Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71582.t1 | XP_013469944.1 | 98.8 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 1.50E-190 | 675.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71582.t1 | Q9SUG3 | 71.6 | 342 | 93 | 2 | 3 | 342 | 11 | 350 | 5.1e-134 | 478.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71582.t1 | A0A072VQB8 | 98.8 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 1.1e-190 | 675.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050442 | MS.gene71582 | 0.818734 | 1.68E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene71582 | 0.803938 | 2.75E-49 | -1.69E-46 |
| MS.gene050721 | MS.gene71582 | 0.801554 | 8.53E-49 | -1.69E-46 |
| MS.gene050750 | MS.gene71582 | 0.801284 | 9.68E-49 | -1.69E-46 |
| MS.gene050953 | MS.gene71582 | 0.801751 | 7.77E-49 | -1.69E-46 |
| MS.gene051207 | MS.gene71582 | 0.804178 | 2.45E-49 | -1.69E-46 |
| MS.gene052190 | MS.gene71582 | 0.800579 | 1.35E-48 | -1.69E-46 |
| MS.gene052333 | MS.gene71582 | 0.844262 | 8.43E-59 | -1.69E-46 |
| MS.gene053166 | MS.gene71582 | 0.800209 | 1.60E-48 | -1.69E-46 |
| MS.gene054093 | MS.gene71582 | 0.804442 | 2.16E-49 | -1.69E-46 |
| MS.gene054291 | MS.gene71582 | -0.816614 | 5.05E-52 | -1.69E-46 |
| MS.gene054468 | MS.gene71582 | 0.82507 | 5.73E-54 | -1.69E-46 |
| MS.gene055701 | MS.gene71582 | 0.812814 | 3.51E-51 | -1.69E-46 |
| MS.gene056087 | MS.gene71582 | 0.807482 | 4.95E-50 | -1.69E-46 |
| MS.gene056506 | MS.gene71582 | 0.82625 | 3.01E-54 | -1.69E-46 |
| MS.gene057026 | MS.gene71582 | 0.820879 | 5.43E-53 | -1.69E-46 |
| MS.gene059609 | MS.gene71582 | 0.848924 | 4.49E-60 | -1.69E-46 |
| MS.gene061114 | MS.gene71582 | -0.837263 | 5.76E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71582.t1 | MTR_1g105930 | 98.830 | 342 | 4 | 0 | 1 | 342 | 1 | 342 | 0.0 | 688 |
| MS.gene71582.t1 | MTR_1g105930 | 98.400 | 250 | 4 | 0 | 93 | 342 | 63 | 312 | 0.0 | 509 |
| MS.gene71582.t1 | MTR_5g005370 | 80.719 | 306 | 59 | 0 | 30 | 335 | 11 | 316 | 5.58e-175 | 488 |
| MS.gene71582.t1 | MTR_5g005370 | 80.456 | 307 | 60 | 0 | 30 | 336 | 11 | 317 | 4.77e-174 | 488 |
| MS.gene71582.t1 | MTR_5g005370 | 77.778 | 306 | 57 | 1 | 30 | 335 | 11 | 305 | 1.84e-164 | 461 |
| MS.gene71582.t1 | MTR_5g005370 | 80.142 | 282 | 56 | 0 | 54 | 335 | 7 | 288 | 2.58e-158 | 445 |
| MS.gene71582.t1 | MTR_5g005370 | 80.357 | 280 | 55 | 0 | 56 | 335 | 2 | 281 | 2.16e-157 | 442 |
