Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66960.t1 | XP_013451584.1 | 96.4 | 250 | 9 | 0 | 1 | 250 | 1 | 250 | 1.10E-129 | 472.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66960.t1 | Q5VR89 | 54.4 | 248 | 105 | 3 | 2 | 246 | 3 | 245 | 3.2e-69 | 263.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66960.t1 | A0A072U7F2 | 96.4 | 250 | 9 | 0 | 1 | 250 | 1 | 250 | 8.0e-130 | 472.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051699 | MS.gene66960 | 0.820554 | 6.45E-53 | -1.69E-46 |
| MS.gene051832 | MS.gene66960 | 0.842026 | 3.32E-58 | -1.69E-46 |
| MS.gene053045 | MS.gene66960 | 0.816618 | 5.04E-52 | -1.69E-46 |
| MS.gene053189 | MS.gene66960 | 0.813192 | 2.90E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene66960 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene053963 | MS.gene66960 | 0.814662 | 1.37E-51 | -1.69E-46 |
| MS.gene054222 | MS.gene66960 | 0.825262 | 5.16E-54 | -1.69E-46 |
| MS.gene05952 | MS.gene66960 | 0.818922 | 1.52E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene66960 | -0.808984 | 2.37E-50 | -1.69E-46 |
| MS.gene060840 | MS.gene66960 | 0.804197 | 2.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66960.t1 | MTR_6g033010 | 96.400 | 250 | 9 | 0 | 1 | 250 | 1 | 250 | 1.69e-178 | 490 |
| MS.gene66960.t1 | MTR_6g033010 | 96.482 | 199 | 7 | 0 | 1 | 199 | 1 | 199 | 1.25e-135 | 380 |
| MS.gene66960.t1 | MTR_6g033010 | 92.344 | 209 | 11 | 1 | 1 | 209 | 1 | 204 | 2.70e-134 | 378 |
| MS.gene66960.t1 | MTR_7g085070 | 68.699 | 246 | 75 | 1 | 1 | 246 | 2 | 245 | 1.73e-116 | 333 |
| MS.gene66960.t1 | MTR_4g049340 | 51.452 | 241 | 109 | 3 | 6 | 245 | 5 | 238 | 2.55e-73 | 223 |
| MS.gene66960.t1 | MTR_7g088310 | 31.746 | 252 | 133 | 8 | 9 | 245 | 10 | 237 | 1.58e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66960.t1 | AT5G18290 | 53.086 | 243 | 107 | 3 | 6 | 246 | 5 | 242 | 3.95e-79 | 238 |
| MS.gene66960.t1 | AT5G18290 | 53.086 | 243 | 107 | 3 | 6 | 246 | 5 | 242 | 3.95e-79 | 238 |
| MS.gene66960.t1 | AT3G04090 | 54.043 | 235 | 100 | 3 | 1 | 235 | 1 | 227 | 1.43e-78 | 237 |
| MS.gene66960.t1 | AT3G56950 | 30.833 | 240 | 152 | 4 | 11 | 249 | 10 | 236 | 2.32e-29 | 110 |
| MS.gene66960.t1 | AT3G56950 | 30.579 | 242 | 154 | 4 | 9 | 249 | 8 | 236 | 4.09e-29 | 110 |
Find 43 sgRNAs with CRISPR-Local
Find 294 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATCATGTGACTATATTT+TGG | 0.205285 | 6.4:+4233421 | None:intergenic |
| TTCTGATACTCTTGTCTCTA+TGG | 0.239383 | 6.4:-4234389 | MS.gene66960:CDS |
| TACTGCCATTGGTAATGCTT+TGG | 0.277983 | 6.4:-4234467 | MS.gene66960:CDS |
| GGCTGGTGCTAAGGCAATTA+AGG | 0.306023 | 6.4:-4233455 | MS.gene66960:CDS |
| TCTTTCTATGCTGCTGGTCT+TGG | 0.318211 | 6.4:-4234412 | MS.gene66960:CDS |
| TACTGGATTTGTCCATTCAT+TGG | 0.326816 | 6.4:-4230286 | MS.gene66960:CDS |
| AATGTTGTAATTATAATAAA+TGG | 0.340508 | 6.4:+4234517 | None:intergenic |
| CTTCAATTTGTGACATATAA+TGG | 0.348271 | 6.4:-4234550 | MS.gene66960:CDS |
| TTGAAGGTTGATTTGCATAC+TGG | 0.359493 | 6.4:-4233388 | MS.gene66960:CDS |
| GGCTATTCGTTTCCCTGCTC+AGG | 0.361454 | 6.4:-4234368 | MS.gene66960:intron |
| ACTGCCATTGGTAATGCTTT+GGG | 0.373544 | 6.4:-4234466 | MS.gene66960:CDS |
| AGTTATGTTACACAGGCATT+AGG | 0.415587 | 6.4:-4233484 | MS.gene66960:intron |
| GATTGGAGGACCTGCTTTGA+AGG | 0.430772 | 6.4:-4233404 | MS.gene66960:CDS |
| CCAAAATATAGTCACATGAT+TGG | 0.450400 | 6.4:-4233421 | MS.gene66960:CDS |
| GCAAGTATTGCTCCAATGAA+TGG | 0.454161 | 6.4:+4230274 | None:intergenic |
| AATGCTTCTTTCTATGCTGC+TGG | 0.462327 | 6.4:-4234418 | MS.gene66960:CDS |
| AATCCAACAAAAGCAGCAAT+AGG | 0.463363 | 6.4:-4234655 | MS.gene66960:CDS |
| GTTGGGCATACTTAGACAAC+TGG | 0.476439 | 6.4:-4230336 | MS.gene66960:CDS |
| ACTAGGATAGGATTCATTGA+TGG | 0.482882 | 6.4:+4233217 | None:intergenic |
| TTGGAGCAATACTTGCTGCT+TGG | 0.488680 | 6.4:-4230267 | MS.gene66960:CDS |
| GATAGGATTCATTGATGGTC+CGG | 0.492962 | 6.4:+4233222 | None:intergenic |
| AGAAAGAAGCATTTCCTGTA+GGG | 0.496577 | 6.4:+4234428 | None:intergenic |
| AGGTGCAGTGGCTGGTGCTA+AGG | 0.499134 | 6.4:-4233464 | MS.gene66960:CDS |
