Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66801.t1 | XP_003606227.2 | 98 | 344 | 7 | 0 | 1 | 344 | 1860 | 2203 | 7.00E-199 | 703 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66801.t1 | F4HW04 | 51.2 | 340 | 137 | 7 | 1 | 339 | 1845 | 2156 | 2.0e-90 | 334.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66801.t1 | G7JKW4 | 98.0 | 344 | 7 | 0 | 1 | 344 | 1860 | 2203 | 5.0e-199 | 703.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene66801 | 0.819175 | 1.33E-52 | -1.69E-46 |
| MS.gene050901 | MS.gene66801 | 0.804769 | 1.84E-49 | -1.69E-46 |
| MS.gene051021 | MS.gene66801 | 0.805842 | 1.10E-49 | -1.69E-46 |
| MS.gene051720 | MS.gene66801 | 0.804041 | 2.61E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene66801 | 0.804802 | 1.81E-49 | -1.69E-46 |
| MS.gene053144 | MS.gene66801 | 0.831269 | 1.84E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene66801 | 0.824493 | 7.84E-54 | -1.69E-46 |
| MS.gene053538 | MS.gene66801 | 0.800244 | 1.58E-48 | -1.69E-46 |
| MS.gene054584 | MS.gene66801 | 0.818358 | 2.04E-52 | -1.69E-46 |
| MS.gene055468 | MS.gene66801 | 0.806633 | 7.48E-50 | -1.69E-46 |
| MS.gene055537 | MS.gene66801 | 0.813718 | 2.22E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene66801 | -0.825825 | 3.79E-54 | -1.69E-46 |
| MS.gene056043 | MS.gene66801 | -0.808931 | 2.43E-50 | -1.69E-46 |
| MS.gene058492 | MS.gene66801 | 0.800617 | 1.33E-48 | -1.69E-46 |
| MS.gene061100 | MS.gene66801 | 0.814606 | 1.41E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 81 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGTGCTCATTGCTGTTCA+TGG | 0.279864 | 4.3:+46231396 | MS.gene66801:CDS |
| AGCTTGATCCACTGCAGTTC+TGG | 0.280855 | 4.3:+46231377 | MS.gene66801:CDS |
| CCAAGGCTGCATCCCCTCTA+TGG | 0.318478 | 4.3:-46232835 | None:intergenic |
| CTCATTGCTGTTCATGGACC+AGG | 0.343195 | 4.3:+46231402 | MS.gene66801:CDS |
| CCAGGTGAAAGCTGCACATT+TGG | 0.344280 | 4.3:+46235624 | MS.gene66801:CDS |
| CAAGCTCAATCCACTCAAAT+AGG | 0.344537 | 4.3:-46231360 | None:intergenic |
| GGATCATGAAACTCTGCTTC+TGG | 0.348029 | 4.3:-46234788 | None:intergenic |
| CTCAATTCATCTATATTCCT+TGG | 0.349223 | 4.3:+46232467 | MS.gene66801:CDS |
| TGCACCCCATCAATTAATAT+TGG | 0.354214 | 4.3:+46232544 | MS.gene66801:CDS |
| AACTTGAGACTCATCATTCA+TGG | 0.360580 | 4.3:-46232210 | None:intergenic |
| TGTTAAAATATGTTCGTGTC+AGG | 0.374366 | 4.3:+46234756 | MS.gene66801:CDS |
| TTGTAATGACTGCCGAGATT+TGG | 0.376425 | 4.3:+46235438 | MS.gene66801:CDS |
| CACGAAAACAAGCAGCAATC+AGG | 0.394362 | 4.3:+46232497 | MS.gene66801:CDS |
| GCAGCTCCAATATTAATTGA+TGG | 0.414885 | 4.3:-46232550 | None:intergenic |
| CACTCTTCGTTCAATAAAGT+TGG | 0.422129 | 4.3:-46235475 | None:intergenic |
| TGCAAGATCTGGTGTGTGTC+AGG | 0.431410 | 4.3:+46235596 | MS.gene66801:CDS |
| TGATATTGTTCTTCATATGA+AGG | 0.439826 | 4.3:+46232748 | MS.gene66801:CDS |
| GCAATACCACTTGCAAGATC+TGG | 0.445846 | 4.3:+46235585 | MS.gene66801:CDS |
| TTCTTCAGATTGCACGGCAA+AGG | 0.446278 | 4.3:+46235557 | MS.gene66801:CDS |
| TCTTCAGATTGCACGGCAAA+GGG | 0.452259 | 4.3:+46235558 | MS.gene66801:CDS |
| TCCATCACCTCACGGTCATA+AGG | 0.452613 | 4.3:-46235526 | None:intergenic |
| GTTTACCTGCAGATGACATT+GGG | 0.457652 | 4.3:-46234830 | None:intergenic |
| CCATAGAGGGGATGCAGCCT+TGG | 0.467396 | 4.3:+46232835 | MS.gene66801:CDS |
| TACTTCACTGACAAACTCCT+TGG | 0.467952 | 4.3:+46232716 | MS.gene66801:CDS |
| CGGTACATTCTTGAAGAAGT+TGG | 0.479004 | 4.3:-46235750 | None:intergenic |
| ATCTGGCCTTCATCAACTTA+CGG | 0.479090 | 4.3:+46232805 | MS.gene66801:CDS |
| GGGTAATATGAAGGAATGAC+AGG | 0.486179 | 4.3:-46234810 | None:intergenic |
| ACCGATCAGAGTACATCATC+TGG | 0.486883 | 4.3:+46232788 | MS.gene66801:CDS |
| CAGCTCCAATATTAATTGAT+GGG | 0.492466 | 4.3:-46232549 | None:intergenic |
| GCCTTATGACCGTGAGGTGA+TGG | 0.496369 | 4.3:+46235525 | MS.gene66801:CDS |
| CCAAATGTGCAGCTTTCACC+TGG | 0.497322 | 4.3:-46235624 | None:intergenic |
| GAGAAACTATGAAAACATAA+TGG | 0.500793 | 4.3:-46232447 | None:intergenic |
| TTTCTCTTGTAGTATAACTA+CGG | 0.506770 | 4.3:+46232161 | MS.gene66801:intron |
| AACTGAGTATATTAAAGAGC+AGG | 0.513944 | 4.3:+46232594 | MS.gene66801:CDS |
| AATATTAATTGATGGGGTGC+AGG | 0.514470 | 4.3:-46232542 | None:intergenic |
| GATGACATTGGGTAATATGA+AGG | 0.520105 | 4.3:-46234819 | None:intergenic |
| TGTTTACCTGCAGATGACAT+TGG | 0.522454 | 4.3:-46234831 | None:intergenic |
| TGTTCTTCATATGAAGGGGA+TGG | 0.522632 | 4.3:+46232754 | MS.gene66801:CDS |
| TTCTTCAAGAATGTACCGCC+TGG | 0.525712 | 4.3:+46235755 | MS.gene66801:CDS |
| GAACATCATGCTGCACACTT+TGG | 0.525881 | 4.3:-46232895 | None:intergenic |
| GTTAAAATATGTTCGTGTCA+GGG | 0.532452 | 4.3:+46234757 | MS.gene66801:CDS |
| AGATTGCACGGCAAAGGGAG+CGG | 0.536959 | 4.3:+46235563 | MS.gene66801:CDS |
| GCTGAGCAATGTGCATGTGC+AGG | 0.537479 | 4.3:+46235646 | MS.gene66801:CDS |
