AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene064765

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064765.t1 MTR_3g114030 97.458 236 6 0 33 268 1 236 8.21e-169 469
MS.gene064765.t1 MTR_1g025420 73.885 314 73 5 29 336 13 323 2.31e-165 464
MS.gene064765.t1 MTR_1g025420 81.277 235 44 0 29 263 13 247 2.22e-142 403
MS.gene064765.t1 MTR_5g022310 70.683 249 68 4 33 278 20 266 1.52e-117 342
MS.gene064765.t1 MTR_5g022310 73.276 232 58 3 33 261 20 250 1.76e-116 337
MS.gene064765.t1 MTR_8g037890 67.871 249 75 4 26 272 13 258 2.94e-114 334
MS.gene064765.t1 MTR_8g075550 68.273 249 71 4 35 278 24 269 3.54e-113 331
MS.gene064765.t1 MTR_8g056820 67.949 234 71 3 29 261 16 246 7.09e-111 323
MS.gene064765.t1 MTR_4g073730 62.661 233 85 2 30 261 16 247 1.14e-102 303
MS.gene064765.t1 MTR_4g073730 62.661 233 85 2 30 261 16 247 3.63e-102 303
MS.gene064765.t1 MTR_4g073720 56.296 270 110 5 35 304 21 282 1.41e-92 280
MS.gene064765.t1 MTR_8g075510 54.475 257 106 5 10 265 1 247 5.25e-88 265
MS.gene064765.t1 MTR_8g075510 58.547 234 86 6 29 261 20 243 1.86e-87 265
MS.gene064765.t1 MTR_5g022350 53.409 264 111 6 30 292 21 273 5.40e-86 262
MS.gene064765.t1 MTR_7g102380 55.217 230 100 3 35 264 17 243 1.10e-85 258
MS.gene064765.t1 MTR_2g068655 55.702 228 97 3 35 261 27 251 1.65e-83 255
MS.gene064765.t1 MTR_2g068030 52.991 234 104 5 36 267 20 249 6.76e-83 252
MS.gene064765.t1 MTR_2g067980 54.508 244 103 5 36 275 21 260 9.49e-82 268
MS.gene064765.t1 MTR_1g062590 55.405 222 96 3 40 261 23 241 3.98e-80 244
MS.gene064765.t1 MTR_8g036215 52.720 239 108 5 23 261 4 237 4.43e-79 241
MS.gene064765.t1 MTR_2g069660 51.082 231 111 2 31 261 14 242 7.39e-79 241
MS.gene064765.t1 MTR_1g062340 54.274 234 102 4 30 263 15 243 1.72e-78 240
MS.gene064765.t1 MTR_1g062350 55.128 234 100 4 30 263 15 243 3.03e-78 239
MS.gene064765.t1 MTR_1g062370 54.701 234 101 4 30 263 15 243 3.20e-78 239
MS.gene064765.t1 MTR_1g062630 53.390 236 105 4 30 265 15 245 3.87e-78 240
MS.gene064765.t1 MTR_1g062660 54.701 234 101 4 30 263 15 243 1.19e-77 238
MS.gene064765.t1 MTR_1g021945 55.752 226 92 6 38 261 25 244 2.08e-76 235
MS.gene064765.t1 MTR_6g079580 51.515 231 107 4 31 261 14 239 1.32e-74 230
MS.gene064765.t1 MTR_3g111620 54.464 224 96 6 39 261 27 245 1.01e-72 226
MS.gene064765.t1 MTR_8g107140 52.055 219 100 4 43 261 31 244 8.81e-71 221
MS.gene064765.t1 MTR_6g009480 48.889 225 109 6 40 261 30 251 2.03e-63 202
MS.gene064765.t1 MTR_3g068015 49.778 225 106 7 39 261 28 247 6.76e-63 201
MS.gene064765.t1 MTR_1g062690 48.718 234 91 5 30 263 15 219 1.05e-61 196
MS.gene064765.t1 MTR_5g059200 48.444 225 104 8 38 262 28 240 2.82e-61 197
MS.gene064765.t1 MTR_7g062610 50.000 222 105 6 41 261 25 241 4.34e-61 196
MS.gene064765.t1 MTR_4g063630 44.889 225 116 7 41 261 31 251 9.47e-59 190
MS.gene064765.t1 MTR_2g067990 45.714 245 103 8 32 275 20 235 3.79e-55 194
MS.gene064765.t1 MTR_5g023850 51.176 170 78 3 33 199 20 187 2.25e-51 170
MS.gene064765.t1 MTR_5g010640 42.358 229 103 8 41 261 28 235 3.61e-47 159
MS.gene064765.t1 MTR_2g067970 44.949 198 100 7 82 275 3 195 2.60e-46 168
MS.gene064765.t1 MTR_5g010635 39.111 225 113 7 38 261 23 224 6.02e-45 154
MS.gene064765.t1 MTR_8g096900 39.381 226 110 8 38 261 47 247 2.44e-42 147
MS.gene064765.t1 MTR_5g022350 54.815 135 56 3 30 163 86 216 7.80e-42 145
MS.gene064765.t1 MTR_2g063150 34.667 225 136 6 32 255 30 244 2.99e-38 137
MS.gene064765.t1 MTR_7g076360 37.850 214 68 4 38 251 7 155 1.30e-36 130
MS.gene064765.t1 MTR_8g089020 51.538 130 57 3 124 253 33 156 2.58e-36 129
MS.gene064765.t1 MTR_3g114040 92.958 71 4 1 269 338 33 103 2.44e-35 124
MS.gene064765.t1 MTR_3g081550 63.830 94 34 0 124 217 16 109 6.53e-35 124
MS.gene064765.t1 MTR_1g062390 29.508 244 145 7 29 263 14 239 3.38e-29 112
MS.gene064765.t1 MTR_8g096910 45.217 115 53 4 41 154 24 129 8.06e-24 96.7
MS.gene064765.t1 MTR_8g096920 44.348 115 54 4 41 154 21 126 5.10e-20 86.3
MS.gene064765.t1 MTR_1g062640 43.750 96 52 2 85 180 53 146 1.02e-15 73.9
MS.gene064765.t1 MTR_5g068670 48.529 68 33 2 90 157 25 90 3.15e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene064765.t1 AT1G75800 61.129 319 108 4 31 336 15 330 3.62e-133 382
MS.gene064765.t1 AT1G20030 64.052 306 102 4 35 338 16 315 9.76e-133 381
MS.gene064765.t1 AT1G20030 63.816 304 102 4 37 338 1 298 3.51e-131 376
MS.gene064765.t1 AT4G36010 63.060 268 84 7 35 291 19 282 1.73e-110 324