| AATGAATCACTTACTAGGAT+AGG | 0.501347 | 6.4:+4233205 | None:intergenic |
| ATGTTTATATCTTCAACACT+TGG | 0.520569 | 6.4:-4234607 | MS.gene66960:CDS |
| TAGACAACTGGCACCACACA+TGG | 0.532310 | 6.4:-4230324 | MS.gene66960:CDS |
| GGTGCAAGTTTCAACCCTAC+AGG | 0.540289 | 6.4:-4234442 | MS.gene66960:CDS |
| TGCAAATCAACCTTCAAAGC+AGG | 0.540861 | 6.4:+4233394 | None:intergenic |
| TAGAAAGAAGCATTTCCTGT+AGG | 0.555948 | 6.4:+4234427 | None:intergenic |
| AATCATAGCTACGGTCGACA+CGG | 0.578906 | 6.4:+4233264 | None:intergenic |
| CAGGCATTAGGTGCAGTGGC+TGG | 0.583997 | 6.4:-4233472 | MS.gene66960:CDS |
| CATACTGGAGCTATTGCAGA+AGG | 0.585895 | 6.4:-4233373 | MS.gene66960:CDS |
| GTTCTCTTCATCTTGCTCAG+AGG | 0.586421 | 6.4:-4233322 | MS.gene66960:CDS |
| AAATATAGTCACATGATTGG+AGG | 0.596252 | 6.4:-4233418 | MS.gene66960:CDS |
| GCCATTGGTAATGCTTTGGG+TGG | 0.600500 | 6.4:-4234463 | MS.gene66960:CDS |
| TACACAGGCATTAGGTGCAG+TGG | 0.609819 | 6.4:-4233476 | MS.gene66960:intron |
| ACCGATGAGAATCATAGCTA+CGG | 0.619659 | 6.4:+4233255 | None:intergenic |
| ACCGTAGCTATGATTCTCAT+CGG | 0.620550 | 6.4:-4233256 | MS.gene66960:CDS |
| CTCATCGGTTCTGCTTACAC+CGG | 0.636201 | 6.4:-4233241 | MS.gene66960:CDS |
| CATAAAATTGATCCCATGTG+TGG | 0.655239 | 6.4:+4230311 | None:intergenic |
| AGACAACTGGCACCACACAT+GGG | 0.677407 | 6.4:-4230323 | MS.gene66960:CDS |
| ACCACCCAAAGCATTACCAA+TGG | 0.682828 | 6.4:+4234462 | None:intergenic |
| GTCTTCATGAACTCACTACG+AGG | 0.738023 | 6.4:+4233298 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGTTGTAATTATAATAAA+TGG | + | chr6.4:4230348-4230367 | None:intergenic | 10.0% |
| !!! | GTCTTTTTATTTTTTATTTT+TGG | - | chr6.4:4230537-4230556 | MS.gene66960:intron | 10.0% |
| !!! | TATTTTTTATTTTTGGATTT+TGG | - | chr6.4:4230544-4230563 | MS.gene66960:intron | 10.0% |
| !! | AAAAGAATTACAAAAACAAA+TGG | + | chr6.4:4232925-4232944 | None:intergenic | 15.0% |
| !! | CTTATAGAAAATATATTACT+TGG | - | chr6.4:4231098-4231117 | MS.gene66960:intron | 15.0% |
| !!! | AGGTTTTTATTTATTTCAAA+AGG | - | chr6.4:4230514-4230533 | MS.gene66960:intron | 15.0% |
| !!! | ATTTTAGATGATTTATGTTA+AGG | - | chr6.4:4230573-4230592 | MS.gene66960:intron | 15.0% |
| !!! | CAAGTAATATATTTTCTATA+AGG | + | chr6.4:4231100-4231119 | None:intergenic | 15.0% |
| !!! | GGTTTTTATTTATTTCAAAA+GGG | - | chr6.4:4230515-4230534 | MS.gene66960:intron | 15.0% |
| !! | AAAAACGCAACAAAAATATA+TGG | + | chr6.4:4231815-4231834 | None:intergenic | 20.0% |
| !! | AAAAATTGTCAAAAGGATTA+AGG | + | chr6.4:4233835-4233854 | None:intergenic | 20.0% |
| !! | ACAAAATTGACAAAATAAAG+TGG | + | chr6.4:4234272-4234291 | None:intergenic | 20.0% |
| !! | ATTGAATCTAATTACTATGT+TGG | + | chr6.4:4233288-4233307 | None:intergenic | 20.0% |
| !! | CAATAAAAATTAATGTGAGT+AGG | + | chr6.4:4233557-4233576 | None:intergenic | 20.0% |
| !! | GAACTTATATTATCATCAAA+TGG | + | chr6.4:4233873-4233892 | None:intergenic | 20.0% |
| !!! | AATTGATTTGGCATATTTTT+AGG | + | chr6.4:4232654-4232673 | None:intergenic | 20.0% |
| !!! | ACTCTAATTTTGCTTTAATT+TGG | - | chr6.4:4233601-4233620 | MS.gene66960:intron | 20.0% |
| !!! | ATCAATAAAAATAATGGACA+TGG | + | chr6.4:4234378-4234397 | None:intergenic | 20.0% |
| !!! | ATGATAATATAAGTTCCTTT+TGG | - | chr6.4:4233877-4233896 | MS.gene66960:intron | 20.0% |
| !!! | ATTGATTTGGCATATTTTTA+GGG | + | chr6.4:4232653-4232672 | None:intergenic | 20.0% |
| !!! | GTCAAAATTATTACTTTTGT+CGG | - | chr6.4:4231028-4231047 | MS.gene66960:intron | 20.0% |
| !!! | TGATAATATAAGTTCCTTTT+GGG | - | chr6.4:4233878-4233897 | MS.gene66960:intron | 20.0% |
| ! | AAAATTAGAGTAGTTCATCT+AGG | + | chr6.4:4233592-4233611 | None:intergenic | 25.0% |
| ! | AAATAAATAAAAACCTGAGC+AGG | + | chr6.4:4230510-4230529 | None:intergenic | 25.0% |
| ! | AAGTATACCAATCATTAACA+TGG | + | chr6.4:4234486-4234505 | None:intergenic | 25.0% |
| ! | AATAAATAAAAACCTGAGCA+GGG | + | chr6.4:4230509-4230528 | None:intergenic | 25.0% |
| ! | AATTGACAAAATAAAGTGGT+CGG | + | chr6.4:4234268-4234287 | None:intergenic | 25.0% |
| ! | ACAAGCAAAAAATTGTCAAA+AGG | + | chr6.4:4233842-4233861 | None:intergenic | 25.0% |