| TCACCTCACGGTCATAAGGC+TGG | 0.537763 | 4.3:-46235522 | None:intergenic |
| GTTCTTCATATGAAGGGGAT+GGG | 0.539182 | 4.3:+46232755 | MS.gene66801:CDS |
| TATTACCCAATGTCATCTGC+AGG | 0.540122 | 4.3:+46234825 | MS.gene66801:CDS |
| GATATTGTTCTTCATATGAA+GGG | 0.552114 | 4.3:+46232749 | MS.gene66801:CDS |
| CTTACGGATGATCTCCATAG+AGG | 0.552136 | 4.3:+46232821 | MS.gene66801:CDS |
| ATCAGGGCTTCAGTGCAGAA+TGG | 0.555230 | 4.3:+46232514 | MS.gene66801:CDS |
| CAACTTTATTGAACGAAGAG+TGG | 0.558024 | 4.3:+46235476 | MS.gene66801:CDS |
| AATTAATATTGGAGCTGCAG+AGG | 0.567141 | 4.3:+46232555 | MS.gene66801:CDS |
| ATGCTCTTCTTCAGATTGCA+CGG | 0.568370 | 4.3:+46235551 | MS.gene66801:CDS |
| ACGAAAACAAGCAGCAATCA+GGG | 0.569840 | 4.3:+46232498 | MS.gene66801:CDS |
| TGCAGGCTCATTTAAGTGCA+AGG | 0.570026 | 4.3:+46235663 | MS.gene66801:CDS |
| CATGCTGCACACTTTGGTCG+AGG | 0.577627 | 4.3:-46232889 | None:intergenic |
| ATGCTGCACACTTTGGTCGA+GGG | 0.583083 | 4.3:-46232888 | None:intergenic |
| GCCAGATGATGTACTCTGAT+CGG | 0.583702 | 4.3:-46232789 | None:intergenic |
| GATCATCCGTAAGTTGATGA+AGG | 0.585115 | 4.3:-46232811 | None:intergenic |
| AATATCAAGTTGGAATATTG+CGG | 0.585631 | 4.3:+46232238 | MS.gene66801:CDS |
| TTACGGATGATCTCCATAGA+GGG | 0.586946 | 4.3:+46232822 | MS.gene66801:CDS |
| CACGGCACAAGTCCAAATCT+CGG | 0.587227 | 4.3:-46235450 | None:intergenic |
| TTTGTAGAGACCTATTTGAG+TGG | 0.591355 | 4.3:+46231350 | None:intergenic |
| ATATTGTTCTTCATATGAAG+GGG | 0.596398 | 4.3:+46232750 | MS.gene66801:CDS |
| AGGCTGGCCACACTGAGGTA+CGG | 0.597076 | 4.3:-46235506 | None:intergenic |
| CGTTCAATAAAGTTGGATCA+CGG | 0.601966 | 4.3:-46235468 | None:intergenic |
| CTCTTGTAGTATAACTACGG+TGG | 0.608464 | 4.3:+46232164 | MS.gene66801:intron |
| AGCTCCAATATTAATTGATG+GGG | 0.632352 | 4.3:-46232548 | None:intergenic |
| CAATATCACGAACAACTCCA+AGG | 0.637306 | 4.3:-46232733 | None:intergenic |
| TAAGTGCAAGGAAGATGCAA+CGG | 0.637736 | 4.3:+46235675 | MS.gene66801:CDS |
| AAGTTGACATAATATCAAGT+TGG | 0.638167 | 4.3:+46232228 | MS.gene66801:CDS |
| GGTGTGTGTCAGGTGCAACC+AGG | 0.647075 | 4.3:+46235606 | MS.gene66801:CDS |
| CACACACCAGATCTTGCAAG+TGG | 0.651394 | 4.3:-46235591 | None:intergenic |
| GACATGCTTGATAAACTCCA+AGG | 0.655120 | 4.3:-46232852 | None:intergenic |
| AATGAGCACCAGAACTGCAG+TGG | 0.660938 | 4.3:-46231385 | None:intergenic |
| GGTAATATGAAGGAATGACA+GGG | 0.675974 | 4.3:-46234809 | None:intergenic |
| TACGGATGATCTCCATAGAG+GGG | 0.679993 | 4.3:+46232823 | MS.gene66801:CDS |
| GAGCATTCTCCATCACCTCA+CGG | 0.697338 | 4.3:-46235534 | None:intergenic |
| CATTGTGCCGTACCTCAGTG+TGG | 0.709519 | 4.3:+46235499 | MS.gene66801:CDS |
| TTTGAGTTCTAACATCCAGG+CGG | 0.744593 | 4.3:-46235770 | None:intergenic |
| TCATAAGGCTGGCCACACTG+AGG | 0.754890 | 4.3:-46235511 | None:intergenic |
| TGGCCAGCCTTATGACCGTG+AGG | 0.764587 | 4.3:+46235519 | MS.gene66801:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGATTATATGATATATAAT+CGG | - | chr4.3:46233593-46233612 | None:intergenic | 10.0% |
| !! | ACTAAATAAAAAATAATGTT+TGG | - | chr4.3:46235043-46235062 | None:intergenic | 10.0% |
| !! | TATTTACTGATATAAAAAAA+GGG | + | chr4.3:46233767-46233786 | MS.gene66801:intron | 10.0% |
| !!! | AAACATTATTTTTTATTTAG+TGG | + | chr4.3:46235042-46235061 | MS.gene66801:intron | 10.0% |
| !!! | TTCTTAGAATATAAATTTTT+AGG | + | chr4.3:46231676-46231695 | MS.gene66801:intron | 10.0% |
| !!! | TTTTTTTATATCAGTAAATA+GGG | - | chr4.3:46233767-46233786 | None:intergenic | 10.0% |
| !! | AATATGAAAATTTACAAACT+TGG | - | chr4.3:46234175-46234194 | None:intergenic | 15.0% |
| !! | ATAAATAAGAACAAGTTTAT+CGG | + | chr4.3:46231557-46231576 | MS.gene66801:intron | 15.0% |
| !! | ATAAGTAAAATATAGAAATG+AGG | - | chr4.3:46234371-46234390 | None:intergenic | 15.0% |
| !! | CACATTTATAATGATAATTA+TGG | + | chr4.3:46231581-46231600 | MS.gene66801:intron | 15.0% |
| !! | CTATTTACTGATATAAAAAA+AGG | + | chr4.3:46233766-46233785 | MS.gene66801:intron | 15.0% |
| !! | GAATTATCATTATAGTATTT+AGG | - | chr4.3:46233730-46233749 | None:intergenic | 15.0% |
| !! | TTTATAATGATAATTATGGA+TGG | + | chr4.3:46231585-46231604 | MS.gene66801:intron | 15.0% |
| !!! | CTTTTTTTATATCAGTAAAT+AGG | - | chr4.3:46233768-46233787 | None:intergenic | 15.0% |
| !!! | TACATGTAAAATAATCTTTT+TGG | + | chr4.3:46235158-46235177 | MS.gene66801:intron | 15.0% |
| !!! | TTCTAATAATTGTTTTATCT+GGG | - | chr4.3:46234493-46234512 | None:intergenic | 15.0% |
| !!! | TTGTAGAATTTTTGTTTTTT+GGG | - | chr4.3:46233408-46233427 | None:intergenic | 15.0% |
| !!! | TTTATTTTAGTGTCAAAATA+AGG | - | chr4.3:46233368-46233387 | None:intergenic | 15.0% |
| !!! | TTTCTAATAATTGTTTTATC+TGG | - | chr4.3:46234494-46234513 | None:intergenic | 15.0% |
| !!! | TTTGTAGAATTTTTGTTTTT+TGG | - | chr4.3:46233409-46233428 | None:intergenic | 15.0% |