| MS.gene71582.t1 | MTR_8g066720 | 43.827 | 324 | 160 | 7 | 32 | 340 | 8 | 324 | 1.22e-87 | 269 |
| MS.gene71582.t1 | MTR_4g105690 | 43.648 | 307 | 164 | 4 | 33 | 333 | 10 | 313 | 3.58e-85 | 260 |
| MS.gene71582.t1 | MTR_3g067725 | 27.586 | 319 | 201 | 12 | 26 | 319 | 155 | 468 | 6.38e-21 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71582.t1 | AT4G08170 | 71.221 | 344 | 95 | 2 | 1 | 342 | 9 | 350 | 2.78e-167 | 470 |
| MS.gene71582.t1 | AT4G33770 | 68.710 | 310 | 95 | 1 | 30 | 339 | 80 | 387 | 3.74e-148 | 423 |
| MS.gene71582.t1 | AT4G33770 | 66.780 | 295 | 92 | 2 | 45 | 339 | 6 | 294 | 1.32e-135 | 387 |
| MS.gene71582.t1 | AT4G08170 | 76.062 | 259 | 60 | 1 | 84 | 342 | 6 | 262 | 2.76e-135 | 385 |
| MS.gene71582.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene71582.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene71582.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene71582.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene71582.t1 | AT4G08170 | 76.682 | 223 | 50 | 1 | 120 | 342 | 1 | 221 | 1.86e-113 | 328 |
| MS.gene71582.t1 | AT4G33770 | 66.364 | 220 | 72 | 1 | 120 | 339 | 1 | 218 | 1.26e-94 | 281 |
| MS.gene71582.t1 | AT5G16760 | 44.089 | 313 | 166 | 4 | 29 | 335 | 7 | 316 | 8.94e-86 | 261 |
| MS.gene71582.t1 | AT2G43980 | 28.736 | 174 | 118 | 4 | 149 | 319 | 295 | 465 | 1.72e-15 | 77.8 |
Find 66 sgRNAs with CRISPR-Local
Find 267 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTACACTTGTTCTGCTTT+AGG | 0.209814 | 1.4:+81737040 | None:intergenic |
| TTTCATCATTGAAGGATTTC+AGG | 0.216204 | 1.4:-81738971 | MS.gene71582:intron |
| GTAGATATGATTCGTGAATA+TGG | 0.249264 | 1.4:-81737251 | MS.gene71582:CDS |
| ATTGATATCAATTACTTTCC+TGG | 0.288993 | 1.4:-81737206 | MS.gene71582:intron |
| CTTGCAAGAGAAATGAAATT+TGG | 0.289856 | 1.4:+81741476 | None:intergenic |
| TCTTTAAGATTTATATTGTT+GGG | 0.323070 | 1.4:-81737661 | MS.gene71582:CDS |
| TATTGTTGGGGAATACATAA+AGG | 0.342629 | 1.4:-81737648 | MS.gene71582:CDS |
| CTCTTTAAGATTTATATTGT+TGG | 0.359704 | 1.4:-81737662 | MS.gene71582:CDS |
| ACACCCACCAAGACCTTTGT+TGG | 0.369643 | 1.4:-81737411 | MS.gene71582:CDS |
| CCAGCTTTGGTGACTTCATA+AGG | 0.370201 | 1.4:+81738502 | None:intergenic |
| AGCTCGCGTTTACTGATATT+AGG | 0.375570 | 1.4:+81737605 | None:intergenic |
| ATTTGACATTGTCTTGCATA+AGG | 0.382180 | 1.4:-81740120 | MS.gene71582:intron |
| CCTTATGAAGTCACCAAAGC+TGG | 0.387765 | 1.4:-81738502 | MS.gene71582:CDS |
| GGAATCTCACCGGCAATACT+AGG | 0.399683 | 1.4:+81737506 | None:intergenic |
