Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053575.t1 | XP_003608387.1 | 97.6 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 7.00E-238 | 832.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053575.t1 | Q8H183 | 80.6 | 408 | 73 | 1 | 4 | 411 | 6 | 407 | 1.3e-200 | 700.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053575.t1 | G7JV36 | 97.6 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 5.0e-238 | 832.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene053575 | 0.80304 | 4.21E-49 | -1.69E-46 |
| MS.gene049424 | MS.gene053575 | 0.842175 | 3.04E-58 | -1.69E-46 |
| MS.gene049983 | MS.gene053575 | 0.812915 | 3.33E-51 | -1.69E-46 |
| MS.gene050359 | MS.gene053575 | 0.801503 | 8.73E-49 | -1.69E-46 |
| MS.gene050384 | MS.gene053575 | 0.822253 | 2.62E-53 | -1.69E-46 |
| MS.gene050386 | MS.gene053575 | 0.812415 | 4.29E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene053575 | 0.80737 | 5.23E-50 | -1.69E-46 |
| MS.gene050561 | MS.gene053575 | 0.801656 | 8.12E-49 | -1.69E-46 |
| MS.gene050562 | MS.gene053575 | 0.800903 | 1.16E-48 | -1.69E-46 |
| MS.gene052239 | MS.gene053575 | -0.803697 | 3.08E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene053575 | 0.801172 | 1.02E-48 | -1.69E-46 |
| MS.gene053079 | MS.gene053575 | 0.808495 | 3.01E-50 | -1.69E-46 |
| MS.gene053188 | MS.gene053575 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene056677 | 0.804583 | 2.02E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene05686 | 0.801778 | 7.67E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene058008 | 0.831815 | 1.35E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene058009 | 0.835705 | 1.44E-56 | -1.69E-46 |
| MS.gene053575 | MS.gene058010 | 0.81482 | 1.27E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene058054 | 0.817262 | 3.61E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene05952 | 0.817969 | 2.50E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene060840 | 0.85428 | 1.37E-61 | -1.69E-46 |
| MS.gene053575 | MS.gene060935 | 0.809483 | 1.85E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene060937 | 0.808894 | 2.47E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene062501 | 0.838575 | 2.65E-57 | -1.69E-46 |
| MS.gene053575 | MS.gene062770 | 0.800709 | 1.27E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene063752 | 0.813578 | 2.38E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene063753 | 0.821278 | 4.40E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene06441 | 0.805919 | 1.06E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene064969 | 0.807661 | 4.53E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene066897 | 0.831094 | 2.03E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene067308 | 0.807229 | 5.60E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene068028 | 0.953248 | 4.17E-111 | -1.69E-46 |
| MS.gene053575 | MS.gene06836 | 0.814949 | 1.19E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene071513 | 0.80341 | 3.53E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene072873 | 0.804944 | 1.69E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene073428 | 0.815137 | 1.08E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene07450 | 0.801116 | 1.05E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene07878 | 0.817692 | 2.89E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene08319 | 0.82108 | 4.88E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene22302 | 0.819274 | 1.27E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene27997 | 0.816694 | 4.85E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene28291 | 0.810629 | 1.05E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene29047 | 0.803932 | 2.75E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene29274 | 0.815613 | 8.45E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene29631 | 0.807201 | 5.67E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene32688 | 0.8229 | 1.85E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene34232 | 0.812318 | 4.50E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene34508 | 0.806464 | 8.12E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene34947 | 0.800473 | 1.42E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene36081 | 0.821111 | 4.80E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene38368 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene39037 | 0.822738 | 2.02E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene39190 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene40093 | 0.809554 | 1.79E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene40366 | 0.809064 | 2.28E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene42653 | 0.822187 | 2.71E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene42783 | 0.833014 | 6.80E-56 | -1.69E-46 |
| MS.gene053575 | MS.gene43430 | 0.815097 | 1.10E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene43969 | 0.803271 | 3.78E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene43972 | 0.818482 | 1.92E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene44058 | 0.813443 | 2.55E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene45334 | 0.816227 | 6.16E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene45732 | 0.804972 | 1.67E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene46442 | 0.803103 | 4.09E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene47674 | 0.843026 | 1.80E-58 | -1.69E-46 |
| MS.gene053575 | MS.gene47818 | 0.839432 | 1.59E-57 | -1.69E-46 |
| MS.gene053575 | MS.gene47967 | 0.802731 | 4.88E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene47995 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene50249 | 0.803615 | 3.20E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene52387 | 0.812536 | 4.04E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene52609 | 0.822129 | 2.79E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene52616 | 0.800552 | 1.37E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene53391 | 0.815525 | 8.84E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene53464 | 0.800523 | 1.38E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene54573 | 0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene55699 | 0.818206 | 2.21E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene55707 | 0.819436 | 1.16E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene57028 | 0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene57360 | 0.810118 | 1.35E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene57765 | 0.815219 | 1.03E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene57768 | 0.803803 | 2.93E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene57783 | 0.808041 | 3.76E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene57894 | 0.819144 | 1.35E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene57980 | 0.810013 | 1.42E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene58571 | 0.800648 | 1.31E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene58627 | 0.822812 | 1.94E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene58653 | 0.827223 | 1.76E-54 | -1.69E-46 |
