Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69393.t1 | RHN71119.1 | 97.4 | 305 | 7 | 1 | 2 | 305 | 22 | 326 | 2.10E-170 | 608.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69393.t1 | A0A1P8B554 | 61.6 | 237 | 77 | 5 | 1 | 230 | 28 | 257 | 3.7e-75 | 283.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69393.t1 | A0A396IZC8 | 97.4 | 305 | 7 | 1 | 2 | 305 | 22 | 326 | 1.5e-170 | 608.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034371 | MS.gene69393 | PPI |
MS.gene27083 | MS.gene69393 | PPI |
MS.gene42251 | MS.gene69393 | PPI |
MS.gene24137 | MS.gene69393 | PPI |
MS.gene35517 | MS.gene69393 | PPI |
MS.gene64022 | MS.gene69393 | PPI |
MS.gene014413 | MS.gene69393 | PPI |
MS.gene064765 | MS.gene69393 | PPI |
MS.gene64224 | MS.gene69393 | PPI |
MS.gene059292 | MS.gene69393 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69393.t1 | MTR_3g114030 | 98.718 | 234 | 3 | 0 | 2 | 235 | 3 | 236 | 8.72e-169 | 468 |
MS.gene69393.t1 | MTR_1g025420 | 75.649 | 308 | 66 | 5 | 2 | 303 | 19 | 323 | 1.95e-165 | 462 |
MS.gene69393.t1 | MTR_1g025420 | 83.843 | 229 | 37 | 0 | 2 | 230 | 19 | 247 | 2.62e-142 | 402 |
MS.gene69393.t1 | MTR_5g022310 | 70.968 | 248 | 67 | 4 | 1 | 245 | 21 | 266 | 2.84e-118 | 342 |
MS.gene69393.t1 | MTR_5g022310 | 73.593 | 231 | 57 | 3 | 1 | 228 | 21 | 250 | 4.19e-117 | 337 |
MS.gene69393.t1 | MTR_8g037890 | 70.886 | 237 | 64 | 4 | 5 | 239 | 25 | 258 | 1.23e-114 | 333 |
MS.gene69393.t1 | MTR_8g075550 | 68.675 | 249 | 70 | 4 | 2 | 245 | 24 | 269 | 1.06e-113 | 331 |
MS.gene69393.t1 | MTR_8g056820 | 69.737 | 228 | 65 | 3 | 2 | 228 | 22 | 246 | 4.69e-110 | 320 |
MS.gene69393.t1 | MTR_4g073730 | 64.317 | 227 | 79 | 2 | 3 | 228 | 22 | 247 | 8.91e-103 | 302 |
MS.gene69393.t1 | MTR_4g073730 | 64.317 | 227 | 79 | 2 | 3 | 228 | 22 | 247 | 2.38e-102 | 303 |
MS.gene69393.t1 | MTR_4g073720 | 56.667 | 270 | 109 | 5 | 2 | 271 | 21 | 282 | 3.12e-93 | 280 |
MS.gene69393.t1 | MTR_8g075510 | 59.130 | 230 | 84 | 4 | 3 | 232 | 28 | 247 | 4.00e-88 | 264 |
MS.gene69393.t1 | MTR_8g075510 | 60.177 | 226 | 80 | 5 | 3 | 228 | 28 | 243 | 1.63e-87 | 264 |
MS.gene69393.t1 | MTR_7g102380 | 55.652 | 230 | 99 | 3 | 2 | 231 | 17 | 243 | 1.85e-86 | 259 |
MS.gene69393.t1 | MTR_5g022350 | 54.864 | 257 | 105 | 5 | 3 | 259 | 28 | 273 | 5.66e-86 | 261 |
MS.gene69393.t1 | MTR_2g068655 | 56.140 | 228 | 96 | 3 | 2 | 228 | 27 | 251 | 3.94e-84 | 256 |
MS.gene69393.t1 | MTR_2g068030 | 53.419 | 234 | 103 | 5 | 3 | 234 | 20 | 249 | 1.26e-83 | 252 |
MS.gene69393.t1 | MTR_2g067980 | 54.918 | 244 | 102 | 5 | 3 | 242 | 21 | 260 | 4.05e-82 | 268 |
MS.gene69393.t1 | MTR_1g062590 | 54.955 | 222 | 97 | 3 | 7 | 228 | 23 | 241 | 2.21e-79 | 241 |
MS.gene69393.t1 | MTR_8g036215 | 54.825 | 228 | 98 | 5 | 1 | 228 | 15 | 237 | 2.96e-79 | 241 |
MS.gene69393.t1 | MTR_2g069660 | 51.542 | 227 | 108 | 2 | 2 | 228 | 18 | 242 | 2.56e-77 | 236 |
MS.gene69393.t1 | MTR_1g021945 | 56.195 | 226 | 91 | 6 | 5 | 228 | 25 | 244 | 4.59e-77 | 236 |
MS.gene69393.t1 | MTR_1g062340 | 54.505 | 222 | 98 | 3 | 9 | 230 | 25 | 243 | 8.28e-77 | 234 |
MS.gene69393.t1 | MTR_1g062660 | 55.405 | 222 | 96 | 3 | 9 | 230 | 25 | 243 | 9.96e-77 | 234 |
MS.gene69393.t1 | MTR_1g062350 | 55.405 | 222 | 96 | 3 | 9 | 230 | 25 | 243 | 1.24e-76 | 234 |
MS.gene69393.t1 | MTR_1g062370 | 54.955 | 222 | 97 | 3 | 9 | 230 | 25 | 243 | 1.41e-76 | 234 |
MS.gene69393.t1 | MTR_1g062630 | 53.571 | 224 | 101 | 3 | 9 | 232 | 25 | 245 | 2.09e-76 | 234 |
MS.gene69393.t1 | MTR_6g079580 | 52.655 | 226 | 102 | 4 | 3 | 228 | 19 | 239 | 5.69e-75 | 230 |
MS.gene69393.t1 | MTR_3g111620 | 54.911 | 224 | 95 | 6 | 6 | 228 | 27 | 245 | 3.87e-73 | 226 |
MS.gene69393.t1 | MTR_8g107140 | 52.511 | 219 | 99 | 4 | 10 | 228 | 31 | 244 | 1.85e-71 | 221 |
MS.gene69393.t1 | MTR_6g009480 | 48.444 | 225 | 110 | 6 | 7 | 228 | 30 | 251 | 4.38e-63 | 201 |
MS.gene69393.t1 | MTR_3g068015 | 49.333 | 225 | 107 | 7 | 6 | 228 | 28 | 247 | 1.00e-62 | 199 |
MS.gene69393.t1 | MTR_5g059200 | 48.889 | 225 | 103 | 8 | 5 | 229 | 28 | 240 | 4.44e-62 | 198 |
MS.gene69393.t1 | MTR_7g062610 | 49.550 | 222 | 106 | 6 | 8 | 228 | 25 | 241 | 6.94e-61 | 194 |