| CGGCAACTTCAACCCAGCTT+TGG | 0.416268 | 1.4:+81738489 | None:intergenic |
| GATCTTGATCCTAGTATTGC+CGG | 0.427389 | 1.4:-81737515 | MS.gene71582:intron |
| CTACAAGAGTTTGTCAATCA+TGG | 0.430927 | 1.4:-81737787 | MS.gene71582:intron |
| TTCAGAGCTTGAACCTCCAC+TGG | 0.437347 | 1.4:-81737812 | MS.gene71582:CDS |
| GTAAAGACATGCTCGTAGTC+TGG | 0.437470 | 1.4:+81737078 | None:intergenic |
| ACTTCATAAGGAATAGTAGA+TGG | 0.444777 | 1.4:+81738514 | None:intergenic |
| AGCCTCTCCAACAAAGGTCT+TGG | 0.445162 | 1.4:+81737404 | None:intergenic |
| AAAAGAGCTTCGTCATAGAT+TGG | 0.446522 | 1.4:-81737378 | MS.gene71582:intron |
| TGGGTCAGAAAATTGTTGTT+GGG | 0.450840 | 1.4:-81741538 | MS.gene71582:CDS |
| CTCTCCAACAAAGGTCTTGG+TGG | 0.458592 | 1.4:+81737407 | None:intergenic |
| TTGGGTCAGAAAATTGTTGT+TGG | 0.460458 | 1.4:-81741539 | MS.gene71582:CDS |
| ATTTGTTCTTTCCAGTTGTT+AGG | 0.472300 | 1.4:-81739901 | MS.gene71582:intron |
| TAGATATGATTCGTGAATAT+GGG | 0.472467 | 1.4:-81737250 | MS.gene71582:CDS |
| GCTGCTGCACATGAAACTCT+TGG | 0.473192 | 1.4:+81737554 | None:intergenic |
| TGTAAATGTTGAATTGCATC+AGG | 0.481257 | 1.4:+81738915 | None:intergenic |
| CAAATTTCATTTCTCTTGCA+AGG | 0.481455 | 1.4:-81741475 | MS.gene71582:intron |
| CACATGAAACTCTTGGAAAA+CGG | 0.483083 | 1.4:+81737561 | None:intergenic |
| TTATGCAAGACAATGTCAAA+TGG | 0.500174 | 1.4:+81740122 | None:intergenic |
| CACCAAGACCTTTGTTGGAG+AGG | 0.502650 | 1.4:-81737406 | MS.gene71582:CDS |
| TCCAGTTGTTAGGCGAGGAA+TGG | 0.516509 | 1.4:-81739891 | MS.gene71582:intron |
| GGATCAAGAACGAATACATC+GGG | 0.519070 | 1.4:+81738939 | None:intergenic |
| CCACATCTTGAAGCATGGAT+TGG | 0.521285 | 1.4:+81738886 | None:intergenic |
| CATCTTGAAGCATGGATTGG+CGG | 0.525990 | 1.4:+81738889 | None:intergenic |
| CTTTAAGATTTATATTGTTG+GGG | 0.527390 | 1.4:-81737660 | MS.gene71582:CDS |
| GCTGGGTTGAAGTTGCCGTT+AGG | 0.530540 | 1.4:-81738484 | MS.gene71582:intron |
| TTTGCAAGCCTCTCCAACAA+AGG | 0.530921 | 1.4:+81737398 | None:intergenic |
| ATCCACCACATCTTGAAGCA+TGG | 0.535346 | 1.4:+81738881 | None:intergenic |
| CCAATCCATGCTTCAAGATG+TGG | 0.557398 | 1.4:-81738886 | MS.gene71582:CDS |
| TTCTTTCCAGTTGTTAGGCG+AGG | 0.558531 | 1.4:-81739896 | MS.gene71582:intron |
| TATGTGTAATGCAGGAGCAA+GGG | 0.560921 | 1.4:-81740194 | MS.gene71582:intron |
| CTTATGAAGTCACCAAAGCT+GGG | 0.565266 | 1.4:-81738501 | MS.gene71582:CDS |
| TTATGTGTAATGCAGGAGCA+AGG | 0.565876 | 1.4:-81740195 | MS.gene71582:intron |