| MS.gene053575 | MS.gene60399 | 0.829617 | 4.66E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene61064 | 0.809006 | 2.34E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene61162 | 0.859026 | 5.50E-63 | -1.69E-46 |
| MS.gene053575 | MS.gene61239 | 0.843531 | 1.32E-58 | -1.69E-46 |
| MS.gene053575 | MS.gene61282 | 0.802259 | 6.11E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene62676 | 0.815088 | 1.11E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene62677 | 0.810103 | 1.36E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene63930 | 0.810891 | 9.20E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene66452 | 0.804146 | 2.49E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene66960 | 0.806044 | 9.96E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene67010 | 0.806785 | 6.95E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene67662 | 0.800397 | 1.47E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene68895 | 0.81008 | 1.38E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene69691 | 0.820854 | 5.50E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene69692 | 0.81232 | 4.50E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene69779 | 0.800727 | 1.26E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene70154 | 0.80039 | 1.47E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene71236 | 0.804516 | 2.08E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene71867 | 0.805804 | 1.12E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene71994 | 0.808136 | 3.59E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene72748 | 0.802073 | 6.67E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene73859 | 0.807303 | 5.40E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene74758 | 0.820366 | 7.12E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene76244 | 0.815018 | 1.15E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene76494 | 0.827768 | 1.30E-54 | -1.69E-46 |
| MS.gene053575 | MS.gene76755 | 0.831088 | 2.04E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene76849 | 0.804702 | 1.90E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene80201 | 0.826049 | 3.36E-54 | -1.69E-46 |
| MS.gene053575 | MS.gene80237 | 0.821361 | 4.21E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene80715 | 0.807005 | 6.24E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene82806 | 0.824141 | 9.48E-54 | -1.69E-46 |
| MS.gene053575 | MS.gene83022 | 0.814526 | 1.47E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene83687 | 0.803453 | 3.46E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene85109 | 0.812212 | 4.75E-51 | -1.69E-46 |
| MS.gene053575 | MS.gene85111 | 0.816876 | 4.41E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene86038 | 0.817178 | 3.77E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene86455 | 0.816059 | 6.72E-52 | -1.69E-46 |
| MS.gene053575 | MS.gene90217 | 0.994178 | 3.58E-205 | -1.69E-46 |
| MS.gene053575 | MS.gene90263 | 0.800971 | 1.12E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene91307 | 0.809872 | 1.53E-50 | -1.69E-46 |
| MS.gene053575 | MS.gene92340 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene053575 | MS.gene95040 | 0.825543 | 4.43E-54 | -1.69E-46 |
| MS.gene053575 | MS.gene95096 | 0.831973 | 1.23E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene96209 | 0.821864 | 3.22E-53 | -1.69E-46 |
| MS.gene053575 | MS.gene96287 | 0.829752 | 4.32E-55 | -1.69E-46 |
| MS.gene053575 | MS.gene96835 | 0.846132 | 2.63E-59 | -1.69E-46 |
| MS.gene053575 | MS.gene97281 | 0.801301 | 9.61E-49 | -1.69E-46 |
| MS.gene053575 | MS.gene97784 | 0.831891 | 1.29E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053575.t1 | MTR_4g093570 | 97.561 | 410 | 10 | 0 | 1 | 410 | 1 | 410 | 0.0 | 838 |
| MS.gene053575.t1 | MTR_4g093580 | 85.714 | 413 | 57 | 1 | 1 | 411 | 1 | 413 | 0.0 | 750 |
| MS.gene053575.t1 | MTR_4g093580 | 87.097 | 372 | 48 | 0 | 40 | 411 | 9 | 380 | 0.0 | 692 |
| MS.gene053575.t1 | MTR_4g093580 | 87.313 | 268 | 34 | 0 | 144 | 411 | 1 | 268 | 0.0 | 505 |
| MS.gene053575.t1 | MTR_2g086600 | 28.364 | 275 | 177 | 6 | 123 | 389 | 30 | 292 | 5.91e-26 | 107 |
| MS.gene053575.t1 | MTR_6g034725 | 82.927 | 41 | 7 | 0 | 180 | 220 | 1 | 41 | 1.74e-17 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053575.t1 | AT5G64370 | 80.637 | 408 | 73 | 1 | 4 | 411 | 6 | 407 | 0.0 | 685 |
| MS.gene053575.t1 | AT2G27450 | 28.986 | 276 | 174 | 8 | 123 | 389 | 31 | 293 | 5.40e-26 | 107 |
| MS.gene053575.t1 | AT2G27450 | 28.832 | 274 | 173 | 8 | 125 | 389 | 60 | 320 | 2.11e-25 | 105 |
| MS.gene053575.t1 | AT2G27450 | 30.303 | 231 | 132 | 5 | 171 | 389 | 1 | 214 | 1.16e-23 | 98.6 |
| MS.gene053575.t1 | AT5G12040 | 23.762 | 303 | 184 | 11 | 96 | 385 | 90 | 358 | 2.10e-11 | 65.5 |
Find 108 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAACACTGCCGTCGTAAT+TGG | 0.183164 | 4.4:+21352938 | MS.gene053575:CDS |
| GAGAGAGCTGTAGCAGATTC+TGG | 0.218580 | 4.4:-21350157 | None:intergenic |
| CCAAAAGCTAGCCAATTTAA+AGG | 0.249204 | 4.4:-21353203 | None:intergenic |
| CCTTTAAATTGGCTAGCTTT+TGG | 0.257247 | 4.4:+21353203 | MS.gene053575:CDS |
| GTAGGCACCATCCTTTAAAT+TGG | 0.259784 | 4.4:+21353192 | MS.gene053575:CDS |
| ATGACTTGAGGCTCAAATTC+TGG | 0.264920 | 4.4:-21353795 | None:intergenic |
| CCAAATGCTGTTTCAAATAC+AGG | 0.269155 | 4.4:-21353143 | None:intergenic |
| TTGCCATCACCAGATGTAAA+TGG | 0.271319 | 4.4:-21353561 | None:intergenic |
| GGGAATCACGGCAATATAAT+TGG | 0.276293 | 4.4:+21352959 | MS.gene053575:CDS |
| AAACCAGCACACGCAGATTT+TGG | 0.292452 | 4.4:+21353582 | MS.gene053575:CDS |
| TTCACATCTCTCTCAAGAAT+TGG | 0.306659 | 4.4:-21352899 | None:intergenic |
| CACCATCTTTATCACGTAAC+AGG | 0.314327 | 4.4:+21353652 | MS.gene053575:CDS |
| AGTCCCCAACTCTTGGAATA+TGG | 0.318877 | 4.4:-21353079 | None:intergenic |