| !!! | TTTTTCACATTAAATGAAAA+TGG | + | chr4.3:46234943-46234962 | MS.gene66801:intron | 15.0% |
| !!! | TTTTTTTTGTGGTTATATTT+CGG | + | chr4.3:46232412-46232431 | MS.gene66801:intron | 15.0% |
| !! | AAAAAAAAGTGATTATGGAA+TGG | - | chr4.3:46235396-46235415 | None:intergenic | 20.0% |
| !! | AAAAAAAATGGTATATTTGC+AGG | - | chr4.3:46233211-46233230 | None:intergenic | 20.0% |
| !! | AAAAAAATGGTATATTTGCA+GGG | - | chr4.3:46233210-46233229 | None:intergenic | 20.0% |
| !! | AATAAAGAACTAAATGCAAT+GGG | + | chr4.3:46232313-46232332 | MS.gene66801:intron | 20.0% |
| !! | AGAATAAGATAATCCAAAAT+TGG | + | chr4.3:46233697-46233716 | MS.gene66801:intron | 20.0% |
| !! | AGAGAAAAAAAAAGTGATTA+TGG | - | chr4.3:46235401-46235420 | None:intergenic | 20.0% |
| !! | AGGGATTAAGATAAAAAAAA+TGG | - | chr4.3:46233223-46233242 | None:intergenic | 20.0% |
| !! | GTGGTATATAATATAAACTA+TGG | + | chr4.3:46231871-46231890 | MS.gene66801:intron | 20.0% |
| !! | TAAATAAGAACAAGTTTATC+GGG | + | chr4.3:46231558-46231577 | MS.gene66801:intron | 20.0% |
| !! | TACAACAAAAAAAAGTTTCA+GGG | - | chr4.3:46233242-46233261 | None:intergenic | 20.0% |
| !! | TTACAACAAAAAAAAGTTTC+AGG | - | chr4.3:46233243-46233262 | None:intergenic | 20.0% |
| !! | TTTCTTCATGCTATATAAAA+TGG | + | chr4.3:46232040-46232059 | MS.gene66801:intron | 20.0% |
| !!! | AATATACAACTTTTTGCTTT+TGG | + | chr4.3:46233271-46233290 | MS.gene66801:intron | 20.0% |
| !!! | ACAGCTTTGTTTATATTTTT+TGG | + | chr4.3:46234894-46234913 | MS.gene66801:intron | 20.0% |
| !!! | ATTTTGAAAAATCTTCTTCA+TGG | + | chr4.3:46231730-46231749 | MS.gene66801:intron | 20.0% |
| !!! | GACTAAACAAATATTTTTAC+AGG | + | chr4.3:46233518-46233537 | MS.gene66801:intron | 20.0% |
| !!! | GGATTATCTTATTCTAAAAT+AGG | - | chr4.3:46233692-46233711 | None:intergenic | 20.0% |
| !!! | TATACAATTTTATAATGGTG+TGG | + | chr4.3:46231852-46231871 | MS.gene66801:intron | 20.0% |
| !!! | TCTAATAATTGTTTTATCTG+GGG | - | chr4.3:46234492-46234511 | None:intergenic | 20.0% |
| !!! | TGTAGAATTTTTGTTTTTTG+GGG | - | chr4.3:46233407-46233426 | None:intergenic | 20.0% |
| !!! | TTTAGGATTTTATCCAATTT+TGG | - | chr4.3:46233713-46233732 | None:intergenic | 20.0% |
| !!! | TTTTATATCAGTAAATAGGA+GGG | - | chr4.3:46233963-46233982 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTCTCTCTTTT+GGG | + | chr4.3:46235408-46235427 | MS.gene66801:intron | 20.0% |
| ! | AAACAACATTAAACTTGCAT+AGG | - | chr4.3:46232023-46232042 | None:intergenic | 25.0% |
| ! | AAATCTGTTCATAATGAAGT+TGG | + | chr4.3:46233322-46233341 | MS.gene66801:intron | 25.0% |
| ! | AAATTATCGAAGTTAACAAC+CGG | - | chr4.3:46235286-46235305 | None:intergenic | 25.0% |
| ! | AAATTTATTCATACTGGAAC+TGG | - | chr4.3:46233441-46233460 | None:intergenic | 25.0% |
| ! | AAGGTTCTTCATTTAATACA+AGG | + | chr4.3:46232358-46232377 | MS.gene66801:intron | 25.0% |
| ! | AAGTTGACATAATATCAAGT+TGG | + | chr4.3:46232228-46232247 | MS.gene66801:CDS | 25.0% |
| ! | AATATCTAAGTTAGCACTAT+AGG | - | chr4.3:46233048-46233067 | None:intergenic | 25.0% |
| ! | AATGATAATTATGGATGGTA+GGG | + | chr4.3:46231590-46231609 | MS.gene66801:intron | 25.0% |
| ! | ATATTGTTCTTCATATGAAG+GGG | + | chr4.3:46232750-46232769 | MS.gene66801:CDS | 25.0% |
| ! | ATGCATATTTGGGTATATAA+TGG | - | chr4.3:46232101-46232120 | None:intergenic | 25.0% |
| ! | ATTAAATGAAAATGGTTTCC+TGG | + | chr4.3:46234951-46234970 | MS.gene66801:intron | 25.0% |
| ! | CTCATCTAAAAAACTTCTTT+AGG | + | chr4.3:46233011-46233030 | MS.gene66801:intron | 25.0% |
| ! | GAATAAAGAACTAAATGCAA+TGG | + | chr4.3:46232312-46232331 | MS.gene66801:intron | 25.0% |
| ! | GAGAAACTATGAAAACATAA+TGG | - | chr4.3:46232450-46232469 | None:intergenic | 25.0% |
| ! | GATATTGTTCTTCATATGAA+GGG | + | chr4.3:46232749-46232768 | MS.gene66801:CDS | 25.0% |
| ! | TAATGATAATTATGGATGGT+AGG | + | chr4.3:46231589-46231608 | MS.gene66801:intron | 25.0% |
| ! | TAGAACTCAAAATTGAATGA+TGG | + | chr4.3:46235782-46235801 | MS.gene66801:CDS | 25.0% |
| ! | TCTCTTAGGAAATGTTATAT+TGG | + | chr4.3:46233166-46233185 | MS.gene66801:intron | 25.0% |
| ! | TGATATTGTTCTTCATATGA+AGG | + | chr4.3:46232748-46232767 | MS.gene66801:CDS | 25.0% |
| ! | TGGTAATCAATTGATAAGAT+GGG | - | chr4.3:46235023-46235042 | None:intergenic | 25.0% |
| ! | TTAATATCCGATTCCAAAAT+TGG | + | chr4.3:46231759-46231778 | MS.gene66801:intron | 25.0% |
| ! | TTCAAGCTAAAATTCATACA+AGG | - | chr4.3:46232295-46232314 | None:intergenic | 25.0% |
| ! | TTGTATCTTTATATGTGCAT+TGG | + | chr4.3:46235235-46235254 | MS.gene66801:intron | 25.0% |
| ! | TTTATATCAGTAAATAGGAG+GGG | - | chr4.3:46233962-46233981 | None:intergenic | 25.0% |
| ! | TTTCTCTTGTAGTATAACTA+CGG | + | chr4.3:46232161-46232180 | MS.gene66801:intron | 25.0% |
| !! | ACTGATCTTTTATCAAGAAA+GGG | + | chr4.3:46231797-46231816 | MS.gene66801:intron | 25.0% |