MS.gene064765.t1 AT4G36010 63.060 268 84 7 35 291 19 282 1.73e-110 324
MS.gene064765.t1 AT2G17860 63.598 239 82 4 29 263 13 250 2.37e-104 306
MS.gene064765.t1 AT4G38670 57.143 266 103 4 36 300 20 275 8.65e-103 303
MS.gene064765.t1 AT4G38670 57.143 266 103 4 36 300 20 275 8.65e-103 303
MS.gene064765.t1 AT4G38670 57.143 266 103 4 36 300 4 259 1.41e-102 302
MS.gene064765.t1 AT4G38660 57.752 258 98 5 29 286 20 266 7.13e-93 280
MS.gene064765.t1 AT4G38660 59.127 252 92 5 35 286 4 244 1.49e-92 279
MS.gene064765.t1 AT4G24180 57.358 265 98 5 30 288 19 274 1.07e-91 276
MS.gene064765.t1 AT4G24180 57.576 264 97 5 31 288 25 279 1.43e-91 276
MS.gene064765.t1 AT5G38280 54.286 245 110 2 32 274 18 262 3.42e-91 286
MS.gene064765.t1 AT5G38280 54.733 243 108 2 32 272 18 260 6.84e-91 285
MS.gene064765.t1 AT4G24180 59.583 240 85 4 30 263 19 252 1.50e-90 271
MS.gene064765.t1 AT4G24180 59.833 239 84 4 31 263 25 257 1.87e-90 271
MS.gene064765.t1 AT4G24180 58.296 223 82 3 30 246 19 236 1.79e-82 253
MS.gene064765.t1 AT4G24180 58.559 222 81 3 31 246 25 241 2.11e-82 253
MS.gene064765.t1 AT5G24620 50.549 273 114 7 29 292 11 271 1.29e-81 254
MS.gene064765.t1 AT5G24620 50.549 273 114 7 29 292 66 326 3.30e-81 255
MS.gene064765.t1 AT5G24620 50.549 273 114 7 29 292 87 347 5.79e-81 255
MS.gene064765.t1 AT1G19320 56.277 231 91 6 36 262 23 247 9.61e-79 241
MS.gene064765.t1 AT1G75040 57.080 226 89 6 36 261 21 238 1.35e-77 238
MS.gene064765.t1 AT1G75050 54.825 228 98 5 38 265 24 246 5.33e-77 236
MS.gene064765.t1 AT1G75030 53.333 225 99 6 38 261 23 242 1.31e-74 230
MS.gene064765.t1 AT1G18250 51.092 229 107 4 38 266 21 244 2.13e-74 230
MS.gene064765.t1 AT1G18250 51.092 229 107 4 38 266 20 243 2.40e-74 229
MS.gene064765.t1 AT1G73620 51.786 224 103 4 38 261 41 259 3.08e-73 228
MS.gene064765.t1 AT1G77700 50.000 230 95 9 38 263 60 273 4.24e-66 211
MS.gene064765.t1 AT1G77700 50.439 228 93 9 40 263 90 301 8.38e-66 211
MS.gene064765.t1 AT2G28790 49.107 224 107 6 41 261 54 273 8.64e-66 209
MS.gene064765.t1 AT2G28790 49.107 224 107 6 41 261 29 248 1.04e-65 207
MS.gene064765.t1 AT1G77700 49.356 233 98 9 38 266 60 276 1.46e-65 209
MS.gene064765.t1 AT4G36000 52.444 225 82 8 115 336 1 203 6.26e-62 197
MS.gene064765.t1 AT4G36000 52.444 225 82 8 115 336 1 203 6.26e-62 197
MS.gene064765.t1 AT5G40020 46.903 226 115 5 39 263 28 249 5.28e-61 196
MS.gene064765.t1 AT1G70250 44.958 238 118 6 37 268 143 373 5.40e-61 209
MS.gene064765.t1 AT4G18250 42.279 272 147 6 31 300 48 311 1.59e-59 203
MS.gene064765.t1 AT4G18253 44.255 235 115 6 33 263 17 239 3.23e-59 191
MS.gene064765.t1 AT5G02140 46.847 222 113 5 41 261 23 240 1.28e-58 189
MS.gene064765.t1 AT5G02140 46.847 222 113 5 41 261 23 240 1.29e-58 191
MS.gene064765.t1 AT4G11650 39.744 234 116 8 29 261 13 222 1.20e-45 156
MS.gene064765.t1 AT5G24620 49.682 157 64 4 146 298 15 160 3.60e-39 140
MS.gene064765.t1 AT2G24810 58.025 81 31 2 182 262 116 193 6.61e-23 94.7

Find 114 sgRNAs with CRISPR-Local

Find 207 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCCTGGGGAGGCCGTTTC+TGG -0.052359 3.4:+97936453 MS.gene064765:CDS
CAATCACCCCACCCGCTTCC+TGG 0.293774 3.4:+97936438 MS.gene064765:CDS
CGGTGGTGTTGCGCCGTTCC+CGG 0.299087 3.4:-97936558 None:intergenic
GTACGAATACCGGTTGTATC+AGG 0.300485 3.4:+97936702 MS.gene064765:CDS
TTCCTGGGGAGGCCGTTTCT+GGG 0.311657 3.4:+97936454 MS.gene064765:CDS
AGCGGGTGGGGTGATTGATT+TGG 0.328396 3.4:-97936432 None:intergenic
GAGTCACTGCCATCTGATTT+CGG 0.335928 3.4:-97938169 None:intergenic
CCCGGAGCATTCGACTTTGC+CGG 0.336054 3.4:-97936540 None:intergenic
GAGAGAAACGGCGGAGGTTA+TGG 0.344308 3.4:+97935580 MS.gene064765:CDS
CCGGCGTTGGAGAGAATTCC+CGG 0.381681 3.4:-97936362 None:intergenic
TCACCTTGGGCTGTTGTTAG+TGG 0.384731 3.4:-97936993 None:intergenic
TTGTGATGGTAAGAATAGTT+TGG 0.385951 3.4:-97938294 None:intergenic
GGAAAATTCTCATGTCTTAC+CGG 0.390131 3.4:+97936506 MS.gene064765:CDS
TGTGATGGTAAGAATAGTTT+GGG 0.391149 3.4:-97938293 None:intergenic
GCCTCCCCAGGAAGCGGGTG+GGG 0.392476 3.4:-97936444 None:intergenic
CGGAGGTTATGGTTTACGTC+GGG 0.417279 3.4:+97935591 MS.gene064765:CDS
AATCACCCCACCCGCTTCCT+GGG 0.417844 3.4:+97936439 MS.gene064765:CDS
CGCGTGTCCTTCAGAGCTTA+AGG 0.433220 3.4:+97936736 MS.gene064765:CDS
ACCGGTTTCGTTCTTCAATC+CGG 0.449618 3.4:+97936404 MS.gene064765:CDS
TATTGTTGCAGCGGCGCGTA+TGG 0.455532 3.4:+97936827 MS.gene064765:CDS
TTGCAGTCAAAAGTCGTGGC+AGG 0.458754 3.4:+97938138 MS.gene064765:intron
