | MS.gene65420:CDS |
| GGAGGAGGTGGATTTGGAGG+TGG | 0.476941 | 4.3:+87861337 | MS.gene65420:CDS |
| GGAGGAGGTGGAATAGGAGG+TGG | 0.482563 | 4.3:+87861382 | MS.gene65420:CDS |
| AGGGAGGAGGTGGAATGGGA+GGG | 0.484959 | 4.3:+87861410 | MS.gene65420:CDS |
| AGTGGAGGTGCAAGCGGAGG+AGG | 0.488977 | 4.3:+87861307 | MS.gene65420:CDS |
| GGAGGTGGAATAGGAGGTGG+AGG | 0.494295 | 4.3:+87861385 | MS.gene65420:CDS |
| GTGGCAGGTGGAGCGGCCGG+TGG | 0.496396 | 4.3:+87861457 | MS.gene65420:CDS |
| GCCATTTCAAATGAAGATGA+AGG | 0.496545 | 4.3:+87860973 | MS.gene65420:CDS |
| GGAGTGGCAGGTGGAGCGGC+CGG | 0.498879 | 4.3:+87861454 | MS.gene65420:CDS |
| TCTGGAGGAGGTGGAATAGG+AGG | 0.499484 | 4.3:+87861379 | MS.gene65420:CDS |
| GCCGGTGGAATTATCGGCGG+TGG | 0.500222 | 4.3:+87861472 | MS.gene65420:CDS |
| GGAGGTGCAAGCGGAGGAGG+TGG | 0.508022 | 4.3:+87861310 | MS.gene65420:CDS |
| TGCAAGCGGAGGAGGTGGAA+TGG | 0.508541 | 4.3:+87861315 | MS.gene65420:CDS |
| TTTCGACGGGAGGAGGTGGA+AGG | 0.517005 | 4.3:+87861269 | MS.gene65420:CDS |
| AGGAGGAGTGGCAGGTGGAG+CGG | 0.523525 | 4.3:+87861450 | MS.gene65420:CDS |
| GAAGGGATTTGGAGGAGGAG+TGG | 0.528933 | 4.3:+87861438 | MS.gene65420:CDS |
| AGCGGAGGAGGTGGAATGGG+AGG | 0.541101 | 4.3:+87861319 | MS.gene65420:CDS |
| GCAAATCGCGGTCACAATGG+TGG | 0.544739 | 4.3:+87861514 | MS.gene65420:CDS |
| TTCGACGGGAGGAGGTGGAA+GGG | 0.547737 | 4.3:+87861270 | MS.gene65420:CDS |
| TTTGGAGGAGGAGTGGCAGG+TGG | 0.584933 | 4.3:+87861445 | MS.gene65420:CDS |
| CAAATCGCGGTCACAATGGT+GGG | 0.586802 | 4.3:+87861515 | MS.gene65420:CDS |
| GGCGGCGCAGTTGCAAATCG+CGG | 0.603738 | 4.3:+87861502 | MS.gene65420:CDS |
| TCCTCCCGTCGAAAACCTCA+TGG | 0.608672 | 4.3:-87861260 | None:intergenic |
| GAGTAATGAACAAGCACATG+AGG | 0.616284 | 4.3:+87861011 | MS.gene65420:CDS |
| GGAGGAGGTGGATTTAGTGG+AGG | 0.619290 | 4.3:+87861292 | MS.gene65420:CDS |
| GGATTTAGTGGAGGTGCAAG+CGG | 0.621029 | 4.3:+87861301 | MS.gene65420:CDS |
| TCCACCGCCGATAATTCCAC+CGG | 0.628670 | 4.3:-87861473 | None:intergenic |
| GGTCACAATGGTGGGTACAA+TGG | 0.639906 | 4.3:+87861523 | MS.gene65420:CDS |
| TTTAGTGGAGGTGCAAGCGG+AGG | 0.644874 | 4.3:+87861304 | MS.gene65420:CDS |
| GTTGCAAATCGCGGTCACAA+TGG | 0.665083 | 4.3:+87861511 | MS.gene65420:CDS |
| ATCGGCGGTGGAATTGTAGG+CGG | 0.690527 | 4.3:+87861484 | MS.gene65420:CDS |