| !! | AGAAACTCAATTACCAATTT+TGG | - | chr4.3:46231775-46231794 | None:intergenic | 25.0% |
| !! | CAGTATGAATAAATTTTGCA+GGG | + | chr4.3:46233445-46233464 | MS.gene66801:intron | 25.0% |
| !! | GAAAAGCAATTGAGTTATTT+TGG | + | chr4.3:46234335-46234354 | MS.gene66801:intron | 25.0% |
| !! | GAAATTAAGACATGTTGATT+AGG | + | chr4.3:46234510-46234529 | MS.gene66801:intron | 25.0% |
| !! | GTTTTATATCAGTAAATAGG+AGG | - | chr4.3:46233964-46233983 | None:intergenic | 25.0% |
| !! | TTGGTAATCAATTGATAAGA+TGG | - | chr4.3:46235024-46235043 | None:intergenic | 25.0% |
| !!! | AATATACCACTTTTTGCTTT+TGG | - | chr4.3:46233492-46233511 | None:intergenic | 25.0% |
| !!! | AATATCAAGTTGGAATATTG+CGG | + | chr4.3:46232238-46232257 | MS.gene66801:CDS | 25.0% |
| !!! | ATCTTATTCTAAAATAGGCT+AGG | - | chr4.3:46233687-46233706 | None:intergenic | 25.0% |
| !!! | ATTATGGAATGGTTGTTTTA+TGG | - | chr4.3:46235385-46235404 | None:intergenic | 25.0% |
| !!! | ATTTCTAAAGCTTTTGCAAA+TGG | + | chr4.3:46231492-46231511 | MS.gene66801:intron | 25.0% |
| !!! | CGAGTTTTATATCAGTAAAT+AGG | - | chr4.3:46233967-46233986 | None:intergenic | 25.0% |
| !!! | CTAGAATTCTGCATATTTTT+TGG | + | chr4.3:46234197-46234216 | MS.gene66801:intron | 25.0% |
| !!! | CTTTTTTTTTCTCTCTCTTT+TGG | + | chr4.3:46235407-46235426 | MS.gene66801:intron | 25.0% |
| !!! | GTAGAATTTTTGTTTTTTGG+GGG | - | chr4.3:46233406-46233425 | None:intergenic | 25.0% |
| !!! | GTCAATGTTTTGAACTATTT+GGG | + | chr4.3:46235093-46235112 | MS.gene66801:intron | 25.0% |
| !!! | TAACTCACTTGGATTTTTTT+TGG | - | chr4.3:46232272-46232291 | None:intergenic | 25.0% |
| !!! | TAGAATTTTTGTTTTTTGGG+GGG | - | chr4.3:46233405-46233424 | None:intergenic | 25.0% |
| !!! | TCAATGTTTTGAACTATTTG+GGG | + | chr4.3:46235094-46235113 | MS.gene66801:intron | 25.0% |
| !!! | TCAATTACCAATTTTGGAAT+CGG | - | chr4.3:46231769-46231788 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTTGCTTAAGAA+AGG | + | chr4.3:46235134-46235153 | MS.gene66801:intron | 25.0% |
| AACTGAGTATATTAAAGAGC+AGG | + | chr4.3:46232594-46232613 | MS.gene66801:CDS | 30.0% | |
| AAGCAATGCTATCACAAATT+GGG | - | chr4.3:46232936-46232955 | None:intergenic | 30.0% | |
| AAGGACAAACGAATATTACA+GGG | - | chr4.3:46233349-46233368 | None:intergenic | 30.0% | |
| ACGTTGAAAGAAACAGTTAA+TGG | - | chr4.3:46235071-46235090 | None:intergenic | 30.0% | |
| AGCTCCAATATTAATTGATG+GGG | - | chr4.3:46232551-46232570 | None:intergenic | 30.0% | |
| ATAGGCTAGGAAAAGTAATT+AGG | - | chr4.3:46233674-46233693 | None:intergenic | 30.0% | |
| ATGATAATTATGGATGGTAG+GGG | + | chr4.3:46231591-46231610 | MS.gene66801:intron | 30.0% | |
| ATTAGATGCATTCATCCATT+CGG | - | chr4.3:46231969-46231988 | None:intergenic | 30.0% | |
| CAAAAAGTGGTATATTTGCA+AGG | + | chr4.3:46233496-46233515 | MS.gene66801:intron | 30.0% | |
| CAGCTCCAATATTAATTGAT+GGG | - | chr4.3:46232552-46232571 | None:intergenic | 30.0% | |
| CCTGCAAAATTTATTCATAC+TGG | - | chr4.3:46233447-46233466 | None:intergenic | 30.0% | |
| CTAAAAAACTTCTTTAGGTG+TGG | + | chr4.3:46233016-46233035 | MS.gene66801:intron | 30.0% | |
| CTCAATTCATCTATATTCCT+TGG | + | chr4.3:46232467-46232486 | MS.gene66801:CDS | 30.0% | |
| GCAAACTTAGATATTCTCTT+AGG | + | chr4.3:46233152-46233171 | MS.gene66801:intron | 30.0% | |
| GCATAATTGCATGCATATTT+GGG | - | chr4.3:46232111-46232130 | None:intergenic | 30.0% | |
| GGATTGAATTATGCAATCTT+GGG | + | chr4.3:46232061-46232080 | MS.gene66801:intron | 30.0% | |
| GGCAAAAATAGAATTGAACT+AGG | + | chr4.3:46231621-46231640 | MS.gene66801:intron | 30.0% | |
| GGTAATCAATTGATAAGATG+GGG | - | chr4.3:46235022-46235041 | None:intergenic | 30.0% | |
| GTGATATAAGACAATACTAG+CGG | + | chr4.3:46234401-46234420 | MS.gene66801:intron | 30.0% | |
| GTTAAAATATGTTCGTGTCA+GGG | + | chr4.3:46234757-46234776 | MS.gene66801:CDS | 30.0% | |
| TAAGCAATGCTATCACAAAT+TGG | - | chr4.3:46232937-46232956 | None:intergenic | 30.0% | |
| TAAGGACAAACGAATATTAC+AGG | - | chr4.3:46233350-46233369 | None:intergenic | 30.0% | |
| TAATCCTGTTTAGTAATGAC+CGG | + | chr4.3:46235264-46235283 | MS.gene66801:intron | 30.0% | |
| TAATGACCAAAAGCAAAAAG+TGG | + | chr4.3:46233483-46233502 | MS.gene66801:intron | 30.0% | |
| TCTTGTGTAAAAACAGGATA+AGG | - | chr4.3:46233867-46233886 | None:intergenic | 30.0% | |
| TGATCTCCTATATTTCTTCT+TGG | + | chr4.3:46234676-46234695 | MS.gene66801:intron | 30.0% | |
| TGCATAATTGCATGCATATT+TGG | - | chr4.3:46232112-46232131 | None:intergenic | 30.0% | |
| TGGATTGAATTATGCAATCT+TGG | + | chr4.3:46232060-46232079 | MS.gene66801:intron | 30.0% | |
| TGTGAAGGGCTTATATTTAT+TGG | + | chr4.3:46234649-46234668 | MS.gene66801:intron | 30.0% | |
| TGTTAAAATATGTTCGTGTC+AGG | + | chr4.3:46234756-46234775 | MS.gene66801:CDS | 30.0% | |
| TTCATCTAAAGAACTCCTTT+AGG | + | chr4.3:46233110-46233129 | MS.gene66801:intron | 30.0% | |