CTTAAGGTTACGAGCGTGGA+TGG 0.458977 3.4:+97936752 MS.gene064765:CDS
AACACCACCGGCTACCTTAG+TGG 0.460962 3.4:+97936571 MS.gene064765:CDS
GCCCCAGAAACGGCCTCCCC+AGG 0.462616 3.4:-97936456 None:intergenic
TTGATCAGAGTGAAATATCA+TGG 0.466410 3.4:+97938245 MS.gene064765:CDS
CTCGAAGGTTTACAAGTGTT+AGG 0.467705 3.4:-97936854 None:intergenic
AAAAGTGCTTGTGAGGCGTT+TGG 0.468766 3.4:+97936794 MS.gene064765:CDS
TTAGTGGAATTCACTCTTGA+CGG 0.483339 3.4:+97936587 MS.gene064765:CDS
ATGCAACTACACAGTCTGGC+CGG 0.486519 3.4:+97936343 MS.gene064765:CDS
AGAGAGTGCGGCCCCAGAAA+CGG 0.490637 3.4:-97936466 None:intergenic
AAGCGGTGCAACGCCGGCGT+TGG 0.494696 3.4:-97936375 None:intergenic
TCCGGCAAAGTCGAATGCTC+CGG 0.498921 3.4:+97936539 MS.gene064765:CDS
GGTTGGAAGCGGTGCAACGC+CGG 0.499056 3.4:-97936381 None:intergenic
CGGGAACGGCGCAACACCAC+CGG 0.499852 3.4:+97936559 MS.gene064765:CDS
ACCCCACCCGCTTCCTGGGG+AGG 0.502582 3.4:+97936443 MS.gene064765:CDS
TAACAACGGCTCTGGCTCAA+TGG 0.504154 3.4:+97938207 MS.gene064765:CDS
ACAAATGCAACTACACAGTC+TGG 0.504490 3.4:+97936339 MS.gene064765:CDS
GTAGTTCCACAAGGTGGCTC+CGG 0.507977 3.4:+97936671 MS.gene064765:CDS
GGCTCAATGGTGTACGTTGG+TGG 0.508308 3.4:+97938220 MS.gene064765:CDS
GTTGCACCGCTTCCAACCAC+CGG 0.509906 3.4:+97936386 MS.gene064765:CDS
CGGCCTCCCCAGGAAGCGGG+TGG 0.513133 3.4:-97936446 None:intergenic
GCCGGATTGAAGAACGAAAC+CGG 0.514473 3.4:-97936405 None:intergenic
GAAACGGCCTCCCCAGGAAG+CGG 0.516631 3.4:-97936450 None:intergenic
CCGGCAAAGTCGAATGCTCC+GGG 0.517602 3.4:+97936540 MS.gene064765:CDS
AAACGGCCTCCCCAGGAAGC+GGG 0.522887 3.4:-97936449 None:intergenic
GGTGATAACTGTACGAATAC+CGG 0.523090 3.4:+97936692 MS.gene064765:CDS
GAATTCACTCTTGACGGATC+CGG 0.524780 3.4:+97936593 MS.gene064765:CDS
TTCGACGTGAGTTTAGTTGA+CGG 0.526291 3.4:+97936629 MS.gene064765:CDS
CCTTGTGGAACTACAAGCAT+TGG 0.527175 3.4:-97936662 None:intergenic
CCTCAGCTTAACAACGGCTC+TGG 0.530822 3.4:+97938199 MS.gene064765:CDS
TCCTGGGGAGGCCGTTTCTG+GGG 0.533325 3.4:+97936455 MS.gene064765:CDS
TGCAACTACACAGTCTGGCC+GGG 0.533665 3.4:+97936344 MS.gene064765:CDS
AGGACAGTGCAGTGAAGATG+TGG 0.536429 3.4:+97935522 MS.gene064765:CDS
CCTTGGGCTGTTGTTAGTGG+AGG 0.540523 3.4:-97936990 None:intergenic
GAGGATGACGTATGCGGTGG+AGG 0.541405 3.4:+97935544 MS.gene064765:CDS
GAGCAAATCCCTGATACAAC+CGG 0.543946 3.4:-97936711 None:intergenic
GGTGATTGATTTGGAGTCGC+CGG 0.547268 3.4:-97936423 None:intergenic
TGCTTGTGAGGCGTTTGGAA+CGG 0.555408 3.4:+97936799 MS.gene064765:CDS
CGAAGTCGACGGAGATGAGG+AGG 0.559700 3.4:+97935498 None:intergenic
CTCTGTTCCCAAGACTCCAC+CGG 0.561123 3.4:+97936485 MS.gene064765:CDS
CTCGTAACCTTAAGCTCTGA+AGG 0.561863 3.4:-97936743 None:intergenic
CACGTTTACATGTGCTTCTG+CGG 0.562492 3.4:+97936943 MS.gene064765:CDS
AAAGTCGAATGCTCCGGGAA+CGG 0.563096 3.4:+97936545 MS.gene064765:CDS
ACGAAACCGGTGGTTGGAAG+CGG 0.564357 3.4:-97936392 None:intergenic
GGCCTCCCCAGGAAGCGGGT+GGG 0.565175 3.4:-97936445 None:intergenic
TTCACTCTTGACGGATCCGG+TGG 0.567093 3.4:+97936596 MS.gene064765:CDS
ATCACCCCACCCGCTTCCTG+GGG 0.571380 3.4:+97936440 MS.gene064765:CDS
GAGGTTATGGTTTACGTCGG+GGG 0.574747 3.4:+97935593 MS.gene064765:CDS
AGAGCTTAAGGTTACGAGCG+TGG 0.575561 3.4:+97936748 MS.gene064765:CDS
TACGAATACCGGTTGTATCA+GGG 0.577024 3.4:+97936703 MS.gene064765:CDS
TGCAGTCAAAAGTCGTGGCA+GGG 0.577535 3.4:+97938139 MS.gene064765:intron
GTGAATTCCACTAAGGTAGC+CGG 0.579436 3.4:-97936578 None:intergenic
TGAAGAACGAAACCGGTGGT+TGG 0.582201 3.4:-97936398 None:intergenic
GTCAAGAGTGAATTCCACTA+AGG 0.584419 3.4:-97936585 None:intergenic
GGACAAAATCCGAAATCAGA+TGG 0.593450 3.4:+97938160 MS.gene064765:CDS
TTACCATCACAACGGCTATG+TGG 0.600620 3.4:+97938305 MS.gene064765:CDS
CCGGGAATTCTCTCCAACGC+CGG 0.602290 3.4:+97936362 MS.gene064765:CDS
CTTACCGGCGATTGTAACTC+CGG 0.603049 3.4:+97936521 MS.gene064765:CDS
GAGCCACATAGCCGTTGTGA+TGG 0.604066 3.4:-97938308 None:intergenic
TGATCAGAGTGAAATATCAT+GGG 0.606552 3.4:+97938246 MS.gene064765:CDS
TTAAGGTTACGAGCGTGGAT+GGG 0.608209 3.4:+97936753 MS.gene064765:CDS
AACAACTCAGAATAACTCGA+AGG 0.608498 3.4:-97936869 None:intergenic
GGTTGTATCAGGGATTTGCT+CGG 0.611595 3.4:+97936713 MS.gene064765:CDS
CCAATGCTTGTAGTTCCACA+AGG 0.616622 3.4:+97936662 MS.gene064765:CDS
TAAGAAGAGAGAAACGGCGG+AGG 0.617678 3.4:+97935574 MS.gene064765:CDS
TTATCACCGGAGCCACCTTG+TGG 0.619692 3.4:-97936677 None:intergenic
ATCGTTTAAGAAGAGAGAAA+CGG 0.619932 3.4:+97935568 MS.gene064765:CDS