| ! | ACCAATGATAACATGAAAAA+CGG | + | chr6.4:4231693-4231712 | None:intergenic | 25.0% |
| ! | ATAAAATGAGTGAGTAACAT+GGG | + | chr6.4:4232051-4232070 | None:intergenic | 25.0% |
| ! | ATCAATTTCTTTAACCTTGA+TGG | - | chr6.4:4232667-4232686 | MS.gene66960:intron | 25.0% |
| ! | ATCTATAAATTCCAACTTTG+TGG | + | chr6.4:4231907-4231926 | None:intergenic | 25.0% |
| ! | ATGTTTATATCTTCAACACT+TGG | - | chr6.4:4230255-4230274 | MS.gene66960:CDS | 25.0% |
| ! | ATTATTACTACTGTTGTATC+CGG | - | chr6.4:4230681-4230700 | MS.gene66960:intron | 25.0% |
| ! | ATTATTCATTGTAGTGAATC+GGG | + | chr6.4:4234052-4234071 | None:intergenic | 25.0% |
| ! | CAAGGTTAAAGAAATTGATT+TGG | + | chr6.4:4232666-4232685 | None:intergenic | 25.0% |
| ! | CAATGGTAATTTGGTTAAAA+CGG | + | chr6.4:4232376-4232395 | None:intergenic | 25.0% |
| ! | CGATTCACAATTCAAAAAAT+AGG | - | chr6.4:4234426-4234445 | MS.gene66960:CDS | 25.0% |
| ! | CTTCAATTTGTGACATATAA+TGG | - | chr6.4:4230312-4230331 | MS.gene66960:CDS | 25.0% |
| ! | GAAAAAATGAATCACTTACT+AGG | + | chr6.4:4231665-4231684 | None:intergenic | 25.0% |
| ! | GATTATTCATTGTAGTGAAT+CGG | + | chr6.4:4234053-4234072 | None:intergenic | 25.0% |
| ! | GATTTATGACTCGAATTATT+CGG | - | chr6.4:4234320-4234339 | MS.gene66960:intron | 25.0% |
| ! | TATAAAATGAGTGAGTAACA+TGG | + | chr6.4:4232052-4232071 | None:intergenic | 25.0% |
| ! | TATAACATTAAGTGCATGTT+TGG | + | chr6.4:4230854-4230873 | None:intergenic | 25.0% |
| ! | TCTATAAATTCCAACTTTGT+GGG | + | chr6.4:4231906-4231925 | None:intergenic | 25.0% |
| ! | TTTGGTTAAAACGGAATAAT+TGG | + | chr6.4:4232367-4232386 | None:intergenic | 25.0% |
| !! | CACTAACTTGTAAATATTGA+CGG | + | chr6.4:4233332-4233351 | None:intergenic | 25.0% |
| !! | GATAATATAAGTTCCTTTTG+GGG | - | chr6.4:4233879-4233898 | MS.gene66960:intron | 25.0% |
| !! | TGTAGTTTTTGTCAAAATCA+CGG | - | chr6.4:4230793-4230812 | MS.gene66960:intron | 25.0% |
| !! | TTGATAACCATGTTAATGAT+TGG | - | chr6.4:4234476-4234495 | MS.gene66960:CDS | 25.0% |
| !!! | ACTTAATGTTATAGCCTTAT+AGG | - | chr6.4:4230861-4230880 | MS.gene66960:intron | 25.0% |
| !!! | ATTTTGTGTTGACTTTTACA+TGG | - | chr6.4:4230232-4230251 | MS.gene66960:CDS | 25.0% |
| !!! | GGTATACTTTTTATTTTTGC+AGG | - | chr6.4:4234497-4234516 | MS.gene66960:CDS | 25.0% |
| !!! | TTTTTATTTTTGCAGGCATA+TGG | - | chr6.4:4234504-4234523 | MS.gene66960:CDS | 25.0% |
| AAATATAGTCACATGATTGG+AGG | - | chr6.4:4231444-4231463 | MS.gene66960:intron | 30.0% | |
| AATCCTCTTTCGTTATAGTT+TGG | - | chr6.4:4233005-4233024 | MS.gene66960:intron | 30.0% | |
| AATGAATCACTTACTAGGAT+AGG | + | chr6.4:4231660-4231679 | None:intergenic | 30.0% | |
| AATGACAAAAGAAAAGCTAC+TGG | + | chr6.4:4234123-4234142 | None:intergenic | 30.0% | |
| AATGACTAAAGAAAAGCTAC+TGG | + | chr6.4:4234299-4234318 | None:intergenic | 30.0% | |
| ACCAATGACATTCAATGAAA+TGG | + | chr6.4:4233678-4233697 | None:intergenic | 30.0% | |
| ACTTCAGATTGAAAACATGT+AGG | - | chr6.4:4233083-4233102 | MS.gene66960:intron | 30.0% | |
| ACTTGAATTATTCAGACGTT+AGG | - | chr6.4:4234152-4234171 | MS.gene66960:intron | 30.0% | |
| ATATGACAATTGTAGTTGCA+GGG | - | chr6.4:4231262-4231281 | MS.gene66960:intron | 30.0% | |
| ATGATTCATTGTAGTGAATC+GGG | + | chr6.4:4234229-4234248 | None:intergenic | 30.0% | |
| ATTAACGAGTTATGTTACAC+AGG | - | chr6.4:4231371-4231390 | MS.gene66960:intron | 30.0% | |
| CCAAAATATAGTCACATGAT+TGG | - | chr6.4:4231441-4231460 | MS.gene66960:intron | 30.0% | |
| CCAATGACATTCAATGAAAT+GGG | + | chr6.4:4233677-4233696 | None:intergenic | 30.0% | |
| CTATAAATTCCAACTTTGTG+GGG | + | chr6.4:4231905-4231924 | None:intergenic | 30.0% | |
| CTGATATATGCTGTATAACA+CGG | + | chr6.4:4233529-4233548 | None:intergenic | 30.0% | |
| CTTAAGTAGTAAGCTAACAA+TGG | + | chr6.4:4232393-4232412 | None:intergenic | 30.0% | |
| GATGATTCATTGTAGTGAAT+CGG | + | chr6.4:4234230-4234249 | None:intergenic | 30.0% | |
| GTAAGCTAACAATGGTAATT+TGG | + | chr6.4:4232385-4232404 | None:intergenic | 30.0% | |
| GTTTGGATTCACAATGAATT+TGG | + | chr6.4:4230837-4230856 | None:intergenic | 30.0% | |
| TATCTGTGTCAGTATGATAT+TGG | - | chr6.4:4233368-4233387 | MS.gene66960:CDS | 30.0% | |