| GCGGCCGGTGGAATTATCGG+CGG | 0.704897 | 4.3:+87861469 | MS.gene65420:CDS |
| GTAACATAGAAGTCTCCACA+AGG | 0.724906 | 4.3:+87861176 | MS.gene65420:CDS |
| ATGAATTGTCTGTTGCCATG+AGG | 0.730410 | 4.3:+87861245 | MS.gene65420:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACGATAATAGGAAATTTATA+TGG | + | chr4.3:87861148-87861167 | MS.gene65420:intron | 20.0% |
| !! | ATAGGAAATTTATATGGAAA+TGG | + | chr4.3:87861154-87861173 | MS.gene65420:intron | 20.0% |
| !!! | AAGTTTTTACTTGTTTGAAA+AGG | - | chr4.3:87861057-87861076 | None:intergenic | 20.0% |
| !!! | ACGTGTTTTTATTTTAATCT+TGG | + | chr4.3:87861105-87861124 | MS.gene65420:intron | 20.0% |
| ! | TTTACTTGTTTGAAAAGGTA+AGG | - | chr4.3:87861052-87861071 | None:intergenic | 25.0% |
| !! | TTGTGTTATTCAACGATAAT+AGG | + | chr4.3:87861136-87861155 | MS.gene65420:intron | 25.0% |
| AATGTTGAGACACAAAAATG+AGG | - | chr4.3:87861583-87861602 | None:intergenic | 30.0% | |
| GAACAACAAAAATGTGATTG+TGG | + | chr4.3:87861201-87861220 | MS.gene65420:CDS | 30.0% | |
| ! | TGATTTTATGTATGAGCTTC+TGG | + | chr4.3:87861602-87861621 | MS.gene65420:CDS | 30.0% |
| !!! | ATTTTTGTTGTTCAACCTTG+TGG | - | chr4.3:87861194-87861213 | None:intergenic | 30.0% |
| GCCATTTCAAATGAAGATGA+AGG | + | chr4.3:87860973-87860992 | MS.gene65420:CDS | 35.0% | |
| GCCTTCATCTTCATTTGAAA+TGG | - | chr4.3:87860977-87860996 | None:intergenic | 35.0% | |
| ! | GAGCATTTGAGATGATCAAT+AGG | - | chr4.3:87860951-87860970 | None:intergenic | 35.0% |
| ATGAATTGTCTGTTGCCATG+AGG | + | chr4.3:87861245-87861264 | MS.gene65420:CDS | 40.0% | |
| CATGTGCTTGTTCATTACTC+TGG | - | chr4.3:87861011-87861030 | None:intergenic | 40.0% | |
| GAACAAGCACATGAGGTTAA+TGG | + | chr4.3:87861018-87861037 | MS.gene65420:CDS | 40.0% | |
| GAGTAATGAACAAGCACATG+AGG | + | chr4.3:87861011-87861030 | MS.gene65420:CDS | 40.0% | |
| GTAACATAGAAGTCTCCACA+AGG | + | chr4.3:87861176-87861195 | MS.gene65420:CDS | 40.0% | |
| ATTATCGGCGGTGGAATTGT+AGG | + | chr4.3:87861481-87861500 | MS.gene65420:CDS | 45.0% | |
| ! | TGTTGCCATGAGGTTTTCGA+CGG | + | chr4.3:87861255-87861274 | MS.gene65420:CDS | 45.0% |
| CAAATCGCGGTCACAATGGT+GGG | + | chr4.3:87861515-87861534 | MS.gene65420:CDS | 50.0% | |
| GGAATAGGAGGTGGAGGAAA+GGG | + | chr4.3:87861391-87861410 | MS.gene65420:CDS | 50.0% | |