GCGGAGGTTATGGTTTACGT+CGG 0.620393 3.4:+97935590 MS.gene064765:CDS
TTTGCCGGAGTTACAATCGC+CGG 0.625708 3.4:-97936525 None:intergenic
ACGGCACAATATTGTTGCAG+CGG 0.630605 3.4:+97936818 MS.gene064765:CDS
GTCGAAGAAATCGAGTCCAC+CGG 0.632997 3.4:-97936612 None:intergenic
CCAGAGCCGTTGTTAAGCTG+AGG 0.634119 3.4:-97938199 None:intergenic
TCTGGCTCAATGGTGTACGT+TGG 0.639261 3.4:+97938217 MS.gene064765:CDS
GGCGTGTAAAAGTGCTTGTG+AGG 0.640993 3.4:+97936787 MS.gene064765:CDS
CGTGGATGGGAAAGAGAGCG+TGG 0.649504 3.4:+97936766 MS.gene064765:CDS
CCTCCACTAACAACAGCCCA+AGG 0.650691 3.4:+97936990 MS.gene064765:CDS
GGTATTCGTACAGTTATCAC+CGG 0.657314 3.4:-97936690 None:intergenic
GGAGGTTATGGTTTACGTCG+GGG 0.665308 3.4:+97935592 MS.gene064765:CDS
AGAAGTGGAAAAGCTGACAC+AGG 0.666411 3.4:-97938330 None:intergenic
TTTCCACACATTGATACACG+TGG 0.670795 3.4:-97938269 None:intergenic
AACTATTCTTACCATCACAA+CGG 0.673194 3.4:+97938297 MS.gene064765:CDS
AGTCTTGGGAACAGAGAGTG+CGG 0.677635 3.4:-97936478 None:intergenic
AATTCCACTAAGGTAGCCGG+TGG 0.682245 3.4:-97936575 None:intergenic
TCATCGCCTCAGCTTAACAA+CGG 0.684947 3.4:+97938193 MS.gene064765:CDS
ACAGTGCAGTGAAGATGTGG+AGG 0.685042 3.4:+97935525 MS.gene064765:CDS
GGGCCACGTGTATCAATGTG+TGG 0.689160 3.4:+97938266 MS.gene064765:CDS
GAAGTCGACGGAGATGAGGA+GGG 0.689755 3.4:+97935499 None:intergenic
ATGCTTGTAGTTCCACAAGG+TGG 0.691545 3.4:+97936665 MS.gene064765:CDS
TACGCGTAGCTATACGCGCG+TGG 0.692773 3.4:-97936905 None:intergenic
GTCGACGGAGATGAGGAGGG+AGG 0.695743 3.4:+97935502 None:intergenic
GTGGAGGATGACGTATGCGG+TGG 0.699451 3.4:+97935541 MS.gene064765:CDS
GTTTAAGAAGAGAGAAACGG+CGG 0.755359 3.4:+97935571 MS.gene064765:CDS
GGATTGAAGAACGAAACCGG+TGG 0.773497 3.4:-97936402 None:intergenic
GATGTGGAGGATGACGTATG+CGG 0.790703 3.4:+97935538 MS.gene064765:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAGAATTAAATAAAACAAT+TGG + chr3.4:97937483-97937502 MS.gene064765:intron 10.0%
!!! AATTGTTTTATTTAATTCTA+TGG - chr3.4:97937484-97937503 None:intergenic 10.0%
!!! TAATTGATTTTATAAAGTAT+AGG - chr3.4:97937452-97937471 None:intergenic 10.0%
!! GATTTAAAAGAATTAAAATC+TGG + chr3.4:97935691-97935710 MS.gene064765:intron 15.0%
!!! ATTATATGGATTAGAATTTT+AGG + chr3.4:97937700-97937719 MS.gene064765:intron 15.0%
!! ATACTTAATCTTTCAATATC+AGG + chr3.4:97936287-97936306 MS.gene064765:intron 20.0%
!! ATGTATCTAATCACATTTAT+AGG - chr3.4:97937338-97937357 None:intergenic 20.0%
!! CTTAAAAATGAGTTTATAGA+GGG - chr3.4:97938013-97938032 None:intergenic 20.0%
!! TAAGTTCTTATATCATTACA+TGG + chr3.4:97936226-97936245 MS.gene064765:intron 20.0%
!! TACTTAATCTTTCAATATCA+GGG + chr3.4:97936288-97936307 MS.gene064765:intron 20.0%
!! TTGAAAGATTAAGTATGATA+AGG - chr3.4:97936283-97936302 None:intergenic 20.0%
!!! AGAACTTAAGAGATTTTATT+AGG + chr3.4:97937897-97937916 MS.gene064765:intron 20.0%
!!! TTAGTCAAATTTCACTTTTT+GGG + chr3.4:97937770-97937789 MS.gene064765:intron 20.0%
!!! TTGATTTTATAAAGTATAGG+TGG - chr3.4:97937449-97937468 None:intergenic 20.0%
!!! TTTAGTCAAATTTCACTTTT+TGG + chr3.4:97937769-97937788 MS.gene064765:intron 20.0%
! ACTTAATCTTTCAATATCAG+GGG + chr3.4:97936289-97936308 MS.gene064765:intron 25.0%
! AGTACTAAAATAATCACCTT+GGG - chr3.4:97937009-97937028 None:intergenic 25.0%
! ATTAAGAAAGAATAAAGAGC+AGG + chr3.4:97935725-97935744 MS.gene064765:intron 25.0%
! CCATATAATCAATTGAGATT+CGG - chr3.4:97937689-97937708 None:intergenic 25.0%
! GCTTAAAAATGAGTTTATAG+AGG - chr3.4:97938014-97938033 None:intergenic 25.0%
! TAGTACTAAAATAATCACCT+TGG - chr3.4:97937010-97937029 None:intergenic 25.0%
! TGTTTCTCACAAAAAGATTA+CGG - chr3.4:97935932-97935951 None:intergenic 25.0%
! TTACAGAAAGAAAAGATTCT+TGG - chr3.4:97938089-97938108 None:intergenic 25.0%
! TTTAGATGCATTTGATTGAT+CGG + chr3.4:97935760-97935779 MS.gene064765:intron 25.0%
!! AGAAAATGAACATGATTTTC+AGG - chr3.4:97935848-97935867 None:intergenic 25.0%
!! GAAAATGAACATGATTTTCA+GGG - chr3.4:97935847-97935866 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG + chr3.4:97937386-97937405 MS.gene064765:intron 25.0%
!!! ATATGGATTAGAATTTTAGG+TGG + chr3.4:97937703-97937722 MS.gene064765:intron 25.0%
!!! TTTTTTCGTATAAATGTGAC+CGG - chr3.4:97937277-97937296 None:intergenic 25.0%
AACTATTCTTACCATCACAA+CGG + chr3.4:97938297-97938316 MS.gene064765:CDS 30.0%
AAGATTACGGAATTGGAATT+TGG - chr3.4:97935919-97935938 None:intergenic 30.0%
ATCGTTTAAGAAGAGAGAAA+CGG + chr3.4:97935568-97935587 MS.gene064765:CDS 30.0%
