AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71046

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71046.t1 MTR_3g079750 98.565 627 9 0 1 627 1 627 0.0 1277
MS.gene71046.t1 MTR_6g028090 76.849 622 144 0 1 622 1 622 0.0 1018
MS.gene71046.t1 MTR_6g028100 75.559 626 153 0 1 626 1 626 0.0 1005
MS.gene71046.t1 MTR_6g028120 76.617 603 141 0 20 622 1 603 0.0 982
MS.gene71046.t1 MTR_2g030000 74.318 623 156 2 4 622 2 624 0.0 980
MS.gene71046.t1 MTR_6g028110 74.003 627 162 1 1 626 1 627 0.0 976
MS.gene71046.t1 MTR_6g028110 74.003 627 162 1 1 626 1 627 0.0 976
MS.gene71046.t1 MTR_7g086030 68.421 627 197 1 1 626 1 627 0.0 910
MS.gene71046.t1 MTR_7g086030 70.000 600 180 0 27 626 3 602 0.0 905
MS.gene71046.t1 MTR_3g462820 57.591 606 244 4 22 620 16 615 0.0 717
MS.gene71046.t1 MTR_5g069800 54.500 600 268 4 28 623 5 603 0.0 678
MS.gene71046.t1 MTR_5g069740 54.167 600 258 5 28 623 5 591 0.0 662
MS.gene71046.t1 MTR_7g086010 63.924 474 158 3 1 463 1 472 0.0 611
MS.gene71046.t1 MTR_5g062650 26.615 650 357 26 37 627 59 647 2.12e-42 164
MS.gene71046.t1 MTR_5g062370 28.308 650 347 28 35 627 57 644 3.71e-42 163
MS.gene71046.t1 MTR_3g074060 26.269 670 373 28 16 627 30 636 6.32e-42 162
MS.gene71046.t1 MTR_5g062320 27.106 653 351 28 35 627 55 642 3.58e-41 160
MS.gene71046.t1 MTR_4g094285 27.287 623 351 26 28 612 54 612 1.51e-40 158
MS.gene71046.t1 MTR_5g062430 26.829 656 349 28 35 627 57 644 3.85e-40 157
MS.gene71046.t1 MTR_5g062370 28.765 591 319 26 35 585 57 585 2.05e-38 150
MS.gene71046.t1 MTR_2g008240 26.442 624 355 26 28 612 55 613 2.64e-35 142
MS.gene71046.t1 MTR_2g034720 24.852 676 378 29 11 621 11 621 2.94e-34 139
MS.gene71046.t1 MTR_7g109390 25.753 598 346 27 32 595 46 579 9.50e-31 128
MS.gene71046.t1 MTR_1g106860 25.509 639 360 30 38 621 48 625 3.42e-30 127
MS.gene71046.t1 MTR_5g030860 25.709 564 350 28 97 612 66 608 1.45e-27 119
MS.gene71046.t1 MTR_1g087240 23.668 638 369 28 8 595 5 574 2.87e-25 111
MS.gene71046.t1 MTR_5g069850 56.250 48 21 0 554 601 4 51 1.59e-14 68.9
MS.gene71046.t1 MTR_3g079770 89.655 29 3 0 598 626 12 40 3.42e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71046.t1 AT5G20950 78.049 615 133 2 8 622 85 697 0.0 989
MS.gene71046.t1 AT5G20950 78.049 615 133 2 8 622 7 619 0.0 986
MS.gene71046.t1 AT5G20950 78.049 615 133 2 8 622 7 619 0.0 986
MS.gene71046.t1 AT5G04885 67.628 624 199 3 1 622 18 640 0.0 914
MS.gene71046.t1 AT5G04885 67.628 624 199 3 1 622 1 623 0.0 914
MS.gene71046.t1 AT5G04885 67.628 624 199 3 1 622 1 623 0.0 914
MS.gene71046.t1 AT5G20940 75.671 596 142 2 27 622 31 623 0.0 907
MS.gene71046.t1 AT3G47000 59.296 597 240 3 28 622 10 605 0.0 745
MS.gene71046.t1 AT3G47040 58.696 598 244 3 28 623 10 606 0.0 730
MS.gene71046.t1 AT3G62710 56.250 656 242 12 1 622 6 650 0.0 719
MS.gene71046.t1 AT3G47010 57.429 599 252 3 28 624 11 608 0.0 716
MS.gene71046.t1 AT3G47040 56.340 623 244 4 28 623 10 631 0.0 716
MS.gene71046.t1 AT3G47010 57.095 599 253 4 28 624 11 607 0.0 706
MS.gene71046.t1 AT3G47050 56.639 595 253 4 28 620 10 601 0.0 691
MS.gene71046.t1 AT3G47040 54.358 631 252 7 28 623 10 639 0.0 677
MS.gene71046.t1 AT3G47000 60.829 434 170 0 28 461 10 443 0.0 574
MS.gene71046.t1 AT3G47040 60.138 434 173 0 28 461 10 443 0.0 556
MS.gene71046.t1 AT3G47010 58.756 434 179 0 28 461 11 444 0.0 547
MS.gene71046.t1 AT3G47000 57.576 429 179 3 196 622 1 428 1.32e-176 508
MS.gene71046.t1 AT3G47010 54.756 431 191 4 196 624 1 429 1.95e-164 477
MS.gene71046.t1 AT3G47050 55.256 371 166 0 28 398 10 380 1.06e-149 438
MS.gene71046.t1 AT5G64570 25.076 654 378 26 4 605 16 609 5.48e-37 147
MS.gene71046.t1 AT5G49360 26.208 683 372 33 4 621 12 627 1.20e-35 143
MS.gene71046.t1 AT5G09730 25.653 651 366 27 9 604 11 598 1.76e-35 143
MS.gene71046.t1 AT1G02640 25.581 645 368 28 27 621 43 625 8.97e-35 141
MS.gene71046.t1 AT5G64570 24.608 638 371 25 4 591 16 593 5.71e-33 134
MS.gene71046.t1 AT5G10560 27.110 557 327 26 97 595 66 601 7.81e-33 135
MS.gene71046.t1 AT3G19620 26.101 636 359 30 38 621 51 627 6.48e-32 132
MS.gene71046.t1 AT5G64570 26.947 475 293 20 158 605 4 451 4.92e-31 129
MS.gene71046.t1 AT1G78060 26.534 603 341 27 33 595 43 583 1.82e-29 124

Find 157 sgRNAs with CRISPR-Local

Find 282 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATGAGGTTTCAATATT+TGG 0.137122 3.3:-67492542 None:intergenic
CTTGGGATTCCAATGATTTA+TGG 0.138672 3.3:+67489177 MS.gene71046:CDS
CTTGTGGCTGCATGGCTTCC+TGG 0.170355 3.3:+67492355 MS.gene71046:CDS
GCATCGTCAATCCTGCTAAT+TGG 0.195190 3.3:-67491324 None:intergenic
AGGAAGTCATGCTGACAATT+TGG 0.215763 3.3:+67491649 MS.gene71046:CDS
AATGAACTCAGTAAAGTTAT+AGG 0.257235 3.3:-67491265 None:intergenic
TGTGTAGTTGTTCTCGTCAC+TGG 0.269250 3.3:+67492289 MS.gene71046:CDS
CCTCTATTTCCATTTGGATT+TGG 0.273183 3.3:+67492502 MS.gene71046:CDS
TGCTGAGACTTGGGTGAAAA+TGG 0.299375 3.3:+67489119 MS.gene71046:CDS
TTGGGATTCCAATGATTTAT+GGG 0.310059 3.3:+67489178 MS.gene71046:CDS
CTTTGAATTCACTGGCAAAC+TGG 0.319753 3.3:+67492417 MS.gene71046:CDS
AAGTACTTGGTCATGGCTTC+AGG 0.324560 3.3:-67488660 None:intergenic
TCAAGAACAAACTGCGGTTC+AGG 0.331109 3.3:+67490897 MS.gene71046:CDS
CTTCTATTCAATGGCACCTT+AGG 0.337123 3.3:-67488558 None:intergenic
GCCTCAAAAGTCTTGGTTGC+AGG 0.340957 3.3:+67491629 MS.gene71046:CDS
GAGTAGATAAAGCTGCATTT+TGG 0.345290 3.3:-67489152 None:intergenic
TTGTAGACAACTTCAGTTGC+AGG 0.355816 3.3:-67492106 None:intergenic