MS.gene69393.t1 | MTR_1g062690 | 49.099 | 222 | 86 | 4 | 9 | 230 | 25 | 219 | 8.79e-61 | 193 |
MS.gene69393.t1 | MTR_4g063630 | 44.248 | 226 | 118 | 7 | 8 | 229 | 31 | 252 | 2.28e-58 | 188 |
MS.gene69393.t1 | MTR_2g067990 | 46.281 | 242 | 100 | 8 | 2 | 242 | 23 | 235 | 6.04e-55 | 192 |
MS.gene69393.t1 | MTR_5g023850 | 52.381 | 168 | 75 | 3 | 2 | 166 | 22 | 187 | 1.21e-51 | 169 |
MS.gene69393.t1 | MTR_5g010640 | 42.358 | 229 | 103 | 8 | 8 | 228 | 28 | 235 | 5.21e-47 | 158 |
MS.gene69393.t1 | MTR_2g067970 | 45.455 | 198 | 99 | 7 | 49 | 242 | 3 | 195 | 6.88e-47 | 169 |
MS.gene69393.t1 | MTR_5g010635 | 39.556 | 225 | 112 | 7 | 5 | 228 | 23 | 224 | 1.10e-45 | 155 |
MS.gene69393.t1 | MTR_8g096900 | 39.823 | 226 | 109 | 8 | 5 | 228 | 47 | 247 | 5.25e-43 | 148 |
MS.gene69393.t1 | MTR_5g022350 | 58.015 | 131 | 49 | 3 | 2 | 130 | 90 | 216 | 2.01e-42 | 146 |
MS.gene69393.t1 | MTR_8g089020 | 51.538 | 130 | 57 | 3 | 91 | 220 | 33 | 156 | 6.06e-37 | 129 |
MS.gene69393.t1 | MTR_2g063150 | 33.028 | 218 | 138 | 5 | 6 | 222 | 34 | 244 | 2.03e-36 | 131 |
MS.gene69393.t1 | MTR_7g076360 | 37.383 | 214 | 69 | 4 | 5 | 218 | 7 | 155 | 4.52e-36 | 127 |
MS.gene69393.t1 | MTR_3g114040 | 78.571 | 84 | 17 | 1 | 223 | 305 | 20 | 103 | 2.01e-35 | 124 |
MS.gene69393.t1 | MTR_3g081550 | 62.766 | 94 | 35 | 0 | 91 | 184 | 16 | 109 | 1.39e-34 | 122 |
MS.gene69393.t1 | MTR_1g062390 | 31.224 | 237 | 135 | 8 | 2 | 228 | 19 | 237 | 2.11e-28 | 110 |
MS.gene69393.t1 | MTR_8g096910 | 44.915 | 118 | 55 | 4 | 5 | 121 | 21 | 129 | 1.38e-24 | 98.2 |
MS.gene69393.t1 | MTR_8g096920 | 43.220 | 118 | 57 | 4 | 5 | 121 | 18 | 126 | 5.65e-20 | 85.5 |
MS.gene69393.t1 | MTR_1g062640 | 42.708 | 96 | 53 | 2 | 52 | 147 | 53 | 146 | 4.11e-15 | 72.0 |
MS.gene69393.t1 | MTR_5g068670 | 48.529 | 68 | 33 | 2 | 57 | 124 | 25 | 90 | 4.39e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69393.t1 | AT1G20030 | 64.379 | 306 | 101 | 4 | 2 | 305 | 16 | 315 | 2.49e-133 | 381 |
MS.gene69393.t1 | AT1G75800 | 61.905 | 315 | 104 | 4 | 2 | 303 | 19 | 330 | 1.60e-132 | 379 |
MS.gene69393.t1 | AT1G20030 | 64.145 | 304 | 101 | 4 | 4 | 305 | 1 | 298 | 3.29e-132 | 377 |
MS.gene69393.t1 | AT4G36010 | 63.433 | 268 | 83 | 7 | 2 | 258 | 19 | 282 | 9.56e-111 | 323 |
MS.gene69393.t1 | AT4G36010 | 63.433 | 268 | 83 | 7 | 2 | 258 | 19 | 282 | 9.56e-111 | 323 |
MS.gene69393.t1 | AT4G38670 | 57.519 | 266 | 102 | 4 | 3 | 267 | 20 | 275 | 1.34e-103 | 304 |
MS.gene69393.t1 | AT4G38670 | 57.519 | 266 | 102 | 4 | 3 | 267 | 20 | 275 | 1.34e-103 | 304 |
MS.gene69393.t1 | AT4G38670 | 57.519 | 266 | 102 | 4 | 3 | 267 | 4 | 259 | 1.96e-103 | 303 |
MS.gene69393.t1 | AT2G17860 | 65.652 | 230 | 74 | 4 | 5 | 230 | 22 | 250 | 9.12e-103 | 301 |
MS.gene69393.t1 | AT4G38660 | 59.524 | 252 | 91 | 5 | 2 | 253 | 26 | 266 | 2.28e-93 | 280 |
MS.gene69393.t1 | AT4G38660 | 59.524 | 252 | 91 | 5 | 2 | 253 | 4 | 244 | 2.92e-93 | 280 |
MS.gene69393.t1 | AT4G24180 | 58.621 | 261 | 93 | 5 | 1 | 255 | 28 | 279 | 4.92e-92 | 276 |
MS.gene69393.t1 | AT4G24180 | 59.608 | 255 | 88 | 5 | 7 | 255 | 29 | 274 | 5.50e-92 | 276 |
MS.gene69393.t1 | AT4G24180 | 61.017 | 236 | 80 | 4 | 1 | 230 | 28 | 257 | 6.88e-91 | 271 |
MS.gene69393.t1 | AT4G24180 | 62.174 | 230 | 75 | 4 | 7 | 230 | 29 | 252 | 9.41e-91 | 271 |
MS.gene69393.t1 | AT5G38280 | 54.545 | 242 | 108 | 2 | 2 | 241 | 21 | 262 | 1.70e-89 | 280 |
MS.gene69393.t1 | AT5G38280 | 54.545 | 242 | 108 | 2 | 2 | 241 | 21 | 262 | 3.70e-89 | 280 |
MS.gene69393.t1 | AT4G24180 | 61.033 | 213 | 72 | 3 | 7 | 213 | 34 | 241 | 5.06e-83 | 253 |
MS.gene69393.t1 | AT4G24180 | 61.033 | 213 | 72 | 3 | 7 | 213 | 29 | 236 | 6.76e-83 | 253 |
MS.gene69393.t1 | AT5G24620 | 51.538 | 260 | 109 | 6 | 5 | 259 | 24 | 271 | 1.64e-80 | 250 |
MS.gene69393.t1 | AT5G24620 | 51.538 | 260 | 109 | 6 | 5 | 259 | 79 | 326 | 3.30e-80 | 251 |
MS.gene69393.t1 | AT5G24620 | 51.538 | 260 | 109 | 6 | 5 | 259 | 100 | 347 | 5.40e-80 | 251 |
MS.gene69393.t1 | AT1G19320 | 56.223 | 233 | 92 | 6 | 1 | 229 | 21 | 247 | 2.24e-79 | 241 |
MS.gene69393.t1 | AT1G75040 | 57.018 | 228 | 90 | 6 | 1 | 228 | 19 | 238 | 1.52e-78 | 239 |
MS.gene69393.t1 | AT1G75050 | 55.263 | 228 | 97 | 5 | 5 | 232 | 24 | 246 | 1.38e-77 | 237 |