CATTATCAATTAAGCACATG+TGG + chr3.4:97937729-97937748 MS.gene064765:intron 30.0%
CCGAATCTCAATTGATTATA+TGG + chr3.4:97937686-97937705 MS.gene064765:intron 30.0%
TCACAAAAAGATTACGGAAT+TGG - chr3.4:97935926-97935945 None:intergenic 30.0%
TCTTTCTTCTGTGGTAATTT+GGG - chr3.4:97936141-97936160 None:intergenic 30.0%
TGATCAGAGTGAAATATCAT+GGG + chr3.4:97938246-97938265 MS.gene064765:CDS 30.0%
TGTGATGGTAAGAATAGTTT+GGG - chr3.4:97938296-97938315 None:intergenic 30.0%
TTCGGTATACTTCAATCAAT+TGG - chr3.4:97937671-97937690 None:intergenic 30.0%
TTCTTTCTTCTGTGGTAATT+TGG - chr3.4:97936142-97936161 None:intergenic 30.0%
TTGATCAGAGTGAAATATCA+TGG + chr3.4:97938245-97938264 MS.gene064765:CDS 30.0%
TTGTGATGGTAAGAATAGTT+TGG - chr3.4:97938297-97938316 None:intergenic 30.0%
TTTGAATGAAGTATGAACGT+TGG + chr3.4:97937118-97937137 MS.gene064765:intron 30.0%
! AATTGGAATTTGGAACTGAA+AGG - chr3.4:97935909-97935928 None:intergenic 30.0%
! CAATCAATTGGAGAGTATAA+AGG - chr3.4:97937659-97937678 None:intergenic 30.0%
! TGAGAATCATTTCTGGAAAA+GGG + chr3.4:97935663-97935682 MS.gene064765:intron 30.0%
!! TAGAGAGTACTAAGTACTAA+CGG - chr3.4:97937166-97937185 None:intergenic 30.0%
!!! TTTCACTTTTTGGGATATCA+CGG + chr3.4:97937779-97937798 MS.gene064765:intron 30.0%
AACAACTCAGAATAACTCGA+AGG - chr3.4:97936872-97936891 None:intergenic 35.0%
AAGAGAGAAGAGAGAGAAAA+TGG - chr3.4:97936035-97936054 None:intergenic 35.0%
GATTCTTGGCGTACATTATT+TGG - chr3.4:97938075-97938094 None:intergenic 35.0%
GGAAAATTCTCATGTCTTAC+CGG + chr3.4:97936506-97936525 MS.gene064765:CDS 35.0%
TAACTATTCTGTACTCCATC+CGG + chr3.4:97937255-97937274 MS.gene064765:intron 35.0%
TACAAATCACATACTTCCTC+CGG - chr3.4:97937408-97937427 None:intergenic 35.0%
TCTCCTATAGTCCTATGTAT+GGG + chr3.4:97937563-97937582 MS.gene064765:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr3.4:97935971-97935990 None:intergenic 35.0%
TTAGTGGAATTCACTCTTGA+CGG + chr3.4:97936587-97936606 MS.gene064765:CDS 35.0%
! GAGAAAATTTTGTGTGATCC+TGG - chr3.4:97936108-97936127 None:intergenic 35.0%
! GGTAAGACATGAGAATTTTC+CGG - chr3.4:97936507-97936526 None:intergenic 35.0%
! GTGAGAATCATTTCTGGAAA+AGG + chr3.4:97935662-97935681 MS.gene064765:intron 35.0%
! TTTTGTGAGAAACACTTGTC+TGG + chr3.4:97935938-97935957 MS.gene064765:intron 35.0%
AAAAAGAACTTGTGTGGACC+AGG + chr3.4:97936087-97936106 MS.gene064765:intron 40.0%
AACTCTATGCTTAGCTCGAA+GGG + chr3.4:97937506-97937525 MS.gene064765:intron 40.0%
ACAAATGCAACTACACAGTC+TGG + chr3.4:97936339-97936358 MS.gene064765:CDS 40.0%
CAAAATCTGGTCCCATACAT+AGG - chr3.4:97937577-97937596 None:intergenic 40.0%
CAAACCAAAATTCTTGGTCC+TGG - chr3.4:97935965-97935984 None:intergenic 40.0%
CCTTGCCTTTCTTCAAAATC+TGG - chr3.4:97937590-97937609 None:intergenic 40.0%
CGCGTTAAAGTTACTCAATC+CGG + chr3.4:97935819-97935838 MS.gene064765:intron 40.0%
CGGATTGAGTAACTTTAACG+CGG - chr3.4:97935821-97935840 None:intergenic 40.0%
CTCGAAGGTTTACAAGTGTT+AGG - chr3.4:97936857-97936876 None:intergenic 40.0%
GATGCATTTGATTGATCGGA+CGG + chr3.4:97935764-97935783 MS.gene064765:intron 40.0%
GCAAGTTCTTCTTTCTTCTG+TGG - chr3.4:97936150-97936169 None:intergenic 40.0%
GGACAAAATCCGAAATCAGA+TGG + chr3.4:97938160-97938179 MS.gene064765:CDS 40.0%
GGATTGAGTAACTTTAACGC+GGG - chr3.4:97935820-97935839 None:intergenic 40.0%
GGTATTCGTACAGTTATCAC+CGG - chr3.4:97936693-97936712 None:intergenic 40.0%
GGTGATAACTGTACGAATAC+CGG + chr3.4:97936692-97936711 MS.gene064765:CDS 40.0%
GGTTTATAATGCACTGCATC+TGG + chr3.4:97937540-97937559 MS.gene064765:intron 40.0%
GTCAAGAGTGAATTCCACTA+AGG - chr3.4:97936588-97936607 None:intergenic 40.0%
GTCTCCTATAGTCCTATGTA+TGG + chr3.4:97937562-97937581 MS.gene064765:intron 40.0%
GTGACCAAAAAGAACTTGTG+TGG + chr3.4:97936081-97936100 MS.gene064765:intron 40.0%
GTTTAAGAAGAGAGAAACGG+CGG + chr3.4:97935571-97935590 MS.gene064765:CDS 40.0%
TGAAGAAAGGCAAGGAAAAG+TGG + chr3.4:97937595-97937614 MS.gene064765:intron 40.0%
TTCGACGTGAGTTTAGTTGA+CGG + chr3.4:97936629-97936648 MS.gene064765:CDS 40.0%
TTCGTATAAATGTGACCGGA+TGG - chr3.4:97937273-97937292 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG + chr3.4:97937389-97937408 MS.gene064765:intron 40.0%
TTTCCACACATTGATACACG+TGG - chr3.4:97938272-97938291 None:intergenic 40.0%
! AAGACATGAGAATTTTCCGG+TGG - chr3.4:97936504-97936523 None:intergenic 40.0%
! GTTTTTGCAGTCAAAAGTCG+TGG + chr3.4:97938134-97938153 MS.gene064765:intron 40.0%