| CCTGTATTTGAAACAGCATT+TGG | 0.321930 | 4.4:+21353143 | MS.gene053575:CDS |
| GAAGTCAATCGTTTGCTTAC+CGG | 0.328217 | 4.4:+21350097 | MS.gene053575:CDS |
| GAACCAGCAGCATCAATAAT+TGG | 0.344011 | 4.4:-21352626 | None:intergenic |
| CCCAACAACTGCTCACTTTG+TGG | 0.348484 | 4.4:+21352571 | MS.gene053575:CDS |
| ATTGATGCTGCTGGTTCATC+GGG | 0.349034 | 4.4:+21352632 | MS.gene053575:CDS |
| ATAAAACAACGAACCTCTAT+TGG | 0.350893 | 4.4:-21353293 | None:intergenic |
| TTGCTTCAATCAACCGGGTT+GGG | 0.362357 | 4.4:+21353520 | MS.gene053575:CDS |
| CCTACCATAACATATATTAA+TGG | 0.364600 | 4.4:-21353174 | None:intergenic |
| CAATGAGAGCACATATTATA+TGG | 0.366751 | 4.4:+21353103 | MS.gene053575:CDS |
| TCCAACGATGGTTCTATTTG+TGG | 0.375589 | 4.4:+21349757 | MS.gene053575:CDS |
| ATTGCCATTAATATATGTTA+TGG | 0.379087 | 4.4:+21353170 | MS.gene053575:CDS |
| TCACCAGATGTAAATGGATT+GGG | 0.386036 | 4.4:-21353555 | None:intergenic |
| TCTTAAACCGCATCATTTCC+AGG | 0.390604 | 4.4:+21349813 | MS.gene053575:CDS |
| TATTGATGCTGCTGGTTCAT+CGG | 0.405269 | 4.4:+21352631 | MS.gene053575:CDS |
| ACTTTGTTGCTTCAATCAAC+CGG | 0.408788 | 4.4:+21353514 | MS.gene053575:CDS |
| TCACATCTCTCTCAAGAATT+GGG | 0.410904 | 4.4:-21352898 | None:intergenic |
| TTAAGATCTCTTATGAAGTA+AGG | 0.417246 | 4.4:-21353826 | None:intergenic |
| CAGGCAATATAAAGACAAAT+GGG | 0.420095 | 4.4:+21353713 | MS.gene053575:CDS |
| GCAGGCAATATAAAGACAAA+TGG | 0.433044 | 4.4:+21353712 | MS.gene053575:CDS |
| AGAGAGCTGTAGCAGATTCT+GGG | 0.435033 | 4.4:-21350156 | None:intergenic |
| ACTCGTATCGTGCAGTCATT+CGG | 0.435404 | 4.4:-21353740 | None:intergenic |
| AAGTCAATCGTTTGCTTACC+GGG | 0.436307 | 4.4:+21350098 | MS.gene053575:CDS |
| GGAACACTGCCGTCGTAATT+GGG | 0.441423 | 4.4:+21352939 | MS.gene053575:CDS |
| TTCCCCAATCCATTTACATC+TGG | 0.449318 | 4.4:+21353552 | MS.gene053575:CDS |
| TCATTGAAGTCCCCAACTCT+TGG | 0.451173 | 4.4:-21353086 | None:intergenic |
| AGAACCATATTCCAAGAGTT+GGG | 0.459086 | 4.4:+21353075 | MS.gene053575:intron |
| TATTATATGGAAGGAAATAC+TGG | 0.461685 | 4.4:+21353116 | MS.gene053575:CDS |
| ATCACCAGATGTAAATGGAT+TGG | 0.462321 | 4.4:-21353556 | None:intergenic |
| AGTTCACCAACGGTGGCAGC+AGG | 0.464830 | 4.4:-21353254 | None:intergenic |
| TTTGTTGATTCTCCATCAGC+AGG | 0.469168 | 4.4:-21352830 | None:intergenic |
| CAGAACCATATTCCAAGAGT+TGG | 0.474049 | 4.4:+21353074 | MS.gene053575:intron |
| TCCACAAAGTGAGCAGTTGT+TGG | 0.476086 | 4.4:-21352572 | None:intergenic |
| TGAACCTATGTGGCCAATAG+AGG | 0.477225 | 4.4:+21353280 | MS.gene053575:CDS |
| GAACCTCGAGTTGTGAGGGT+TGG | 0.495984 | 4.4:+21352524 | MS.gene053575:CDS |
| CAAATGCTGTTTCAAATACA+GGG | 0.500838 | 4.4:-21353142 | None:intergenic |
| GTTGCTTCAATCAACCGGGT+TGG | 0.501321 | 4.4:+21353519 | MS.gene053575:CDS |
| GAGCCAATTATTGATGCTGC+TGG | 0.502901 | 4.4:+21352623 | MS.gene053575:CDS |
| TTGCTTACCGGGCTTAATTG+TGG | 0.511919 | 4.4:+21350109 | MS.gene053575:CDS |
| CCATTAATATATGTTATGGT+AGG | 0.513345 | 4.4:+21353174 | MS.gene053575:CDS |
| CGAACCTCTATTGGCCACAT+AGG | 0.516696 | 4.4:-21353284 | None:intergenic |
| TCCCGTGTACAAAAGGCAAA+TGG | 0.518582 | 4.4:-21352782 | None:intergenic |
| ACATGGATCTTAACTTGTGC+AGG | 0.523148 | 4.4:+21353694 | MS.gene053575:CDS |
| TAAGATCTCTTATGAAGTAA+GGG | 0.530932 | 4.4:-21353825 | None:intergenic |
| GATGGTGTGCAGGATGCATC+TGG | 0.531632 | 4.4:-21353636 | None:intergenic |
| TAATTTGATTGCAGGAAGCA+TGG | 0.533298 | 4.4:+21352753 | MS.gene053575:intron |
| CTTTGTTGCTTCAATCAACC+GGG | 0.534469 | 4.4:+21353515 | MS.gene053575:CDS |
| TATCCTTGAGAAGATGATGA+AGG | 0.543490 | 4.4:-21349789 | None:intergenic |
| TTCCCTTCATCATCTTCTCA+AGG | 0.544283 | 4.4:+21349786 | MS.gene053575:CDS |
| TTCAACCCTGCTGCCACCGT+TGG | 0.546662 | 4.4:+21353248 | MS.gene053575:CDS |
| GAGAGCACATATTATATGGA+AGG | 0.557147 | 4.4:+21353107 | MS.gene053575:CDS |
| TGACCAAAATCTGCGTGTGC+TGG | 0.559199 | 4.4:-21353585 | None:intergenic |
| AAATAGAACCATCGTTGGAA+AGG | 0.568254 | 4.4:-21349753 | None:intergenic |
| TGAACCATGGAGAGGTTATG+TGG | 0.571388 | 4.4:+21352918 | MS.gene053575:CDS |
| TCTTATGAAGTAAGGGGTCA+CGG | 0.579111 | 4.4:-21353818 | None:intergenic |
| AAGAGAACCTCGAGTTGTGA+GGG | 0.579546 | 4.4:+21352520 | MS.gene053575:CDS |
| CCACAAAGTGAGCAGTTGTT+GGG | 0.579558 | 4.4:-21352571 | None:intergenic |
| AAGCTAGCCAATTTAAAGGA+TGG | 0.586492 | 4.4:-21353199 | None:intergenic |
| GCCACAAATAGAACCATCGT+TGG | 0.590523 | 4.4:-21349758 | None:intergenic |
| AATCCATTTACATCTGGTGA+TGG | 0.592464 | 4.4:+21353558 | MS.gene053575:CDS |
| ATCCTTGAGAAGATGATGAA+GGG | 0.596320 | 4.4:-21349788 | None:intergenic |
| AAAGTGAGCAGTTGTTGGGA+TGG | 0.597586 | 4.4:-21352567 | None:intergenic |
| CAACTCAACCTTTCCAACGA+TGG | 0.598188 | 4.4:+21349745 | MS.gene053575:CDS |
| TAAGAGAACCTCGAGTTGTG+AGG | 0.598332 | 4.4:+21352519 | MS.gene053575:CDS |
| ACGTGATAAAGATGGTGTGC+AGG | 0.598654 | 4.4:-21353646 | None:intergenic |
| GAGATGGAGAAGTCTCAAAA+CGG | 0.600165 | 4.4:+21349709 | None:intergenic |
| TGATGCTGCTGGTTCATCGG+GGG | 0.604615 | 4.4:+21352634 | MS.gene053575:CDS |
| GCCGTCGTAATTGGGAATCA+CGG | 0.610219 | 4.4:+21352947 | MS.gene053575:CDS |
| TATAATTGGAATACACAGGA+AGG | 0.612226 | 4.4:+21352973 | MS.gene053575:CDS |
| CTTTGCAAAGAAGTATAACA+TGG | 0.612813 | 4.4:+21352865 | MS.gene053575:CDS |
| CACCAGATGTAAATGGATTG+GGG | 0.615020 | 4.4:-21353554 | None:intergenic |
| TCTTTATCACGTAACAGGGA+TGG | 0.617255 | 4.4:+21353657 | MS.gene053575:CDS |
| AAACCAACCCTCACAACTCG+AGG | 0.620062 | 4.4:-21352527 | None:intergenic |
| AAGGGGTCACGGATGACTTG+AGG | 0.621650 | 4.4:-21353807 | None:intergenic |
| GCAATATAATTGGAATACAC+AGG | 0.623995 | 4.4:+21352969 | MS.gene053575:CDS |
| TTTGTACACGGGAGAAAAGG+TGG | 0.624689 | 4.4:+21352792 | MS.gene053575:CDS |
| GGAATGTCTCAGTCCCAACC+CGG | 0.625592 | 4.4:-21353533 | None:intergenic |
| GAATTTGCAGAACCTGCTGA+TGG | 0.628090 | 4.4:+21352818 | MS.gene053575:CDS |
| AAGATCTCTTATGAAGTAAG+GGG | 0.629006 | 4.4:-21353824 | None:intergenic |
| ACAGCTCTCTCTGTCAAACA+TGG | 0.630470 | 4.4:+21350169 | MS.gene053575:CDS |
| TGTTCCACATAACCTCTCCA+TGG | 0.634118 | 4.4:-21352922 | None:intergenic |
| GAACCATATTCCAAGAGTTG+GGG | 0.634849 | 4.4:+21353076 | MS.gene053575:intron |
| CTTGAGAGAGATGTGAACCA+TGG | 0.640207 | 4.4:+21352905 | MS.gene053575:CDS |
| TTGATGCTGCTGGTTCATCG+GGG | 0.643399 | 4.4:+21352633 | MS.gene053575:CDS |
| TGGCTTATTAGTAACAGACA+TGG | 0.657372 | 4.4:+21353677 | MS.gene053575:CDS |
| TGCACGATACGAGTTGTATG+CGG | 0.660405 | 4.4:+21353749 | MS.gene053575:CDS |
| GTTCACCAACGGTGGCAGCA+GGG | 0.664314 | 4.4:-21353253 | None:intergenic |