MS.gene69393.t1 | AT1G18250 | 51.528 | 229 | 106 | 4 | 5 | 233 | 21 | 244 | 3.69e-75 | 231 |
MS.gene69393.t1 | AT1G18250 | 51.528 | 229 | 106 | 4 | 5 | 233 | 20 | 243 | 4.11e-75 | 230 |
MS.gene69393.t1 | AT1G75030 | 53.778 | 225 | 98 | 6 | 5 | 228 | 23 | 242 | 4.20e-75 | 230 |
MS.gene69393.t1 | AT1G73620 | 52.232 | 224 | 102 | 4 | 5 | 228 | 41 | 259 | 6.45e-74 | 228 |
MS.gene69393.t1 | AT1G77700 | 50.435 | 230 | 94 | 9 | 5 | 230 | 60 | 273 | 7.54e-67 | 212 |
MS.gene69393.t1 | AT2G28790 | 49.554 | 224 | 106 | 6 | 8 | 228 | 29 | 248 | 1.58e-66 | 209 |
MS.gene69393.t1 | AT2G28790 | 49.333 | 225 | 107 | 6 | 8 | 229 | 54 | 274 | 1.63e-66 | 209 |
MS.gene69393.t1 | AT1G77700 | 49.785 | 233 | 97 | 9 | 5 | 233 | 60 | 276 | 1.95e-66 | 211 |
MS.gene69393.t1 | AT1G77700 | 50.435 | 230 | 94 | 9 | 5 | 230 | 88 | 301 | 2.06e-66 | 212 |
MS.gene69393.t1 | AT4G36000 | 52.889 | 225 | 81 | 8 | 82 | 303 | 1 | 203 | 7.52e-63 | 198 |
MS.gene69393.t1 | AT4G36000 | 52.889 | 225 | 81 | 8 | 82 | 303 | 1 | 203 | 7.52e-63 | 198 |
MS.gene69393.t1 | AT5G40020 | 46.696 | 227 | 116 | 5 | 5 | 230 | 27 | 249 | 5.84e-61 | 194 |
MS.gene69393.t1 | AT1G70250 | 44.351 | 239 | 120 | 6 | 4 | 236 | 143 | 374 | 1.34e-60 | 206 |
MS.gene69393.t1 | AT4G18253 | 43.478 | 230 | 120 | 4 | 2 | 230 | 19 | 239 | 1.99e-58 | 187 |
MS.gene69393.t1 | AT5G02140 | 46.396 | 222 | 114 | 5 | 8 | 228 | 23 | 240 | 2.29e-58 | 187 |
MS.gene69393.t1 | AT5G02140 | 46.396 | 222 | 114 | 5 | 8 | 228 | 23 | 240 | 2.77e-58 | 189 |
MS.gene69393.t1 | AT4G18250 | 42.164 | 268 | 145 | 6 | 2 | 267 | 52 | 311 | 2.00e-57 | 196 |
MS.gene69393.t1 | AT4G11650 | 41.778 | 225 | 106 | 8 | 5 | 228 | 22 | 222 | 7.31e-46 | 155 |
MS.gene69393.t1 | AT5G24620 | 49.682 | 157 | 64 | 4 | 113 | 265 | 15 | 160 | 2.28e-39 | 140 |
MS.gene69393.t1 | AT2G24810 | 58.025 | 81 | 31 | 2 | 149 | 229 | 116 | 193 | 5.25e-23 | 94.4 |
Find 98 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTCCTGGGGAGGCCGTTTC+TGG | -0.052359 | 3.3:+93291227 | MS.gene69393:CDS |
CAATCACCCCACCCGCTTCC+TGG | 0.293774 | 3.3:+93291212 | MS.gene69393:CDS |
CGGTGGTGTTGCGCCGTTCC+CGG | 0.299087 | 3.3:-93291332 | None:intergenic |
GTACGAATACCGGTTGTATC+AGG | 0.300485 | 3.3:+93291476 | MS.gene69393:CDS |
TTCCTGGGGAGGCCGTTTCT+GGG | 0.311657 | 3.3:+93291228 | MS.gene69393:CDS |
AGCGGGTGGGGTGATTGATT+TGG | 0.328396 | 3.3:-93291206 | None:intergenic |
GAGTCACTGCCATCTGATTT+CGG | 0.335928 | 3.3:-93292971 | None:intergenic |
CCCGGAGCATTCGACTTTGC+CGG | 0.336054 | 3.3:-93291314 | None:intergenic |
CCGGCGTTGGAGAGAATTCC+CGG | 0.381681 | 3.3:-93291136 | None:intergenic |
TCACCTTGGGCTGTTGTTAG+TGG | 0.384731 | 3.3:-93291767 | None:intergenic |
TTGTGATGGTAAGAATAGTT+TGG | 0.385951 | 3.3:-93293096 | None:intergenic |
GGAAAATTCTCATGTCTTAC+CGG | 0.390131 | 3.3:+93291280 | MS.gene69393:CDS |
TGTGATGGTAAGAATAGTTT+GGG | 0.391149 | 3.3:-93293095 | None:intergenic |
GCCTCCCCAGGAAGCGGGTG+GGG | 0.392476 | 3.3:-93291218 | None:intergenic |
AATCACCCCACCCGCTTCCT+GGG | 0.417844 | 3.3:+93291213 | MS.gene69393:CDS |
CGCGTGTCCTTCAGAGCTTA+AGG | 0.433220 | 3.3:+93291510 | MS.gene69393:CDS |
ACCGGTTTCGTTCTTCAATC+CGG | 0.449618 | 3.3:+93291178 | MS.gene69393:CDS |
TATTGTTGCAGCGGCGCGTA+TGG | 0.455532 | 3.3:+93291601 | MS.gene69393:CDS |
TTGCAGTCAAAAGTCGTGGC+AGG | 0.458754 | 3.3:+93292940 | MS.gene69393:intron |
CTTAAGGTTACGAGCGTGGA+TGG | 0.458977 | 3.3:+93291526 | MS.gene69393:CDS |
GCCCCAGAAACGGCCTCCCC+AGG | 0.462616 | 3.3:-93291230 | None:intergenic |
TTGATCAGAGTGAAATATCA+TGG | 0.466410 | 3.3:+93293047 | MS.gene69393:CDS |
CTCGAAGGTTTACAAGTGTT+AGG | 0.467705 | 3.3:-93291628 | None:intergenic |
AAAAGTGCTTGTGAGGCGTT+TGG | 0.468766 | 3.3:+93291568 | MS.gene69393:CDS |
ATGCAACTACACAGTCTGGC+CGG | 0.486519 | 3.3:+93291117 | MS.gene69393:CDS |
AGAGAGTGCGGCCCCAGAAA+CGG | 0.490637 | 3.3:-93291240 | None:intergenic |
AAGCGGTGCAACGCCGGCGT+TGG | 0.494696 | 3.3:-93291149 | None:intergenic |
TTAGCGGAATTCACTCTTGA+CGG | 0.495810 | 3.3:+93291361 | MS.gene69393:CDS |
AACACCACCGGCTACCTTAG+CGG | 0.497856 | 3.3:+93291345 | MS.gene69393:CDS |
TCCGGCAAAGTCGAATGCTC+CGG | 0.498921 | 3.3:+93291313 | MS.gene69393:CDS |
GGTTGGAAGCGGTGCAACGC+CGG | 0.499056 | 3.3:-93291155 | None:intergenic |