! TACGAATACCGGTTGTATCA+GGG + chr3.4:97936703-97936722 MS.gene064765:CDS 40.0%
! TGGTCCACACAAGTTCTTTT+TGG - chr3.4:97936088-97936107 None:intergenic 40.0%
!! CCAGATTTTGAAGAAAGGCA+AGG + chr3.4:97937587-97937606 MS.gene064765:intron 40.0%
!! GAACATGATTTTCAGGGATC+CGG - chr3.4:97935841-97935860 None:intergenic 40.0%
!! TGGGACCAGATTTTGAAGAA+AGG + chr3.4:97937582-97937601 MS.gene064765:intron 40.0%
!!! CAGGACCAAGAATTTTGGTT+TGG + chr3.4:97935963-97935982 MS.gene064765:intron 40.0%
ACGGCACAATATTGTTGCAG+CGG + chr3.4:97936818-97936837 MS.gene064765:CDS 45.0%
AGAAGTGGAAAAGCTGACAC+AGG - chr3.4:97938333-97938352 None:intergenic 45.0%
AGAATAAAGAGCAGGACACG+TGG + chr3.4:97935733-97935752 MS.gene064765:intron 45.0%
ATGCTTGTAGTTCCACAAGG+TGG + chr3.4:97936665-97936684 MS.gene064765:CDS 45.0%
CACGTTTACATGTGCTTCTG+CGG + chr3.4:97936943-97936962 MS.gene064765:CDS 45.0%
CATTTGATTGATCGGACGGA+CGG + chr3.4:97935768-97935787 MS.gene064765:intron 45.0%
CCAATGCTTGTAGTTCCACA+AGG + chr3.4:97936662-97936681 MS.gene064765:CDS 45.0%
CCTTGTGGAACTACAAGCAT+TGG - chr3.4:97936665-97936684 None:intergenic 45.0%
GAACTCTATGCTTAGCTCGA+AGG + chr3.4:97937505-97937524 MS.gene064765:intron 45.0%
GAGCAAATCCCTGATACAAC+CGG - chr3.4:97936714-97936733 None:intergenic 45.0%
GAGTCACTGCCATCTGATTT+CGG - chr3.4:97938172-97938191 None:intergenic 45.0%
GCTCGAAGGGCTACTAATAA+TGG + chr3.4:97937519-97937538 MS.gene064765:intron 45.0%
GGTCCCATACATAGGACTAT+AGG - chr3.4:97937569-97937588 None:intergenic 45.0%
GTGAATTCCACTAAGGTAGC+CGG - chr3.4:97936581-97936600 None:intergenic 45.0%
TCATCGCCTCAGCTTAACAA+CGG + chr3.4:97938193-97938212 MS.gene064765:CDS 45.0%
TTAAGGTTACGAGCGTGGAT+GGG + chr3.4:97936753-97936772 MS.gene064765:CDS 45.0%
TTACCATCACAACGGCTATG+TGG + chr3.4:97938305-97938324 MS.gene064765:CDS 45.0%
! ACCGGTTTCGTTCTTCAATC+CGG + chr3.4:97936404-97936423 MS.gene064765:CDS 45.0%
! AGAATTTTCCGGTGGAGTCT+TGG - chr3.4:97936496-97936515 None:intergenic 45.0%
! CTCGTAACCTTAAGCTCTGA+AGG - chr3.4:97936746-97936765 None:intergenic 45.0%
! GAATTCACTCTTGACGGATC+CGG + chr3.4:97936593-97936612 MS.gene064765:CDS 45.0%
! GAATTTTCCGGTGGAGTCTT+GGG - chr3.4:97936495-97936514 None:intergenic 45.0%
! GGTTGTATCAGGGATTTGCT+CGG + chr3.4:97936713-97936732 MS.gene064765:CDS 45.0%
! GTACGAATACCGGTTGTATC+AGG + chr3.4:97936702-97936721 MS.gene064765:CDS 45.0%
! TGGACCAGGACCAAGAATTT+TGG + chr3.4:97935958-97935977 MS.gene064765:intron 45.0%
!! AAAAGTGCTTGTGAGGCGTT+TGG + chr3.4:97936794-97936813 MS.gene064765:CDS 45.0%
!!! TAATTTAATGTTTTAAAAAA+CGG - chr3.4:97937237-97937256 None:intergenic 5.0%
AAAGTCGAATGCTCCGGGAA+CGG + chr3.4:97936545-97936564 MS.gene064765:CDS 50.0%
AATTCCACTAAGGTAGCCGG+TGG - chr3.4:97936578-97936597 None:intergenic 50.0%
ACAGTGCAGTGAAGATGTGG+AGG + chr3.4:97935525-97935544 MS.gene064765:CDS 50.0%
AGAGCTTAAGGTTACGAGCG+TGG + chr3.4:97936748-97936767 MS.gene064765:CDS 50.0%
AGGACAGTGCAGTGAAGATG+TGG + chr3.4:97935522-97935541 MS.gene064765:CDS 50.0%
AGTCTTGGGAACAGAGAGTG+CGG - chr3.4:97936481-97936500 None:intergenic 50.0%
ATGCAACTACACAGTCTGGC+CGG + chr3.4:97936343-97936362 MS.gene064765:CDS 50.0%
ATGGTTTACGTCGGGGGTAA+AGG + chr3.4:97935599-97935618 MS.gene064765:intron 50.0%
CGGAGGTTATGGTTTACGTC+GGG + chr3.4:97935591-97935610 MS.gene064765:CDS 50.0%
CTTAAGGTTACGAGCGTGGA+TGG + chr3.4:97936752-97936771 MS.gene064765:CDS 50.0%
CTTACCGGCGATTGTAACTC+CGG + chr3.4:97936521-97936540 MS.gene064765:CDS 50.0%
GAGAAACACTTGTCTGGACC+AGG + chr3.4:97935944-97935963 MS.gene064765:intron 50.0%
GAGGTTATGGTTTACGTCGG+GGG + chr3.4:97935593-97935612 MS.gene064765:CDS 50.0%
GATGTGGAGGATGACGTATG+CGG + chr3.4:97935538-97935557 MS.gene064765:CDS 50.0%
GCCGGATTGAAGAACGAAAC+CGG - chr3.4:97936408-97936427 None:intergenic 50.0%
GCGGAGGTTATGGTTTACGT+CGG + chr3.4:97935590-97935609 MS.gene064765:CDS 50.0%
GCGGCAGTGAGAATCATTTC+TGG + chr3.4:97935656-97935675 MS.gene064765:intron 50.0%
GGAGGTTATGGTTTACGTCG+GGG + chr3.4:97935592-97935611 MS.gene064765:CDS 50.0%
GGATTGAAGAACGAAACCGG+TGG - chr3.4:97936405-97936424 None:intergenic 50.0%
GTCGAAGAAATCGAGTCCAC+CGG - chr3.4:97936615-97936634 None:intergenic 50.0%
TAAGAAGAGAGAAACGGCGG+AGG + chr3.4:97935574-97935593 MS.gene064765:CDS 50.0%
TCACCTTGGGCTGTTGTTAG+TGG - chr3.4:97936996-97937015 None:intergenic 50.0%
TGAAGAACGAAACCGGTGGT+TGG - chr3.4:97936401-97936420 None:intergenic 50.0%
TGCAGTCAAAAGTCGTGGCA+GGG + chr3.4:97938139-97938158 MS.gene064765:intron 50.0%