| TCGTTAACAGTATATCACTT+TGG | + | chr6.4:4233451-4233470 | None:intergenic | 30.0% | |
| TGGCTTAGTGAAATTATGTT+GGG | - | chr6.4:4230906-4230925 | MS.gene66960:intron | 30.0% | |
| TTCATTGAATGTCATTGGTA+TGG | - | chr6.4:4233679-4233698 | MS.gene66960:intron | 30.0% | |
| ! | AAAACAGAAAAAGCGTAAAG+AGG | - | chr6.4:4234656-4234675 | MS.gene66960:CDS | 30.0% |
| ! | CCAATCATGTGACTATATTT+TGG | + | chr6.4:4231444-4231463 | None:intergenic | 30.0% |
| ! | GGGATCAATTTTATGTTTAC+TGG | - | chr6.4:4234559-4234578 | MS.gene66960:CDS | 30.0% |
| !! | ATCATGTGACTATATTTTGG+TGG | + | chr6.4:4231441-4231460 | None:intergenic | 30.0% |
| !! | ATCTTTACTTTTACTGCCAT+TGG | - | chr6.4:4230384-4230403 | MS.gene66960:intron | 30.0% |
| !! | ATGTTTTCAATCTGAAGTGT+TGG | + | chr6.4:4233081-4233100 | None:intergenic | 30.0% |
| !! | TAATTTTGACGTGTCTGTAT+CGG | + | chr6.4:4231018-4231037 | None:intergenic | 30.0% |
| !! | TTTGGCTATGATTAGTTTCA+CGG | - | chr6.4:4233619-4233638 | MS.gene66960:intron | 30.0% |
| !!! | TGTTTTTTTACCACTTGTTG+TGG | + | chr6.4:4234642-4234661 | None:intergenic | 30.0% |
| AAGTGAGAGTCTCAAACTTT+AGG | + | chr6.4:4231782-4231801 | None:intergenic | 35.0% | |
| AATAAACTTCCCCACAAAGT+TGG | - | chr6.4:4231893-4231912 | MS.gene66960:intron | 35.0% | |
| AATCATGCCAGAGTAAACTA+CGG | + | chr6.4:4232880-4232899 | None:intergenic | 35.0% | |
| AATCCAACAAAAGCAGCAAT+AGG | - | chr6.4:4230207-4230226 | MS.gene66960:CDS | 35.0% | |
| ACCGTCATAGCAGATTATAA+CGG | + | chr6.4:4233204-4233223 | None:intergenic | 35.0% | |
| ACTAGGATAGGATTCATTGA+TGG | + | chr6.4:4231648-4231667 | None:intergenic | 35.0% | |
| AGTCCTCACTCCAAATAAAA+TGG | - | chr6.4:4232780-4232799 | MS.gene66960:intron | 35.0% | |
| AGTTATGTTACACAGGCATT+AGG | - | chr6.4:4231378-4231397 | MS.gene66960:intron | 35.0% | |
| ATATTAGCGAGTTCGTACTT+CGG | + | chr6.4:4231960-4231979 | None:intergenic | 35.0% | |
| ATCTGTAAATGACAGTAGTC+TGG | + | chr6.4:4232463-4232482 | None:intergenic | 35.0% | |
| ATGTCCATCAGAATCTGTTT+AGG | - | chr6.4:4232434-4232453 | MS.gene66960:intron | 35.0% | |
| ATTCCTCGTATATCTATGCA+CGG | + | chr6.4:4233909-4233928 | None:intergenic | 35.0% | |
| ATTGACAGAAACATCGTGAT+AGG | + | chr6.4:4234091-4234110 | None:intergenic | 35.0% | |
| CACACACTGTTATCGAATAT+CGG | - | chr6.4:4233116-4233135 | MS.gene66960:intron | 35.0% | |
| CATAAAATTGATCCCATGTG+TGG | + | chr6.4:4234554-4234573 | None:intergenic | 35.0% | |
| CATAGATATACGAGGAATCA+TGG | - | chr6.4:4233911-4233930 | MS.gene66960:intron | 35.0% | |
| CATATGACAATTGTAGTTGC+AGG | - | chr6.4:4231261-4231280 | MS.gene66960:intron | 35.0% | |
| CCCATTTCATTGAATGTCAT+TGG | - | chr6.4:4233674-4233693 | MS.gene66960:intron | 35.0% | |
| CGTGTTATACAGCATATATC+AGG | - | chr6.4:4233527-4233546 | MS.gene66960:intron | 35.0% | |
| CTGCAACTACAATTGTCATA+TGG | + | chr6.4:4231263-4231282 | None:intergenic | 35.0% | |
| CTGGCTTAGTGAAATTATGT+TGG | - | chr6.4:4230905-4230924 | MS.gene66960:intron | 35.0% | |
| CTTTGTCCAAAGAACATCAT+CGG | - | chr6.4:4232226-4232245 | MS.gene66960:intron | 35.0% | |
| GATTGGAGTCTCATTCTAAT+TGG | - | chr6.4:4232619-4232638 | MS.gene66960:intron | 35.0% | |
| GCACATACACTTATGATTGA+AGG | - | chr6.4:4230980-4230999 | MS.gene66960:intron | 35.0% | |
| GGTATGAAGTTTGTAGATGT+AGG | + | chr6.4:4233656-4233675 | None:intergenic | 35.0% | |
| GGTTTGACAACATACCTATA+AGG | + | chr6.4:4230878-4230897 | None:intergenic | 35.0% | |
| GTGAAATGCAATGTTGATGT+AGG | + | chr6.4:4232191-4232210 | None:intergenic | 35.0% | |
| TAAAACGGAATAATTGGACG+TGG | + | chr6.4:4232361-4232380 | None:intergenic | 35.0% | |
| TAATATGACAATAAGACCCG+TGG | - | chr6.4:4231974-4231993 | MS.gene66960:intron | 35.0% | |
| TACTGGATTTGTCCATTCAT+TGG | - | chr6.4:4234576-4234595 | MS.gene66960:CDS | 35.0% | |
| TATTCAACGACAAGCAAGTA+TGG | + | chr6.4:4231877-4231896 | None:intergenic | 35.0% | |
| TCATAGTGCCAATGTAGTAA+GGG | + | chr6.4:4232258-4232277 | None:intergenic | 35.0% | |
| TGAGACTCCAATCAAAAGAA+TGG | + | chr6.4:4232612-4232631 | None:intergenic | 35.0% | |
| TGTTAAGGTGAGTTTCGTAT+CGG | - | chr6.4:4230588-4230607 | MS.gene66960:intron | 35.0% | |