CGGGAACGGCGCAACACCAC+CGG | 0.499852 | 3.3:+93291333 | MS.gene69393:CDS |
ACCCCACCCGCTTCCTGGGG+AGG | 0.502582 | 3.3:+93291217 | MS.gene69393:CDS |
TAACAACGGCTCTGGCTCAA+TGG | 0.504154 | 3.3:+93293009 | MS.gene69393:CDS |
ACAAATGCAACTACACAGTC+TGG | 0.504490 | 3.3:+93291113 | MS.gene69393:CDS |
GTAGTTCCACAAGGTGGCTC+CGG | 0.507977 | 3.3:+93291445 | MS.gene69393:CDS |
GGCTCAATGGTGTACGTTGG+TGG | 0.508308 | 3.3:+93293022 | MS.gene69393:CDS |
GTTGCACCGCTTCCAACCAC+CGG | 0.509906 | 3.3:+93291160 | MS.gene69393:CDS |
CGGCCTCCCCAGGAAGCGGG+TGG | 0.513133 | 3.3:-93291220 | None:intergenic |
GCCGGATTGAAGAACGAAAC+CGG | 0.514473 | 3.3:-93291179 | None:intergenic |
GAAACGGCCTCCCCAGGAAG+CGG | 0.516631 | 3.3:-93291224 | None:intergenic |
CCGGCAAAGTCGAATGCTCC+GGG | 0.517602 | 3.3:+93291314 | MS.gene69393:CDS |
AAACGGCCTCCCCAGGAAGC+GGG | 0.522887 | 3.3:-93291223 | None:intergenic |
GGTGATAACTGTACGAATAC+CGG | 0.523090 | 3.3:+93291466 | MS.gene69393:CDS |
TTCGACGTGAGTTTAGTTGA+CGG | 0.526291 | 3.3:+93291403 | MS.gene69393:CDS |
CCTTGTGGAACTACAAGCAT+TGG | 0.527175 | 3.3:-93291436 | None:intergenic |
GAATTCACTCTTGACGGATC+CGG | 0.528777 | 3.3:+93291367 | MS.gene69393:CDS |
CCTCAGCTTAACAACGGCTC+TGG | 0.530822 | 3.3:+93293001 | MS.gene69393:CDS |
TCCTGGGGAGGCCGTTTCTG+GGG | 0.533325 | 3.3:+93291229 | MS.gene69393:CDS |
TGCAACTACACAGTCTGGCC+GGG | 0.533665 | 3.3:+93291118 | MS.gene69393:CDS |
CCTTGGGCTGTTGTTAGTGG+AGG | 0.540523 | 3.3:-93291764 | None:intergenic |
GAGCAAATCCCTGATACAAC+CGG | 0.543946 | 3.3:-93291485 | None:intergenic |
GTGAATTCCGCTAAGGTAGC+CGG | 0.545298 | 3.3:-93291352 | None:intergenic |
GGTGATTGATTTGGAGTCGC+CGG | 0.547268 | 3.3:-93291197 | None:intergenic |
TGCTTGTGAGGCGTTTGGAA+CGG | 0.555408 | 3.3:+93291573 | MS.gene69393:CDS |
CTCTGTTCCCAAGACTCCAC+CGG | 0.561123 | 3.3:+93291259 | MS.gene69393:CDS |
CTCGTAACCTTAAGCTCTGA+AGG | 0.561863 | 3.3:-93291517 | None:intergenic |
CACGTTTACATGTGCTTCTG+CGG | 0.562492 | 3.3:+93291717 | MS.gene69393:CDS |
AAAGTCGAATGCTCCGGGAA+CGG | 0.563096 | 3.3:+93291319 | MS.gene69393:CDS |
ACGAAACCGGTGGTTGGAAG+CGG | 0.564357 | 3.3:-93291166 | None:intergenic |
GGCCTCCCCAGGAAGCGGGT+GGG | 0.565175 | 3.3:-93291219 | None:intergenic |
TTCACTCTTGACGGATCCGG+TGG | 0.567093 | 3.3:+93291370 | MS.gene69393:CDS |
ATCACCCCACCCGCTTCCTG+GGG | 0.571380 | 3.3:+93291214 | MS.gene69393:CDS |
AGAGCTTAAGGTTACGAGCG+TGG | 0.575561 | 3.3:+93291522 | MS.gene69393:CDS |
TACGAATACCGGTTGTATCA+GGG | 0.577024 | 3.3:+93291477 | MS.gene69393:CDS |
TGCAGTCAAAAGTCGTGGCA+GGG | 0.577535 | 3.3:+93292941 | MS.gene69393:intron |
TGAAGAACGAAACCGGTGGT+TGG | 0.582201 | 3.3:-93291172 | None:intergenic |
GGACAAAATCCGAAATCAGA+TGG | 0.593450 | 3.3:+93292962 | MS.gene69393:CDS |
TTACCATCACAACGGCTATG+TGG | 0.600620 | 3.3:+93293107 | MS.gene69393:CDS |
CCGGGAATTCTCTCCAACGC+CGG | 0.602290 | 3.3:+93291136 | MS.gene69393:CDS |
CTTACCGGCGATTGTAACTC+CGG | 0.603049 | 3.3:+93291295 | MS.gene69393:CDS |
GAGCCACATAGCCGTTGTGA+TGG | 0.604066 | 3.3:-93293110 | None:intergenic |
TGATCAGAGTGAAATATCAT+GGG | 0.606552 | 3.3:+93293048 | MS.gene69393:CDS |
TTAAGGTTACGAGCGTGGAT+GGG | 0.608209 | 3.3:+93291527 | MS.gene69393:CDS |
AACAACTCAGAATAACTCGA+AGG | 0.608498 | 3.3:-93291643 | None:intergenic |
GGTTGTATCAGGGATTTGCT+CGG | 0.611595 | 3.3:+93291487 | MS.gene69393:CDS |
GTCAAGAGTGAATTCCGCTA+AGG | 0.614672 | 3.3:-93291359 | None:intergenic |
CCAATGCTTGTAGTTCCACA+AGG | 0.616622 | 3.3:+93291436 | MS.gene69393:CDS |
TTATCACCGGAGCCACCTTG+TGG | 0.619692 | 3.3:-93291451 | None:intergenic |
TTTGCCGGAGTTACAATCGC+CGG | 0.625708 | 3.3:-93291299 | None:intergenic |
ACGGCACAATATTGTTGCAG+CGG | 0.630605 | 3.3:+93291592 | MS.gene69393:CDS |
GTCGAAGAAATCGAGTCCAC+CGG | 0.632997 | 3.3:-93291386 | None:intergenic |
CCAGAGCCGTTGTTAAGCTG+AGG | 0.634119 | 3.3:-93293001 | None:intergenic |
TCTGGCTCAATGGTGTACGT+TGG | 0.639261 | 3.3:+93293019 | MS.gene69393:CDS |
GGCGTGTAAAAGTGCTTGTG+AGG | 0.640993 | 3.3:+93291561 | MS.gene69393:CDS |
CGTGGATGGGAAAGAGAGCG+TGG | 0.649504 | 3.3:+93291540 | MS.gene69393:CDS |
CCTCCACTAACAACAGCCCA+AGG | 0.650691 | 3.3:+93291764 | MS.gene69393:CDS |
GGTATTCGTACAGTTATCAC+CGG | 0.657314 | 3.3:-93291464 | None:intergenic |