TTACGTCGGGGGTAAAGGAA+TGG + chr3.4:97935604-97935623 MS.gene064765:intron 50.0%
TTGCAGTCAAAAGTCGTGGC+AGG + chr3.4:97938138-97938157 MS.gene064765:intron 50.0%
TTTGCCGGAGTTACAATCGC+CGG - chr3.4:97936528-97936547 None:intergenic 50.0%
! TAACAACGGCTCTGGCTCAA+TGG + chr3.4:97938207-97938226 MS.gene064765:CDS 50.0%
! TCTGGCTCAATGGTGTACGT+TGG + chr3.4:97938217-97938236 MS.gene064765:CDS 50.0%
! TGCTTGTGAGGCGTTTGGAA+CGG + chr3.4:97936799-97936818 MS.gene064765:CDS 50.0%
!! GGCGTGTAAAAGTGCTTGTG+AGG + chr3.4:97936787-97936806 MS.gene064765:CDS 50.0%
!! GGTGATTGATTTGGAGTCGC+CGG - chr3.4:97936426-97936445 None:intergenic 50.0%
ACGAAACCGGTGGTTGGAAG+CGG - chr3.4:97936395-97936414 None:intergenic 55.0%
AGCGGGTGGGGTGATTGATT+TGG - chr3.4:97936435-97936454 None:intergenic 55.0%
CCAGAGCCGTTGTTAAGCTG+AGG - chr3.4:97938202-97938221 None:intergenic 55.0%
CCTCAGCTTAACAACGGCTC+TGG + chr3.4:97938199-97938218 MS.gene064765:CDS 55.0%
CCTCCACTAACAACAGCCCA+AGG + chr3.4:97936990-97937009 MS.gene064765:CDS 55.0%
CCTTGGGCTGTTGTTAGTGG+AGG - chr3.4:97936993-97937012 None:intergenic 55.0%
CGCGTGTCCTTCAGAGCTTA+AGG + chr3.4:97936736-97936755 MS.gene064765:CDS 55.0%
CTCTGTTCCCAAGACTCCAC+CGG + chr3.4:97936485-97936504 MS.gene064765:CDS 55.0%
GAGAGAAACGGCGGAGGTTA+TGG + chr3.4:97935580-97935599 MS.gene064765:CDS 55.0%
GAGCCACATAGCCGTTGTGA+TGG - chr3.4:97938311-97938330 None:intergenic 55.0%
GATCGGACGGACGGAATTGA+GGG + chr3.4:97935777-97935796 MS.gene064765:intron 55.0%
GGCTCAATGGTGTACGTTGG+TGG + chr3.4:97938220-97938239 MS.gene064765:CDS 55.0%
GGGCCACGTGTATCAATGTG+TGG + chr3.4:97938266-97938285 MS.gene064765:CDS 55.0%
GTAGTTCCACAAGGTGGCTC+CGG + chr3.4:97936671-97936690 MS.gene064765:CDS 55.0%
TATTGTTGCAGCGGCGCGTA+TGG + chr3.4:97936827-97936846 MS.gene064765:CDS 55.0%
TCACTGCCGCCAGCATATAG+AGG - chr3.4:97935646-97935665 None:intergenic 55.0%
TCCGGCAAAGTCGAATGCTC+CGG + chr3.4:97936539-97936558 MS.gene064765:CDS 55.0%
TGATCGGACGGACGGAATTG+AGG + chr3.4:97935776-97935795 MS.gene064765:intron 55.0%
TGCAACTACACAGTCTGGCC+GGG + chr3.4:97936344-97936363 MS.gene064765:CDS 55.0%
TTATCACCGGAGCCACCTTG+TGG - chr3.4:97936680-97936699 None:intergenic 55.0%
! AACACCACCGGCTACCTTAG+TGG + chr3.4:97936571-97936590 MS.gene064765:CDS 55.0%
! TTCACTCTTGACGGATCCGG+TGG + chr3.4:97936596-97936615 MS.gene064765:CDS 55.0%
!! GGGTAAAGGAATGGTGGTGG+TGG + chr3.4:97935613-97935632 MS.gene064765:intron 55.0%
AATCACCCCACCCGCTTCCT+GGG + chr3.4:97936439-97936458 MS.gene064765:CDS 60.0%
CCGGCAAAGTCGAATGCTCC+GGG + chr3.4:97936540-97936559 MS.gene064765:CDS 60.0%
CCGGGAATTCTCTCCAACGC+CGG + chr3.4:97936362-97936381 MS.gene064765:CDS 60.0%
CGGGGGTAAAGGAATGGTGG+TGG + chr3.4:97935610-97935629 MS.gene064765:intron 60.0%
CGTCGGGGGTAAAGGAATGG+TGG + chr3.4:97935607-97935626 MS.gene064765:intron 60.0%
CGTGGATGGGAAAGAGAGCG+TGG + chr3.4:97936766-97936785 MS.gene064765:CDS 60.0%
GAGGATGACGTATGCGGTGG+AGG + chr3.4:97935544-97935563 MS.gene064765:CDS 60.0%
GCGCTGCCTCTATATGCTGG+CGG + chr3.4:97935637-97935656 MS.gene064765:intron 60.0%
GGTGCGCTGCCTCTATATGC+TGG + chr3.4:97935634-97935653 MS.gene064765:intron 60.0%
GTGGAGGATGACGTATGCGG+TGG + chr3.4:97935541-97935560 MS.gene064765:CDS 60.0%
GTTGCACCGCTTCCAACCAC+CGG + chr3.4:97936386-97936405 MS.gene064765:CDS 60.0%
TACGCGTAGCTATACGCGCG+TGG - chr3.4:97936908-97936927 None:intergenic 60.0%
TTCCTGGGGAGGCCGTTTCT+GGG + chr3.4:97936454-97936473 MS.gene064765:CDS 60.0%
! AGAGAGTGCGGCCCCAGAAA+CGG - chr3.4:97936469-97936488 None:intergenic 60.0%
! CCCGGAGCATTCGACTTTGC+CGG - chr3.4:97936543-97936562 None:intergenic 60.0%
! CCGGCGTTGGAGAGAATTCC+CGG - chr3.4:97936365-97936384 None:intergenic 60.0%
AAACGGCCTCCCCAGGAAGC+GGG - chr3.4:97936452-97936471 None:intergenic 65.0%
ATCACCCCACCCGCTTCCTG+GGG + chr3.4:97936440-97936459 MS.gene064765:CDS 65.0%
CAATCACCCCACCCGCTTCC+TGG + chr3.4:97936438-97936457 MS.gene064765:CDS 65.0%
CTTCCTGGGGAGGCCGTTTC+TGG + chr3.4:97936453-97936472 MS.gene064765:CDS 65.0%
GAAACGGCCTCCCCAGGAAG+CGG - chr3.4:97936453-97936472 None:intergenic 65.0%
GGTTGGAAGCGGTGCAACGC+CGG - chr3.4:97936384-97936403 None:intergenic 65.0%
TCCTGGGGAGGCCGTTTCTG+GGG + chr3.4:97936455-97936474 MS.gene064765:CDS 65.0%
AAGCGGTGCAACGCCGGCGT+TGG - chr3.4:97936378-97936397 None:intergenic 70.0%
CGGGAACGGCGCAACACCAC+CGG + chr3.4:97936559-97936578 MS.gene064765:CDS 70.0%
!! CGGTGGTGTTGCGCCGTTCC+CGG - chr3.4:97936561-97936580 None:intergenic 70.0%