| AGTTGCAAAACCTCTAGTTG+TGG | 0.567026 | 1.4:-81737887 | MS.gene71582:CDS |
| ATCCATGCTTCAAGATGTGG+TGG | 0.574463 | 1.4:-81738883 | MS.gene71582:CDS |
| CGCGAGCTATCAAAAGTCGC+AGG | 0.584140 | 1.4:-81737590 | MS.gene71582:CDS |
| TCTCCAACAAAGGTCTTGGT+GGG | 0.597564 | 1.4:+81737408 | None:intergenic |
| GCACTGCCATCCACAACTAG+AGG | 0.603312 | 1.4:+81737877 | None:intergenic |
| AACAAGCCACTGTCAGAACA+AGG | 0.605835 | 1.4:-81740146 | MS.gene71582:CDS |
| ATGTGTAATGCAGGAGCAAG+GGG | 0.610801 | 1.4:-81740193 | MS.gene71582:intron |
| GCAAAACCTCTAGTTGTGGA+TGG | 0.613529 | 1.4:-81737883 | MS.gene71582:CDS |
| GGAATGGCGAGAGATTATTG+AGG | 0.614262 | 1.4:-81739875 | MS.gene71582:intron |
| CTAAACTTATCTGAGTGCAA+TGG | 0.614593 | 1.4:-81738858 | MS.gene71582:intron |
| AGAAGTGATGGCGAAATCTG+AGG | 0.629932 | 1.4:-81741579 | MS.gene71582:CDS |
| AATGGACCTTGTTCTGACAG+TGG | 0.636759 | 1.4:+81740140 | None:intergenic |
| AACTCTTGTAGAACCAGTGG+AGG | 0.639928 | 1.4:+81737799 | None:intergenic |
| AGGATCAAGAACGAATACAT+CGG | 0.641347 | 1.4:+81738938 | None:intergenic |
| ACAAACTCTTGTAGAACCAG+TGG | 0.644820 | 1.4:+81737796 | None:intergenic |
| TTGTAATAACTAGCTGACGA+GGG | 0.649097 | 1.4:+81738548 | None:intergenic |
| GATTCGTGAATATGGGACGA+AGG | 0.655124 | 1.4:-81737243 | MS.gene71582:CDS |
| GGGAATACATAAAGGTTGTG+AGG | 0.657084 | 1.4:-81737640 | MS.gene71582:CDS |
| TTTGTAATAACTAGCTGACG+AGG | 0.667968 | 1.4:+81738547 | None:intergenic |
| AAATGTTGAATTGCATCAGG+AGG | 0.678092 | 1.4:+81738918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATATGTAATTACTAATT+AGG | - | chr1.4:81739574-81739593 | MS.gene71582:intron | 10.0% |
| !! | AAATATGTAATTACTAATTA+GGG | - | chr1.4:81739575-81739594 | MS.gene71582:intron | 10.0% |
| !!! | AATTAGTAATTACATATTTT+CGG | + | chr1.4:81739574-81739593 | None:intergenic | 10.0% |
| !!! | TTTTTTAACTTTTTGTTTTA+CGG | - | chr1.4:81741510-81741529 | MS.gene71582:CDS | 10.0% |
| !! | AAATTTGAAAGGAAAAAAAA+AGG | + | chr1.4:81740731-81740750 | None:intergenic | 15.0% |
| !! | TATTGTAATTTATCTATTCA+TGG | + | chr1.4:81739508-81739527 | None:intergenic | 15.0% |
| !! | TTAAAAATAGGTTTCATTTA+TGG | - | chr1.4:81738622-81738641 | MS.gene71582:intron | 15.0% |
| !! | TTAATCTAAATAATTTGGTT+AGG | - | chr1.4:81739092-81739111 | MS.gene71582:intron | 15.0% |
| !!! | AACTTAAGCTATATTTTTAT+CGG | - | chr1.4:81738307-81738326 | MS.gene71582:intron | 15.0% |
| !!! | TCTTTAAGATTTATATTGTT+GGG | - | chr1.4:81740979-81740998 | MS.gene71582:intron | 15.0% |