AAGGGAACTCCCTTTGTTGC+TGG 0.360394 3.3:+67489782 MS.gene71046:CDS
TTTGATGAGTAGAATGACTT+TGG 0.365060 3.3:+67488590 MS.gene71046:CDS
AAACCTTATGCTGAAACATT+TGG 0.369639 3.3:+67492196 MS.gene71046:CDS
TCACCAAATGTTTCAGCATA+AGG 0.371613 3.3:-67492199 None:intergenic
TTTCCTCACAATGTTGGGCT+TGG 0.372161 3.3:+67489246 MS.gene71046:CDS
CATCGTCAATCCTGCTAATT+GGG 0.372190 3.3:-67491323 None:intergenic
TGTTTATCGCCAACATTCAT+TGG 0.380197 3.3:-67492472 None:intergenic
GAAATTATTCCTGGTCTTCA+AGG 0.380325 3.3:+67489737 MS.gene71046:CDS
TATGATCCTCTATTTCCATT+TGG 0.381581 3.3:+67492496 MS.gene71046:CDS
AACAAAGGGAGTTCCCTTCC+TGG 0.382778 3.3:-67489777 None:intergenic
GCAGCTTTATCTACTCCTCT+TGG 0.387602 3.3:+67489159 MS.gene71046:CDS
ATGAACTCAGTAAAGTTATA+GGG 0.395590 3.3:-67491264 None:intergenic
GGAAGTCATGCTGACAATTT+GGG 0.395920 3.3:+67491650 MS.gene71046:CDS
GAGATATTCCTGGCAATTCC+AGG 0.396979 3.3:+67489759 MS.gene71046:CDS
ACTATGACTGAAATTATTCC+TGG 0.401214 3.3:+67489728 MS.gene71046:CDS
TCTAAGTCTCGCAAACCAAT+TGG 0.406773 3.3:+67491407 MS.gene71046:CDS
TCTTTGATTCTTCTATTCAA+TGG 0.409302 3.3:-67488567 None:intergenic
CCAAATCCAAATGGAAATAG+AGG 0.410646 3.3:-67492502 None:intergenic
CAGCTTTATCTACTCCTCTT+GGG 0.415243 3.3:+67489160 MS.gene71046:CDS
GTTGAAGCTGGTGTCAGTGC+TGG 0.417130 3.3:+67491107 MS.gene71046:CDS
TCAGCAGATGCCTTCTCAGC+TGG 0.421939 3.3:-67489102 None:intergenic
GACTTGATAAAACTAGCATC+TGG 0.430500 3.3:-67492136 None:intergenic
ATTGTTCTCATTGATACCCT+TGG 0.433255 3.3:-67490726 None:intergenic
AATGTACCTTGCTACCCAAT+TGG 0.438570 3.3:-67491422 None:intergenic
TGTTCTTTACTTGAAAGGTT+AGG 0.439033 3.3:-67491293 None:intergenic
TATGGGATAGATGCTGTTCA+TGG 0.440549 3.3:+67489195 MS.gene71046:CDS
AATATTGTTCTTTACTTGAA+AGG 0.442284 3.3:-67491298 None:intergenic
TTCTTATGCCATAGTTATTG+TGG 0.447834 3.3:+67492168 MS.gene71046:CDS
ATTACTTGGCAGGGACTTAG+TGG 0.448542 3.3:+67491695 MS.gene71046:CDS
GCATCTATCCCATAAATCAT+TGG 0.452813 3.3:-67489186 None:intergenic
ATGGTGCTTGGACCTGGCTC+AGG 0.452932 3.3:-67492241 None:intergenic
CAAGAACAAACTGCGGTTCA+GGG 0.456249 3.3:+67490898 MS.gene71046:CDS
GCACTGGAAGTTAGAGCTAC+TGG 0.456955 3.3:+67489515 MS.gene71046:CDS
ATACATGGAGCAAACGCATA+TGG 0.459037 3.3:-67489542 None:intergenic
AGAAGGCATCTGCTGAGACT+TGG 0.460715 3.3:+67489109 MS.gene71046:CDS
TATGGTGACTTTGAATTCAC+TGG 0.461713 3.3:+67492409 MS.gene71046:CDS
CATGAGGAGGAGAGGTAATC+CGG 0.462465 3.3:-67491067 None:intergenic
TGAGGTTTCAATATTTGGTA+AGG 0.463136 3.3:-67492537 None:intergenic
TGTTCTCGTCACTGGGCGTC+CGG 0.463651 3.3:+67492297 MS.gene71046:CDS
ATCTCCTACACTAGCTGGAA+TGG 0.467244 3.3:+67490833 MS.gene71046:CDS
GTGTAGTTGTTCTCGTCACT+GGG 0.467358 3.3:+67492290 MS.gene71046:CDS
TTCTTGGGAAGGGGAAGCAG+TGG 0.467812 3.3:-67491605 None:intergenic
ATACTATGACTCAATTATCA+AGG 0.467916 3.3:+67490793 MS.gene71046:CDS
ACACCTTGGCCTTCAGTGCC+AGG 0.468125 3.3:-67492373 None:intergenic
GCATGGCTTCCTGGCACTGA+AGG 0.468764 3.3:+67492364 MS.gene71046:CDS
GGTCTTCAAGGAGATATTCC+TGG 0.478810 3.3:+67489749 MS.gene71046:CDS
ACAATATTATCCCAATTAGC+AGG 0.481409 3.3:+67491313 MS.gene71046:CDS
GAGCAGGGAGTGTGTTGAGT+GGG 0.484068 3.3:+67489067 MS.gene71046:intron
TGTCAGTGCTGGAATTGATA+TGG 0.484901 3.3:+67491118 MS.gene71046:CDS
AGCTTCTTTACCGCAATACA+TGG 0.484997 3.3:-67489557 None:intergenic
TTGGTGATGGTGCTTGGACC+TGG 0.485332 3.3:-67492247 None:intergenic
AGCAGGGAGTGTGTTGAGTG+GGG 0.485367 3.3:+67489068 MS.gene71046:intron
GATGAGTAGAATGACTTTGG+AGG 0.485718 3.3:+67488593 MS.gene71046:CDS
CAAGAAAGCCTCAAAAGTCT+TGG 0.487758 3.3:+67491622 MS.gene71046:CDS
GGTGTTGCTGACGTTCTCTA+TGG 0.488372 3.3:+67492391 MS.gene71046:CDS
TCTTATGCCATAGTTATTGT+GGG 0.491158 3.3:+67492169 MS.gene71046:CDS
CGCCAACATTCATTGGAAGC+TGG 0.492042 3.3:-67492465 None:intergenic
GCCATGACCAAGTACTTCAT+TGG 0.492284 3.3:+67488666 MS.gene71046:CDS
CATACATTGGTGATGGTGCT+TGG 0.492523 3.3:-67492253 None:intergenic
TGGATGGACAATTACTTGGC+AGG 0.494957 3.3:+67491685 MS.gene71046:CDS
CTAAGTCTCGCAAACCAATT+GGG 0.503129 3.3:+67491408 MS.gene71046:CDS
AAATCTTCAATCCCTGTAGT+GGG 0.504070 3.3:+67488474 MS.gene71046:CDS
AGTGGTAGTGATCTTACAAC+GGG 0.506662 3.3:+67491713 MS.gene71046:CDS
GTTCCCTTCCTGGAATTGCC+AGG 0.508459 3.3:-67489767 None:intergenic
TCCCTAGTGCTGCTAAAGAA+TGG 0.509354 3.3:+67491566 MS.gene71046:CDS
GTCAAATGACTCAGCTTGAA+AGG 0.511265 3.3:+67488625 MS.gene71046:CDS
TTATGATCTCCTACACTAGC+TGG 0.511540 3.3:+67490828 MS.gene71046:CDS
AGATATGGCTGAATCACAAC+CGG 0.512743 3.3:-67492316 None:intergenic
ACTTACTTTCCAGCAACAAA+GGG 0.513215 3.3:-67489791 None:intergenic
GAAGGCATCTGCTGAGACTT+GGG 0.515013 3.3:+67489110 MS.gene71046:CDS
AGTTAGCAAGAGAAGCTGTT+CGG 0.516214 3.3:+67491540 MS.gene71046:CDS
GTAGTCAAACCAAATCCAAA+TGG 0.519838 3.3:-67492511 None:intergenic
ACCAATGAAGTACTTGGTCA+TGG 0.520535 3.3:-67488667 None:intergenic
AACTTACTTTCCAGCAACAA+AGG 0.521741 3.3:-67489792 None:intergenic
TCTCCTACACTAGCTGGAAT+GGG 0.523580 3.3:+67490834 MS.gene71046:CDS
ACCATCTCCCACAAAATGCT+TGG 0.524715 3.3:-67490696 None:intergenic
AATCTAACAATTCCTGAGCC+AGG 0.525037 3.3:+67492229 MS.gene71046:CDS
TTTGAGGCTTTCTTGGGAAG+GGG 0.526484 3.3:-67491614 None:intergenic
AGGGAGTGTTCCAGCTGAGA+AGG 0.529677 3.3:+67489092 MS.gene71046:CDS
ATGACTTTGGAGGAAAAGAT+AGG 0.531688 3.3:+67488603 MS.gene71046:CDS
TAGTTTACCAATGAAGTACT+TGG 0.536321 3.3:-67488673 None:intergenic
GAAATCTTCAATCCCTGTAG+TGG 0.541084 3.3:+67488473 MS.gene71046:CDS