ACCCCACCCGCTTCCTGGGG+AGG + chr3.4:97936443-97936462 MS.gene064765:CDS 75.0%
GCCCCAGAAACGGCCTCCCC+AGG - chr3.4:97936459-97936478 None:intergenic 75.0%
GCCTCCCCAGGAAGCGGGTG+GGG - chr3.4:97936447-97936466 None:intergenic 75.0%
GGCCTCCCCAGGAAGCGGGT+GGG - chr3.4:97936448-97936467 None:intergenic 75.0%
! CGGCCTCCCCAGGAAGCGGG+TGG - chr3.4:97936449-97936468 None:intergenic 80.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 97935512 97938354 97935512 ID=MS.gene064765
chr3.4 mRNA 97935512 97938354 97935512 ID=MS.gene064765.t1;Parent=MS.gene064765
chr3.4 exon 97935512 97935614 97935512 ID=MS.gene064765.t1.exon1;Parent=MS.gene064765.t1
chr3.4 CDS 97935512 97935614 97935512 ID=cds.MS.gene064765.t1;Parent=MS.gene064765.t1
chr3.4 exon 97936309 97937011 97936309 ID=MS.gene064765.t1.exon2;Parent=MS.gene064765.t1
chr3.4 CDS 97936309 97937011 97936309 ID=cds.MS.gene064765.t1;Parent=MS.gene064765.t1
chr3.4 exon 97938144 97938354 97938144 ID=MS.gene064765.t1.exon3;Parent=MS.gene064765.t1
chr3.4 CDS 97938144 97938354 97938144 ID=cds.MS.gene064765.t1;Parent=MS.gene064765.t1
Gene Sequence

>MS.gene064765

ATGAGGAGGGAGGACAGTGCAGTGAAGATGTGGAGGATGACGTATGCGGTGGAGGAATCGTTTAAGAAGAGAGAAACGGCGGAGGTTATGGTTTACGTCGGGGGTAAAGGAATGGTGGTGGTGGTGCGCTGCCTCTATATGCTGGCGGCAGTGAGAATCATTTCTGGAAAAGGGTTACAGATTTAAAAGAATTAAAATCTGGTATAAAAAAAAATTAAGAAAGAATAAAGAGCAGGACACGTGGCTTATTTAGATGCATTTGATTGATCGGACGGACGGAATTGAGGGAAAGTCACATGACTTTGCCCGCGTTAAAGTTACTCAATCCGGATCCCTGAAAATCATGTTCATTTTCTGTTAAATTATTGTCTATATATAACTTAAGTTAATGTTACCTTTCAGTTCCAAATTCCAATTCCGTAATCTTTTTGTGAGAAACACTTGTCTGGACCAGGACCAAGAATTTTGGTTTGGTCACACACACAAGTTTTTTCTTTCTCTCTCTTCTCTTCTCTCTTCTCCATTTTCTCTCTCTTCTCTCTTCTCTCTCTTCTCTTTTTTCTCTTTGTGTGACCAAAAAGAACTTGTGTGGACCAGGATCACACAAAATTTTCTCTCTTTTTGTTCCCAAATTACCACAGAAGAAAGAAGAACTTGCATAACTTAGCTTCTTCTTCTTCTTCTTCTTCTTATAAAGTATCTAATTAATTAAGTTAAGTTCTTATATCATTACATGGATCAACTAAGTACTAAATTATTTTCAATTTTCCTTATCATACTTAATCTTTCAATATCAGGGGTATTATCAACAACATTCACACTCGTTAACAAATGCAACTACACAGTCTGGCCGGGAATTCTCTCCAACGCCGGCGTTGCACCGCTTCCAACCACCGGTTTCGTTCTTCAATCCGGCGACTCCAAATCAATCACCCCACCCGCTTCCTGGGGAGGCCGTTTCTGGGGCCGCACTCTCTGTTCCCAAGACTCCACCGGAAAATTCTCATGTCTTACCGGCGATTGTAACTCCGGCAAAGTCGAATGCTCCGGGAACGGCGCAACACCACCGGCTACCTTAGTGGAATTCACTCTTGACGGATCCGGTGGACTCGATTTCTTCGACGTGAGTTTAGTTGACGGTTACAACGTTCCAATGCTTGTAGTTCCACAAGGTGGCTCCGGTGATAACTGTACGAATACCGGTTGTATCAGGGATTTGCTCGGCGCGTGTCCTTCAGAGCTTAAGGTTACGAGCGTGGATGGGAAAGAGAGCGTGGCGTGTAAAAGTGCTTGTGAGGCGTTTGGAACGGCACAATATTGTTGCAGCGGCGCGTATGGTTCACCTAACACTTGTAAACCTTCGAGTTATTCTGAGTTGTTTAAAAGTGCTTGTCCACGCGCGTATAGCTACGCGTACGACGATAAGACAAGCACGTTTACATGTGCTTCTGCGGCTGAATACACAATCACTTTTTGCTCCTCCACTAACAACAGCCCAAGGTGATTATTTTAGTACTAGTAGTATTTATTTACTTTTATTTAATTTTTCACATACTTACTTAAATGATTTTTATTTACTTTACTTTGACGTTAGTAATTTTTTTTTTTTGAATGAAGTATGAACGTTGGATGCAGAAATGATTGAGATTAACCGTTAGTACTTAGTACTCTCTATTAGTCTTACGTTACAATTTTTTAGTTCTAGAGCGACAAAATTACTAACCGTTTTTTAAAACATTAAATTAACTATTCTGTACTCCATCCGGTCACATTTATACGAAAAAAACAAATTTTTAGATACATTGAATAATTAATGTATCTAACCTATAAATGTGATTAGATACATTAATTATTCAATGTATCTAAAAAATCATTTTTTGCTTATAAATGTGACCGGAGGAAGTATGTGATTTGTAATGTCAAAACTTCTTGTTCCACCTATACTTTATAAAATCAATTATCAGTGCTACCATAGAATTAAATAAAACAATTGGAACTCTATGCTTAGCTCGAAGGGCTACTAATAATGGTTTATAATGCACTGCATCTGGTCTCCTATAGTCCTATGTATGGGACCAGATTTTGAAGAAAGGCAAGGAAAAGTGGTTTATACTTAATTTCTTTTTTTTTTGTTAAAAAGAAGTCCTTTATACTCTCCAATTGATTGAAGTATACCGAATCTCAATTGATTATATGGATTAGAATTTTAGGTGGATACATTATCAATTAAGCACATGTGGTACACAGTACACTCATCTTTAGTCAAATTTCACTTTTTGGGATATCACGGCTAGTGATCTGATTTAATAACTTTTTTTACATGAATTGACGCTAAACTAGTAGTACAATTCAAGAATCAAGATAGAAAAAAAAAATGTTCATACTAGAACTTAAGAGATTTTATTAGGTTTTTTTAATGCTACTCTTTCTAAACTCACTTCACTCTTGTTAAAATCTTCATGTTGAACTTAAATTATCTTGTAAATGAGATGAAATGTCCCTCTATAAACTCATTTTTAAGCTGATTTCAAGTTTTATTATACACGAGTCTTGAGTTTTTCCAAATAATGTACGCCAAGAATCTTTTCTTTCTGTAATGCAAATTAATGTTGTTGATAATTTGTTTTTGCAGTCAAAAGTCGTGGCAGGGACAAAATCCGAAATCAGATGGCAGTGACTCATCATCGCCTCAGCTTAACAACGGCTCTGGCTCAATGGTGTACGTTGGTGGCTTTGATCAGAGTGAAATATCATGGGCCACGTGTATCAATGTGTGGAAATCCCAAACTATTCTTACCATCACAACGGCTATGTGGCTCCTGTGTCAGCTTTTCCACTTCTAA
Protein sequence

>MS.gene064765.t1

MRREDSAVKMWRMTYAVEESFKKRETAEVMVYVGGVLSTTFTLVNKCNYTVWPGILSNAGVAPLPTTGFVLQSGDSKSITPPASWGGRFWGRTLCSQDSTGKFSCLTGDCNSGKVECSGNGATPPATLVEFTLDGSGGLDFFDVSLVDGYNVPMLVVPQGGSGDNCTNTGCIRDLLGACPSELKVTSVDGKESVACKSACEAFGTAQYCCSGAYGSPNTCKPSSYSELFKSACPRAYSYAYDDKTSTFTCASAAEYTITFCSSTNNSPSQKSWQGQNPKSDGSDSSSPQLNNGSGSMVYVGGFDQSEISWATCINVWKSQTILTITTAMWLLCQLFHF