| !!! | TTAAAGTGATTTTTTTTTAG+TGG | - | chr1.4:81737270-81737289 | MS.gene71582:CDS | 15.0% |
| !!! | TTTGTTTTCCTTTTTTATTT+GGG | - | chr1.4:81740938-81740957 | MS.gene71582:intron | 15.0% |
| !!! | TTTTGTTTTCCTTTTTTATT+TGG | - | chr1.4:81740937-81740956 | MS.gene71582:intron | 15.0% |
| !! | AAAACATAAAAAGTAAAACG+TGG | + | chr1.4:81737252-81737271 | None:intergenic | 20.0% |
| !! | AAGAACAAAAAGAAAATCAT+TGG | + | chr1.4:81737209-81737228 | None:intergenic | 20.0% |
| !! | AATCGTTAGTATTATTAGTT+TGG | - | chr1.4:81738897-81738916 | MS.gene71582:CDS | 20.0% |
| !! | ATCAAATTTCTTAAAGAACA+AGG | - | chr1.4:81739253-81739272 | MS.gene71582:intron | 20.0% |
| !! | CAACTTGAAAAAATGAAAAA+AGG | + | chr1.4:81739997-81740016 | None:intergenic | 20.0% |
| !! | CATTTGGTATATAACATTAT+TGG | + | chr1.4:81739309-81739328 | None:intergenic | 20.0% |
| !! | GTATATTATATACTAGCTAT+TGG | - | chr1.4:81740257-81740276 | MS.gene71582:intron | 20.0% |
| !! | TGTGGTTAATCTAAATAATT+TGG | - | chr1.4:81739087-81739106 | MS.gene71582:intron | 20.0% |
| !!! | AAACTCTGTTTTTCTTTTTT+TGG | - | chr1.4:81737382-81737401 | MS.gene71582:CDS | 20.0% |
| !!! | ATCGTTAGTATTATTAGTTT+GGG | - | chr1.4:81738898-81738917 | MS.gene71582:CDS | 20.0% |
| !!! | CTCTTTAAGATTTATATTGT+TGG | - | chr1.4:81740978-81740997 | MS.gene71582:intron | 20.0% |
| !!! | CTTTAAGATTTATATTGTTG+GGG | - | chr1.4:81740980-81740999 | MS.gene71582:intron | 20.0% |
| !!! | TAATTTTTTATGAGAATCAG+AGG | - | chr1.4:81737791-81737810 | MS.gene71582:CDS | 20.0% |
| !!! | TCAACTATTTTTGTACTTTT+TGG | - | chr1.4:81739954-81739973 | MS.gene71582:intron | 20.0% |
| !!! | TTCTTCTTTTATAACATTCA+TGG | - | chr1.4:81738864-81738883 | MS.gene71582:CDS | 20.0% |
| ! | AAAACTTACATGACTTTACA+TGG | - | chr1.4:81737874-81737893 | MS.gene71582:CDS | 25.0% |
| ! | AAATCCTTCAATGATGAAAA+AGG | + | chr1.4:81739668-81739687 | None:intergenic | 25.0% |
| ! | AAATTATTAACACTCAACAG+TGG | - | chr1.4:81738260-81738279 | MS.gene71582:intron | 25.0% |
| ! | AAGAAAAACAGAGTTTACAA+TGG | + | chr1.4:81737378-81737397 | None:intergenic | 25.0% |
| ! | AATAATACATTAAGTACACG+AGG | - | chr1.4:81739407-81739426 | MS.gene71582:intron | 25.0% |
| ! | AATCCTTCAATGATGAAAAA+GGG | + | chr1.4:81739667-81739686 | None:intergenic | 25.0% |
| ! | AGTTGAAATGTTTCATCTTA+TGG | + | chr1.4:81741186-81741205 | None:intergenic | 25.0% |
| ! | ATCTATAAAATAACCAGACA+CGG | + | chr1.4:81739335-81739354 | None:intergenic | 25.0% |