TAGAAAGTATAAAGATCCTA+AGG 0.541881 3.3:+67488542 MS.gene71046:CDS
GATTGGAGAAGCAACTGCAC+TGG 0.544676 3.3:+67489499 MS.gene71046:CDS
CGCAAACCAATTGGGTAGCA+AGG 0.549958 3.3:+67491416 MS.gene71046:CDS
CAGATTGGCAGGGTATTGAC+CGG 0.554348 3.3:+67491048 MS.gene71046:CDS
CTTAAGAGTAAAATTTACCA+TGG 0.558634 3.3:+67491359 MS.gene71046:CDS
TATTCATACTCTGTTGAAGC+TGG 0.559362 3.3:+67491095 MS.gene71046:CDS
AGCACCATCACCAATGTATG+TGG 0.560509 3.3:+67492256 MS.gene71046:CDS
GCAGGGAGTGTGTTGAGTGG+GGG 0.562901 3.3:+67489069 MS.gene71046:intron
TGAGCAGGGAGTGTGTTGAG+TGG 0.563237 3.3:+67489066 MS.gene71046:intron
ACCATTCTTTAGCAGCACTA+GGG 0.563428 3.3:-67491567 None:intergenic
ATGTTGGGCTTGGAGTTACC+AGG 0.568992 3.3:+67489256 MS.gene71046:CDS
GCTAACCGTGATCTTGTCAC+TGG 0.569380 3.3:+67490869 MS.gene71046:CDS
TATGAATAGTTAGCATGAGG+AGG 0.570907 3.3:-67491080 None:intergenic
TCATAGCAACGTCCCCACCT+TGG 0.571419 3.3:-67489674 None:intergenic
ATAAGCTACAAAGGATTACT+CGG 0.572316 3.3:+67490755 MS.gene71046:CDS
AATTCACTGGCAAACTGGCA+AGG 0.573063 3.3:+67492422 MS.gene71046:CDS
GGAGATGGTGGCACAACCAA+GGG 0.574513 3.3:+67490710 MS.gene71046:CDS
TACCATTCTTTAGCAGCACT+AGG 0.575010 3.3:-67491568 None:intergenic
TTTCCCATTCCAGCTAGTGT+AGG 0.575849 3.3:-67490837 None:intergenic
TTGATGCACTTGTGGCTGCA+TGG 0.576226 3.3:+67492347 MS.gene71046:CDS
GGAATATCTCCTTGAAGACC+AGG 0.579694 3.3:-67489746 None:intergenic
CTGGCAAACTGGCAAGGACA+TGG 0.581102 3.3:+67492428 MS.gene71046:CDS
GACCAGCTTCCAATGAATGT+TGG 0.581266 3.3:+67492463 MS.gene71046:CDS
ATAATTGAGTCATAGTATGC+CGG 0.583402 3.3:-67490788 None:intergenic
CTTCCTGGCACTGAAGGCCA+AGG 0.585582 3.3:+67492370 MS.gene71046:CDS
ATAGTTAGCATGAGGAGGAG+AGG 0.585602 3.3:-67491075 None:intergenic
TTAAGAGTAAAATTTACCAT+GGG 0.589009 3.3:+67491360 MS.gene71046:CDS
TCGAATTGAGCCACATACAT+TGG 0.595136 3.3:-67492266 None:intergenic
ATCTTCAATCCCTGTAGTGG+GGG 0.596502 3.3:+67488476 MS.gene71046:CDS
GTGGTGGATGGACAATTACT+TGG 0.597728 3.3:+67491681 MS.gene71046:CDS
TACTATGACTCAATTATCAA+GGG 0.601533 3.3:+67490794 MS.gene71046:CDS
TATTCCTGGCAATTCCAGGA+AGG 0.608444 3.3:+67489763 MS.gene71046:CDS
TGGGTAATCAATGTGGTGGA+TGG 0.609548 3.3:+67491669 MS.gene71046:CDS
GGATGGACAATTACTTGGCA+GGG 0.610729 3.3:+67491686 MS.gene71046:CDS
GGGAGATGGTGGCACAACCA+AGG 0.610937 3.3:+67490709 MS.gene71046:CDS
ATTACTTTGACCCAGGAACA+AGG 0.611384 3.3:+67490661 MS.gene71046:intron
CACAGGTCTGCAGAGATCCA+AGG 0.612507 3.3:+67489657 MS.gene71046:intron
AATACTGTGATAAGCTACAA+AGG 0.622468 3.3:+67490746 MS.gene71046:CDS
GTCTGCAGAGATCCAAGGTG+GGG 0.623803 3.3:+67489662 MS.gene71046:CDS
ACTCCAAGCCCAACATTGTG+AGG 0.625086 3.3:-67489249 None:intergenic
ATTCCTGGCAATTCCAGGAA+GGG 0.629290 3.3:+67489764 MS.gene71046:CDS
AGAGAACGTCAGCAACACCT+TGG 0.631511 3.3:-67492387 None:intergenic
GAGTATGAATAGTTAGCATG+AGG 0.632304 3.3:-67491083 None:intergenic
AATCTTCAATCCCTGTAGTG+GGG 0.637064 3.3:+67488475 MS.gene71046:CDS
TAGCAGGATTGACGATGCTG+TGG 0.639920 3.3:+67491329 MS.gene71046:CDS
TGCGTTTGCTCCATGTATTG+CGG 0.648757 3.3:+67489547 MS.gene71046:CDS
ATTACTCGGACTTCACATGC+CGG 0.651076 3.3:+67490769 MS.gene71046:CDS
TGAGCCACATACATTGGTGA+TGG 0.655207 3.3:-67492260 None:intergenic
GGTCTGCAGAGATCCAAGGT+GGG 0.656347 3.3:+67489661 MS.gene71046:intron
GATAACCAGTGACAAGATCA+CGG 0.663157 3.3:-67490874 None:intergenic
AGGTCTGCAGAGATCCAAGG+TGG 0.666220 3.3:+67489660 MS.gene71046:intron
AATTTGGGTAATCAATGTGG+TGG 0.666365 3.3:+67491665 MS.gene71046:CDS
GCGAGACTTAGATCAGCGAG+TGG 0.666997 3.3:-67491396 None:intergenic
TAAATCATTGGAATCCCAAG+AGG 0.673274 3.3:-67489174 None:intergenic
TAGTGGTAGTGATCTTACAA+CGG 0.680346 3.3:+67491712 MS.gene71046:CDS
TTTGTCATATCAGATTGGCA+GGG 0.682521 3.3:+67491038 MS.gene71046:CDS
GACAATTTGGGTAATCAATG+TGG 0.683166 3.3:+67491662 MS.gene71046:CDS
GTTATCTCAAGAACAAACTG+CGG 0.748132 3.3:+67490891 MS.gene71046:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATTAAATAGCACATTA+AGG + chr3.3:67490447-67490466 MS.gene71046:intron 15.0%
!! TCTATATAACAAATAGTATT+CGG + chr3.3:67491865-67491884 MS.gene71046:intron 15.0%
!! TTTCATTCACAAAAATAAAA+GGG + chr3.3:67490174-67490193 MS.gene71046:intron 15.0%
!!! AGTTTTTATATATTACAGTT+AGG + chr3.3:67491825-67491844 MS.gene71046:intron 15.0%
!!! GTTTTGAAAAGAAAATTTTA+TGG + chr3.3:67489817-67489836 MS.gene71046:intron 15.0%
!!! TAAATATTATTTTCAGTTCA+TGG + chr3.3:67491141-67491160 MS.gene71046:intron 15.0%
!!! TTTTCATTCACAAAAATAAA+AGG + chr3.3:67490173-67490192 MS.gene71046:intron 15.0%
!! AATATTGTTCTTTACTTGAA+AGG - chr3.3:67491301-67491320 None:intergenic 20.0%
!! AGAAAAAGAAATAGAAAAGA+TGG + chr3.3:67490200-67490219 MS.gene71046:intron 20.0%
!! ATCTACTGTAAATAATTGAT+GGG - chr3.3:67490132-67490151 None:intergenic 20.0%
!! GTCAAAGTAATAAAAATGAA+GGG - chr3.3:67490652-67490671 None:intergenic 20.0%
!! TATCTACTGTAAATAATTGA+TGG - chr3.3:67490133-67490152 None:intergenic 20.0%
!! TCAATTATTTACAGTAGATA+AGG + chr3.3:67490133-67490152 MS.gene71046:intron 20.0%
!! TTAAGAGTAAAATTTACCAT+GGG + chr3.3:67491360-67491379 MS.gene71046:CDS 20.0%
!! TTTATGTATTATGTGTGATA+AGG - chr3.3:67490431-67490450 None:intergenic 20.0%
!!! CATATTTGATAATTTGTAAC+TGG + chr3.3:67489357-67489376 MS.gene71046:intron 20.0%
!!! CTAAAGTTGAATTCTATTTT+AGG + chr3.3:67490358-67490377 MS.gene71046:intron 20.0%
!!! TCATAAGTTTTATATCAGTT+TGG + chr3.3:67490034-67490053 MS.gene71046:intron 20.0%
! AAAAGAAATAGAAAAGATGG+CGG + chr3.3:67490203-67490222 MS.gene71046:intron 25.0%