| TTAGTCATTCCACAAATTCC+AGG | + | chr6.4:4232825-4232844 | None:intergenic | 35.0% | |
| TTCGATGAAATAACGTGACA+CGG | - | chr6.4:4230743-4230762 | MS.gene66960:intron | 35.0% | |
| TTCTGATACTCTTGTCTCTA+TGG | - | chr6.4:4230473-4230492 | MS.gene66960:intron | 35.0% | |
| ! | ATTTTTGCAGGCATATGGTT+GGG | - | chr6.4:4234509-4234528 | MS.gene66960:CDS | 35.0% |
| ! | CTTGATGACTGCAAAATTTC+AGG | + | chr6.4:4231219-4231238 | None:intergenic | 35.0% |
| ! | GCAAAATTTCAGGTCAACAT+AGG | + | chr6.4:4231209-4231228 | None:intergenic | 35.0% |
| ! | GGAAAATTAAAGCACCATCA+AGG | + | chr6.4:4232684-4232703 | None:intergenic | 35.0% |
| ! | TGTTGGAGGACCATTTTATT+TGG | + | chr6.4:4232793-4232812 | None:intergenic | 35.0% |
| !! | AGAAAGAAGCATTTCCTGTA+GGG | + | chr6.4:4230437-4230456 | None:intergenic | 35.0% |
| !! | TAGAAAGAAGCATTTCCTGT+AGG | + | chr6.4:4230438-4230457 | None:intergenic | 35.0% |
| !! | TATTTTTGCAGGCATATGGT+TGG | - | chr6.4:4234508-4234527 | MS.gene66960:CDS | 35.0% |
| !! | TTGAAGGTTGATTTGCATAC+TGG | - | chr6.4:4231474-4231493 | MS.gene66960:intron | 35.0% |
| !!! | GCCGTTTTTCATGTTATCAT+TGG | - | chr6.4:4231689-4231708 | MS.gene66960:intron | 35.0% |
| !!! | TTTTTTACCACTTGTTGTGG+CGG | + | chr6.4:4234639-4234658 | None:intergenic | 35.0% |
| AAGAAGTAAGCTGCAATGCA+TGG | + | chr6.4:4233791-4233810 | None:intergenic | 40.0% | |
| AATGCTTCTTTCTATGCTGC+TGG | - | chr6.4:4230444-4230463 | MS.gene66960:intron | 40.0% | |
| ACCGATGAGAATCATAGCTA+CGG | + | chr6.4:4231610-4231629 | None:intergenic | 40.0% | |
| ACCGTAGCTATGATTCTCAT+CGG | - | chr6.4:4231606-4231625 | MS.gene66960:intron | 40.0% | |
| ATACGAGGAATCATGGTTAG+CGG | - | chr6.4:4233918-4233937 | MS.gene66960:intron | 40.0% | |
| ATATCACTGATGCTATCCAC+GGG | + | chr6.4:4231993-4232012 | None:intergenic | 40.0% | |
| ATCGGCTGATACTTACCATT+GGG | + | chr6.4:4233168-4233187 | None:intergenic | 40.0% | |
| ATGGTAAGTATCAGCCGATA+TGG | - | chr6.4:4233169-4233188 | MS.gene66960:intron | 40.0% | |
| ATTTCACTAAGCCAGCCTAT+TGG | + | chr6.4:4230900-4230919 | None:intergenic | 40.0% | |
| CACAGTTAAATCCAGATGCA+AGG | + | chr6.4:4232747-4232766 | None:intergenic | 40.0% | |
| CATATCACTGATGCTATCCA+CGG | + | chr6.4:4231994-4232013 | None:intergenic | 40.0% | |
| CCAGTATACTGAAACACATG+AGG | + | chr6.4:4231718-4231737 | None:intergenic | 40.0% | |
| CCCGTTATAATCTGCTATGA+CGG | - | chr6.4:4233200-4233219 | MS.gene66960:intron | 40.0% | |
| CCGTCATAGCAGATTATAAC+GGG | + | chr6.4:4233203-4233222 | None:intergenic | 40.0% | |
| CCTCATGTGTTTCAGTATAC+TGG | - | chr6.4:4231715-4231734 | MS.gene66960:intron | 40.0% | |
| CGTGATAGGCTACACTAAAT+AGG | + | chr6.4:4234077-4234096 | None:intergenic | 40.0% | |
| CTACGGTTCAAGATTGTAGA+TGG | + | chr6.4:4232863-4232882 | None:intergenic | 40.0% | |
| CTCATAGTGCCAATGTAGTA+AGG | + | chr6.4:4232259-4232278 | None:intergenic | 40.0% | |
| CTGTTACCGATGATGTTCTT+TGG | + | chr6.4:4232235-4232254 | None:intergenic | 40.0% | |
| CTTACTACATTGGCACTATG+AGG | - | chr6.4:4232257-4232276 | MS.gene66960:intron | 40.0% | |
| GAGCCAAACTATAACGAAAG+AGG | + | chr6.4:4233011-4233030 | None:intergenic | 40.0% | |
| GAGGATACACGTAGATTTCA+TGG | - | chr6.4:4231174-4231193 | MS.gene66960:intron | 40.0% | |
| GAGGATTTGCATAGATGTAG+AGG | + | chr6.4:4232992-4233011 | None:intergenic | 40.0% | |
| GGAGTCTCATTCTAATTGGT+AGG | - | chr6.4:4232623-4232642 | MS.gene66960:intron | 40.0% | |
| GGTATGTTGTCAAACCCAAT+AGG | - | chr6.4:4230882-4230901 | MS.gene66960:intron | 40.0% | |
| GTCTCCTAAACAGATTCTGA+TGG | + | chr6.4:4232441-4232460 | None:intergenic | 40.0% | |
| GTTTGTACACAATGTGGTTC+CGG | + | chr6.4:4232725-4232744 | None:intergenic | 40.0% | |
| TAAGTATCAGCCGATATGGT+GGG | - | chr6.4:4233173-4233192 | MS.gene66960:intron | 40.0% | |
| TATGTGTTTGCATCTGACAC+CGG | - | chr6.4:4230612-4230631 | MS.gene66960:intron | 40.0% | |
| TCAGTATGATATTGGTACGC+TGG | - | chr6.4:4233376-4233395 | MS.gene66960:CDS | 40.0% | |
| TCATATCCTTCTTGCTCTCT+CGG | - | chr6.4:4231128-4231147 | MS.gene66960:intron | 40.0% | |
| TCTTGAACCGTAGTTTACTC+TGG | - | chr6.4:4232870-4232889 | MS.gene66960:intron | 40.0% | |