| GGATTTGGAGGTGGAGGAAA+GGG | + | chr4.3:87861346-87861365 | MS.gene65420:CDS | 50.0% | |
| GTTGCAAATCGCGGTCACAA+TGG | + | chr4.3:87861511-87861530 | MS.gene65420:CDS | 50.0% | |
| TGGAATAGGAGGTGGAGGAA+AGG | + | chr4.3:87861390-87861409 | MS.gene65420:CDS | 50.0% | |
| TGGATTTGGAGGTGGAGGAA+AGG | + | chr4.3:87861345-87861364 | MS.gene65420:CDS | 50.0% | |
| ! | GGATTTAGTGGAGGTGCAAG+CGG | + | chr4.3:87861301-87861320 | MS.gene65420:CDS | 50.0% |
| ! | GTTGCCATGAGGTTTTCGAC+GGG | + | chr4.3:87861256-87861275 | MS.gene65420:CDS | 50.0% |
| !! | GGTCACAATGGTGGGTACAA+TGG | + | chr4.3:87861523-87861542 | MS.gene65420:CDS | 50.0% |
| AGGAAAGGGAGGAGGTGGAA+TGG | + | chr4.3:87861405-87861424 | MS.gene65420:CDS | 55.0% | |
| ATAGGAGGTGGAGGAAAGGG+AGG | + | chr4.3:87861394-87861413 | MS.gene65420:CDS | 55.0% | |
| ATCGGCGGTGGAATTGTAGG+CGG | + | chr4.3:87861484-87861503 | MS.gene65420:CDS | 55.0% | |
| GAAGGGATTTGGAGGAGGAG+TGG | + | chr4.3:87861438-87861457 | MS.gene65420:CDS | 55.0% | |
| GCAAATCGCGGTCACAATGG+TGG | + | chr4.3:87861514-87861533 | MS.gene65420:CDS | 55.0% | |
| GGAAAGGGAGGAGGTGGAAT+GGG | + | chr4.3:87861406-87861425 | MS.gene65420:CDS | 55.0% | |
| GGATCTGGAGGAGGTGGAAT+AGG | + | chr4.3:87861376-87861395 | MS.gene65420:CDS | 55.0% | |
| TCCACCGCCGATAATTCCAC+CGG | - | chr4.3:87861476-87861495 | None:intergenic | 55.0% | |
| TCCTCCCGTCGAAAACCTCA+TGG | - | chr4.3:87861263-87861282 | None:intergenic | 55.0% | |
| TCTGGAGGAGGTGGAATAGG+AGG | + | chr4.3:87861379-87861398 | MS.gene65420:CDS | 55.0% | |
| TTTGGAGGTGGAGGAAAGGG+AGG | + | chr4.3:87861349-87861368 | MS.gene65420:CDS | 55.0% | |
| ! | AGGGGAGGAGGTGGATTTAG+TGG | + | chr4.3:87861289-87861308 | MS.gene65420:CDS | 55.0% |
| ! | ATGAGGTTTTCGACGGGAGG+AGG | + | chr4.3:87861262-87861281 | MS.gene65420:CDS | 55.0% |
| ! | ATGGGAGGAGGTGGATTTGG+AGG | + | chr4.3:87861334-87861353 | MS.gene65420:CDS | 55.0% |
| ! | GGAATGGGAGGAGGTGGATT+TGG | + | chr4.3:87861331-87861350 | MS.gene65420:CDS | 55.0% |
| ! | GGAGGAGGTGGATTTAGTGG+AGG | + | chr4.3:87861292-87861311 | MS.gene65420:CDS | 55.0% |
| ! | TTTAGTGGAGGTGCAAGCGG+AGG | + | chr4.3:87861304-87861323 | MS.gene65420:CDS | 55.0% |
| AAGGGAGGAGGTGGAATGGG+AGG | + | chr4.3:87861409-87861428 | MS.gene65420:CDS | 60.0% | |