! AACTTAAGTCACAAAAAGAA+AGG + chr3.3:67490963-67490982 MS.gene71046:intron 25.0%
! AAGAAATCATAGAATCATCT+TGG - chr3.3:67491913-67491932 None:intergenic 25.0%
! AATGAAATCTACCGTTTATT+AGG + chr3.3:67489456-67489475 MS.gene71046:intron 25.0%
! AATGAACTCAGTAAAGTTAT+AGG - chr3.3:67491268-67491287 None:intergenic 25.0%
! ACATCTAAATCTTAAGTTCT+TGG + chr3.3:67489942-67489961 MS.gene71046:intron 25.0%
! ACCATAAAAAAAGAAGCTTA+TGG - chr3.3:67490231-67490250 None:intergenic 25.0%
! ATACTATGACTCAATTATCA+AGG + chr3.3:67490793-67490812 MS.gene71046:CDS 25.0%
! ATGAAATCTACCGTTTATTA+GGG + chr3.3:67489457-67489476 MS.gene71046:intron 25.0%
! ATGAACTCAGTAAAGTTATA+GGG - chr3.3:67491267-67491286 None:intergenic 25.0%
! ATTTGAATGCAAAATATGTG+TGG - chr3.3:67490274-67490293 None:intergenic 25.0%
! CAAATATGATTGTTTATCTG+CGG + chr3.3:67490080-67490099 MS.gene71046:intron 25.0%
! CCATAAAAAAAGAAGCTTAT+GGG - chr3.3:67490230-67490249 None:intergenic 25.0%
! CTTAAGAGTAAAATTTACCA+TGG + chr3.3:67491359-67491378 MS.gene71046:CDS 25.0%
! GGTCAAAGTAATAAAAATGA+AGG - chr3.3:67490653-67490672 None:intergenic 25.0%
! TACTATGACTCAATTATCAA+GGG + chr3.3:67490794-67490813 MS.gene71046:CDS 25.0%
! TCTACTGTAAATAATTGATG+GGG - chr3.3:67490131-67490150 None:intergenic 25.0%
! TCTTTGATTCTTCTATTCAA+TGG - chr3.3:67488570-67488589 None:intergenic 25.0%
! TGATGATAGATTTGTGTAAA+GGG + chr3.3:67488772-67488791 MS.gene71046:intron 25.0%
! TTTGAATGCAAAATATGTGT+GGG - chr3.3:67490273-67490292 None:intergenic 25.0%
!! AATTTTTCTTCCATCTTGTA+GGG + chr3.3:67491014-67491033 MS.gene71046:intron 25.0%
!! ACACATATTTTGCATTCAAA+TGG + chr3.3:67490273-67490292 MS.gene71046:intron 25.0%
!! GCATCAATTTTTGATAGATA+TGG - chr3.3:67492334-67492353 None:intergenic 25.0%
!! GTTTTACAATTTCCCATAAA+AGG - chr3.3:67492020-67492039 None:intergenic 25.0%
!! TAATTTTTCTTCCATCTTGT+AGG + chr3.3:67491013-67491032 MS.gene71046:intron 25.0%
!! TAGAAAGTATAAAGATCCTA+AGG + chr3.3:67488542-67488561 MS.gene71046:CDS 25.0%
!! TCTTCTTTTCAATCATTTCA+TGG - chr3.3:67489313-67489332 None:intergenic 25.0%
!! TTTTGTGAATGAAAAAGCAA+GGG - chr3.3:67490168-67490187 None:intergenic 25.0%
!! TTTTTGTGAATGAAAAAGCA+AGG - chr3.3:67490169-67490188 None:intergenic 25.0%
!!! GTCATAGTTTTAACAATCTT+AGG - chr3.3:67489716-67489735 None:intergenic 25.0%
!!! TAAGATTATTTTTTCCTGAC+AGG + chr3.3:67492046-67492065 MS.gene71046:intron 25.0%
!!! TTTATTGTTTTGCTGTAATG+AGG + chr3.3:67489013-67489032 MS.gene71046:intron 25.0%
AAACCTTATGCTGAAACATT+TGG + chr3.3:67492196-67492215 MS.gene71046:CDS 30.0%
AATACTGTGATAAGCTACAA+AGG + chr3.3:67490746-67490765 MS.gene71046:CDS 30.0%
ACAATATTATCCCAATTAGC+AGG + chr3.3:67491313-67491332 MS.gene71046:CDS 30.0%
ACTATGACTGAAATTATTCC+TGG + chr3.3:67489728-67489747 MS.gene71046:CDS 30.0%
ATAAGCTACAAAGGATTACT+CGG + chr3.3:67490755-67490774 MS.gene71046:CDS 30.0%
ATAATTGAGTCATAGTATGC+CGG - chr3.3:67490791-67490810 None:intergenic 30.0%
ATCAAAAATTGATGCACTTG+TGG + chr3.3:67492339-67492358 MS.gene71046:CDS 30.0%
CCAGTGCTAATTAAAAAGAT+TGG + chr3.3:67489482-67489501 MS.gene71046:CDS 30.0%
CTACTGTAAATAATTGATGG+GGG - chr3.3:67490130-67490149 None:intergenic 30.0%
GATGTACTATTCATTAACAC+AGG + chr3.3:67489640-67489659 MS.gene71046:intron 30.0%
GGTCGTATTTACATTATAGA+TGG - chr3.3:67490304-67490323 None:intergenic 30.0%
GTAATGTATGTGTGTTTGAT+TGG + chr3.3:67490469-67490488 MS.gene71046:intron 30.0%
GTGATGATAGATTTGTGTAA+AGG + chr3.3:67488771-67488790 MS.gene71046:intron 30.0%
TAAAACTTATGACCAGAAAC+AGG - chr3.3:67490026-67490045 None:intergenic 30.0%
TATGATCCTCTATTTCCATT+TGG + chr3.3:67492496-67492515 MS.gene71046:CDS 30.0%
TCTTATGCCATAGTTATTGT+GGG + chr3.3:67492169-67492188 MS.gene71046:CDS 30.0%
TGTTCTTTACTTGAAAGGTT+AGG - chr3.3:67491296-67491315 None:intergenic 30.0%
TTCACATTGTTTGCAGATTA+TGG + chr3.3:67491239-67491258 MS.gene71046:intron 30.0%
TTCTTATGCCATAGTTATTG+TGG + chr3.3:67492168-67492187 MS.gene71046:CDS 30.0%
TTGGGATTCCAATGATTTAT+GGG + chr3.3:67489178-67489197 MS.gene71046:CDS 30.0%
TTTGATGAGTAGAATGACTT+TGG + chr3.3:67488590-67488609 MS.gene71046:CDS 30.0%
TTTGTGAATGAAAAAGCAAG+GGG - chr3.3:67490167-67490186 None:intergenic 30.0%
! AAGTCTTGTAGTTGTATGAT+TGG + chr3.3:67489844-67489863 MS.gene71046:intron 30.0%
! AATTATTATCAGTGTCGTTG+AGG + chr3.3:67488938-67488957 MS.gene71046:intron 30.0%
! ACCAAGACTTTTTGTGTAAT+TGG - chr3.3:67490387-67490406 None:intergenic 30.0%
! ATATTTTGCATTCAAATGGC+TGG + chr3.3:67490277-67490296 MS.gene71046:intron 30.0%
! CATTTTTATTACTTTGACCC+AGG + chr3.3:67490654-67490673 MS.gene71046:intron 30.0%
! CCAAGACTTTTTGTGTAATT+GGG - chr3.3:67490386-67490405 None:intergenic 30.0%
! CTTTGATCAAGTTTTCTGAT+AGG + chr3.3:67489615-67489634 MS.gene71046:intron 30.0%
! TAGTTTACCAATGAAGTACT+TGG - chr3.3:67488676-67488695 None:intergenic 30.0%
! TTTCCATAGCATCCTTTTAT+GGG + chr3.3:67492005-67492024 MS.gene71046:intron 30.0%
! TTTTTCTCCCACAATAACTA+TGG - chr3.3:67492179-67492198 None:intergenic 30.0%
!! ACTATTTTTCCTCACAATGT+TGG + chr3.3:67489240-67489259 MS.gene71046:CDS 30.0%
!! CCAATCTTTTTAATTAGCAC+TGG - chr3.3:67489485-67489504 None:intergenic 30.0%
!! CTATTTTTCCTCACAATGTT+GGG + chr3.3:67489241-67489260 MS.gene71046:CDS 30.0%
!! GATTGGTGATTTTCTATGAA+GGG + chr3.3:67489861-67489880 MS.gene71046:intron 30.0%
!! TGATTGGTGATTTTCTATGA+AGG + chr3.3:67489860-67489879 MS.gene71046:intron 30.0%
!! TTGTTTTATAGCATCAAGGA+TGG - chr3.3:67492077-67492096 None:intergenic 30.0%