| TCCCTGTTACGTGATAAAGA+TGG | 0.671678 | 4.4:-21353654 | None:intergenic |
| GCCGTGATTCCCAATTACGA+CGG | 0.672036 | 4.4:-21352948 | None:intergenic |
| AGGTTCACTGAGTTCACCAA+CGG | 0.675482 | 4.4:-21353264 | None:intergenic |
| ACCATCTTTATCACGTAACA+GGG | 0.675551 | 4.4:+21353653 | MS.gene053575:CDS |
| AGAATGACCTGGAAATGATG+CGG | 0.682019 | 4.4:-21349820 | None:intergenic |
| TTCACTGAGTTCACCAACGG+TGG | 0.688022 | 4.4:-21353261 | None:intergenic |
| AGGCAATATAAAGACAAATG+GGG | 0.695987 | 4.4:+21353714 | MS.gene053575:CDS |
| GAGAGATGTGAACCATGGAG+AGG | 0.699125 | 4.4:+21352910 | MS.gene053575:CDS |
| GTGAACTCAGTGAACCTATG+TGG | 0.733745 | 4.4:+21353270 | MS.gene053575:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAGTAATAATGATAATAAT+TGG | - | chr4.4:21349855-21349874 | None:intergenic | 10.0% |
| !! | AATAATGATGAAAATGATAA+TGG | - | chr4.4:21351259-21351278 | None:intergenic | 15.0% |
| !! | TATATAAAAATAAACACTGT+AGG | - | chr4.4:21352735-21352754 | None:intergenic | 15.0% |
| !!! | AAATCATATTTTTGTTCAAA+AGG | - | chr4.4:21351722-21351703 | None:intergenic | 15.0% |
| !!! | ATCTATACTTCAATTTTTAT+CGG | + | chr4.4:21349881-21349900 | MS.gene053575:intron | 15.0% |
| !!! | TTTTTATATAATTTGATTGC+AGG | + | chr4.4:21352745-21352764 | MS.gene053575:intron | 15.0% |
| !! | ATTATATTATTCAATCTGCA+TGG | + | chr4.4:21350010-21350029 | MS.gene053575:intron | 20.0% |
| !! | ATTGATATTTCGTTAACTAT+AGG | + | chr4.4:21351901-21351920 | MS.gene053575:intron | 20.0% |
| !! | ATTGCCATTAATATATGTTA+TGG | + | chr4.4:21353170-21353189 | MS.gene053575:CDS | 20.0% |
| !! | TCAATTATCATAAATTTGCA+AGG | - | chr4.4:21350585-21350604 | None:intergenic | 20.0% |
| !! | TTGACTAAACAATAGAAAAT+TGG | + | chr4.4:21353426-21353445 | MS.gene053575:intron | 20.0% |
| !! | TTGATATTTCGTTAACTATA+GGG | + | chr4.4:21351902-21351921 | MS.gene053575:intron | 20.0% |
| !! | TTTGAACAAAAATATGATTG+TGG | - | chr4.4:21351671-21351690 | None:intergenic | 20.0% |
| !!! | AAATATGCTTCTAAAACAAT+TGG | + | chr4.4:21350244-21350263 | MS.gene053575:intron | 20.0% |
| !!! | AAGTATTTTCTTATGTGTAT+TGG | - | chr4.4:21351121-21351140 | None:intergenic | 20.0% |
| !!! | CAATCATATTTTTGTTCAAA+AGG | + | chr4.4:21351671-21351690 | MS.gene053575:intron | 20.0% |
| !!! | CTTATTTCTTATTTAAGCTA+TGG | + | chr4.4:21352426-21352445 | MS.gene053575:intron | 20.0% |
| !!! | GTAGTTTTGATTAAAATTCT+TGG | - | chr4.4:21351180-21351199 | None:intergenic | 20.0% |
| ! | AAGTTCATAATCTATGACTA+AGG | - | chr4.4:21350834-21350853 | None:intergenic | 25.0% |
| ! | ACCATTATTGATAAACTACA+GGG | + | chr4.4:21350997-21351016 | MS.gene053575:intron | 25.0% |
| ! | AGAAAATTGGCATGATTATA+TGG | + | chr4.4:21353439-21353458 | MS.gene053575:intron | 25.0% |
| ! | ATGAACAAAGATGATGAATT+CGG | - | chr4.4:21349921-21349940 | None:intergenic | 25.0% |
| ! | ATTGATATTTCGTTAACTAC+AGG | - | chr4.4:21350320-21350339 | None:intergenic | 25.0% |
| ! | CCATTAATATATGTTATGGT+AGG | + | chr4.4:21353174-21353193 | MS.gene053575:CDS | 25.0% |
| ! | CCTACCATAACATATATTAA+TGG | - | chr4.4:21353177-21353196 | None:intergenic | 25.0% |
| ! | TAAATAACATAACATGATCC+AGG | - | chr4.4:21349963-21349982 | None:intergenic | 25.0% |
| ! | TAAGATCTCTTATGAAGTAA+GGG | - | chr4.4:21353828-21353847 | None:intergenic | 25.0% |
| ! | TATGCTTATACTGTCATTAT+AGG | + | chr4.4:21350755-21350774 | MS.gene053575:intron | 25.0% |
| ! | TATTATATGGAAGGAAATAC+TGG | + | chr4.4:21353116-21353135 | MS.gene053575:CDS | 25.0% |
| ! | TCTAATGAACACAAAACATT+TGG | + | chr4.4:21353051-21353070 | MS.gene053575:intron | 25.0% |
| ! | TGACTAACGTTTATCAATTT+CGG | + | chr4.4:21351871-21351890 | MS.gene053575:intron | 25.0% |
| ! | TGACTAACGTTTATCAATTT+CGG | - | chr4.4:21351890-21351871 | None:intergenic | 25.0% |
| ! | TGATATTTCGTTAACTATAG+GGG | + | chr4.4:21351903-21351922 | MS.gene053575:intron | 25.0% |
| ! | TTAAGATCTCTTATGAAGTA+AGG | - | chr4.4:21353829-21353848 | None:intergenic | 25.0% |
| ! | TTCAACAAATCAAAGATTTC+AGG | - | chr4.4:21351544-21351563 | None:intergenic | 25.0% |
| ! | TTGATATTTCGTTAACTACA+GGG | - | chr4.4:21350319-21350338 | None:intergenic | 25.0% |
| ! | TTGTTTCCAACAATGTTTAA+CGG | + | chr4.4:21352139-21352158 | MS.gene053575:intron | 25.0% |
| ! | TTTGAACACAATTTCAGAAA+TGG | - | chr4.4:21351345-21351364 | None:intergenic | 25.0% |
| !! | AATCTTTCCTTTTTCTTGTA+TGG | + | chr4.4:21352316-21352335 | MS.gene053575:intron | 25.0% |
| !! | TTGTTTAGTCAATTTTCTGT+AGG | - | chr4.4:21353418-21353437 | None:intergenic | 25.0% |
| !!! | ATGTTGATGATGACTTAAAT+TGG | + | chr4.4:21351397-21351416 | MS.gene053575:intron | 25.0% |
| !!! | ATTTTAAGTTTACTTGTCTC+AGG | + | chr4.4:21352466-21352485 | MS.gene053575:intron | 25.0% |
| !!! | TATAGGTGTTATTGTTTTTC+AGG | + | chr4.4:21353464-21353483 | MS.gene053575:intron | 25.0% |
| AACAAAAATATGATTGTGGC+AGG | - | chr4.4:21351667-21351686 | None:intergenic | 30.0% | |
| AAGATCTCTTATGAAGTAAG+GGG | - | chr4.4:21353827-21353846 | None:intergenic | 30.0% | |
| AAGTGAATTGTATTCATACC+TGG | - | chr4.4:21350204-21350223 | None:intergenic | 30.0% | |
| AATAAACACTGTAGGATTTC+TGG | - | chr4.4:21352727-21352746 | None:intergenic | 30.0% | |
| ACAAAAATATGATTGTGGCA+GGG | - | chr4.4:21351666-21351685 | None:intergenic | 30.0% | |
| ACAACAACCATACAAGAAAA+AGG | - | chr4.4:21352326-21352345 | None:intergenic | 30.0% | |
| ACTAACGTTTATCAATTTCG+GGG | + | chr4.4:21351873-21351892 | MS.gene053575:intron | 30.0% | |
| ACTAACGTTTATCAATTTCG+GGG | - | chr4.4:21351892-21351873 | None:intergenic | 30.0% | |
| AGAAACAATAATCAGCAGAA+AGG | - | chr4.4:21353342-21353361 | None:intergenic | 30.0% | |
| AGAAATAAGTTTCAATGCAG+AGG | - | chr4.4:21352415-21352434 | None:intergenic | 30.0% | |
| AGCCCAAATAATTCAAATAC+AGG | + | chr4.4:21350964-21350983 | MS.gene053575:intron | 30.0% | |
| AGGCAATATAAAGACAAATG+GGG | + | chr4.4:21353714-21353733 | MS.gene053575:CDS | 30.0% | |
| AGTGAATTGTATTCATACCT+GGG | - | chr4.4:21350203-21350222 | None:intergenic | 30.0% | |
| ATAAAACAACGAACCTCTAT+TGG | - | chr4.4:21353296-21353315 | None:intergenic | 30.0% | |
| ATATTTCGTTAACTATAGGG+GGG | + | chr4.4:21351905-21351924 | MS.gene053575:intron | 30.0% | |
| ATTATTGATAAACTACAGGG+GGG | + | chr4.4:21351000-21351019 | MS.gene053575:intron | 30.0% | |
| ATTTAAGCTATGGTATTCGT+TGG | + | chr4.4:21352436-21352455 | MS.gene053575:intron | 30.0% | |
| CAAATAATTCAAATACAGGG+GGG | + | chr4.4:21350968-21350987 | MS.gene053575:intron | 30.0% | |
| CAGGCAATATAAAGACAAAT+GGG | + | chr4.4:21353713-21353732 | MS.gene053575:CDS | 30.0% | |