| AAGGGAGGAGGTGGATCTGG+AGG | + | chr4.3:87861364-87861383 | MS.gene65420:CDS | 60.0% | |
| AGGGAGGAGGTGGAATGGGA+GGG | + | chr4.3:87861410-87861429 | MS.gene65420:CDS | 60.0% | |
| GCAAGCGGAGGAGGTGGAAT+GGG | + | chr4.3:87861316-87861335 | MS.gene65420:CDS | 60.0% | |
| GGAAAGGGAGGAGGTGGATC+TGG | + | chr4.3:87861361-87861380 | MS.gene65420:CDS | 60.0% | |
| GGAGCGGCCGGTGGAATTAT+CGG | + | chr4.3:87861466-87861485 | MS.gene65420:CDS | 60.0% | |
| GGAGGAGGTGGAATAGGAGG+TGG | + | chr4.3:87861382-87861401 | MS.gene65420:CDS | 60.0% | |
| GGAGGTGGAATAGGAGGTGG+AGG | + | chr4.3:87861385-87861404 | MS.gene65420:CDS | 60.0% | |
| GGATTTGGAGGAGGAGTGGC+AGG | + | chr4.3:87861442-87861461 | MS.gene65420:CDS | 60.0% | |
| GGTGGGAAGGGATTTGGAGG+AGG | + | chr4.3:87861433-87861452 | MS.gene65420:CDS | 60.0% | |
| TGCAAGCGGAGGAGGTGGAA+TGG | + | chr4.3:87861315-87861334 | MS.gene65420:CDS | 60.0% | |
| TTCGACGGGAGGAGGTGGAA+GGG | + | chr4.3:87861270-87861289 | MS.gene65420:CDS | 60.0% | |
| TTTCGACGGGAGGAGGTGGA+AGG | + | chr4.3:87861269-87861288 | MS.gene65420:CDS | 60.0% | |
| TTTGGAGGAGGAGTGGCAGG+TGG | + | chr4.3:87861445-87861464 | MS.gene65420:CDS | 60.0% | |
| ! | AGGTTTTCGACGGGAGGAGG+TGG | + | chr4.3:87861265-87861284 | MS.gene65420:CDS | 60.0% |
| ! | GCCATGAGGTTTTCGACGGG+AGG | + | chr4.3:87861259-87861278 | MS.gene65420:CDS | 60.0% |
| ! | GGAGGAGGTGGATTTGGAGG+TGG | + | chr4.3:87861337-87861356 | MS.gene65420:CDS | 60.0% |
| ! | GGAGGTGGATTTGGAGGTGG+AGG | + | chr4.3:87861340-87861359 | MS.gene65420:CDS | 60.0% |
| AGCGGAGGAGGTGGAATGGG+AGG | + | chr4.3:87861319-87861338 | MS.gene65420:CDS | 65.0% | |
| AGGAGGAGTGGCAGGTGGAG+CGG | + | chr4.3:87861450-87861469 | MS.gene65420:CDS | 65.0% | |
| GAGGTGGAATGGGAGGGGGT+GGG | + | chr4.3:87861416-87861435 | MS.gene65420:CDS | 65.0% | |
| GCCGGTGGAATTATCGGCGG+TGG | + | chr4.3:87861472-87861491 | MS.gene65420:CDS | 65.0% | |
| GCGGCCGGTGGAATTATCGG+CGG | + | chr4.3:87861469-87861488 | MS.gene65420:CDS | 65.0% | |
| GGAATGGGAGGGGGTGGGAA+GGG | + | chr4.3:87861421-87861440 | MS.gene65420:CDS | 65.0% | |
| GGAGGAGGTGGAATGGGAGG+AGG | + | chr4.3:87861322-87861341 | MS.gene65420:CDS | 65.0% | |
| GGAGGAGGTGGAATGGGAGG+GGG | + | chr4.3:87861322-87861341 | MS.gene65420:CDS | 65.0% | |
| GGAGGAGGTGGATCTGGAGG+AGG | + | chr4.3:87861367-87861386 | MS.gene65420:CDS | 65.0% | |