| TTTGGTTGCAAGATATATCT+AGG | + | chr4.3:46231458-46231477 | MS.gene66801:intron | 30.0% | |
| ! | AATCGGCTTAAATATGCAAA+TGG | - | chr4.3:46233576-46233595 | None:intergenic | 30.0% |
| ! | ATCAACTCAATGGATTTCAA+AGG | + | chr4.3:46232339-46232358 | MS.gene66801:intron | 30.0% |
| ! | CATTATGAACAGATTTTGCA+AGG | - | chr4.3:46233318-46233337 | None:intergenic | 30.0% |
| ! | CCAGTATGAATAAATTTTGC+AGG | + | chr4.3:46233444-46233463 | MS.gene66801:intron | 30.0% |
| ! | CTCTCTGTAAATTTTAAGCT+TGG | + | chr4.3:46231928-46231947 | MS.gene66801:intron | 30.0% |
| ! | GACTGATCTTTTATCAAGAA+AGG | + | chr4.3:46231796-46231815 | MS.gene66801:intron | 30.0% |
| ! | GTTATATTTCGGTTTTCTAC+AGG | + | chr4.3:46232423-46232442 | MS.gene66801:intron | 30.0% |
| ! | TTAACTGTTTCTTTCAACGT+CGG | + | chr4.3:46235071-46235090 | MS.gene66801:intron | 30.0% |
| ! | TTTGGAATATCAATAGCATC+AGG | + | chr4.3:46234912-46234931 | MS.gene66801:intron | 30.0% |
| !! | CTTTTGTCTTTTTCGCATTA+TGG | + | chr4.3:46234040-46234059 | MS.gene66801:intron | 30.0% |
| !! | GGTCAATGTTTTGAACTATT+TGG | + | chr4.3:46235092-46235111 | MS.gene66801:intron | 30.0% |
| !!! | AATTTTGAGTTCTAACATCC+AGG | - | chr4.3:46235776-46235795 | None:intergenic | 30.0% |
| !!! | TTATCCTGTTTTTACACAAG+AGG | + | chr4.3:46233866-46233885 | MS.gene66801:intron | 30.0% |
| AAATTACATATCGTCTCGTC+GGG | + | chr4.3:46235209-46235228 | MS.gene66801:intron | 35.0% | |
| AACTTCTAAGTAACCCCAAA+AGG | - | chr4.3:46234258-46234277 | None:intergenic | 35.0% | |
| AACTTGAGACTCATCATTCA+TGG | - | chr4.3:46232213-46232232 | None:intergenic | 35.0% | |
| AATATCTAAGTTTGCGCTAG+AGG | - | chr4.3:46233147-46233166 | None:intergenic | 35.0% | |
| AATATTAATTGATGGGGTGC+AGG | - | chr4.3:46232545-46232564 | None:intergenic | 35.0% | |
| AATTAATATTGGAGCTGCAG+AGG | + | chr4.3:46232555-46232574 | MS.gene66801:CDS | 35.0% | |
| ACACAATCAGAACTATCACT+TGG | - | chr4.3:46234706-46234725 | None:intergenic | 35.0% | |
| ATCTGCAGGTAAACAAGTAT+AGG | + | chr4.3:46234839-46234858 | MS.gene66801:intron | 35.0% | |
| CAACTTTATTGAACGAAGAG+TGG | + | chr4.3:46235476-46235495 | MS.gene66801:CDS | 35.0% | |
| CACTCTTCGTTCAATAAAGT+TGG | - | chr4.3:46235478-46235497 | None:intergenic | 35.0% | |
| CGTTCAATAAAGTTGGATCA+CGG | - | chr4.3:46235471-46235490 | None:intergenic | 35.0% | |
| CTAGGAAATCCAATAATGTG+AGG | + | chr4.3:46231639-46231658 | MS.gene66801:intron | 35.0% | |
| GAAAAATCTTCTTCATGGCA+AGG | + | chr4.3:46231735-46231754 | MS.gene66801:intron | 35.0% | |
| GAAATTACATATCGTCTCGT+CGG | + | chr4.3:46235208-46235227 | MS.gene66801:intron | 35.0% | |
| GATATAAAAAAAGGGCAACC+CGG | + | chr4.3:46233775-46233794 | MS.gene66801:intron | 35.0% | |
| GATGACATTGGGTAATATGA+AGG | - | chr4.3:46234822-46234841 | None:intergenic | 35.0% | |
| GCAGCTCCAATATTAATTGA+TGG | - | chr4.3:46232553-46232572 | None:intergenic | 35.0% | |
| GGATGCAACAATGTTATTCA+TGG | + | chr4.3:46235358-46235377 | MS.gene66801:intron | 35.0% | |
| GGTAATATGAAGGAATGACA+GGG | - | chr4.3:46234812-46234831 | None:intergenic | 35.0% | |
| GGTTCACCAAGAAGAAATAT+AGG | - | chr4.3:46234685-46234704 | None:intergenic | 35.0% | |
| TGCACCCCATCAATTAATAT+TGG | + | chr4.3:46232544-46232563 | MS.gene66801:CDS | 35.0% | |
| TTAAACTTGCATAGGCGTTA+TGG | - | chr4.3:46232015-46232034 | None:intergenic | 35.0% | |
| TTAAAGAGCAGGTATGACAA+TGG | + | chr4.3:46232605-46232624 | MS.gene66801:intron | 35.0% | |
| TTCATACAAGGTAACTCACT+TGG | - | chr4.3:46232283-46232302 | None:intergenic | 35.0% | |
| TTCTGATTGTGTCTTTCACT+TGG | + | chr4.3:46234714-46234733 | MS.gene66801:intron | 35.0% | |
| TTTAAGCTTGGATCTCATGT+TGG | + | chr4.3:46231940-46231959 | MS.gene66801:intron | 35.0% | |
| ! | AATTAGGTTGTTTGCCTTGT+GGG | - | chr4.3:46233658-46233677 | None:intergenic | 35.0% |
| ! | ATCTTGTTTCTTCGTTATGC+TGG | - | chr4.3:46234582-46234601 | None:intergenic | 35.0% |
| ! | TAATTAGGTTGTTTGCCTTG+TGG | - | chr4.3:46233659-46233678 | None:intergenic | 35.0% |
| ! | TCTTGTTTCTTCGTTATGCT+GGG | - | chr4.3:46234581-46234600 | None:intergenic | 35.0% |
| ! | TGTTTTCGTGTATAGTTCCA+AGG | - | chr4.3:46232487-46232506 | None:intergenic | 35.0% |
| !! | ACCAAACTCTTGTTGTTTGT+AGG | + | chr4.3:46233548-46233567 | MS.gene66801:intron | 35.0% |
| !! | ACTCAATTGCTTTTCCAATC+AGG | - | chr4.3:46234330-46234349 | None:intergenic | 35.0% |
| !! | CCAAACTCTTGTTGTTTGTA+GGG | + | chr4.3:46233549-46233568 | MS.gene66801:intron | 35.0% |
| !! | CTCAATTGCTTTTCCAATCA+GGG | - | chr4.3:46234329-46234348 | None:intergenic | 35.0% |
| !! | TAGTTGTGCGATTCTTGTTT+TGG | + | chr4.3:46234129-46234148 | MS.gene66801:intron | 35.0% |
| !! | TTTTGAACTATTTGGGGCAT+AGG | + | chr4.3:46235100-46235119 | MS.gene66801:intron | 35.0% |
| !!! | TTTTTCCCTCTGTTGGTTTT+TGG | + | chr4.3:46231440-46231459 | MS.gene66801:intron | 35.0% |