| CATTATTGATAAACTACAGG+GGG | + | chr4.4:21350999-21351018 | MS.gene053575:intron | 30.0% | |
| CCAAATAATTCAAATACAGG+GGG | + | chr4.4:21350967-21350986 | MS.gene053575:intron | 30.0% | |
| CCATTATTGATAAACTACAG+GGG | + | chr4.4:21350998-21351017 | MS.gene053575:intron | 30.0% | |
| CCCAAATAATTCAAATACAG+GGG | + | chr4.4:21350966-21350985 | MS.gene053575:intron | 30.0% | |
| CCCCTGTATTTGAATTATTT+GGG | - | chr4.4:21350969-21350988 | None:intergenic | 30.0% | |
| CGATCATTCAATCCATATTT+CGG | - | chr4.4:21352211-21352230 | None:intergenic | 30.0% | |
| GACCATTATTGATAAACTAC+AGG | + | chr4.4:21350996-21351015 | MS.gene053575:intron | 30.0% | |
| GACTAACGTTTATCAATTTC+GGG | + | chr4.4:21351872-21351891 | MS.gene053575:intron | 30.0% | |
| GACTAACGTTTATCAATTTC+GGG | - | chr4.4:21351891-21351872 | None:intergenic | 30.0% | |
| GATAGTATTGTTGTGTATGT+TGG | - | chr4.4:21351202-21351221 | None:intergenic | 30.0% | |
| GATATTTCGTTAACTATAGG+GGG | + | chr4.4:21351904-21351923 | MS.gene053575:intron | 30.0% | |
| GCAATATAATTGGAATACAC+AGG | + | chr4.4:21352969-21352988 | MS.gene053575:CDS | 30.0% | |
| GCCCAAATAATTCAAATACA+GGG | + | chr4.4:21350965-21350984 | MS.gene053575:intron | 30.0% | |
| GTATTGGAAACAAATGTAAG+AGG | - | chr4.4:21351105-21351124 | None:intergenic | 30.0% | |
| GTTGTCTATCAAATTATCGT+CGG | + | chr4.4:21352341-21352360 | MS.gene053575:intron | 30.0% | |
| TAACAGGAAGTGAAATTACT+TGG | + | chr4.4:21352102-21352121 | MS.gene053575:intron | 30.0% | |
| TATAATTGGAATACACAGGA+AGG | + | chr4.4:21352973-21352992 | MS.gene053575:CDS | 30.0% | |
| TGATATTTCGTTAACTACAG+GGG | - | chr4.4:21350318-21350337 | None:intergenic | 30.0% | |
| TGTTTCCAACAATGTTTAAC+GGG | + | chr4.4:21352140-21352159 | MS.gene053575:intron | 30.0% | |
| TTCATTAGATAGCTGAAAGA+CGG | - | chr4.4:21353040-21353059 | None:intergenic | 30.0% | |
| ! | ATATATGACTTTGACTTTCC+TGG | + | chr4.4:21349942-21349961 | MS.gene053575:intron | 30.0% |
| ! | CAATGAGAGCACATATTATA+TGG | + | chr4.4:21353103-21353122 | MS.gene053575:CDS | 30.0% |
| ! | CTTTGCAAAGAAGTATAACA+TGG | + | chr4.4:21352865-21352884 | MS.gene053575:CDS | 30.0% |
| ! | TTTTCACTCTTTCCTAACTA+GGG | + | chr4.4:21352286-21352305 | MS.gene053575:intron | 30.0% |
| ! | TTTTTCACTCTTTCCTAACT+AGG | + | chr4.4:21352285-21352304 | MS.gene053575:intron | 30.0% |
| !! | CAAATGCTGTTTCAAATACA+GGG | - | chr4.4:21353145-21353164 | None:intergenic | 30.0% |
| !! | GGTTCGTTGTTTTATATTGA+TGG | + | chr4.4:21353301-21353320 | MS.gene053575:intron | 30.0% |
| !!! | GCAGATTTTGGTCATTTTTA+TGG | + | chr4.4:21353594-21353613 | MS.gene053575:CDS | 30.0% |
| !!! | TCTCAAAAAGTGCCTTTTTT+TGG | - | chr4.4:21352598-21352617 | None:intergenic | 30.0% |
| AAATAGAACCATCGTTGGAA+AGG | - | chr4.4:21349756-21349775 | None:intergenic | 35.0% | |
| AACATACTATGCTTGCAAGT+AGG | + | chr4.4:21352659-21352678 | MS.gene053575:intron | 35.0% | |
| AAGCTAGCCAATTTAAAGGA+TGG | - | chr4.4:21353202-21353221 | None:intergenic | 35.0% | |
| AAGGAAGGATCTAAACTACT+AGG | - | chr4.4:21351497-21351516 | None:intergenic | 35.0% | |
| AATCCATTTACATCTGGTGA+TGG | + | chr4.4:21353558-21353577 | MS.gene053575:CDS | 35.0% | |
| ACAAACAGAACTAGCATAAC+AGG | + | chr4.4:21350926-21350945 | MS.gene053575:intron | 35.0% | |
| ACCATCTTTATCACGTAACA+GGG | + | chr4.4:21353653-21353672 | MS.gene053575:CDS | 35.0% | |
| AGAACCATATTCCAAGAGTT+GGG | + | chr4.4:21353075-21353094 | MS.gene053575:intron | 35.0% | |
| AGATTAATTGTCCCCTAGTT+AGG | - | chr4.4:21352301-21352320 | None:intergenic | 35.0% | |
| AGTAGTTTAGATCCTTCCTT+AGG | + | chr4.4:21351497-21351516 | MS.gene053575:intron | 35.0% | |
| ATATTTCGTTAACTACAGGG+GGG | - | chr4.4:21350316-21350335 | None:intergenic | 35.0% | |
| ATCACCAGATGTAAATGGAT+TGG | - | chr4.4:21353559-21353578 | None:intergenic | 35.0% | |
| ATCCTTGAGAAGATGATGAA+GGG | - | chr4.4:21349791-21349810 | None:intergenic | 35.0% | |
| ATTATGAACTTAGACACTGC+AGG | + | chr4.4:21350843-21350862 | MS.gene053575:intron | 35.0% | |
| CAAAAATATGATTGTGGCAG+GGG | - | chr4.4:21351665-21351684 | None:intergenic | 35.0% | |
| CCAAAAGCTAGCCAATTTAA+AGG | - | chr4.4:21353206-21353225 | None:intergenic | 35.0% | |
| CCCCCTGTATTTGAATTATT+TGG | - | chr4.4:21350970-21350989 | None:intergenic | 35.0% | |
| CCCCTGTAGTTTATCAATAA+TGG | - | chr4.4:21351001-21351020 | None:intergenic | 35.0% | |
| CTAACGTTTATCAATTTCGG+GGG | + | chr4.4:21351874-21351893 | MS.gene053575:intron | 35.0% | |
| CTAACGTTTATCAATTTCGG+GGG | - | chr4.4:21351893-21351874 | None:intergenic | 35.0% | |
| CTTTCTACTTCTGCTTCTAA+TGG | + | chr4.4:21353009-21353028 | MS.gene053575:intron | 35.0% | |
| GAAGCAGAAGTAGAAAGTTT+AGG | - | chr4.4:21353006-21353025 | None:intergenic | 35.0% | |
| GATATTTCGTTAACTACAGG+GGG | - | chr4.4:21350317-21350336 | None:intergenic | 35.0% | |
| GCAGGCAATATAAAGACAAA+TGG | + | chr4.4:21353712-21353731 | MS.gene053575:CDS | 35.0% | |
| GGCATGATTATATGGCTTAT+AGG | + | chr4.4:21353447-21353466 | MS.gene053575:intron | 35.0% | |
| GTAGTTTAGATCCTTCCTTA+GGG | + | chr4.4:21351498-21351517 | MS.gene053575:intron | 35.0% | |
| TAACGTTTATCAATTTCGGG+GGG | + | chr4.4:21351875-21351894 | MS.gene053575:intron | 35.0% | |
| TAACGTTTATCAATTTCGGG+GGG | - | chr4.4:21351894-21351875 | None:intergenic | 35.0% | |
| TAATTTGATTGCAGGAAGCA+TGG | + | chr4.4:21352753-21352772 | MS.gene053575:intron | 35.0% | |
| TATCCTTGAGAAGATGATGA+AGG | - | chr4.4:21349792-21349811 | None:intergenic | 35.0% | |
| TCACATCTCTCTCAAGAATT+GGG | - | chr4.4:21352901-21352920 | None:intergenic | 35.0% | |
| TCACTTTGTGGACCAAAAAA+AGG | + | chr4.4:21352583-21352602 | MS.gene053575:CDS | 35.0% | |
| TCATTAGATAGCTGAAAGAC+GGG | - | chr4.4:21353039-21353058 | None:intergenic | 35.0% | |
| TGGCTTATTAGTAACAGACA+TGG | + | chr4.4:21353677-21353696 | MS.gene053575:CDS | 35.0% | |
| TGGTGTTTAGAAGCAATTGT+GGG | + | chr4.4:21351417-21351436 | MS.gene053575:intron | 35.0% | |
| TGTTGGATGGAGGAAATTAA+CGG | + | chr4.4:21351837-21351856 | MS.gene053575:intron | 35.0% | |
| TGTTGGATGGAGGAAATTAA+CGG | - | chr4.4:21351856-21351837 | None:intergenic | 35.0% | |
| TTCACATCTCTCTCAAGAAT+TGG | - | chr4.4:21352902-21352921 | None:intergenic | 35.0% | |
| TTCAGAAATGGTGAAGTTGA+TGG | - | chr4.4:21351333-21351352 | None:intergenic | 35.0% | |
| TTTCACTCTTTCCTAACTAG+GGG | + | chr4.4:21352287-21352306 | MS.gene053575:intron | 35.0% | |
| ! | ACTTTGTTGCTTCAATCAAC+CGG | + | chr4.4:21353514-21353533 | MS.gene053575:CDS | 35.0% |
| ! | CCTGTATTTGAAACAGCATT+TGG | + | chr4.4:21353143-21353162 | MS.gene053575:CDS | 35.0% |
| ! | GAGAGCACATATTATATGGA+AGG | + | chr4.4:21353107-21353126 | MS.gene053575:CDS | 35.0% |