!!! CCCATAAGCTTCTTTTTTTA+TGG + chr3.3:67490227-67490246 MS.gene71046:intron 30.0%
!!! CTGTTTGTTTTATAGCATCA+AGG - chr3.3:67492081-67492100 None:intergenic 30.0%
AAATCTTCAATCCCTGTAGT+GGG + chr3.3:67488474-67488493 MS.gene71046:CDS 35.0%
AACTTACTTTCCAGCAACAA+AGG - chr3.3:67489795-67489814 None:intergenic 35.0%
AATTTGGGTAATCAATGTGG+TGG + chr3.3:67491665-67491684 MS.gene71046:CDS 35.0%
ACTTACTTTCCAGCAACAAA+GGG - chr3.3:67489794-67489813 None:intergenic 35.0%
AGGCAAGTTTATGTATATGC+AGG + chr3.3:67489276-67489295 MS.gene71046:intron 35.0%
ATACTTGAAGAAGTGAACCT+TGG + chr3.3:67489385-67489404 MS.gene71046:intron 35.0%
ATTGTTCTCATTGATACCCT+TGG - chr3.3:67490729-67490748 None:intergenic 35.0%
CATCTTACCAGTTGTGTTTA+CGG - chr3.3:67491945-67491964 None:intergenic 35.0%
CCAAATCCAAATGGAAATAG+AGG - chr3.3:67492505-67492524 None:intergenic 35.0%
CCCAATTACACAAAAAGTCT+TGG + chr3.3:67490383-67490402 MS.gene71046:intron 35.0%
CCTCTATTTCCATTTGGATT+TGG + chr3.3:67492502-67492521 MS.gene71046:CDS 35.0%
CTTGGGATTCCAATGATTTA+TGG + chr3.3:67489177-67489196 MS.gene71046:CDS 35.0%
GACAATTTGGGTAATCAATG+TGG + chr3.3:67491662-67491681 MS.gene71046:CDS 35.0%
GACTTGATAAAACTAGCATC+TGG - chr3.3:67492139-67492158 None:intergenic 35.0%
GAGTATGAATAGTTAGCATG+AGG - chr3.3:67491086-67491105 None:intergenic 35.0%
GCATCTATCCCATAAATCAT+TGG - chr3.3:67489189-67489208 None:intergenic 35.0%
GTAGTCAAACCAAATCCAAA+TGG - chr3.3:67492514-67492533 None:intergenic 35.0%
GTTATCTCAAGAACAAACTG+CGG + chr3.3:67490891-67490910 MS.gene71046:CDS 35.0%
TAAATCATTGGAATCCCAAG+AGG - chr3.3:67489177-67489196 None:intergenic 35.0%
TAGATTTGTGTTTATCGCCA+AGG - chr3.3:67489405-67489424 None:intergenic 35.0%
TATGAATAGTTAGCATGAGG+AGG - chr3.3:67491083-67491102 None:intergenic 35.0%
TATGACAAAACCCTACAAGA+TGG - chr3.3:67491027-67491046 None:intergenic 35.0%
TATGGTGACTTTGAATTCAC+TGG + chr3.3:67492409-67492428 MS.gene71046:CDS 35.0%
TATTCATACTCTGTTGAAGC+TGG + chr3.3:67491095-67491114 MS.gene71046:CDS 35.0%
TCACCAAATGTTTCAGCATA+AGG - chr3.3:67492202-67492221 None:intergenic 35.0%
TCGCATATCATGTCTTAAAC+AGG + chr3.3:67491508-67491527 MS.gene71046:intron 35.0%
TGCATATACATAAACTTGCC+TGG - chr3.3:67489277-67489296 None:intergenic 35.0%
TGTTTATCGCCAACATTCAT+TGG - chr3.3:67492475-67492494 None:intergenic 35.0%
TTTCCCATAAAAGGATGCTA+TGG - chr3.3:67492011-67492030 None:intergenic 35.0%
TTTGTCATATCAGATTGGCA+GGG + chr3.3:67491038-67491057 MS.gene71046:CDS 35.0%
! ATGACTTTGGAGGAAAAGAT+AGG + chr3.3:67488603-67488622 MS.gene71046:CDS 35.0%
! CTTTCCATAGCATCCTTTTA+TGG + chr3.3:67492004-67492023 MS.gene71046:intron 35.0%
! GAAATTATTCCTGGTCTTCA+AGG + chr3.3:67489737-67489756 MS.gene71046:CDS 35.0%
! GAGTAGATAAAGCTGCATTT+TGG - chr3.3:67489155-67489174 None:intergenic 35.0%
! GCTGTAATGAGGTGATTTTA+TGG + chr3.3:67489024-67489043 MS.gene71046:intron 35.0%
! TAGTGGTAGTGATCTTACAA+CGG + chr3.3:67491712-67491731 MS.gene71046:CDS 35.0%
! TTTTGTCATATCAGATTGGC+AGG + chr3.3:67491037-67491056 MS.gene71046:CDS 35.0%
!! AGGGTTTTGTCATATCAGAT+TGG + chr3.3:67491033-67491052 MS.gene71046:intron 35.0%
!!! AAGACTTTTGAGGCTTTCTT+GGG - chr3.3:67491623-67491642 None:intergenic 35.0%
!!! TGTTTTGTTTTGCCTGTTTC+TGG + chr3.3:67490011-67490030 MS.gene71046:intron 35.0%
AATCTAACAATTCCTGAGCC+AGG + chr3.3:67492229-67492248 MS.gene71046:CDS 40.0%
AATCTTCAATCCCTGTAGTG+GGG + chr3.3:67488475-67488494 MS.gene71046:CDS 40.0%
AATGTACCTTGCTACCCAAT+TGG - chr3.3:67491425-67491444 None:intergenic 40.0%
ACCACACACATTGTAAGTGT+CGG - chr3.3:67488858-67488877 None:intergenic 40.0%
ACCATTCTTTAGCAGCACTA+GGG - chr3.3:67491570-67491589 None:intergenic 40.0%
AGATATGGCTGAATCACAAC+CGG - chr3.3:67492319-67492338 None:intergenic 40.0%
AGCTTCTTTACCGCAATACA+TGG - chr3.3:67489560-67489579 None:intergenic 40.0%
AGGAAGTCATGCTGACAATT+TGG + chr3.3:67491649-67491668 MS.gene71046:CDS 40.0%
AGTTAGCAAGAGAAGCTGTT+CGG + chr3.3:67491540-67491559 MS.gene71046:CDS 40.0%
ATACATGGAGCAAACGCATA+TGG - chr3.3:67489545-67489564 None:intergenic 40.0%
ATTACTTTGACCCAGGAACA+AGG + chr3.3:67490661-67490680 MS.gene71046:intron 40.0%
CAAGAAAGCCTCAAAAGTCT+TGG + chr3.3:67491622-67491641 MS.gene71046:CDS 40.0%
CACTTCAGATCAAATGTGTG+TGG + chr3.3:67488820-67488839 MS.gene71046:intron 40.0%
CATCGTCAATCCTGCTAATT+GGG - chr3.3:67491326-67491345 None:intergenic 40.0%
CTAAGTCTCGCAAACCAATT+GGG + chr3.3:67491408-67491427 MS.gene71046:CDS 40.0%
CTTCTATTCAATGGCACCTT+AGG - chr3.3:67488561-67488580 None:intergenic 40.0%
CTTTGAATTCACTGGCAAAC+TGG + chr3.3:67492417-67492436 MS.gene71046:CDS 40.0%
GAAATCTTCAATCCCTGTAG+TGG + chr3.3:67488473-67488492 MS.gene71046:CDS 40.0%
GATAACCAGTGACAAGATCA+CGG - chr3.3:67490877-67490896 None:intergenic 40.0%
GATGAGTAGAATGACTTTGG+AGG + chr3.3:67488593-67488612 MS.gene71046:CDS 40.0%
GCATTCAGCACATGTTCAAA+TGG - chr3.3:67491460-67491479 None:intergenic 40.0%
GGAAGTCATGCTGACAATTT+GGG + chr3.3:67491650-67491669 MS.gene71046:CDS 40.0%
GTCAAATGACTCAGCTTGAA+AGG + chr3.3:67488625-67488644 MS.gene71046:CDS 40.0%
TACCATTCTTTAGCAGCACT+AGG - chr3.3:67491571-67491590 None:intergenic 40.0%
TATGGGATAGATGCTGTTCA+TGG + chr3.3:67489195-67489214 MS.gene71046:CDS 40.0%
TCGAATTGAGCCACATACAT+TGG - chr3.3:67492269-67492288 None:intergenic 40.0%
TCTAACAGACATTCTGAGTG+CGG - chr3.3:67491798-67491817 None:intergenic 40.0%
TCTAAGTCTCGCAAACCAAT+TGG + chr3.3:67491407-67491426 MS.gene71046:CDS 40.0%