| AAACAAAGCAAGACCAAACC+TGG | - | chr4.3:46231423-46231442 | None:intergenic | 40.0% | |
| AAATGGCCTTTGGACTTATC+TGG | + | chr4.3:46231509-46231528 | MS.gene66801:intron | 40.0% | |
| AACTACCTCTCACATGTCAT+AGG | + | chr4.3:46234988-46235007 | MS.gene66801:intron | 40.0% | |
| AATGGCCTTTGGACTTATCT+GGG | + | chr4.3:46231510-46231529 | MS.gene66801:intron | 40.0% | |
| ACAACCGGTCATTACTAAAC+AGG | - | chr4.3:46235271-46235290 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.3:46233873-46233892 | None:intergenic | 40.0% | |
| ACCTGTTCACCTCACATTAT+TGG | - | chr4.3:46231651-46231670 | None:intergenic | 40.0% | |
| ACGAAAACAAGCAGCAATCA+GGG | + | chr4.3:46232498-46232517 | MS.gene66801:CDS | 40.0% | |
| AGCCAGTATCTTAGAGTTGA+TGG | - | chr4.3:46234284-46234303 | None:intergenic | 40.0% | |
| ATGCTCTTCTTCAGATTGCA+CGG | + | chr4.3:46235551-46235570 | MS.gene66801:CDS | 40.0% | |
| CAAGCTCAATCCACTCAAAT+AGG | - | chr4.3:46231363-46231382 | None:intergenic | 40.0% | |
| CAATATCACGAACAACTCCA+AGG | - | chr4.3:46232736-46232755 | None:intergenic | 40.0% | |
| CAATGGGAAGATCAACTCAA+TGG | + | chr4.3:46232329-46232348 | MS.gene66801:intron | 40.0% | |
| CCCTACAAACAACAAGAGTT+TGG | - | chr4.3:46233552-46233571 | None:intergenic | 40.0% | |
| CGGAATTTCGCAAAAAGATG+CGG | + | chr4.3:46235695-46235714 | MS.gene66801:CDS | 40.0% | |
| CGGTACATTCTTGAAGAAGT+TGG | - | chr4.3:46235753-46235772 | None:intergenic | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | - | chr4.3:46233841-46233860 | None:intergenic | 40.0% | |
| CGTCTAAAAGTTCACACTGA+AGG | + | chr4.3:46233619-46233638 | MS.gene66801:intron | 40.0% | |
| CTAAAGAACTCCTTTAGGTG+TGG | + | chr4.3:46233115-46233134 | MS.gene66801:intron | 40.0% | |
| CTCTTGTAGTATAACTACGG+TGG | + | chr4.3:46232164-46232183 | MS.gene66801:intron | 40.0% | |
| GACATGCTTGATAAACTCCA+AGG | - | chr4.3:46232855-46232874 | None:intergenic | 40.0% | |
| GGAATTTCGCAAAAAGATGC+GGG | + | chr4.3:46235696-46235715 | MS.gene66801:CDS | 40.0% | |
| GGGTAATATGAAGGAATGAC+AGG | - | chr4.3:46234813-46234832 | None:intergenic | 40.0% | |
| GTTCTTCATATGAAGGGGAT+GGG | + | chr4.3:46232755-46232774 | MS.gene66801:CDS | 40.0% | |
| GTTGTTGTCATGTGACTGAA+AGG | - | chr4.3:46233917-46233936 | None:intergenic | 40.0% | |
| GTTTACCTGCAGATGACATT+GGG | - | chr4.3:46234833-46234852 | None:intergenic | 40.0% | |
| TAAGTGCAAGGAAGATGCAA+CGG | + | chr4.3:46235675-46235694 | MS.gene66801:CDS | 40.0% | |
| TACTTCACTGACAAACTCCT+TGG | + | chr4.3:46232716-46232735 | MS.gene66801:CDS | 40.0% | |
| TAGAACCTATGACATGTGAG+AGG | - | chr4.3:46234996-46235015 | None:intergenic | 40.0% | |
| TATTACCCAATGTCATCTGC+AGG | + | chr4.3:46234825-46234844 | MS.gene66801:CDS | 40.0% | |
| TCCAATAATGTGAGGTGAAC+AGG | + | chr4.3:46231647-46231666 | MS.gene66801:intron | 40.0% | |
| TGCAACCAAAAACCAACAGA+GGG | - | chr4.3:46231448-46231467 | None:intergenic | 40.0% | |
| TGTTCTTCATATGAAGGGGA+TGG | + | chr4.3:46232754-46232773 | MS.gene66801:CDS | 40.0% | |
| TGTTTACCTGCAGATGACAT+TGG | - | chr4.3:46234834-46234853 | None:intergenic | 40.0% | |
| TTACGGATGATCTCCATAGA+GGG | + | chr4.3:46232822-46232841 | MS.gene66801:CDS | 40.0% | |
| TTATGCTGGGGATTAAGAAC+TGG | - | chr4.3:46234568-46234587 | None:intergenic | 40.0% | |
| TTGCAACCAAAAACCAACAG+AGG | - | chr4.3:46231449-46231468 | None:intergenic | 40.0% | |
| TTGTAATGACTGCCGAGATT+TGG | + | chr4.3:46235438-46235457 | MS.gene66801:CDS | 40.0% | |
| TTTAGATGAATCCTGCCAAG+AGG | - | chr4.3:46233100-46233119 | None:intergenic | 40.0% | |
| ! | AAGCTTTTGCAAATGGCCTT+TGG | + | chr4.3:46231499-46231518 | MS.gene66801:intron | 40.0% |
| ! | ATCTGGCCTTCATCAACTTA+CGG | + | chr4.3:46232805-46232824 | MS.gene66801:CDS | 40.0% |
| ! | ATGGCTTCATCAGATTTTGC+TGG | - | chr4.3:46232194-46232213 | None:intergenic | 40.0% |
| ! | ATTAGGTTGTTTGCCTTGTG+GGG | - | chr4.3:46233657-46233676 | None:intergenic | 40.0% |
| ! | CATAAGGATTTGAAGTGGCA+TGG | + | chr4.3:46232631-46232650 | MS.gene66801:intron | 40.0% |
| ! | CTTGTTTCTTCGTTATGCTG+GGG | - | chr4.3:46234580-46234599 | None:intergenic | 40.0% |
| ! | GTGTCCTTATGACACCTTTT+GGG | + | chr4.3:46234241-46234260 | MS.gene66801:intron | 40.0% |
| ! | TGTCCTTATGACACCTTTTG+GGG | + | chr4.3:46234242-46234261 | MS.gene66801:intron | 40.0% |
| ! | TTTGAGTTCTAACATCCAGG+CGG | - | chr4.3:46235773-46235792 | None:intergenic | 40.0% |
| !! | AAAAGGTGTCATAAGGACAC+GGG | - | chr4.3:46234241-46234260 | None:intergenic | 40.0% |
| !! | AGTTTTAGTCAAACTCGACC+AGG | - | chr4.3:46234972-46234991 | None:intergenic | 40.0% |
| !! | CAAAAGGTGTCATAAGGACA+CGG | - | chr4.3:46234242-46234261 | None:intergenic | 40.0% |
| !! | GACCATCAACTCTAAGATAC+TGG | + | chr4.3:46234279-46234298 | MS.gene66801:intron | 40.0% |
| !! | GATCATCCGTAAGTTGATGA+AGG | - | chr4.3:46232814-46232833 | None:intergenic | 40.0% |