AGAAGTGGAAAAGCTGACAC+AGG | 0.666411 | 3.3:-93293132 | None:intergenic |
TTTCCACACATTGATACACG+TGG | 0.670795 | 3.3:-93293071 | None:intergenic |
AACTATTCTTACCATCACAA+CGG | 0.673194 | 3.3:+93293099 | MS.gene69393:CDS |
AGTCTTGGGAACAGAGAGTG+CGG | 0.677635 | 3.3:-93291252 | None:intergenic |
TCATCGCCTCAGCTTAACAA+CGG | 0.684947 | 3.3:+93292995 | MS.gene69393:CDS |
GGGCCACGTGTATCAATGTG+TGG | 0.689160 | 3.3:+93293068 | MS.gene69393:CDS |
ATGCTTGTAGTTCCACAAGG+TGG | 0.691545 | 3.3:+93291439 | MS.gene69393:CDS |
TACGCGTAGCTATACGCGCG+TGG | 0.692773 | 3.3:-93291679 | None:intergenic |
AATTCCGCTAAGGTAGCCGG+TGG | 0.692922 | 3.3:-93291349 | None:intergenic |
GGATTGAAGAACGAAACCGG+TGG | 0.773497 | 3.3:-93291176 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAGAATTAAATAAAACAAT+TGG | + | chr3.3:93292275-93292294 | MS.gene69393:intron | 10.0% |
!!! | AATTGTTTTATTTAATTCTA+TGG | - | chr3.3:93292276-93292295 | None:intergenic | 10.0% |
!!! | ATTGATAGATTTTGTATAAT+TGG | - | chr3.3:93292242-93292261 | None:intergenic | 15.0% |
!!! | TAATTGGTTTTATAAAGTAT+AGG | - | chr3.3:93292226-93292245 | None:intergenic | 15.0% |
!! | ATACTTAATCTTTCAATATC+AGG | + | chr3.3:93291061-93291080 | MS.gene69393:intron | 20.0% |
!! | CTTAAAAATGAGTTTATAGA+GGG | - | chr3.3:93292815-93292834 | None:intergenic | 20.0% |
!! | TAAGTTCTTATATCATTACA+TGG | + | chr3.3:93291000-93291019 | MS.gene69393:intron | 20.0% |
!! | TACTTAATCTTTCAATATCA+GGG | + | chr3.3:93291062-93291081 | MS.gene69393:intron | 20.0% |
!! | TTGAAAGATTAAGTATGATA+AGG | - | chr3.3:93291057-93291076 | None:intergenic | 20.0% |
!!! | GTTTAGCAATTTTATTTTAC+TGG | - | chr3.3:93290777-93290796 | None:intergenic | 20.0% |
!!! | TTAGTCAAATTTCACTTTTT+GGG | + | chr3.3:93292571-93292590 | MS.gene69393:intron | 20.0% |
!!! | TTTAGTCAAATTTCACTTTT+TGG | + | chr3.3:93292570-93292589 | MS.gene69393:intron | 20.0% |
!!! | TTTTTTCTTATAAATGTGAC+CGG | - | chr3.3:93292051-93292070 | None:intergenic | 20.0% |
! | ACTTAATCTTTCAATATCAG+GGG | + | chr3.3:93291063-93291082 | MS.gene69393:intron | 25.0% |
! | AGTACTAAAATAATCACCTT+GGG | - | chr3.3:93291783-93291802 | None:intergenic | 25.0% |
! | ATGTATCTAGTCACATTTAT+AGG | - | chr3.3:93292112-93292131 | None:intergenic | 25.0% |
! | ATTTGGGAACAAAAAGATTA+CGG | - | chr3.3:93290902-93290921 | None:intergenic | 25.0% |
! | CCATATAATCAATTGAGATT+CGG | - | chr3.3:93292483-93292502 | None:intergenic | 25.0% |
! | GCTTAAAAATGAGTTTATAG+AGG | - | chr3.3:93292816-93292835 | None:intergenic | 25.0% |
! | TAGTACTAAAATAATCACCT+TGG | - | chr3.3:93291784-93291803 | None:intergenic | 25.0% |
! | TTACAGAAAGAAAAGATTCT+TGG | - | chr3.3:93292891-93292910 | None:intergenic | 25.0% |
!! | AGAAAATGAACATGATTTTC+AGG | - | chr3.3:93290818-93290837 | None:intergenic | 25.0% |
!! | AGAACTTGAGAGATTTTATT+AGG | + | chr3.3:93292699-93292718 | MS.gene69393:intron | 25.0% |
!! | GAAAATGAACATGATTTTCA+GGG | - | chr3.3:93290817-93290836 | None:intergenic | 25.0% |
!! | TTTTTGCTTATAAATGTGAC+CGG | + | chr3.3:93292160-93292179 | MS.gene69393:intron | 25.0% |
!!! | TTGGTTTTATAAAGTATAGG+TGG | - | chr3.3:93292223-93292242 | None:intergenic | 25.0% |
AACTATTCTTACCATCACAA+CGG | + | chr3.3:93293099-93293118 | MS.gene69393:CDS | 30.0% | |
AAGATTACGGAATTGGAATT+TGG | - | chr3.3:93290889-93290908 | None:intergenic | 30.0% | |
CATTATCAATTAAGCACATG+TGG | + | chr3.3:93292530-93292549 | MS.gene69393:intron | 30.0% | |
CCGAATCTCAATTGATTATA+TGG | + | chr3.3:93292480-93292499 | MS.gene69393:intron | 30.0% | |
GAACAAAAAGATTACGGAAT+TGG | - | chr3.3:93290896-93290915 | None:intergenic | 30.0% | |
TCTTTCTTCTGTGGTAATTT+GGG | - | chr3.3:93290918-93290937 | None:intergenic | 30.0% | |
TGATCAGAGTGAAATATCAT+GGG | + | chr3.3:93293048-93293067 | MS.gene69393:CDS | 30.0% | |
TGTGATGGTAAGAATAGTTT+GGG | - | chr3.3:93293098-93293117 | None:intergenic | 30.0% | |
TTCTTTCTTCTGTGGTAATT+TGG | - | chr3.3:93290919-93290938 | None:intergenic | 30.0% | |
TTGATCAGAGTGAAATATCA+TGG | + | chr3.3:93293047-93293066 | MS.gene69393:CDS | 30.0% | |
TTGTGATGGTAAGAATAGTT+TGG | - | chr3.3:93293099-93293118 | None:intergenic | 30.0% | |
TTTGAATGAAGTATGAACGT+TGG | + | chr3.3:93291892-93291911 | MS.gene69393:intron | 30.0% | |