| TGCAAATCAACCTTCAAAGC+AGG | + | chr6.4:4231471-4231490 | None:intergenic | 40.0% | |
| TGCAAGGTTTGTACACAATG+TGG | + | chr6.4:4232731-4232750 | None:intergenic | 40.0% | |
| TGTAGATGGAAGATTGACGA+TGG | + | chr6.4:4232849-4232868 | None:intergenic | 40.0% | |
| TTGATGTAGGAGTTCATAGC+AGG | + | chr6.4:4232178-4232197 | None:intergenic | 40.0% | |
| TTGCACATAGAACAGTGTAG+AGG | - | chr6.4:4232581-4232600 | MS.gene66960:intron | 40.0% | |
| TTGTGTACAAACCTTGCATC+TGG | - | chr6.4:4232733-4232752 | MS.gene66960:intron | 40.0% | |
| TTTCACTAAGCCAGCCTATT+GGG | + | chr6.4:4230899-4230918 | None:intergenic | 40.0% | |
| TTTGGACAAAGCCTTCTCAA+GGG | + | chr6.4:4232217-4232236 | None:intergenic | 40.0% | |
| TTTGTACACAATGTGGTTCC+GGG | + | chr6.4:4232724-4232743 | None:intergenic | 40.0% | |
| ! | ATTTGGAGTGAGGACTATTG+CGG | + | chr6.4:4232776-4232795 | None:intergenic | 40.0% |
| ! | CTTATGATTGAAGGCGTGTT+CGG | - | chr6.4:4230989-4231008 | MS.gene66960:intron | 40.0% |
| ! | GATAGGATTCATTGATGGTC+CGG | + | chr6.4:4231643-4231662 | None:intergenic | 40.0% |
| ! | GCAAGTATTGCTCCAATGAA+TGG | + | chr6.4:4234591-4234610 | None:intergenic | 40.0% |
| ! | GGACAGACCATTCTTTTGAT+TGG | - | chr6.4:4232602-4232621 | MS.gene66960:intron | 40.0% |
| ! | TATCGGCTGATACTTACCAT+TGG | + | chr6.4:4233169-4233188 | None:intergenic | 40.0% |
| ! | TCATAGCAGGCTCGATTTTA+GGG | + | chr6.4:4232165-4232184 | None:intergenic | 40.0% |
| ! | TCATGTTTTGTCAGCAGTGT+TGG | + | chr6.4:4233263-4233282 | None:intergenic | 40.0% |
| ! | TGCAGATTGGTTGTAAGCTA+AGG | + | chr6.4:4232285-4232304 | None:intergenic | 40.0% |
| ! | TTCATAGCAGGCTCGATTTT+AGG | + | chr6.4:4232166-4232185 | None:intergenic | 40.0% |
| ! | TTTTTCCTTGTGCACGATAG+AGG | + | chr6.4:4233425-4233444 | None:intergenic | 40.0% |
| !! | ACTGCCATTGGTAATGCTTT+GGG | - | chr6.4:4230396-4230415 | MS.gene66960:intron | 40.0% |
| !! | ATTACTTTTGTCGGCATGTC+TGG | - | chr6.4:4231037-4231056 | MS.gene66960:intron | 40.0% |
| !! | CTCGATTTTAGGGATCATGA+AGG | + | chr6.4:4232155-4232174 | None:intergenic | 40.0% |
| !! | GCTTAACTTGTGACTTGTGT+TGG | - | chr6.4:4231284-4231303 | MS.gene66960:intron | 40.0% |
| !! | GGACCATTTTATTTGGAGTG+AGG | + | chr6.4:4232786-4232805 | None:intergenic | 40.0% |
| !! | TACTGCCATTGGTAATGCTT+TGG | - | chr6.4:4230395-4230414 | MS.gene66960:intron | 40.0% |
| !!! | TCTCCTATTGCTGCTTTTGT+TGG | + | chr6.4:4230213-4230232 | None:intergenic | 40.0% |
| !!! | TTTTTACCACTTGTTGTGGC+GGG | + | chr6.4:4234638-4234657 | None:intergenic | 40.0% |
| AAAATGGTCCTCCAACACAG+AGG | - | chr6.4:4232796-4232815 | MS.gene66960:intron | 45.0% | |
| AAATGGTCCTCCAACACAGA+GGG | - | chr6.4:4232797-4232816 | MS.gene66960:intron | 45.0% | |
| AACGGGAAAACCCACCATAT+CGG | + | chr6.4:4233186-4233205 | None:intergenic | 45.0% | |
| AACTGACACGACATAGACAC+CGG | + | chr6.4:4230703-4230722 | None:intergenic | 45.0% | |
| AATCATAGCTACGGTCGACA+CGG | + | chr6.4:4231601-4231620 | None:intergenic | 45.0% | |
| AATCTCGATCTGGATTGCAG+AGG | - | chr6.4:4231155-4231174 | MS.gene66960:intron | 45.0% | |
| ACAGATAATCCCCAGCAAAC+TGG | - | chr6.4:4232477-4232496 | MS.gene66960:intron | 45.0% | |
| CATACTGGAGCTATTGCAGA+AGG | - | chr6.4:4231489-4231508 | MS.gene66960:intron | 45.0% | |
| CTGCAATCCAGATCGAGATT+GGG | + | chr6.4:4231155-4231174 | None:intergenic | 45.0% | |
| CTGTACATGGAAAGAGCTCA+TGG | - | chr6.4:4232538-4232557 | MS.gene66960:intron | 45.0% | |
| CTTTGGACAAAGCCTTCTCA+AGG | + | chr6.4:4232218-4232237 | None:intergenic | 45.0% | |
| GAATAATTGGACGTGGAACC+AGG | + | chr6.4:4232354-4232373 | None:intergenic | 45.0% | |
| GCGGTTATGCAGGTAAAAGA+GGG | + | chr6.4:4232099-4232118 | None:intergenic | 45.0% | |
| GGTAACAGCCCTTACTACAT+TGG | - | chr6.4:4232247-4232266 | MS.gene66960:intron | 45.0% | |
| GTAAGTATCAGCCGATATGG+TGG | - | chr6.4:4233172-4233191 | MS.gene66960:intron | 45.0% | |
| GTACCGTGCATAGATATACG+AGG | - | chr6.4:4233903-4233922 | MS.gene66960:intron | 45.0% | |
| GTATGATATTGGTACGCTGG+TGG | - | chr6.4:4233379-4233398 | MS.gene66960:CDS | 45.0% | |