| GGAGGGGGTGGGAAGGGATT+TGG | + | chr4.3:87861427-87861446 | MS.gene65420:CDS | 65.0% | |
| GGAGGTGGAATGGGAGGAGG+TGG | + | chr4.3:87861325-87861344 | MS.gene65420:CDS | 65.0% | |
| GGAGGTGGAGGAAAGGGAGG+AGG | + | chr4.3:87861352-87861371 | MS.gene65420:CDS | 65.0% | |
| GGAGGTGGATCTGGAGGAGG+TGG | + | chr4.3:87861370-87861389 | MS.gene65420:CDS | 65.0% | |
| GGCGGCGCAGTTGCAAATCG+CGG | + | chr4.3:87861502-87861521 | MS.gene65420:CDS | 65.0% | |
| GGGAGGAGGTGGAATGGGAG+GGG | + | chr4.3:87861411-87861430 | MS.gene65420:CDS | 65.0% | |
| GGGGGTGGGAAGGGATTTGG+AGG | + | chr4.3:87861430-87861449 | MS.gene65420:CDS | 65.0% | |
| GGTGGAGGAAAGGGAGGAGG+TGG | + | chr4.3:87861355-87861374 | MS.gene65420:CDS | 65.0% | |
| TCGACGGGAGGAGGTGGAAG+GGG | + | chr4.3:87861271-87861290 | MS.gene65420:CDS | 65.0% | |
| TGGAATGGGAGGGGGTGGGA+AGG | + | chr4.3:87861420-87861439 | MS.gene65420:CDS | 65.0% | |
| ! | AGTGGAGGTGCAAGCGGAGG+AGG | + | chr4.3:87861307-87861326 | MS.gene65420:CDS | 65.0% |
| ACGGGAGGAGGTGGAAGGGG+AGG | + | chr4.3:87861274-87861293 | MS.gene65420:CDS | 70.0% | |
| GGAGGAGGTGGAAGGGGAGG+AGG | + | chr4.3:87861277-87861296 | MS.gene65420:CDS | 70.0% | |
| GGAGGTGGAAGGGGAGGAGG+TGG | + | chr4.3:87861280-87861299 | MS.gene65420:CDS | 70.0% | |
| GGAGGTGGAATGGGAGGGGG+TGG | + | chr4.3:87861415-87861434 | MS.gene65420:CDS | 70.0% | |
| ! | GGAGGTGCAAGCGGAGGAGG+TGG | + | chr4.3:87861310-87861329 | MS.gene65420:CDS | 70.0% |
| GGAGTGGCAGGTGGAGCGGC+CGG | + | chr4.3:87861454-87861473 | MS.gene65420:CDS | 75.0% | |
| ! | GTGGCAGGTGGAGCGGCCGG+TGG | + | chr4.3:87861457-87861476 | MS.gene65420:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 87860922 | 87861630 | 87860922 | ID=MS.gene65420 |
| chr4.3 | mRNA | 87860922 | 87861630 | 87860922 | ID=MS.gene65420.t1;Parent=MS.gene65420 |
| chr4.3 | exon | 87860922 | 87861039 | 87860922 | ID=MS.gene65420.t1.exon1;Parent=MS.gene65420.t1 |
| chr4.3 | CDS | 87860922 | 87861039 | 87860922 | ID=cds.MS.gene65420.t1;Parent=MS.gene65420.t1 |
| chr4.3 | exon | 87861158 | 87861630 | 87861158 | ID=MS.gene65420.t1.exon2;Parent=MS.gene65420.t1 |
| chr4.3 | CDS | 87861158 | 87861630 | 87861158 | ID=cds.MS.gene65420.t1;Parent=MS.gene65420.t1 |
| Gene Sequence |
| Protein sequence |