! | AATTGGAATTTGGAACTGAA+AGG | - | chr3.3:93290879-93290898 | None:intergenic | 30.0% |
! | CAATCAATTGGAGAGTATAA+AGG | - | chr3.3:93292453-93292472 | None:intergenic | 30.0% |
!! | AAGTATAAACCACTTTTCCT+TGG | - | chr3.3:93292399-93292418 | None:intergenic | 30.0% |
!! | GGATTAGAATTTTAGCCTTT+AGG | + | chr3.3:93292501-93292520 | MS.gene69393:intron | 30.0% |
!! | TAGAGAGTACTAAGTACTAA+CGG | - | chr3.3:93291940-93291959 | None:intergenic | 30.0% |
!! | TTAGAATTTTAGCCTTTAGG+TGG | + | chr3.3:93292504-93292523 | MS.gene69393:intron | 30.0% |
!! | TTGATAATGTATCCACCTAA+AGG | - | chr3.3:93292519-93292538 | None:intergenic | 30.0% |
!!! | TTTCACTTTTTGGGATATCA+CGG | + | chr3.3:93292580-93292599 | MS.gene69393:intron | 30.0% |
!!! | TTTTACTGGCCTTTTTGATT+CGG | - | chr3.3:93290763-93290782 | None:intergenic | 30.0% |
AAATTGCTAAACTGCTACAC+TGG | + | chr3.3:93290785-93290804 | MS.gene69393:intron | 35.0% | |
AACAACTCAGAATAACTCGA+AGG | - | chr3.3:93291646-93291665 | None:intergenic | 35.0% | |
GATTCTTGGCGTACATTATT+TGG | - | chr3.3:93292877-93292896 | None:intergenic | 35.0% | |
GGAAAATTCTCATGTCTTAC+CGG | + | chr3.3:93291280-93291299 | MS.gene69393:CDS | 35.0% | |
TAACTATTCTGTACTCCATC+CGG | + | chr3.3:93292029-93292048 | MS.gene69393:intron | 35.0% | |
TACAAATCACATACTTCCTC+CGG | - | chr3.3:93292182-93292201 | None:intergenic | 35.0% | |
TCTCCTATAGTCCTATGTAT+GGG | + | chr3.3:93292355-93292374 | MS.gene69393:intron | 35.0% | |
TTCTTATAAATGTGACCGGA+TGG | - | chr3.3:93292047-93292066 | None:intergenic | 35.0% | |
! | GGTAAGACATGAGAATTTTC+CGG | - | chr3.3:93291281-93291300 | None:intergenic | 35.0% |
! | TTCGGTGTACTTCAATCAAT+TGG | - | chr3.3:93292465-93292484 | None:intergenic | 35.0% |
!!! | TTTACTGGCCTTTTTGATTC+GGG | - | chr3.3:93290762-93290781 | None:intergenic | 35.0% |
AACTCTATGCTTAGCTCGAA+GGG | + | chr3.3:93292298-93292317 | MS.gene69393:intron | 40.0% | |
ACAAATGCAACTACACAGTC+TGG | + | chr3.3:93291113-93291132 | MS.gene69393:CDS | 40.0% | |
CAAAATCTGGTCCCATACAT+AGG | - | chr3.3:93292369-93292388 | None:intergenic | 40.0% | |
CTCGAAGGTTTACAAGTGTT+AGG | - | chr3.3:93291631-93291650 | None:intergenic | 40.0% | |
GCAAGTTCTTCTTTCTTCTG+TGG | - | chr3.3:93290927-93290946 | None:intergenic | 40.0% | |
GGACAAAATCCGAAATCAGA+TGG | + | chr3.3:93292962-93292981 | MS.gene69393:CDS | 40.0% | |
GGTATTCGTACAGTTATCAC+CGG | - | chr3.3:93291467-93291486 | None:intergenic | 40.0% | |
GGTGATAACTGTACGAATAC+CGG | + | chr3.3:93291466-93291485 | MS.gene69393:CDS | 40.0% | |
GGTTTATAATGCACTGCATC+TGG | + | chr3.3:93292332-93292351 | MS.gene69393:intron | 40.0% | |
GTCTCCTATAGTCCTATGTA+TGG | + | chr3.3:93292354-93292373 | MS.gene69393:intron | 40.0% | |
TGAAGAAAGCCAAGGAAAAG+TGG | + | chr3.3:93292387-93292406 | MS.gene69393:intron | 40.0% | |
TTAGCGGAATTCACTCTTGA+CGG | + | chr3.3:93291361-93291380 | MS.gene69393:CDS | 40.0% | |
TTCGACGTGAGTTTAGTTGA+CGG | + | chr3.3:93291403-93291422 | MS.gene69393:CDS | 40.0% | |
TTGCTTATAAATGTGACCGG+AGG | + | chr3.3:93292163-93292182 | MS.gene69393:intron | 40.0% | |
TTTCCACACATTGATACACG+TGG | - | chr3.3:93293074-93293093 | None:intergenic | 40.0% | |
! | AAGACATGAGAATTTTCCGG+TGG | - | chr3.3:93291278-93291297 | None:intergenic | 40.0% |
! | CCTTGGCTTTCTTCAAAATC+TGG | - | chr3.3:93292382-93292401 | None:intergenic | 40.0% |
! | GTTTTTGCAGTCAAAAGTCG+TGG | + | chr3.3:93292936-93292955 | MS.gene69393:intron | 40.0% |
! | TACGAATACCGGTTGTATCA+GGG | + | chr3.3:93291477-93291496 | MS.gene69393:CDS | 40.0% |
!! | ATGAACATGATTTTCAGGGC+TGG | - | chr3.3:93290813-93290832 | None:intergenic | 40.0% |
!! | CCAGATTTTGAAGAAAGCCA+AGG | + | chr3.3:93292379-93292398 | MS.gene69393:intron | 40.0% |
ACGGCACAATATTGTTGCAG+CGG | + | chr3.3:93291592-93291611 | MS.gene69393:CDS | 45.0% | |
AGAAGTGGAAAAGCTGACAC+AGG | - | chr3.3:93293135-93293154 | None:intergenic | 45.0% | |
ATGCTTGTAGTTCCACAAGG+TGG | + | chr3.3:93291439-93291458 | MS.gene69393:CDS | 45.0% | |
CACGTTTACATGTGCTTCTG+CGG | + | chr3.3:93291717-93291736 | MS.gene69393:CDS | 45.0% | |
CCAATGCTTGTAGTTCCACA+AGG | + | chr3.3:93291436-93291455 | MS.gene69393:CDS | 45.0% | |
CCTTGTGGAACTACAAGCAT+TGG | - | chr3.3:93291439-93291458 | None:intergenic | 45.0% | |