| ! | ATTGATATCAATTACTTTCC+TGG | - | chr1.4:81741434-81741453 | MS.gene71582:intron | 25.0% |
| ! | ATTGTTCATAAGAAAGATAC+CGG | - | chr1.4:81737725-81737744 | MS.gene71582:intron | 25.0% |
| ! | CAAATCAATATTGTCAACTA+TGG | + | chr1.4:81738173-81738192 | None:intergenic | 25.0% |
| ! | CTAAAAATTATGTGTAATGC+AGG | - | chr1.4:81738438-81738457 | MS.gene71582:intron | 25.0% |
| ! | CTAAATAGTAAACCAATCTT+TGG | + | chr1.4:81740591-81740610 | None:intergenic | 25.0% |
| ! | TAAATAATTTGGTTAGGCAT+TGG | - | chr1.4:81739098-81739117 | MS.gene71582:intron | 25.0% |
| ! | TAGATATGATTCGTGAATAT+GGG | - | chr1.4:81741390-81741409 | MS.gene71582:intron | 25.0% |
| ! | TTTGCAACTGAAAATTTGAA+AGG | + | chr1.4:81740742-81740761 | None:intergenic | 25.0% |
| !! | AAAAAGTCAAATTTCTGAAG+AGG | + | chr1.4:81739444-81739463 | None:intergenic | 25.0% |
| !! | ATAACAGTGTTGTTAAATAG+CGG | - | chr1.4:81740312-81740331 | MS.gene71582:intron | 25.0% |
| !! | CATAGTTGACAATATTGATT+TGG | - | chr1.4:81738171-81738190 | MS.gene71582:intron | 25.0% |
| !! | CTGCATTACACATAATTTTT+AGG | + | chr1.4:81738440-81738459 | None:intergenic | 25.0% |
| !! | TACAAGAAATCTAAAAGTGT+CGG | + | chr1.4:81737571-81737590 | None:intergenic | 25.0% |
| !! | TATAATTTGTCTTTGTGAGA+TGG | - | chr1.4:81737768-81737787 | MS.gene71582:intron | 25.0% |
| !! | TTCCTTGTAATTTTAAATCC+CGG | + | chr1.4:81737747-81737766 | None:intergenic | 25.0% |
| !! | TTGACAACATTTTGTACAAA+TGG | + | chr1.4:81740396-81740415 | None:intergenic | 25.0% |
| !!! | AAGTGATTTTTTTTTAGTGG+TGG | - | chr1.4:81737273-81737292 | MS.gene71582:intron | 25.0% |
| !!! | AATATTGATTTGGATAGTCA+AGG | - | chr1.4:81738181-81738200 | MS.gene71582:intron | 25.0% |
| !!! | AGTGATTTTTTTTTAGTGGT+GGG | - | chr1.4:81737274-81737293 | MS.gene71582:intron | 25.0% |
| !!! | ATTTTTATCGGTTCAATGTT+TGG | - | chr1.4:81738319-81738338 | MS.gene71582:intron | 25.0% |
| !!! | CTTTTGTTGTTACTTTTTGT+CGG | - | chr1.4:81737407-81737426 | MS.gene71582:CDS | 25.0% |
| !!! | GTTAACTACTGTTGTTTTAT+AGG | - | chr1.4:81740057-81740076 | MS.gene71582:intron | 25.0% |
| !!! | TTGTTTTATTAGCCAAAGAT+TGG | - | chr1.4:81740576-81740595 | MS.gene71582:intron | 25.0% |
| AAAACCTTGTTGCTAAATGA+GGG | + | chr1.4:81738005-81738024 | None:intergenic | 30.0% | |
| AATAACACACAGAATGATTG+CGG | + | chr1.4:81740899-81740918 | None:intergenic | 30.0% | |
| AATCTTCTGATTATCCTGAT+TGG | - | chr1.4:81740644-81740663 | MS.gene71582:intron | 30.0% | |
| AATTTCTTAAAGAACAAGGC+TGG | - | chr1.4:81739257-81739276 | MS.gene71582:intron | 30.0% | |