| ! | GGGAATTGAAGTTTGCTTTA+GGG | - | chr4.4:21351285-21351304 | None:intergenic | 35.0% |
| ! | TCACCAGATGTAAATGGATT+GGG | - | chr4.4:21353558-21353577 | None:intergenic | 35.0% |
| ! | TTGGTGTTTAGAAGCAATTG+TGG | + | chr4.4:21351416-21351435 | MS.gene053575:intron | 35.0% |
| !! | CCAAATGCTGTTTCAAATAC+AGG | - | chr4.4:21353146-21353165 | None:intergenic | 35.0% |
| !! | TGTTATGCTAGTTCTGTTTG+TGG | - | chr4.4:21350927-21350946 | None:intergenic | 35.0% |
| !!! | CCTTTAAATTGGCTAGCTTT+TGG | + | chr4.4:21353203-21353222 | MS.gene053575:CDS | 35.0% |
| AACGTTTATCAATTTCGGGG+GGG | + | chr4.4:21351876-21351895 | MS.gene053575:intron | 40.0% | |
| AACGTTTATCAATTTCGGGG+GGG | - | chr4.4:21351895-21351876 | None:intergenic | 40.0% | |
| AAGTCAATCGTTTGCTTACC+GGG | + | chr4.4:21350098-21350117 | MS.gene053575:CDS | 40.0% | |
| AGAATGACCTGGAAATGATG+CGG | - | chr4.4:21349823-21349842 | None:intergenic | 40.0% | |
| ATCTAACATAACCCACCCTA+AGG | - | chr4.4:21351516-21351535 | None:intergenic | 40.0% | |
| ATGACTTGAGGCTCAAATTC+TGG | - | chr4.4:21353798-21353817 | None:intergenic | 40.0% | |
| CACCATCTTTATCACGTAAC+AGG | + | chr4.4:21353652-21353671 | MS.gene053575:CDS | 40.0% | |
| CACTTCCCGTTAAACATTGT+TGG | - | chr4.4:21352148-21352167 | None:intergenic | 40.0% | |
| CACTTCCTGTTAAACATTGC+TGG | - | chr4.4:21352094-21352113 | None:intergenic | 40.0% | |
| CAGAACCATATTCCAAGAGT+TGG | + | chr4.4:21353074-21353093 | MS.gene053575:intron | 40.0% | |
| CGTTTCCAGCAATGTTTAAC+AGG | + | chr4.4:21352086-21352105 | MS.gene053575:intron | 40.0% | |
| GAACCAGCAGCATCAATAAT+TGG | - | chr4.4:21352629-21352648 | None:intergenic | 40.0% | |
| GAACCATATTCCAAGAGTTG+GGG | + | chr4.4:21353076-21353095 | MS.gene053575:intron | 40.0% | |
| GAAGTCAATCGTTTGCTTAC+CGG | + | chr4.4:21350097-21350116 | MS.gene053575:CDS | 40.0% | |
| GGGAATCACGGCAATATAAT+TGG | + | chr4.4:21352959-21352978 | MS.gene053575:CDS | 40.0% | |
| GGTTTGAAAGAAGAATGACC+TGG | - | chr4.4:21349834-21349853 | None:intergenic | 40.0% | |
| GTAGGCACCATCCTTTAAAT+TGG | + | chr4.4:21353192-21353211 | MS.gene053575:CDS | 40.0% | |
| TAGAAGCAATTGTGGGAGAA+AGG | + | chr4.4:21351424-21351443 | MS.gene053575:intron | 40.0% | |
| TCCCTGTTACGTGATAAAGA+TGG | - | chr4.4:21353657-21353676 | None:intergenic | 40.0% | |
| TCTTAAACCGCATCATTTCC+AGG | + | chr4.4:21349813-21349832 | MS.gene053575:CDS | 40.0% | |
| TCTTATGAAGTAAGGGGTCA+CGG | - | chr4.4:21353821-21353840 | None:intergenic | 40.0% | |
| TCTTTATCACGTAACAGGGA+TGG | + | chr4.4:21353657-21353676 | MS.gene053575:CDS | 40.0% | |
| TTCCCCAATCCATTTACATC+TGG | + | chr4.4:21353552-21353571 | MS.gene053575:CDS | 40.0% | |
| TTCCCTTCATCATCTTCTCA+AGG | + | chr4.4:21349786-21349805 | MS.gene053575:CDS | 40.0% | |
| TTGCCATCACCAGATGTAAA+TGG | - | chr4.4:21353564-21353583 | None:intergenic | 40.0% | |
| TTTAGATCCTTCCTTAGGGT+GGG | + | chr4.4:21351502-21351521 | MS.gene053575:intron | 40.0% | |
| TTTGATTGTGTGGCAGGTTT+CGG | - | chr4.4:21351592-21351611 | None:intergenic | 40.0% | |
| ! | AATCTGCATGGAAAGTGCAT+TGG | + | chr4.4:21350022-21350041 | MS.gene053575:intron | 40.0% |
| ! | CACTTTTCCACAATTAAGCC+CGG | - | chr4.4:21350119-21350138 | None:intergenic | 40.0% |
| ! | CTTTGTTGCTTCAATCAACC+GGG | + | chr4.4:21353515-21353534 | MS.gene053575:CDS | 40.0% |
| ! | GGGGAATTGAAGTTTGCTTT+AGG | - | chr4.4:21351286-21351305 | None:intergenic | 40.0% |
| ! | GGTTTTTGACACGAACTTGT+TGG | + | chr4.4:21351021-21351040 | MS.gene053575:intron | 40.0% |
| ! | TCCAACGATGGTTCTATTTG+TGG | + | chr4.4:21349757-21349776 | MS.gene053575:CDS | 40.0% |
| !! | CACCAGATGTAAATGGATTG+GGG | - | chr4.4:21353557-21353576 | None:intergenic | 40.0% |
| !! | CTTGGATTGGTTAAACGAGA+TGG | + | chr4.4:21352374-21352393 | MS.gene053575:intron | 40.0% |
| !! | GTTGATGGTGTGTTTCGATT+TGG | - | chr4.4:21351318-21351337 | None:intergenic | 40.0% |
| !! | GTTTCGATTTGGACAGAAGA+GGG | - | chr4.4:21351307-21351326 | None:intergenic | 40.0% |
| !! | TATTGATGCTGCTGGTTCAT+CGG | + | chr4.4:21352631-21352650 | MS.gene053575:CDS | 40.0% |
| !! | TGCCATTTGCCTTTTGTACA+CGG | + | chr4.4:21352780-21352799 | MS.gene053575:CDS | 40.0% |
| !! | TGTTTCGATTTGGACAGAAG+AGG | - | chr4.4:21351308-21351327 | None:intergenic | 40.0% |
| !! | TTTCGATTTGGACAGAAGAG+GGG | - | chr4.4:21351306-21351325 | None:intergenic | 40.0% |
| !! | TTTGTTGATTCTCCATCAGC+AGG | - | chr4.4:21352833-21352852 | None:intergenic | 40.0% |
| !!! | AGCTTTTGGCTTAAATGGTG+CGG | + | chr4.4:21353217-21353236 | MS.gene053575:CDS | 40.0% |
| !!! | TGCTGCTGCTTTTTAAGTCA+TGG | + | chr4.4:21352006-21352025 | MS.gene053575:intron | 40.0% |
| !!! | TGGCTAGCTTTTGGCTTAAA+TGG | + | chr4.4:21353212-21353231 | MS.gene053575:CDS | 40.0% |
| AAAGTGAGCAGTTGTTGGGA+TGG | - | chr4.4:21352570-21352589 | None:intergenic | 45.0% | |
| AACATAACCCACCCTAAGGA+AGG | - | chr4.4:21351512-21351531 | None:intergenic | 45.0% | |
| AATACCCCCCTGAAATTGCA+AGG | + | chr4.4:21350279-21350298 | MS.gene053575:intron | 45.0% | |
| ACAGCTCTCTCTGTCAAACA+TGG | + | chr4.4:21350169-21350188 | MS.gene053575:CDS | 45.0% | |
| ACGTGATAAAGATGGTGTGC+AGG | - | chr4.4:21353649-21353668 | None:intergenic | 45.0% | |
| ACTCGTATCGTGCAGTCATT+CGG | - | chr4.4:21353743-21353762 | None:intergenic | 45.0% | |
| AGAGAGCTGTAGCAGATTCT+GGG | - | chr4.4:21350159-21350178 | None:intergenic | 45.0% | |
| AGGTTCACTGAGTTCACCAA+CGG | - | chr4.4:21353267-21353286 | None:intergenic | 45.0% | |
| AGTCCCCAACTCTTGGAATA+TGG | - | chr4.4:21353082-21353101 | None:intergenic | 45.0% | |
| ATCGTCGGAATCTATGAGCT+TGG | + | chr4.4:21352356-21352375 | MS.gene053575:intron | 45.0% | |
| ATGGAGGAAATTAACGGAGG+GGG | + | chr4.4:21351843-21351862 | MS.gene053575:intron | 45.0% | |
| ATGGAGGAAATTAACGGAGG+GGG | - | chr4.4:21351862-21351843 | None:intergenic | 45.0% | |
| ATTGACGCGCCTTGCAATTT+CGG | + | chr4.4:21351930-21351949 | MS.gene053575:intron | 45.0% | |
| CAACTCAACCTTTCCAACGA+TGG | + | chr4.4:21349745-21349764 | MS.gene053575:CDS | 45.0% | |
| CAATTGTGGGAGAAAGGAGA+AGG | + | chr4.4:21351430-21351449 | MS.gene053575:intron | 45.0% | |
| CCAACTCAAAAGAGAGGGTT+CGG | - | chr4.4:21352183-21352202 | None:intergenic | 45.0% | |
| CCACAAAGTGAGCAGTTGTT+GGG | - | chr4.4:21352574-21352593 | None:intergenic | 45.0% | |
| CGGAATCTATGAGCTTGGAT+TGG | + | chr4.4:21352361-21352380 | MS.gene053575:intron | 45.0% | |
| CTTGAGAGAGATGTGAACCA+TGG | + | chr4.4:21352905-21352924 | MS.gene053575:CDS | 45.0% | |
| GAATTTGCAGAACCTGCTGA+TGG | + | chr4.4:21352818-21352837 | MS.gene053575:CDS | 45.0% | |