GAACTCTATGCTTAGCTCGA+AGG | + | chr3.3:93292297-93292316 | MS.gene69393:intron | 45.0% | |
GAGCAAATCCCTGATACAAC+CGG | - | chr3.3:93291488-93291507 | None:intergenic | 45.0% | |
GAGTCACTGCCATCTGATTT+CGG | - | chr3.3:93292974-93292993 | None:intergenic | 45.0% | |
GCTCGAAGGGCTACTAATAA+TGG | + | chr3.3:93292311-93292330 | MS.gene69393:intron | 45.0% | |
GGTCCCATACATAGGACTAT+AGG | - | chr3.3:93292361-93292380 | None:intergenic | 45.0% | |
GTCAAGAGTGAATTCCGCTA+AGG | - | chr3.3:93291362-93291381 | None:intergenic | 45.0% | |
TCATCGCCTCAGCTTAACAA+CGG | + | chr3.3:93292995-93293014 | MS.gene69393:CDS | 45.0% | |
TTAAGGTTACGAGCGTGGAT+GGG | + | chr3.3:93291527-93291546 | MS.gene69393:CDS | 45.0% | |
TTACCATCACAACGGCTATG+TGG | + | chr3.3:93293107-93293126 | MS.gene69393:CDS | 45.0% | |
! | ACCGGTTTCGTTCTTCAATC+CGG | + | chr3.3:93291178-93291197 | MS.gene69393:CDS | 45.0% |
! | AGAATTTTCCGGTGGAGTCT+TGG | - | chr3.3:93291270-93291289 | None:intergenic | 45.0% |
! | CTCGTAACCTTAAGCTCTGA+AGG | - | chr3.3:93291520-93291539 | None:intergenic | 45.0% |
! | GAATTCACTCTTGACGGATC+CGG | + | chr3.3:93291367-93291386 | MS.gene69393:CDS | 45.0% |
! | GAATTTTCCGGTGGAGTCTT+GGG | - | chr3.3:93291269-93291288 | None:intergenic | 45.0% |
! | GGTTGTATCAGGGATTTGCT+CGG | + | chr3.3:93291487-93291506 | MS.gene69393:CDS | 45.0% |
! | GTACGAATACCGGTTGTATC+AGG | + | chr3.3:93291476-93291495 | MS.gene69393:CDS | 45.0% |
!! | AAAAGTGCTTGTGAGGCGTT+TGG | + | chr3.3:93291568-93291587 | MS.gene69393:CDS | 45.0% |
!!! | TAATTTAATGTTTTAAAAAA+CGG | - | chr3.3:93292011-93292030 | None:intergenic | 5.0% |
AAAGTCGAATGCTCCGGGAA+CGG | + | chr3.3:93291319-93291338 | MS.gene69393:CDS | 50.0% | |
AGAGCTTAAGGTTACGAGCG+TGG | + | chr3.3:93291522-93291541 | MS.gene69393:CDS | 50.0% | |
AGGCAAGGCCCGAATCAAAA+AGG | + | chr3.3:93290751-93290770 | MS.gene69393:intron | 50.0% | |
AGTCTTGGGAACAGAGAGTG+CGG | - | chr3.3:93291255-93291274 | None:intergenic | 50.0% | |
ATGCAACTACACAGTCTGGC+CGG | + | chr3.3:93291117-93291136 | MS.gene69393:CDS | 50.0% | |
CTTAAGGTTACGAGCGTGGA+TGG | + | chr3.3:93291526-93291545 | MS.gene69393:CDS | 50.0% | |
CTTACCGGCGATTGTAACTC+CGG | + | chr3.3:93291295-93291314 | MS.gene69393:CDS | 50.0% | |
GCCGGATTGAAGAACGAAAC+CGG | - | chr3.3:93291182-93291201 | None:intergenic | 50.0% | |
GGATTGAAGAACGAAACCGG+TGG | - | chr3.3:93291179-93291198 | None:intergenic | 50.0% | |
GTCGAAGAAATCGAGTCCAC+CGG | - | chr3.3:93291389-93291408 | None:intergenic | 50.0% | |
GTGAATTCCGCTAAGGTAGC+CGG | - | chr3.3:93291355-93291374 | None:intergenic | 50.0% | |
TCACCTTGGGCTGTTGTTAG+TGG | - | chr3.3:93291770-93291789 | None:intergenic | 50.0% | |
TGAAGAACGAAACCGGTGGT+TGG | - | chr3.3:93291175-93291194 | None:intergenic | 50.0% | |
TGCAGTCAAAAGTCGTGGCA+GGG | + | chr3.3:93292941-93292960 | MS.gene69393:intron | 50.0% | |
TTGCAGTCAAAAGTCGTGGC+AGG | + | chr3.3:93292940-93292959 | MS.gene69393:intron | 50.0% | |
TTTGCCGGAGTTACAATCGC+CGG | - | chr3.3:93291302-93291321 | None:intergenic | 50.0% | |
! | TAACAACGGCTCTGGCTCAA+TGG | + | chr3.3:93293009-93293028 | MS.gene69393:CDS | 50.0% |
! | TCTGGCTCAATGGTGTACGT+TGG | + | chr3.3:93293019-93293038 | MS.gene69393:CDS | 50.0% |
! | TGCTTGTGAGGCGTTTGGAA+CGG | + | chr3.3:93291573-93291592 | MS.gene69393:CDS | 50.0% |
!! | GGCGTGTAAAAGTGCTTGTG+AGG | + | chr3.3:93291561-93291580 | MS.gene69393:CDS | 50.0% |
!! | GGTGATTGATTTGGAGTCGC+CGG | - | chr3.3:93291200-93291219 | None:intergenic | 50.0% |
AATTCCGCTAAGGTAGCCGG+TGG | - | chr3.3:93291352-93291371 | None:intergenic | 55.0% | |
ACGAAACCGGTGGTTGGAAG+CGG | - | chr3.3:93291169-93291188 | None:intergenic | 55.0% | |
AGCGGGTGGGGTGATTGATT+TGG | - | chr3.3:93291209-93291228 | None:intergenic | 55.0% | |
CCAGAGCCGTTGTTAAGCTG+AGG | - | chr3.3:93293004-93293023 | None:intergenic | 55.0% | |
CCTCAGCTTAACAACGGCTC+TGG | + | chr3.3:93293001-93293020 | MS.gene69393:CDS | 55.0% | |
CCTCCACTAACAACAGCCCA+AGG | + | chr3.3:93291764-93291783 | MS.gene69393:CDS | 55.0% | |
CCTTGGGCTGTTGTTAGTGG+AGG | - | chr3.3:93291767-93291786 | None:intergenic | 55.0% | |
CGCGTGTCCTTCAGAGCTTA+AGG | + | chr3.3:93291510-93291529 | MS.gene69393:CDS | 55.0% | |