| !! | TAACCCCAAAAGGTGTCATA+AGG | - | chr4.3:46234248-46234267 | None:intergenic | 40.0% |
| !! | TATAGAAATGAGGCACTGCA+AGG | - | chr4.3:46234361-46234380 | None:intergenic | 40.0% |
| !! | TTCGCATTATGGTCTTGTGT+TGG | + | chr4.3:46234051-46234070 | MS.gene66801:intron | 40.0% |
| !!! | TGCTTTGTTTTTCCCTCTGT+TGG | + | chr4.3:46231433-46231452 | MS.gene66801:intron | 40.0% |
| ACCGATCAGAGTACATCATC+TGG | + | chr4.3:46232788-46232807 | MS.gene66801:CDS | 45.0% | |
| ACTATGGCTTCTGCTAGTAG+TGG | + | chr4.3:46231887-46231906 | MS.gene66801:intron | 45.0% | |
| ATGGATGGTAGGGGATAGAA+TGG | + | chr4.3:46231600-46231619 | MS.gene66801:intron | 45.0% | |
| ATGGCCTTTGGACTTATCTG+GGG | + | chr4.3:46231511-46231530 | MS.gene66801:intron | 45.0% | |
| CACGAAAACAAGCAGCAATC+AGG | + | chr4.3:46232497-46232516 | MS.gene66801:CDS | 45.0% | |
| CTTACGGATGATCTCCATAG+AGG | + | chr4.3:46232821-46232840 | MS.gene66801:CDS | 45.0% | |
| GAACATCATGCTGCACACTT+TGG | - | chr4.3:46232898-46232917 | None:intergenic | 45.0% | |
| GATTGTGTCTTTCACTTGGC+AGG | + | chr4.3:46234718-46234737 | MS.gene66801:intron | 45.0% | |
| GCAATACCACTTGCAAGATC+TGG | + | chr4.3:46235585-46235604 | MS.gene66801:CDS | 45.0% | |
| GCATATTTACAGACCCCACA+AGG | + | chr4.3:46233641-46233660 | MS.gene66801:intron | 45.0% | |
| GCCAGATGATGTACTCTGAT+CGG | - | chr4.3:46232792-46232811 | None:intergenic | 45.0% | |
| GCCTTAGTAGTCTGTGTGAA+GGG | + | chr4.3:46234635-46234654 | MS.gene66801:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | - | chr4.3:46233842-46233861 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | - | chr4.3:46233845-46233864 | None:intergenic | 45.0% | |
| GGATCATGAAACTCTGCTTC+TGG | - | chr4.3:46234791-46234810 | None:intergenic | 45.0% | |
| GGCAGCATAAGGATTTGAAG+TGG | + | chr4.3:46232626-46232645 | MS.gene66801:intron | 45.0% | |
| GGTATGACAATGGCAGCATA+AGG | + | chr4.3:46232615-46232634 | MS.gene66801:intron | 45.0% | |
| GTAAATAGGAGGGGTAACCT+TGG | - | chr4.3:46233953-46233972 | None:intergenic | 45.0% | |
| GTCATGTGACTGAAAGGTCA+CGG | - | chr4.3:46233911-46233930 | None:intergenic | 45.0% | |
| TACGGATGATCTCCATAGAG+GGG | + | chr4.3:46232823-46232842 | MS.gene66801:CDS | 45.0% | |
| TCATGTGACTGAAAGGTCAC+GGG | - | chr4.3:46233910-46233929 | None:intergenic | 45.0% | |
| TCTTCAGATTGCACGGCAAA+GGG | + | chr4.3:46235558-46235577 | MS.gene66801:CDS | 45.0% | |
| TGCAGGCTCATTTAAGTGCA+AGG | + | chr4.3:46235663-46235682 | MS.gene66801:CDS | 45.0% | |
| TGCCTTAGTAGTCTGTGTGA+AGG | + | chr4.3:46234634-46234653 | MS.gene66801:intron | 45.0% | |
| TGTAATGATCCAGCCCTGAT+TGG | + | chr4.3:46234313-46234332 | MS.gene66801:intron | 45.0% | |
| TTCTTCAAGAATGTACCGCC+TGG | + | chr4.3:46235755-46235774 | MS.gene66801:CDS | 45.0% | |
| TTCTTCAGATTGCACGGCAA+AGG | + | chr4.3:46235557-46235576 | MS.gene66801:CDS | 45.0% | |
| ! | CGTGTCCTTATGACACCTTT+TGG | + | chr4.3:46234240-46234259 | MS.gene66801:intron | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.3:46233877-46233896 | MS.gene66801:intron | 45.0% |
| !! | ATCTCATGTTGGTGACCGAA+TGG | + | chr4.3:46231951-46231970 | MS.gene66801:intron | 45.0% |
| !! | ATTGCTTTTCCAATCAGGGC+TGG | - | chr4.3:46234325-46234344 | None:intergenic | 45.0% |
| !! | GAGGAGTATTCCACACCTAA+AGG | - | chr4.3:46233128-46233147 | None:intergenic | 45.0% |
| !!! | ATTTTTTTTTTTTTTTTTTG+TGG | + | chr4.3:46232401-46232420 | MS.gene66801:intron | 5.0% |
| !!! | TAATATATACAATTTTATAA+TGG | + | chr4.3:46231847-46231866 | MS.gene66801:intron | 5.0% |
| AAGCCCCCAGATAAGTCCAA+AGG | - | chr4.3:46231518-46231537 | None:intergenic | 50.0% | |
| AATGAGCACCAGAACTGCAG+TGG | - | chr4.3:46231388-46231407 | None:intergenic | 50.0% | |
| AGCTTGATCCACTGCAGTTC+TGG | + | chr4.3:46231377-46231396 | MS.gene66801:CDS | 50.0% | |
| ATCAGGGCTTCAGTGCAGAA+TGG | + | chr4.3:46232514-46232533 | MS.gene66801:CDS | 50.0% | |
| ATGCTGCACACTTTGGTCGA+GGG | - | chr4.3:46232891-46232910 | None:intergenic | 50.0% | |
| CAACTTTACCAGTTGCGCCA+AGG | + | chr4.3:46233933-46233952 | MS.gene66801:intron | 50.0% | |
| CACACACCAGATCTTGCAAG+TGG | - | chr4.3:46235594-46235613 | None:intergenic | 50.0% | |
| CACGGCACAAGTCCAAATCT+CGG | - | chr4.3:46235453-46235472 | None:intergenic | 50.0% | |
| CCAAATGTGCAGCTTTCACC+TGG | - | chr4.3:46235627-46235646 | None:intergenic | 50.0% | |
| CCAGGTGAAAGCTGCACATT+TGG | + | chr4.3:46235624-46235643 | MS.gene66801:CDS | 50.0% | |
| GAGCATTCTCCATCACCTCA+CGG | - | chr4.3:46235537-46235556 | None:intergenic | 50.0% | |
| GCCCTTCACACAGACTACTA+AGG | - | chr4.3:46234639-46234658 | None:intergenic | 50.0% | |
| TCCATCACCTCACGGTCATA+AGG | - | chr4.3:46235529-46235548 | None:intergenic | 50.0% | |
| TGCAAGATCTGGTGTGTGTC+AGG | + | chr4.3:46235596-46235615 | MS.gene66801:CDS | 50.0% | |
| TGCTGTTCATGGACCAGGTT+TGG | + | chr4.3:46231407-46231426 | MS.gene66801:intron | 50.0% | |