| GTCTTCATGAACTCACTACG+AGG | + | chr6.4:4231567-4231586 | None:intergenic | 45.0% | |
| GTTCTCTTCATCTTGCTCAG+AGG | - | chr6.4:4231540-4231559 | MS.gene66960:intron | 45.0% | |
| GTTGGGCATACTTAGACAAC+TGG | - | chr6.4:4234526-4234545 | MS.gene66960:CDS | 45.0% | |
| TATGCAGGTAAAAGAGGGTG+AGG | + | chr6.4:4232094-4232113 | None:intergenic | 45.0% | |
| TCGGCTGATACTTACCATTG+GGG | + | chr6.4:4233167-4233186 | None:intergenic | 45.0% | |
| TCTGCAATCCAGATCGAGAT+TGG | + | chr6.4:4231156-4231175 | None:intergenic | 45.0% | |
| TGCGGTTATGCAGGTAAAAG+AGG | + | chr6.4:4232100-4232119 | None:intergenic | 45.0% | |
| TGGTTACTGGTCACTGTACA+TGG | - | chr6.4:4232525-4232544 | MS.gene66960:intron | 45.0% | |
| TGTTGTCAAACCCAATAGGC+TGG | - | chr6.4:4230886-4230905 | MS.gene66960:intron | 45.0% | |
| ! | ACCACCCAAAGCATTACCAA+TGG | + | chr6.4:4230403-4230422 | None:intergenic | 45.0% |
| ! | AGTGTTGGAGAGCCAAAATC+CGG | + | chr6.4:4233248-4233267 | None:intergenic | 45.0% |
| ! | GTGTTGCTACAAGTTTCTCC+TGG | - | chr6.4:4232333-4232352 | MS.gene66960:intron | 45.0% |
| ! | TCTTTCTATGCTGCTGGTCT+TGG | - | chr6.4:4230450-4230469 | MS.gene66960:intron | 45.0% |
| ! | TTGCATAGATGTAGAGGTGC+TGG | + | chr6.4:4232986-4233005 | None:intergenic | 45.0% |
| ! | TTGGAGCAATACTTGCTGCT+TGG | - | chr6.4:4234595-4234614 | MS.gene66960:CDS | 45.0% |
| !! | AGGTGCTGGCACATTAATGT+TGG | + | chr6.4:4232972-4232991 | None:intergenic | 45.0% |
| !! | TATATTATCAATAAAAATAA+TGG | + | chr6.4:4234384-4234403 | None:intergenic | 5.0% |
| AGACAACTGGCACCACACAT+GGG | - | chr6.4:4234539-4234558 | MS.gene66960:CDS | 50.0% | |
| AGTGGTCGGCTACACTAAAG+AGG | + | chr6.4:4234254-4234273 | None:intergenic | 50.0% | |
| CACATGTATCAGTGTCGTGC+CGG | + | chr6.4:4230634-4230653 | None:intergenic | 50.0% | |
| CAGATAGAGTTCCACTCTCC+CGG | - | chr6.4:4232703-4232722 | MS.gene66960:intron | 50.0% | |
| CATTTCACCCACCCTTGAGA+AGG | - | chr6.4:4232203-4232222 | MS.gene66960:intron | 50.0% | |
| CCAGTAACCAGTGAGTAAGC+AGG | + | chr6.4:4232515-4232534 | None:intergenic | 50.0% | |
| CTATGTGCAACGATGAGACG+TGG | + | chr6.4:4232571-4232590 | None:intergenic | 50.0% | |
| GACAAAGCCTTCTCAAGGGT+GGG | + | chr6.4:4232213-4232232 | None:intergenic | 50.0% | |
| GATTGGAGGACCTGCTTTGA+AGG | - | chr6.4:4231458-4231477 | MS.gene66960:intron | 50.0% | |
| GGTGCAAGTTTCAACCCTAC+AGG | - | chr6.4:4230420-4230439 | MS.gene66960:intron | 50.0% | |
| GGTTGCTCATACTCGTGTGA+GGG | + | chr6.4:4231856-4231875 | None:intergenic | 50.0% | |
| TACACAGGCATTAGGTGCAG+TGG | - | chr6.4:4231386-4231405 | MS.gene66960:intron | 50.0% | |
| TAGACAACTGGCACCACACA+TGG | - | chr6.4:4234538-4234557 | MS.gene66960:CDS | 50.0% | |
| TATGCACGGTACACCCCAAA+AGG | + | chr6.4:4233895-4233914 | None:intergenic | 50.0% | |
| TGGTTGCTCATACTCGTGTG+AGG | + | chr6.4:4231857-4231876 | None:intergenic | 50.0% | |
| TGTGAGGGAGGTCATTGCTT+TGG | + | chr6.4:4231841-4231860 | None:intergenic | 50.0% | |
| TGTTATCGAATATCGGCGCC+CGG | - | chr6.4:4233123-4233142 | MS.gene66960:intron | 50.0% | |
| TTCCTCCTCTATCGTGCACA+AGG | - | chr6.4:4233417-4233436 | MS.gene66960:CDS | 50.0% | |
| TTCCTTGTGCACGATAGAGG+AGG | + | chr6.4:4233422-4233441 | None:intergenic | 50.0% | |
| ! | CCTGCTTACTCACTGGTTAC+TGG | - | chr6.4:4232512-4232531 | MS.gene66960:intron | 50.0% |
| ! | GGCTGGTGCTAAGGCAATTA+AGG | - | chr6.4:4231407-4231426 | MS.gene66960:intron | 50.0% |
| ! | TGTTTTCCCGCCACAACAAG+TGG | - | chr6.4:4234629-4234648 | MS.gene66960:CDS | 50.0% |
| !! | CTCATCGGTTCTGCTTACAC+CGG | - | chr6.4:4231621-4231640 | MS.gene66960:intron | 50.0% |
| !! | GCCATTGGTAATGCTTTGGG+TGG | - | chr6.4:4230399-4230418 | MS.gene66960:intron | 50.0% |
| ACAATGTGGTTCCGGGAGAG+TGG | + | chr6.4:4232717-4232736 | None:intergenic | 55.0% | |
| ACTCGCACCTGCTTACTCAC+TGG | - | chr6.4:4232505-4232524 | MS.gene66960:intron | 55.0% | |
| AGTGAGTAAGCAGGTGCGAG+TGG | + | chr6.4:4232506-4232525 | None:intergenic | 55.0% | |
| ATTCCAGGTGCCCTCTGTGT+TGG | + | chr6.4:4232810-4232829 | None:intergenic | 55.0% | |
| CGGGAGAGTGGAACTCTATC+TGG | + | chr6.4:4232705-4232724 | None:intergenic | 55.0% | |