CTCTGTTCCCAAGACTCCAC+CGG | + | chr3.3:93291259-93291278 | MS.gene69393:CDS | 55.0% | |
GAGCCACATAGCCGTTGTGA+TGG | - | chr3.3:93293113-93293132 | None:intergenic | 55.0% | |
GGCTCAATGGTGTACGTTGG+TGG | + | chr3.3:93293022-93293041 | MS.gene69393:CDS | 55.0% | |
GGGCCACGTGTATCAATGTG+TGG | + | chr3.3:93293068-93293087 | MS.gene69393:CDS | 55.0% | |
GTAGTTCCACAAGGTGGCTC+CGG | + | chr3.3:93291445-93291464 | MS.gene69393:CDS | 55.0% | |
TATTGTTGCAGCGGCGCGTA+TGG | + | chr3.3:93291601-93291620 | MS.gene69393:CDS | 55.0% | |
TCCGGCAAAGTCGAATGCTC+CGG | + | chr3.3:93291313-93291332 | MS.gene69393:CDS | 55.0% | |
TGCAACTACACAGTCTGGCC+GGG | + | chr3.3:93291118-93291137 | MS.gene69393:CDS | 55.0% | |
TTATCACCGGAGCCACCTTG+TGG | - | chr3.3:93291454-93291473 | None:intergenic | 55.0% | |
! | AACACCACCGGCTACCTTAG+CGG | + | chr3.3:93291345-93291364 | MS.gene69393:CDS | 55.0% |
! | TTCACTCTTGACGGATCCGG+TGG | + | chr3.3:93291370-93291389 | MS.gene69393:CDS | 55.0% |
!! | TTGATTCGGGCCTTGCCTTG+CGG | - | chr3.3:93290749-93290768 | None:intergenic | 55.0% |
AATCACCCCACCCGCTTCCT+GGG | + | chr3.3:93291213-93291232 | MS.gene69393:CDS | 60.0% | |
CCGGCAAAGTCGAATGCTCC+GGG | + | chr3.3:93291314-93291333 | MS.gene69393:CDS | 60.0% | |
CCGGGAATTCTCTCCAACGC+CGG | + | chr3.3:93291136-93291155 | MS.gene69393:CDS | 60.0% | |
CGTGGATGGGAAAGAGAGCG+TGG | + | chr3.3:93291540-93291559 | MS.gene69393:CDS | 60.0% | |
GTTGCACCGCTTCCAACCAC+CGG | + | chr3.3:93291160-93291179 | MS.gene69393:CDS | 60.0% | |
TACGCGTAGCTATACGCGCG+TGG | - | chr3.3:93291682-93291701 | None:intergenic | 60.0% | |
TTCCTGGGGAGGCCGTTTCT+GGG | + | chr3.3:93291228-93291247 | MS.gene69393:CDS | 60.0% | |
! | AGAGAGTGCGGCCCCAGAAA+CGG | - | chr3.3:93291243-93291262 | None:intergenic | 60.0% |
! | CCCGGAGCATTCGACTTTGC+CGG | - | chr3.3:93291317-93291336 | None:intergenic | 60.0% |
! | CCGGCGTTGGAGAGAATTCC+CGG | - | chr3.3:93291139-93291158 | None:intergenic | 60.0% |
AAACGGCCTCCCCAGGAAGC+GGG | - | chr3.3:93291226-93291245 | None:intergenic | 65.0% | |
ATCACCCCACCCGCTTCCTG+GGG | + | chr3.3:93291214-93291233 | MS.gene69393:CDS | 65.0% | |
CAATCACCCCACCCGCTTCC+TGG | + | chr3.3:93291212-93291231 | MS.gene69393:CDS | 65.0% | |
CTTCCTGGGGAGGCCGTTTC+TGG | + | chr3.3:93291227-93291246 | MS.gene69393:CDS | 65.0% | |
GAAACGGCCTCCCCAGGAAG+CGG | - | chr3.3:93291227-93291246 | None:intergenic | 65.0% | |
GGTTGGAAGCGGTGCAACGC+CGG | - | chr3.3:93291158-93291177 | None:intergenic | 65.0% | |
TCCTGGGGAGGCCGTTTCTG+GGG | + | chr3.3:93291229-93291248 | MS.gene69393:CDS | 65.0% | |
TGGGTCCACTCCGCAAGGCA+AGG | + | chr3.3:93290736-93290755 | MS.gene69393:intron | 65.0% | |
AAGCGGTGCAACGCCGGCGT+TGG | - | chr3.3:93291152-93291171 | None:intergenic | 70.0% | |
CGGGAACGGCGCAACACCAC+CGG | + | chr3.3:93291333-93291352 | MS.gene69393:CDS | 70.0% | |
TCGGGCCTTGCCTTGCGGAG+TGG | - | chr3.3:93290744-93290763 | None:intergenic | 70.0% | |
!! | CGGTGGTGTTGCGCCGTTCC+CGG | - | chr3.3:93291335-93291354 | None:intergenic | 70.0% |
ACCCCACCCGCTTCCTGGGG+AGG | + | chr3.3:93291217-93291236 | MS.gene69393:CDS | 75.0% | |
GCCCCAGAAACGGCCTCCCC+AGG | - | chr3.3:93291233-93291252 | None:intergenic | 75.0% | |
GCCTCCCCAGGAAGCGGGTG+GGG | - | chr3.3:93291221-93291240 | None:intergenic | 75.0% | |
GGCCTCCCCAGGAAGCGGGT+GGG | - | chr3.3:93291222-93291241 | None:intergenic | 75.0% | |
! | CGGCCTCCCCAGGAAGCGGG+TGG | - | chr3.3:93291223-93291242 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 93290735 | 93293156 | 93290735 | ID=MS.gene69393 |
chr3.3 | mRNA | 93290735 | 93293156 | 93290735 | ID=MS.gene69393.t1;Parent=MS.gene69393 |
chr3.3 | exon | 93290735 | 93290738 | 93290735 | ID=MS.gene69393.t1.exon1;Parent=MS.gene69393.t1 |
chr3.3 | CDS | 93290735 | 93290738 | 93290735 | ID=cds.MS.gene69393.t1;Parent=MS.gene69393.t1 |
chr3.3 | exon | 93291083 | 93291785 | 93291083 | ID=MS.gene69393.t1.exon2;Parent=MS.gene69393.t1 |
chr3.3 | CDS | 93291083 | 93291785 | 93291083 | ID=cds.MS.gene69393.t1;Parent=MS.gene69393.t1 |
chr3.3 | exon | 93292946 | 93293156 | 93292946 | ID=MS.gene69393.t1.exon3;Parent=MS.gene69393.t1 |
chr3.3 | CDS | 93292946 | 93293156 | 93292946 | ID=cds.MS.gene69393.t1;Parent=MS.gene69393.t1 |
Gene Sequence |
Protein sequence |