TGTCAGTGTCTAGTAAGTGT+CGG - chr3.3:67488892-67488911 None:intergenic 40.0%
TTATGATCTCCTACACTAGC+TGG + chr3.3:67490828-67490847 MS.gene71046:CDS 40.0%
TTCAGATCAAATGTGTGTGG+TGG + chr3.3:67488823-67488842 MS.gene71046:intron 40.0%
TTGTAGACAACTTCAGTTGC+AGG - chr3.3:67492109-67492128 None:intergenic 40.0%
! ACCAATGAAGTACTTGGTCA+TGG - chr3.3:67488670-67488689 None:intergenic 40.0%
! AGCACTGGATCCCTAATAAA+CGG - chr3.3:67489470-67489489 None:intergenic 40.0%
! AGTGGTAGTGATCTTACAAC+GGG + chr3.3:67491713-67491732 MS.gene71046:CDS 40.0%
! CAGCTTTATCTACTCCTCTT+GGG + chr3.3:67489160-67489179 MS.gene71046:CDS 40.0%
! TGACTTGTCATTGATGAGCA+GGG + chr3.3:67489052-67489071 MS.gene71046:intron 40.0%
! TGGATTTTCAAAAAGGCCCA+TGG - chr3.3:67491379-67491398 None:intergenic 40.0%
! TGTCAGTGCTGGAATTGATA+TGG + chr3.3:67491118-67491137 MS.gene71046:CDS 40.0%
!! CAGCGAGTGGATTTTCAAAA+AGG - chr3.3:67491386-67491405 None:intergenic 40.0%
!!! CAAGACTTTTGAGGCTTTCT+TGG - chr3.3:67491624-67491643 None:intergenic 40.0%
!!! TTTTGAGGCTTTCTTGGGAA+GGG - chr3.3:67491618-67491637 None:intergenic 40.0%
AAGTACTTGGTCATGGCTTC+AGG - chr3.3:67488663-67488682 None:intergenic 45.0%
AATTCACTGGCAAACTGGCA+AGG + chr3.3:67492422-67492441 MS.gene71046:CDS 45.0%
ACCATCTCCCACAAAATGCT+TGG - chr3.3:67490699-67490718 None:intergenic 45.0%
AGCACCATCACCAATGTATG+TGG + chr3.3:67492256-67492275 MS.gene71046:CDS 45.0%
ATAGTTAGCATGAGGAGGAG+AGG - chr3.3:67491078-67491097 None:intergenic 45.0%
ATCTCCTACACTAGCTGGAA+TGG + chr3.3:67490833-67490852 MS.gene71046:CDS 45.0%
ATCTTCAATCCCTGTAGTGG+GGG + chr3.3:67488476-67488495 MS.gene71046:CDS 45.0%
ATGGTCCTATGCCATTGTGA+TGG + chr3.3:67490246-67490265 MS.gene71046:intron 45.0%
ATTACTCGGACTTCACATGC+CGG + chr3.3:67490769-67490788 MS.gene71046:CDS 45.0%
ATTACTTGGCAGGGACTTAG+TGG + chr3.3:67491695-67491714 MS.gene71046:CDS 45.0%
ATTCCTGGCAATTCCAGGAA+GGG + chr3.3:67489764-67489783 MS.gene71046:CDS 45.0%
CAAGAACAAACTGCGGTTCA+GGG + chr3.3:67490898-67490917 MS.gene71046:CDS 45.0%
CACTTGTTCAGCTTTCATCG+GGG + chr3.3:67490057-67490076 MS.gene71046:intron 45.0%
GACACTTACAATGTGTGTGG+TGG + chr3.3:67488857-67488876 MS.gene71046:intron 45.0%
GAGATATTCCTGGCAATTCC+AGG + chr3.3:67489759-67489778 MS.gene71046:CDS 45.0%
GCACTTGTTCAGCTTTCATC+GGG + chr3.3:67490056-67490075 MS.gene71046:intron 45.0%
GCATCGTCAATCCTGCTAAT+TGG - chr3.3:67491327-67491346 None:intergenic 45.0%
GCCATGACCAAGTACTTCAT+TGG + chr3.3:67488666-67488685 MS.gene71046:CDS 45.0%
GGAATATCTCCTTGAAGACC+AGG - chr3.3:67489749-67489768 None:intergenic 45.0%
GGATGGACAATTACTTGGCA+GGG + chr3.3:67491686-67491705 MS.gene71046:CDS 45.0%
GGCACTTGTTCAGCTTTCAT+CGG + chr3.3:67490055-67490074 MS.gene71046:intron 45.0%
GGTCTTCAAGGAGATATTCC+TGG + chr3.3:67489749-67489768 MS.gene71046:CDS 45.0%
GTGTAGTTGTTCTCGTCACT+GGG + chr3.3:67492290-67492309 MS.gene71046:CDS 45.0%
TACCAGTTGTGTTTACGGAC+AGG - chr3.3:67491940-67491959 None:intergenic 45.0%
TATGTGTGGGACCATCACAA+TGG - chr3.3:67490260-67490279 None:intergenic 45.0%
TATTCCTGGCAATTCCAGGA+AGG + chr3.3:67489763-67489782 MS.gene71046:CDS 45.0%
TCAAGAACAAACTGCGGTTC+AGG + chr3.3:67490897-67490916 MS.gene71046:CDS 45.0%
TCCGACACTTACAATGTGTG+TGG + chr3.3:67488854-67488873 MS.gene71046:intron 45.0%
TCTCCTACACTAGCTGGAAT+GGG + chr3.3:67490834-67490853 MS.gene71046:CDS 45.0%
TGAGCCACATACATTGGTGA+TGG - chr3.3:67492263-67492282 None:intergenic 45.0%
TGCGTTTGCTCCATGTATTG+CGG + chr3.3:67489547-67489566 MS.gene71046:CDS 45.0%
TGCTGAGACTTGGGTGAAAA+TGG + chr3.3:67489119-67489138 MS.gene71046:CDS 45.0%
TGGATGGACAATTACTTGGC+AGG + chr3.3:67491685-67491704 MS.gene71046:CDS 45.0%
TGTGTAGTTGTTCTCGTCAC+TGG + chr3.3:67492289-67492308 MS.gene71046:CDS 45.0%
TGTGTTTATGTGTGCGTGCA+CGG - chr3.3:67490325-67490344 None:intergenic 45.0%
TTCCTGTCCGTAAACACAAC+TGG + chr3.3:67491935-67491954 MS.gene71046:intron 45.0%
TTTCCCATTCCAGCTAGTGT+AGG - chr3.3:67490840-67490859 None:intergenic 45.0%
TTTCCTCACAATGTTGGGCT+TGG + chr3.3:67489246-67489265 MS.gene71046:CDS 45.0%
! AAGCATTTTGTGGGAGATGG+TGG + chr3.3:67490698-67490717 MS.gene71046:CDS 45.0%
! AGCTTGTGCCAAGCATTTTG+TGG + chr3.3:67490688-67490707 MS.gene71046:CDS 45.0%
! GCAGCTTTATCTACTCCTCT+TGG + chr3.3:67489159-67489178 MS.gene71046:CDS 45.0%
! GCTTGTGCCAAGCATTTTGT+GGG + chr3.3:67490689-67490708 MS.gene71046:CDS 45.0%
! GGTTCTGCTTCTGTGCTTTT+TGG + chr3.3:67488497-67488516 MS.gene71046:CDS 45.0%
! GTGACTTGTCATTGATGAGC+AGG + chr3.3:67489051-67489070 MS.gene71046:intron 45.0%
! TACAATGTGTGTGGTGGTGT+CGG + chr3.3:67488863-67488882 MS.gene71046:intron 45.0%
! TCAAATGTGTGTGGTGGTGT+CGG + chr3.3:67488829-67488848 MS.gene71046:intron 45.0%
! TCCCTAGTGCTGCTAAAGAA+TGG + chr3.3:67491566-67491585 MS.gene71046:CDS 45.0%
! TCCTGCAACCAAGACTTTTG+AGG - chr3.3:67491633-67491652 None:intergenic 45.0%
! TGAAGGGCTTGTTTAGTTGC+TGG + chr3.3:67489877-67489896 MS.gene71046:intron 45.0%
! TGGGTAATCAATGTGGTGGA+TGG + chr3.3:67491669-67491688 MS.gene71046:CDS 45.0%
! TTTGAGGCTTTCTTGGGAAG+GGG - chr3.3:67491617-67491636 None:intergenic 45.0%
!! CATACATTGGTGATGGTGCT+TGG - chr3.3:67492256-67492275 None:intergenic 45.0%
!! GTGGTGGATGGACAATTACT+TGG + chr3.3:67491681-67491700 MS.gene71046:CDS 45.0%
!!! CTTTTGAGGCTTTCTTGGGA+AGG - chr3.3:67491619-67491638 None:intergenic 45.0%
!! AAATAAAAATAAAAATTCTA+AGG - chr3.3:67488989-67489008 None:intergenic 5.0%
!!! ATTTAATTTAATATGAAAAT+TGG - chr3.3:67490580-67490599 None:intergenic 5.0%