| TGGCCTTTGGACTTATCTGG+GGG | + | chr4.3:46231512-46231531 | MS.gene66801:intron | 50.0% | |
| TTTAGATGAGTCCTGCCACG+AGG | - | chr4.3:46233001-46233020 | None:intergenic | 50.0% | |
| ! | CTCATTGCTGTTCATGGACC+AGG | + | chr4.3:46231402-46231421 | MS.gene66801:CDS | 50.0% |
| ! | CTGGTGCTCATTGCTGTTCA+TGG | + | chr4.3:46231396-46231415 | MS.gene66801:CDS | 50.0% |
| !! | CAATCCAAGAGTGCTCCTCT+TGG | + | chr4.3:46233082-46233101 | MS.gene66801:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.3:46233898-46233917 | None:intergenic | 55.0% | |
| ACTAAAGCTCCCGCATACGC+AGG | + | chr4.3:46233801-46233820 | MS.gene66801:intron | 55.0% | |
| AGATTGCACGGCAAAGGGAG+CGG | + | chr4.3:46235563-46235582 | MS.gene66801:CDS | 55.0% | |
| CATGCTGCACACTTTGGTCG+AGG | - | chr4.3:46232892-46232911 | None:intergenic | 55.0% | |
| CATTGTGCCGTACCTCAGTG+TGG | + | chr4.3:46235499-46235518 | MS.gene66801:CDS | 55.0% | |
| CTAAAGCTCCCGCATACGCA+GGG | + | chr4.3:46233802-46233821 | MS.gene66801:intron | 55.0% | |
| GCCTTATGACCGTGAGGTGA+TGG | + | chr4.3:46235525-46235544 | MS.gene66801:CDS | 55.0% | |
| GCTGAGCAATGTGCATGTGC+AGG | + | chr4.3:46235646-46235665 | MS.gene66801:CDS | 55.0% | |
| TCACCTCACGGTCATAAGGC+TGG | - | chr4.3:46235525-46235544 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr4.3:46233797-46233816 | None:intergenic | 55.0% |
| ! | TCATAAGGCTGGCCACACTG+AGG | - | chr4.3:46235514-46235533 | None:intergenic | 55.0% |
| !! | CAATCGAAGAGTGCTCCTCG+TGG | + | chr4.3:46232983-46233002 | MS.gene66801:intron | 55.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.3:46233944-46233963 | None:intergenic | 60.0% | |
| CCAAGGCTGCATCCCCTCTA+TGG | - | chr4.3:46232838-46232857 | None:intergenic | 60.0% | |
| CCATAGAGGGGATGCAGCCT+TGG | + | chr4.3:46232835-46232854 | MS.gene66801:CDS | 60.0% | |
| GGTGTGTGTCAGGTGCAACC+AGG | + | chr4.3:46235606-46235625 | MS.gene66801:CDS | 60.0% | |
| ! | AGGCTGGCCACACTGAGGTA+CGG | - | chr4.3:46235509-46235528 | None:intergenic | 60.0% |
| ! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4.3:46233829-46233848 | None:intergenic | 60.0% |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr4.3:46233796-46233815 | None:intergenic | 60.0% |
| ! | TGGCCAGCCTTATGACCGTG+AGG | + | chr4.3:46235519-46235538 | MS.gene66801:CDS | 60.0% |
| !! | CCAAGAGTGCTCCTCTTGGC+AGG | + | chr4.3:46233086-46233105 | MS.gene66801:intron | 60.0% |
| !! | CCTGCCAAGAGGAGCACTCT+TGG | - | chr4.3:46233089-46233108 | None:intergenic | 60.0% |
| CATACGCAGGGTCCGGGAAG+GGG | + | chr4.3:46233814-46233833 | MS.gene66801:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr4.3:46233827-46233846 | MS.gene66801:intron | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | - | chr4.3:46233814-46233833 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | + | chr4.3:46233813-46233832 | MS.gene66801:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | - | chr4.3:46233813-46233832 | None:intergenic | 65.0% | |
| !! | CGAAGAGTGCTCCTCGTGGC+AGG | + | chr4.3:46232987-46233006 | MS.gene66801:intron | 65.0% |
| CGCATACGCAGGGTCCGGGA+AGG | + | chr4.3:46233812-46233831 | MS.gene66801:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | + | chr4.3:46233808-46233827 | MS.gene66801:intron | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | + | chr4.3:46233807-46233826 | MS.gene66801:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 46231357 | 46235801 | 46231357 | ID=MS.gene66801 |
| chr4.3 | mRNA | 46231357 | 46235801 | 46231357 | ID=MS.gene66801.t1;Parent=MS.gene66801 |
| chr4.3 | exon | 46231357 | 46231423 | 46231357 | ID=MS.gene66801.t1.exon1;Parent=MS.gene66801.t1 |
| chr4.3 | CDS | 46231357 | 46231423 | 46231357 | ID=cds.MS.gene66801.t1;Parent=MS.gene66801.t1 |
| chr4.3 | exon | 46232173 | 46232283 | 46232173 | ID=MS.gene66801.t1.exon2;Parent=MS.gene66801.t1 |
| chr4.3 | CDS | 46232173 | 46232283 | 46232173 | ID=cds.MS.gene66801.t1;Parent=MS.gene66801.t1 |
| chr4.3 | exon | 46232445 | 46232615 | 46232445 | ID=MS.gene66801.t1.exon3;Parent=MS.gene66801.t1 |
| chr4.3 | CDS | 46232445 | 46232615 | 46232445 | ID=cds.MS.gene66801.t1;Parent=MS.gene66801.t1 |
| chr4.3 | exon | 46232707 | 46232919 | 46232707 | ID=MS.gene66801.t1.exon4;Parent=MS.gene66801.t1 |
| chr4.3 | CDS | 46232707 | 46232919 | 46232707 | ID=cds.MS.gene66801.t1;Parent=MS.gene66801.t1 |
| chr4.3 | exon | 46234740 | 46234846 | 46234740 | ID=MS.gene66801.t1.exon5;Parent=MS.gene66801.t1 |
| chr4.3 | CDS | 46234740 | 46234846 | 46234740 | ID=cds.MS.gene66801.t1;Parent=MS.gene66801.t1 |
| chr4.3 | exon | 46235435 | 46235801 | 46235435 | ID=MS.gene66801.t1.exon6;Parent=MS.gene66801.t1 |
| chr4.3 | CDS | 46235435 | 46235801 | 46235435 | ID=cds.MS.gene66801.t1;Parent=MS.gene66801.t1 |
| Gene Sequence |
| Protein sequence |