| CTGCATAACCGCATCTGTCC+AGG | - | chr6.4:4232107-4232126 | MS.gene66960:intron | 55.0% | |
| CTGGACAGATGCGGTTATGC+AGG | + | chr6.4:4232109-4232128 | None:intergenic | 55.0% | |
| CTTCGCATCCTGGACAGATG+CGG | + | chr6.4:4232118-4232137 | None:intergenic | 55.0% | |
| GAGCCAAAATCCGGCCATAC+CGG | + | chr6.4:4233239-4233258 | None:intergenic | 55.0% | |
| GGACAAAGCCTTCTCAAGGG+TGG | + | chr6.4:4232214-4232233 | None:intergenic | 55.0% | |
| GGCTATTCGTTTCCCTGCTC+AGG | - | chr6.4:4230494-4230513 | MS.gene66960:intron | 55.0% | |
| GGTAAAAGAGGGTGAGGCAG+TGG | + | chr6.4:4232088-4232107 | None:intergenic | 55.0% | |
| GTGCACGATAGAGGAGGAAG+TGG | + | chr6.4:4233416-4233435 | None:intergenic | 55.0% | |
| TCTCGGTCCCAATCTCGATC+TGG | - | chr6.4:4231145-4231164 | MS.gene66960:intron | 55.0% | |
| TGCTCATACTCGTGTGAGGG+AGG | + | chr6.4:4231853-4231872 | None:intergenic | 55.0% | |
| TTGGGACCGAGAGAGCAAGA+AGG | + | chr6.4:4231137-4231156 | None:intergenic | 55.0% | |
| TTGTTGCAGCCTTCGCATCC+TGG | + | chr6.4:4232128-4232147 | None:intergenic | 55.0% | |
| !! | CAGAGGGCACCTGGAATTTG+TGG | - | chr6.4:4232813-4232832 | MS.gene66960:intron | 55.0% |
| !! | GCTATGACGGTGCCACAAAG+CGG | - | chr6.4:4233213-4233232 | MS.gene66960:intron | 55.0% |
| !! | GGTTTTTGGACTCGCCCCAA+TGG | - | chr6.4:4233150-4233169 | MS.gene66960:intron | 55.0% |
| CAACCAATCTGCACGCAGCG+AGG | - | chr6.4:4232292-4232311 | MS.gene66960:intron | 60.0% | |
| CAGGCATTAGGTGCAGTGGC+TGG | - | chr6.4:4231390-4231409 | MS.gene66960:intron | 60.0% | |
| CGAGTCCAAAAACCGCCACC+GGG | + | chr6.4:4233144-4233163 | None:intergenic | 60.0% | |
| CGCATCTGTCCAGGATGCGA+AGG | - | chr6.4:4232116-4232135 | MS.gene66960:intron | 60.0% | |
| GAGTAAGCAGGTGCGAGTGG+CGG | + | chr6.4:4232503-4232522 | None:intergenic | 60.0% | |
| GCGAGTCCAAAAACCGCCAC+CGG | + | chr6.4:4233145-4233164 | None:intergenic | 60.0% | |
| GGTGAGGCAGTGGCACTACT+CGG | + | chr6.4:4232078-4232097 | None:intergenic | 60.0% | |
| TATCGAATATCGGCGCCCGG+TGG | - | chr6.4:4233126-4233145 | MS.gene66960:intron | 60.0% | |
| ! | AGGTGCAGTGGCTGGTGCTA+AGG | - | chr6.4:4231398-4231417 | MS.gene66960:intron | 60.0% |
| CACAAAGCGGCCGGTATGGC+CGG | - | chr6.4:4233226-4233245 | MS.gene66960:CDS | 65.0% | |
| CCAGGTGCCCTCTGTGTTGG+AGG | + | chr6.4:4232807-4232826 | None:intergenic | 65.0% | |
| CTGCCTCGCTGCGTGCAGAT+TGG | + | chr6.4:4232298-4232317 | None:intergenic | 65.0% | |
| GTGCCACAAAGCGGCCGGTA+TGG | - | chr6.4:4233222-4233241 | MS.gene66960:CDS | 65.0% | |
| ! | CGAGTGGCGGCCAGTTTGCT+GGG | + | chr6.4:4232490-4232509 | None:intergenic | 65.0% |
| ! | CGGCCGGTATGGCCGGATTT+TGG | - | chr6.4:4233233-4233252 | MS.gene66960:CDS | 65.0% |
| !! | CCTCCAACACAGAGGGCACC+TGG | - | chr6.4:4232804-4232823 | MS.gene66960:intron | 65.0% |
| !! | GAGTGGCGGCCAGTTTGCTG+GGG | + | chr6.4:4232489-4232508 | None:intergenic | 65.0% |
| !! | TGACGGTGCCACAAAGCGGC+CGG | - | chr6.4:4233217-4233236 | MS.gene66960:intron | 65.0% |
| CGAATATCGGCGCCCGGTGG+CGG | - | chr6.4:4233129-4233148 | MS.gene66960:intron | 70.0% | |
| GCGAGTGGCGGCCAGTTTGC+TGG | + | chr6.4:4232491-4232510 | None:intergenic | 70.0% | |
| ! | CGGCCATACCGGCCGCTTTG+TGG | + | chr6.4:4233228-4233247 | None:intergenic | 70.0% |
| !! | CGGCGCCCGGTGGCGGTTTT+TGG | - | chr6.4:4233136-4233155 | MS.gene66960:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.4 | gene | 4230201 | 4234683 | 4230201 | ID=MS.gene66960 |
| chr6.4 | mRNA | 4230201 | 4234683 | 4230201 | ID=MS.gene66960.t1;Parent=MS.gene66960 |
| chr6.4 | exon | 4234369 | 4234683 | 4234369 | ID=MS.gene66960.t1.exon1;Parent=MS.gene66960.t1 |
| chr6.4 | CDS | 4234369 | 4234683 | 4234369 | ID=cds.MS.gene66960.t1;Parent=MS.gene66960.t1 |
| chr6.4 | exon | 4233219 | 4233491 | 4233219 | ID=MS.gene66960.t1.exon2;Parent=MS.gene66960.t1 |
| chr6.4 | CDS | 4233219 | 4233491 | 4233219 | ID=cds.MS.gene66960.t1;Parent=MS.gene66960.t1 |
| chr6.4 | exon | 4230201 | 4230365 | 4230201 | ID=MS.gene66960.t1.exon3;Parent=MS.gene66960.t1 |
| chr6.4 | CDS | 4230201 | 4230365 | 4230201 | ID=cds.MS.gene66960.t1;Parent=MS.gene66960.t1 |
| Gene Sequence |
| Protein sequence |