| GAGCCAATTATTGATGCTGC+TGG | + | chr4.4:21352623-21352642 | MS.gene053575:CDS | 45.0% | |
| GATGGAGGAAATTAACGGAG+GGG | + | chr4.4:21351842-21351861 | MS.gene053575:intron | 45.0% | |
| GATGGAGGAAATTAACGGAG+GGG | - | chr4.4:21351861-21351842 | None:intergenic | 45.0% | |
| GCCACAAATAGAACCATCGT+TGG | - | chr4.4:21349761-21349780 | None:intergenic | 45.0% | |
| GGATGGAGGAAATTAACGGA+GGG | + | chr4.4:21351841-21351860 | MS.gene053575:intron | 45.0% | |
| GGATGGAGGAAATTAACGGA+GGG | - | chr4.4:21351860-21351841 | None:intergenic | 45.0% | |
| GTGAACTCAGTGAACCTATG+TGG | + | chr4.4:21353270-21353289 | MS.gene053575:CDS | 45.0% | |
| GTTTAGATCCTTCCTTAGGG+TGG | + | chr4.4:21351501-21351520 | MS.gene053575:intron | 45.0% | |
| TAACTGCCACATCAGCATGT+TGG | + | chr4.4:21351820-21351839 | MS.gene053575:intron | 45.0% | |
| TAACTGCCACATCAGCATGT+TGG | - | chr4.4:21351839-21351820 | None:intergenic | 45.0% | |
| TCATTGAAGTCCCCAACTCT+TGG | - | chr4.4:21353089-21353108 | None:intergenic | 45.0% | |
| TCCACAAAGTGAGCAGTTGT+TGG | - | chr4.4:21352575-21352594 | None:intergenic | 45.0% | |
| TCCCGTGTACAAAAGGCAAA+TGG | - | chr4.4:21352785-21352804 | None:intergenic | 45.0% | |
| TCCTGCCAACTCAAAAGAGA+GGG | - | chr4.4:21352188-21352207 | None:intergenic | 45.0% | |
| TGAACCATGGAGAGGTTATG+TGG | + | chr4.4:21352918-21352937 | MS.gene053575:CDS | 45.0% | |
| TGAACCTATGTGGCCAATAG+AGG | + | chr4.4:21353280-21353299 | MS.gene053575:CDS | 45.0% | |
| TGCACGATACGAGTTGTATG+CGG | + | chr4.4:21353749-21353768 | MS.gene053575:CDS | 45.0% | |
| TGGATGGAGGAAATTAACGG+AGG | + | chr4.4:21351840-21351859 | MS.gene053575:intron | 45.0% | |
| TGGATGGAGGAAATTAACGG+AGG | - | chr4.4:21351859-21351840 | None:intergenic | 45.0% | |
| TGTTCCACATAACCTCTCCA+TGG | - | chr4.4:21352925-21352944 | None:intergenic | 45.0% | |
| TTGATTGTGTGGCAGGTTTC+GGG | - | chr4.4:21351639-21351658 | None:intergenic | 45.0% | |
| TTGCTTACCGGGCTTAATTG+TGG | + | chr4.4:21350109-21350128 | MS.gene053575:CDS | 45.0% | |
| TTGCTTCAATCAACCGGGTT+GGG | + | chr4.4:21353520-21353539 | MS.gene053575:CDS | 45.0% | |
| TTTGTACACGGGAGAAAAGG+TGG | + | chr4.4:21352792-21352811 | MS.gene053575:CDS | 45.0% | |
| ! | AAACCAGCACACGCAGATTT+TGG | + | chr4.4:21353582-21353601 | MS.gene053575:CDS | 45.0% |
| ! | AAGAGAACCTCGAGTTGTGA+GGG | + | chr4.4:21352520-21352539 | MS.gene053575:CDS | 45.0% |
| ! | CCTTTTCTCCCGTGTACAAA+AGG | - | chr4.4:21352792-21352811 | None:intergenic | 45.0% |
| ! | CCTTTTGTACACGGGAGAAA+AGG | + | chr4.4:21352789-21352808 | MS.gene053575:CDS | 45.0% |
| ! | CTATGTGAGTATCGTGTTGC+AGG | + | chr4.4:21350075-21350094 | MS.gene053575:intron | 45.0% |
| ! | GCCATTTGCCTTTTGTACAC+GGG | + | chr4.4:21352781-21352800 | MS.gene053575:CDS | 45.0% |
| ! | TAAGAGAACCTCGAGTTGTG+AGG | + | chr4.4:21352519-21352538 | MS.gene053575:CDS | 45.0% |
| !! | ATGCTAGTTCTGTTTGTGGC+TGG | - | chr4.4:21350923-21350942 | None:intergenic | 45.0% |
| !! | ATTGATGCTGCTGGTTCATC+GGG | + | chr4.4:21352632-21352651 | MS.gene053575:CDS | 45.0% |
| !! | TGCAATTTCAGGGGGGTATT+TGG | - | chr4.4:21350279-21350298 | None:intergenic | 45.0% |
| !! | TTCGATTTGGACAGAAGAGG+GGG | - | chr4.4:21351305-21351324 | None:intergenic | 45.0% |
| !!! | CAAACATGGTTTTGATGCCC+AGG | + | chr4.4:21350183-21350202 | MS.gene053575:CDS | 45.0% |
| AAACCAACCCTCACAACTCG+AGG | - | chr4.4:21352530-21352549 | None:intergenic | 50.0% | |
| AATACCCCCCCGAAATTGCA+AGG | - | chr4.4:21351942-21351961 | None:intergenic | 50.0% | |
| CACATCAGCATGTTGGATGG+AGG | + | chr4.4:21351827-21351846 | MS.gene053575:intron | 50.0% | |
| CACATCAGCATGTTGGATGG+AGG | - | chr4.4:21351846-21351827 | None:intergenic | 50.0% | |
| CACTGCCACATGGTCAGAAA+AGG | + | chr4.4:21350434-21350453 | MS.gene053575:intron | 50.0% | |
| CACTGCCACATGGTCAGAAA+AGG | - | chr4.4:21350453-21350434 | None:intergenic | 50.0% | |
| CCCAACAACTGCTCACTTTG+TGG | + | chr4.4:21352571-21352590 | MS.gene053575:CDS | 50.0% | |
| CGAACCTCTATTGGCCACAT+AGG | - | chr4.4:21353287-21353306 | None:intergenic | 50.0% | |
| CTCCATCCAACATGCTGATG+TGG | + | chr4.4:21350392-21350411 | MS.gene053575:intron | 50.0% | |
| CTCCATCCAACATGCTGATG+TGG | - | chr4.4:21350411-21350392 | None:intergenic | 50.0% | |
| GAGAGAGCTGTAGCAGATTC+TGG | - | chr4.4:21350160-21350179 | None:intergenic | 50.0% | |
| GAGAGATGTGAACCATGGAG+AGG | + | chr4.4:21352910-21352929 | MS.gene053575:CDS | 50.0% | |
| GAGTTGGCAGGACCGAAATA+TGG | + | chr4.4:21352196-21352215 | MS.gene053575:intron | 50.0% | |
| GCCGTCGTAATTGGGAATCA+CGG | + | chr4.4:21352947-21352966 | MS.gene053575:CDS | 50.0% | |
| GCCGTGATTCCCAATTACGA+CGG | - | chr4.4:21352951-21352970 | None:intergenic | 50.0% | |
| GGAACACTGCCGTCGTAATT+GGG | + | chr4.4:21352939-21352958 | MS.gene053575:CDS | 50.0% | |
| GTCCTGCCAACTCAAAAGAG+AGG | - | chr4.4:21352189-21352208 | None:intergenic | 50.0% | |
| GTTGCTTCAATCAACCGGGT+TGG | + | chr4.4:21353519-21353538 | MS.gene053575:CDS | 50.0% | |
| TGACCAAAATCTGCGTGTGC+TGG | - | chr4.4:21353588-21353607 | None:intergenic | 50.0% | |
| TGACGCGCCTTGCAATTTCA+GGG | - | chr4.4:21350289-21350308 | None:intergenic | 50.0% | |
| TGATTGTGTGGCAGGTTTCG+GGG | - | chr4.4:21351638-21351657 | None:intergenic | 50.0% | |
| TGCCACATCAGCATGTTGGA+TGG | + | chr4.4:21351824-21351843 | MS.gene053575:intron | 50.0% | |
| TGCCACATCAGCATGTTGGA+TGG | - | chr4.4:21351843-21351824 | None:intergenic | 50.0% | |
| TGGAACACTGCCGTCGTAAT+TGG | + | chr4.4:21352938-21352957 | MS.gene053575:CDS | 50.0% | |
| TGGAGGAAATTAACGGAGGG+GGG | + | chr4.4:21351844-21351863 | MS.gene053575:intron | 50.0% | |
| TGGAGGAAATTAACGGAGGG+GGG | - | chr4.4:21351863-21351844 | None:intergenic | 50.0% | |
| TTCACTGAGTTCACCAACGG+TGG | - | chr4.4:21353264-21353283 | None:intergenic | 50.0% | |
| TTGACGCGCCTTGCAATTTC+AGG | - | chr4.4:21351950-21351931 | None:intergenic | 50.0% | |
| TTGACGCGCCTTGCAATTTC+GGG | + | chr4.4:21351931-21351950 | MS.gene053575:intron | 50.0% | |
| ! | AAAAGGCATGCCACGTCAGA+GGG | + | chr4.4:21350451-21350470 | MS.gene053575:intron | 50.0% |
| ! | AAAAGGCATGCCACGTCAGA+GGG | - | chr4.4:21350470-21350451 | None:intergenic | 50.0% |
| ! | GCATGCCTTTTCTGACCATG+TGG | + | chr4.4:21351779-21351798 | MS.gene053575:intron | 50.0% |
| ! | GCATGCCTTTTCTGACCATG+TGG | - | chr4.4:21351798-21351779 | None:intergenic | 50.0% |
| ! | GGGGTATTTGATTGTGTGGC+AGG | - | chr4.4:21351598-21351617 | None:intergenic | 50.0% |
| ! | TGGTGGCGTGTTTCTGCTAT+GGG | - | chr4.4:21350903-21350922 | None:intergenic | 50.0% |
| !! | CAGGGGGGTATTTGATTGTG+TGG | - | chr4.4:21351602-21351621 | None:intergenic | 50.0% |