AACAAAGGGAGTTCCCTTCC+TGG - chr3.3:67489780-67489799 None:intergenic 50.0%
AAGGGAACTCCCTTTGTTGC+TGG + chr3.3:67489782-67489801 MS.gene71046:CDS 50.0%
ACAAGCTGCAACCTTGTTCC+TGG - chr3.3:67490675-67490694 None:intergenic 50.0%
ACTCCAAGCCCAACATTGTG+AGG - chr3.3:67489252-67489271 None:intergenic 50.0%
AGAGAACGTCAGCAACACCT+TGG - chr3.3:67492390-67492409 None:intergenic 50.0%
ATGTTGGGCTTGGAGTTACC+AGG + chr3.3:67489256-67489275 MS.gene71046:CDS 50.0%
CAAGCTGCAACCTTGTTCCT+GGG - chr3.3:67490674-67490693 None:intergenic 50.0%
CAAGGATGGTTGTACCTGTC+AGG - chr3.3:67492063-67492082 None:intergenic 50.0%
CATGAGGAGGAGAGGTAATC+CGG - chr3.3:67491070-67491089 None:intergenic 50.0%
CGCAAACCAATTGGGTAGCA+AGG + chr3.3:67491416-67491435 MS.gene71046:CDS 50.0%
CGTTGAGGTAGTGTCATGTC+TGG + chr3.3:67488953-67488972 MS.gene71046:intron 50.0%
GATTGGAGAAGCAACTGCAC+TGG + chr3.3:67489499-67489518 MS.gene71046:CDS 50.0%
GCACTGGAAGTTAGAGCTAC+TGG + chr3.3:67489515-67489534 MS.gene71046:CDS 50.0%
GCCTCAAAAGTCTTGGTTGC+AGG + chr3.3:67491629-67491648 MS.gene71046:CDS 50.0%
GCTAACCGTGATCTTGTCAC+TGG + chr3.3:67490869-67490888 MS.gene71046:CDS 50.0%
TAGCAGGATTGACGATGCTG+TGG + chr3.3:67491329-67491348 MS.gene71046:CDS 50.0%
TGGGACCATCACAATGGCAT+AGG - chr3.3:67490254-67490273 None:intergenic 50.0%
TTGATGCACTTGTGGCTGCA+TGG + chr3.3:67492347-67492366 MS.gene71046:CDS 50.0%
! GCCAAGCATTTTGTGGGAGA+TGG + chr3.3:67490695-67490714 MS.gene71046:CDS 50.0%
!! AGAAGGCATCTGCTGAGACT+TGG + chr3.3:67489109-67489128 MS.gene71046:CDS 50.0%
!! CAGATTGGCAGGGTATTGAC+CGG + chr3.3:67491048-67491067 MS.gene71046:CDS 50.0%
!! GAAGGCATCTGCTGAGACTT+GGG + chr3.3:67489110-67489129 MS.gene71046:CDS 50.0%
!! GGTGTTGCTGACGTTCTCTA+TGG + chr3.3:67492391-67492410 MS.gene71046:CDS 50.0%
AGAAGCAGAACCCCCACTAC+AGG - chr3.3:67488489-67488508 None:intergenic 55.0%
AGGTCTGCAGAGATCCAAGG+TGG + chr3.3:67489660-67489679 MS.gene71046:intron 55.0%
CACAGGTCTGCAGAGATCCA+AGG + chr3.3:67489657-67489676 MS.gene71046:intron 55.0%
CTGGCAAACTGGCAAGGACA+TGG + chr3.3:67492428-67492447 MS.gene71046:CDS 55.0%
GAAGCAGAACCCCCACTACA+GGG - chr3.3:67488488-67488507 None:intergenic 55.0%
GATGGGGGAACTCATGTCTG+CGG - chr3.3:67490115-67490134 None:intergenic 55.0%
GCGAGACTTAGATCAGCGAG+TGG - chr3.3:67491399-67491418 None:intergenic 55.0%
GGGAACTCATGTCTGCGGTA+TGG - chr3.3:67490110-67490129 None:intergenic 55.0%
GGTCTGCAGAGATCCAAGGT+GGG + chr3.3:67489661-67489680 MS.gene71046:intron 55.0%
GTCTGCAGAGATCCAAGGTG+GGG + chr3.3:67489662-67489681 MS.gene71046:CDS 55.0%
GTTCCCTTCCTGGAATTGCC+AGG - chr3.3:67489770-67489789 None:intergenic 55.0%
TCAGCAGATGCCTTCTCAGC+TGG - chr3.3:67489105-67489124 None:intergenic 55.0%
TCATAGCAACGTCCCCACCT+TGG - chr3.3:67489677-67489696 None:intergenic 55.0%
TTCTTGGGAAGGGGAAGCAG+TGG - chr3.3:67491608-67491627 None:intergenic 55.0%
! AGCAGGGAGTGTGTTGAGTG+GGG + chr3.3:67489068-67489087 MS.gene71046:intron 55.0%
! GAGCAGGGAGTGTGTTGAGT+GGG + chr3.3:67489067-67489086 MS.gene71046:intron 55.0%
! GGAGATGGTGGCACAACCAA+GGG + chr3.3:67490710-67490729 MS.gene71046:CDS 55.0%
! GTTGAAGCTGGTGTCAGTGC+TGG + chr3.3:67491107-67491126 MS.gene71046:CDS 55.0%
! TGAGCAGGGAGTGTGTTGAG+TGG + chr3.3:67489066-67489085 MS.gene71046:intron 55.0%
!! AGGGAGTGTTCCAGCTGAGA+AGG + chr3.3:67489092-67489111 MS.gene71046:CDS 55.0%
!! TTGGTGATGGTGCTTGGACC+TGG - chr3.3:67492250-67492269 None:intergenic 55.0%
ATGGTGCTTGGACCTGGCTC+AGG - chr3.3:67492244-67492263 None:intergenic 60.0%
CTTGTGGCTGCATGGCTTCC+TGG + chr3.3:67492355-67492374 MS.gene71046:CDS 60.0%
GGAGTGTGTTGAGTGGGGGA+GGG + chr3.3:67489073-67489092 MS.gene71046:CDS 60.0%
TGTTCTCGTCACTGGGCGTC+CGG + chr3.3:67492297-67492316 MS.gene71046:CDS 60.0%
! ACACCTTGGCCTTCAGTGCC+AGG - chr3.3:67492376-67492395 None:intergenic 60.0%
! CTTCCTGGCACTGAAGGCCA+AGG + chr3.3:67492370-67492389 MS.gene71046:CDS 60.0%
! GCAGGGAGTGTGTTGAGTGG+GGG + chr3.3:67489069-67489088 MS.gene71046:intron 60.0%
! GCATGGCTTCCTGGCACTGA+AGG + chr3.3:67492364-67492383 MS.gene71046:CDS 60.0%
! GGGAGATGGTGGCACAACCA+AGG + chr3.3:67490709-67490728 MS.gene71046:CDS 60.0%
! GGGAGTGTGTTGAGTGGGGG+AGG + chr3.3:67489072-67489091 MS.gene71046:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 67488468 67492552 67488468 ID=MS.gene71046
chr3.3 mRNA 67488468 67492552 67488468 ID=MS.gene71046.t1;Parent=MS.gene71046
chr3.3 exon 67488468 67488687 67488468 ID=MS.gene71046.t1.exon1;Parent=MS.gene71046.t1
chr3.3 CDS 67488468 67488687 67488468 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67489073 67489277 67489073 ID=MS.gene71046.t1.exon2;Parent=MS.gene71046.t1
chr3.3 CDS 67489073 67489277 67489073 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67489478 67489568 67489478 ID=MS.gene71046.t1.exon3;Parent=MS.gene71046.t1
chr3.3 CDS 67489478 67489568 67489478 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67489662 67489807 67489662 ID=MS.gene71046.t1.exon4;Parent=MS.gene71046.t1
chr3.3 CDS 67489662 67489807 67489662 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67490676 67490919 67490676 ID=MS.gene71046.t1.exon5;Parent=MS.gene71046.t1
chr3.3 CDS 67490676 67490919 67490676 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67491035 67491139 67491035 ID=MS.gene71046.t1.exon6;Parent=MS.gene71046.t1
chr3.3 CDS 67491035 67491139 67491035 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67491255 67491437 67491255 ID=MS.gene71046.t1.exon7;Parent=MS.gene71046.t1
chr3.3 CDS 67491255 67491437 67491255 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67491530 67491734 67491530 ID=MS.gene71046.t1.exon8;Parent=MS.gene71046.t1
chr3.3 CDS 67491530 67491734 67491530 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
chr3.3 exon 67492068 67492552 67492068 ID=MS.gene71046.t1.exon9;Parent=MS.gene71046.t1
chr3.3 CDS 67492068 67492552 67492068 ID=cds.MS.gene71046.t1;Parent=MS.gene71046.t1
Gene Sequence

>MS.gene71046

ATGGGGAAATCTTCAATCCCTGTAGTGGGGGTTCTGCTTCTGTGCTTTTTGGTTTCATTTTCAGAAGCTGAATATAGAAAGTATAAAGATCCTAAGGTGCCATTGAATAGAAGAATCAAAGATTTGATGAGTAGAATGACTTTGGAGGAAAAGATAGGTCAAATGACTCAGCTTGAAAGGAGTGTTGCTACTCCTGAAGCCATGACCAAGTACTTCATTGGTAAACTACTCATCACTTTGCTACTCAAATCTAGTAGTTTTTTATATTGTTTGATGTTGTCATGTTTTTCTGAATCTGAGTGTGTGATGATAGATTTGTGTAAAGGGTACTATGTAGCAGTAGTAGTACTGACACTTCAGATCAAATGTGTGTGGTGGTGTCGGTGTCCGACACTTACAATGTGTGTGGTGGTGTCGGTGTCCGACACTTACTAGACACTGACACTACATTCAGTTATTCTATTTTCTCAAATTATTATCAGTGTCGTTGAGGTAGTGTCATGTCTGGTGTCAGCATTCCTTAGAATTTTTATTTTTATTTTTATTTTATTGTTTTGCTGTAATGAGGTGATTTTATGGATATGTGACTTGTCATTGATGAGCAGGGAGTGTGTTGAGTGGGGGAGGGAGTGTTCCAGCTGAGAAGGCATCTGCTGAGACTTGGGTGAAAATGGTGAATCAGATCCAAAATGCAGCTTTATCTACTCCTCTTGGGATTCCAATGATTTATGGGATAGATGCTGTTCATGGTCACAATAATGTCTACAATGCTACTATTTTTCCTCACAATGTTGGGCTTGGAGTTACCAGGCAAGTTTATGTATATGCAGGAATTTTAATAGCCATGAAATGATTGAAAAGAAGAAAAAATTAGTAGTGACATTAAATTCATATTTGATAATTTGTAACTGGAAGCTATACTTGAAGAAGTGAACCTTGGCGATAAACACAAATCTAGCAATTTAGTGCATTTTCTTGCTTTTATTGTAATGAAATCTACCGTTTATTAGGGATCCAGTGCTAATTAAAAAGATTGGAGAAGCAACTGCACTGGAAGTTAGAGCTACTGGAATTCCATATGCGTTTGCTCCATGTATTGCGGTAAAGAAGCTGCGTTTTTATATTCTGTTGTTTGAATCATATACAACTTTGATCAAGTTTTCTGATAGGTTGATGTACTATTCATTAACACAGGTCTGCAGAGATCCAAGGTGGGGACGTTGCTATGAAAGCTACAGTGAAGATCCTAAGATTGTTAAAACTATGACTGAAATTATTCCTGGTCTTCAAGGAGATATTCCTGGCAATTCCAGGAAGGGAACTCCCTTTGTTGCTGGAAAGTAAGTTTTGTTTTGAAAAGAAAATTTTATGGTCATAAGTCTTGTAGTTGTATGATTGGTGATTTTCTATGAAGGGCTTGTTTAGTTGCTGGAAAATGTTTCAGAACATGAAATACATTTATAAATTCTTTTGAACATCTAAATCTTAAGTTCTTGGTAATAACATTATATTGATTTATATTATATGTTTTCTTAATTACATTTGTTTTGTTTTGCCTGTTTCTGGTCATAAGTTTTATATCAGTTTGGCACTTGTTCAGCTTTCATCGGGGCAAATATGATTGTTTATCTGCGGTAGACCATACCGCAGACATGAGTTCCCCCATCAATTATTTACAGTAGATAAGGTTTATGTTCCCCTTGCTTTTTCATTCACAAAAATAAAAGGGAGAAGAAAAAGAAATAGAAAAGATGGCGGACCCATAAGCTTCTTTTTTTATGGTCCTATGCCATTGTGATGGTCCCACACATATTTTGCATTCAAATGGCTGGACCATCTATAATGTAAATACGACCGTGCACGCACACATAAACACAAAGATATGAGCTGCTAAAGTTGAATTCTATTTTAGGAGCCCAATTACACAAAAAGTCTTGGTCATAAAGCATGCATGCAATGTCCTTATCACACATAATACATAAAATTAAATAGCACATTAAGGTAATGTATGTGTGTTTGATTGGCTGTAATCAATAATTTGATCTTATAATTTATATATGATATGTTTAGATTTAATATTTCTGTGTCTGATTTCGAATGACAAAGTTTCCAATTTTCATATTAAATTAAATAATGAATAGCAGCTCATTTATTGTATGTATAGAACTGAAATAAAAACGACCCTTCATTTTTATTACTTTGACCCAGGAACAAGGTTGCAGCTTGTGCCAAGCATTTTGTGGGAGATGGTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATAAGCTACAAAGGATTACTCGGACTTCACATGCCGGCATACTATGACTCAATTATCAAGGGTGTTTCAACAGTTATGATCTCCTACACTAGCTGGAATGGGAAAAAGATGCATGCTAACCGTGATCTTGTCACTGGTTATCTCAAGAACAAACTGCGGTTCAGGGTAATACAGTTTATCTAAATAGATTTCTAATGTAAAAAAATTGAACTTAAGTCACAAAAAGAAAGGAAAAGATGTAGATAGCTACATATCATGTAATTTTTCTTCCATCTTGTAGGGTTTTGTCATATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCATACTCTGTTGAAGCTGGTGTCAGTGCTGGAATTGATATGGTAAATATTATTTTCAGTTCATGGAGTAAACGAGAGAAACATAAACTGTGTTTTTTTAGTCTGAAAGTTTAATATTTTGAAAAAAAATTCTAATTAACATTCACATTGTTTGCAGATTATGGTTCCCTATAACTTTACTGAGTTCATTGATGACCTAACCTTTCAAGTAAAGAACAATATTATCCCAATTAGCAGGATTGACGATGCTGTGGCAAGAATCTTAAGAGTAAAATTTACCATGGGCCTTTTTGAAAATCCACTCGCTGATCTAAGTCTCGCAAACCAATTGGGTAGCAAGGTACATTTTCTTATGAATGCCATTTGAACATGTGCTGAATGCTTCATGCATTTTGAGTTTGTTTTGTTGATCGCATATCATGTCTTAAACAGGAACATAGAGAGTTAGCAAGAGAAGCTGTTCGGAAATCCCTAGTGCTGCTAAAGAATGGTAAATATGCAAACAAGCCACTGCTTCCCCTTCCCAAGAAAGCCTCAAAAGTCTTGGTTGCAGGAAGTCATGCTGACAATTTGGGTAATCAATGTGGTGGATGGACAATTACTTGGCAGGGACTTAGTGGTAGTGATCTTACAACGGGTAAGTCAACTCATTTAATGTGCACAAAAGTTACTTCGAAAAGCTATACAATTCTAGAATCCGCACTCAGAATGTCTGTTAGATTGTAATAGTTTTTATATATTACAGTTAGGATATCTAAAATTAAAAGTCTATATAACAAATAGTATTCGGTTAATGATTATTTATTCGTAGTCCAAGATGATTCTATGATTTCTTTCTTCCTGTCCGTAAACACAACTGGTAAGATGAAAAACATTCATACAGTGAGATATGTTTTTTTTTTTTCTCTTTCCATAGCATCCTTTTATGGGAAATTGTAAAACATCTGATAAGATTATTTTTTCCTGACAGGTACAACCATCCTTGATGCTATAAAACAAACAGTTGATCCTGCAACTGAAGTTGTCTACAACGAAAATCCAGATGCTAGTTTTATCAAGTCAAACAAATTTTCTTATGCCATAGTTATTGTGGGAGAAAAACCTTATGCTGAAACATTTGGTGACAGTTTGAATCTAACAATTCCTGAGCCAGGTCCAAGCACCATCACCAATGTATGTGGCTCAATTCGATGTGTAGTTGTTCTCGTCACTGGGCGTCCGGTTGTGATTCAGCCATATCTATCAAAAATTGATGCACTTGTGGCTGCATGGCTTCCTGGCACTGAAGGCCAAGGTGTTGCTGACGTTCTCTATGGTGACTTTGAATTCACTGGCAAACTGGCAAGGACATGGTTCAAGACAGTAGACCAGCTTCCAATGAATGTTGGCGATAAACATTATGATCCTCTATTTCCATTTGGATTTGGTTTGACTACAAACCTTACCAAATATTGA
Protein sequence

>MS.gene71046.t1

MGKSSIPVVGVLLLCFLVSFSEAEYRKYKDPKVPLNRRIKDLMSRMTLEEKIGQMTQLERSVATPEAMTKYFIGSVLSGGGSVPAEKASAETWVKMVNQIQNAALSTPLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGVTRDPVLIKKIGEATALEVRATGIPYAFAPCIAVCRDPRWGRCYESYSEDPKIVKTMTEIIPGLQGDIPGNSRKGTPFVAGKNKVAACAKHFVGDGGTTKGINENNTVISYKGLLGLHMPAYYDSIIKGVSTVMISYTSWNGKKMHANRDLVTGYLKNKLRFRGFVISDWQGIDRITSPPHANYSYSVEAGVSAGIDMIMVPYNFTEFIDDLTFQVKNNIIPISRIDDAVARILRVKFTMGLFENPLADLSLANQLGSKEHRELAREAVRKSLVLLKNGKYANKPLLPLPKKASKVLVAGSHADNLGNQCGGWTITWQGLSGSDLTTGTTILDAIKQTVDPATEVVYNENPDASFIKSNKFSYAIVIVGEKPYAETFGDSLNLTIPEPGPSTITNVCGSIRCVVVLVTGRPVVIQPYLSKIDALVAAWLPGTEGQGVADVLYGDFEFTGKLARTWFKTVDQLPMNVGDKHYDPLFPFGFGLTTNLTKY