| !! | CCGAACCCTCTCTTTTGAGT+TGG | + | chr4.4:21352180-21352199 | MS.gene053575:intron | 50.0% |
| !! | CTAGTTCTGTTTGTGGCTGG+TGG | - | chr4.4:21350920-21350939 | None:intergenic | 50.0% |
| !! | TGCAATTTCGGGGGGGTATT+TGG | + | chr4.4:21351942-21351961 | MS.gene053575:intron | 50.0% |
| !! | TTGATGCTGCTGGTTCATCG+GGG | + | chr4.4:21352633-21352652 | MS.gene053575:CDS | 50.0% |
| !!! | ACCCTCTCTTTTGAGTTGGC+AGG | + | chr4.4:21352184-21352203 | MS.gene053575:intron | 50.0% |
| AAGGGGTCACGGATGACTTG+AGG | - | chr4.4:21353810-21353829 | None:intergenic | 55.0% | |
| ACGCGCCTTGCAATTTCAGG+GGG | - | chr4.4:21350287-21350306 | None:intergenic | 55.0% | |
| ATTGTGTGGCAGGTTTCGGG+GGG | - | chr4.4:21351636-21351655 | None:intergenic | 55.0% | |
| GACGCGCCTTGCAATTTCAG+GGG | - | chr4.4:21350288-21350307 | None:intergenic | 55.0% | |
| GATGGTGTGCAGGATGCATC+TGG | - | chr4.4:21353639-21353658 | None:intergenic | 55.0% | |
| GATTGTGTGGCAGGTTTCGG+GGG | - | chr4.4:21351637-21351656 | None:intergenic | 55.0% | |
| GGAATGTCTCAGTCCCAACC+CGG | - | chr4.4:21353536-21353555 | None:intergenic | 55.0% | |
| TCAATTACCCCCCTCTGACG+TGG | + | chr4.4:21351757-21351776 | MS.gene053575:intron | 55.0% | |
| TCAATTACCCCCCTCTGACG+TGG | - | chr4.4:21351776-21351757 | None:intergenic | 55.0% | |
| TGACGCGCCTTGCAATTTCG+GGG | + | chr4.4:21351932-21351951 | MS.gene053575:intron | 55.0% | |
| ! | AAAGGCATGCCACGTCAGAG+GGG | + | chr4.4:21350452-21350471 | MS.gene053575:intron | 55.0% |
| ! | AAAGGCATGCCACGTCAGAG+GGG | - | chr4.4:21350471-21350452 | None:intergenic | 55.0% |
| ! | CTGGTGGCGTGTTTCTGCTA+TGG | - | chr4.4:21350904-21350923 | None:intergenic | 55.0% |
| ! | GAAAAGGCATGCCACGTCAG+AGG | + | chr4.4:21350450-21350469 | MS.gene053575:intron | 55.0% |
| ! | GAAAAGGCATGCCACGTCAG+AGG | - | chr4.4:21350469-21350450 | None:intergenic | 55.0% |
| ! | GAACCTCGAGTTGTGAGGGT+TGG | + | chr4.4:21352524-21352543 | MS.gene053575:CDS | 55.0% |
| !! | GGCAGGGGCTTTTGATTGTG+TGG | - | chr4.4:21351650-21351669 | None:intergenic | 55.0% |
| !! | GGGGCTTTTGATTGTGTGGC+AGG | - | chr4.4:21351646-21351665 | None:intergenic | 55.0% |
| !! | TGATGCTGCTGGTTCATCGG+GGG | + | chr4.4:21352634-21352653 | MS.gene053575:CDS | 55.0% |
| AAGGCATGCCACGTCAGAGG+GGG | + | chr4.4:21350453-21350472 | MS.gene053575:intron | 60.0% | |
| AAGGCATGCCACGTCAGAGG+GGG | - | chr4.4:21350472-21350453 | None:intergenic | 60.0% | |
| ACCATGTGGCAGTGCCACGT+GGG | + | chr4.4:21351793-21351812 | MS.gene053575:intron | 60.0% | |
| ACCATGTGGCAGTGCCACGT+GGG | - | chr4.4:21351812-21351793 | None:intergenic | 60.0% | |
| ACGCGCCTTGCAATTTCGGG+GGG | + | chr4.4:21351934-21351953 | MS.gene053575:intron | 60.0% | |
| AGTTCACCAACGGTGGCAGC+AGG | - | chr4.4:21353257-21353276 | None:intergenic | 60.0% | |
| CGCGCCTTGCAATTTCAGGG+GGG | - | chr4.4:21350286-21350305 | None:intergenic | 60.0% | |
| GACGCGCCTTGCAATTTCGG+GGG | + | chr4.4:21351933-21351952 | MS.gene053575:intron | 60.0% | |
| GCTATGGGCCTGCAGTGTCT+GGG | - | chr4.4:21350888-21350907 | None:intergenic | 60.0% | |
| GTGGCAGTTAACTGCCCACG+TGG | + | chr4.4:21350411-21350430 | MS.gene053575:intron | 60.0% | |
| GTGGCAGTTAACTGCCCACG+TGG | - | chr4.4:21350430-21350411 | None:intergenic | 60.0% | |
| GTTCACCAACGGTGGCAGCA+GGG | - | chr4.4:21353256-21353275 | None:intergenic | 60.0% | |
| TCTGGGTGCCTGCAGTGTCT+GGG | - | chr4.4:21350854-21350873 | None:intergenic | 60.0% | |
| TGCTATGGGCCTGCAGTGTC+TGG | - | chr4.4:21350889-21350908 | None:intergenic | 60.0% | |
| TTCAACCCTGCTGCCACCGT+TGG | + | chr4.4:21353248-21353267 | MS.gene053575:CDS | 60.0% | |
| TTGTGTGGCAGGTTTCGGGG+GGG | - | chr4.4:21351635-21351654 | None:intergenic | 60.0% | |
| ! | GCAGGTTTCGGGGGGGTTTT+TGG | - | chr4.4:21351628-21351647 | None:intergenic | 60.0% |
| !!! | CGGGGGGGTTTTTGGCTACA+GGG | - | chr4.4:21351620-21351639 | None:intergenic | 60.0% |
| !!! | GGGGGGGTTTTTGGCTACAG+GGG | - | chr4.4:21351619-21351638 | None:intergenic | 60.0% |
| !!! | GGGGGGTTTTTGGCTACAGG+GGG | - | chr4.4:21351618-21351637 | None:intergenic | 60.0% |
| !!! | GGGGGTTTTTGGCTACAGGG+GGG | - | chr4.4:21351617-21351636 | None:intergenic | 60.0% |
| !!! | TCGGGGGGGTTTTTGGCTAC+AGG | - | chr4.4:21351621-21351640 | None:intergenic | 60.0% |
| AGGCATGCCACGTCAGAGGG+GGG | + | chr4.4:21350454-21350473 | MS.gene053575:intron | 65.0% | |
| AGGCATGCCACGTCAGAGGG+GGG | - | chr4.4:21350473-21350454 | None:intergenic | 65.0% | |
| CGCGCCTTGCAATTTCGGGG+GGG | + | chr4.4:21351935-21351954 | MS.gene053575:intron | 65.0% | |
| GACCATGTGGCAGTGCCACG+TGG | + | chr4.4:21351792-21351811 | MS.gene053575:intron | 65.0% | |
| GACCATGTGGCAGTGCCACG+TGG | - | chr4.4:21351811-21351792 | None:intergenic | 65.0% | |
| GTCTGGGTGCCTGCAGTGTC+TGG | - | chr4.4:21350855-21350874 | None:intergenic | 65.0% | |
| TGCAGGCACCCAGACACTGC+AGG | + | chr4.4:21350860-21350879 | MS.gene053575:intron | 65.0% | |
| GCCCACGTGGCACTGCCACA+TGG | + | chr4.4:21350424-21350443 | MS.gene053575:intron | 70.0% | |
| GCCCACGTGGCACTGCCACA+TGG | - | chr4.4:21350443-21350424 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 21349712 | 21353848 | 21349712 | ID=MS.gene053575 |
| chr4.4 | mRNA | 21349712 | 21353848 | 21349712 | ID=MS.gene053575.t1;Parent=MS.gene053575 |
| chr4.4 | exon | 21349712 | 21349834 | 21349712 | ID=MS.gene053575.t1.exon1;Parent=MS.gene053575.t1 |
| chr4.4 | CDS | 21349712 | 21349834 | 21349712 | ID=cds.MS.gene053575.t1;Parent=MS.gene053575.t1 |
| chr4.4 | exon | 21350097 | 21350204 | 21350097 | ID=MS.gene053575.t1.exon2;Parent=MS.gene053575.t1 |
| chr4.4 | CDS | 21350097 | 21350204 | 21350097 | ID=cds.MS.gene053575.t1;Parent=MS.gene053575.t1 |
| chr4.4 | exon | 21352488 | 21352676 | 21352488 | ID=MS.gene053575.t1.exon3;Parent=MS.gene053575.t1 |
| chr4.4 | CDS | 21352488 | 21352676 | 21352488 | ID=cds.MS.gene053575.t1;Parent=MS.gene053575.t1 |
| chr4.4 | exon | 21352767 | 21352994 | 21352767 | ID=MS.gene053575.t1.exon4;Parent=MS.gene053575.t1 |
| chr4.4 | CDS | 21352767 | 21352994 | 21352767 | ID=cds.MS.gene053575.t1;Parent=MS.gene053575.t1 |
| chr4.4 | exon | 21353077 | 21353301 | 21353077 | ID=MS.gene053575.t1.exon5;Parent=MS.gene053575.t1 |
| chr4.4 | CDS | 21353077 | 21353301 | 21353077 | ID=cds.MS.gene053575.t1;Parent=MS.gene053575.t1 |
| chr4.4 | exon | 21353486 | 21353848 | 21353486 | ID=MS.gene053575.t1.exon6;Parent=MS.gene053575.t1 |
| chr4.4 | CDS | 21353486 | 21353848 | 21353486 | ID=cds.MS.gene053575.t1;Parent=MS.gene053575.t1 |
| Gene Sequence |
| Protein sequence |