| ACAGACAATAATTCGTTCTT+TGG | + | chr1.4:81739137-81739156 | None:intergenic | 30.0% | |
| ACTATCACAATAATATGGCA+TGG | - | chr1.4:81739228-81739247 | MS.gene71582:intron | 30.0% | |
| ACTTCATAAGGAATAGTAGA+TGG | + | chr1.4:81740129-81740148 | None:intergenic | 30.0% | |
| ACTTGTTTGAATACTTGGTT+TGG | + | chr1.4:81739054-81739073 | None:intergenic | 30.0% | |
| AGATATAATGAAAGCTGCAT+CGG | - | chr1.4:81739355-81739374 | MS.gene71582:intron | 30.0% | |
| ATATCCGAATGATACAAACA+AGG | + | chr1.4:81740544-81740563 | None:intergenic | 30.0% | |
| ATCCTTCAATGATGAAAAAG+GGG | + | chr1.4:81739666-81739685 | None:intergenic | 30.0% | |
| ATCTATTCATGGAACTATTC+AGG | + | chr1.4:81739497-81739516 | None:intergenic | 30.0% | |
| ATCTTCTGATTATCCTGATT+GGG | - | chr1.4:81740645-81740664 | MS.gene71582:intron | 30.0% | |
| ATTTGACATTGTCTTGCATA+AGG | - | chr1.4:81738520-81738539 | MS.gene71582:CDS | 30.0% | |
| ATTTGTTCTTTCCAGTTGTT+AGG | - | chr1.4:81738739-81738758 | MS.gene71582:intron | 30.0% | |
| CAAAATTTATGCTCAACCTT+TGG | - | chr1.4:81737664-81737683 | MS.gene71582:CDS | 30.0% | |
| CAAATTTCATTTCTCTTGCA+AGG | - | chr1.4:81737165-81737184 | MS.gene71582:intron | 30.0% | |
| CAGACAATAATTCGTTCTTT+GGG | + | chr1.4:81739136-81739155 | None:intergenic | 30.0% | |
| CCATCAAAATACAAACTTCA+TGG | + | chr1.4:81739625-81739644 | None:intergenic | 30.0% | |
| CTTGCAAGAGAAATGAAATT+TGG | + | chr1.4:81737167-81737186 | None:intergenic | 30.0% | |
| CTTGTTTGAATACTTGGTTT+GGG | + | chr1.4:81739053-81739072 | None:intergenic | 30.0% | |
| GCTATGAATATTTGGAAGAA+AGG | + | chr1.4:81739548-81739567 | None:intergenic | 30.0% | |
| GTACAATCCTAAAACTTTCA+GGG | + | chr1.4:81739863-81739882 | None:intergenic | 30.0% | |
| GTAGATATGATTCGTGAATA+TGG | - | chr1.4:81741389-81741408 | MS.gene71582:intron | 30.0% | |
| TACAAACTTCATGGAGAATT+TGG | + | chr1.4:81739616-81739635 | None:intergenic | 30.0% | |
| TACAAGTACAATGTGAAAGT+AGG | + | chr1.4:81738814-81738833 | None:intergenic | 30.0% | |
| TACAATCCTAAAACTTTCAG+GGG | + | chr1.4:81739862-81739881 | None:intergenic | 30.0% | |
| TAGCGACTATCACAATAATA+TGG | - | chr1.4:81739223-81739242 | MS.gene71582:intron | 30.0% | |
| TATAACTTATCTGCATTCCA+TGG | - | chr1.4:81741461-81741480 | MS.gene71582:intron | 30.0% | |
| TATTGTTGGGGAATACATAA+AGG | - | chr1.4:81740992-81741011 | MS.gene71582:intron | 30.0% | |
| TCTCTAGACTAGAATATATC+TGG | - | chr1.4:81740216-81740235 | MS.gene71582:intron | 30.0% | |
| TGAAATGTTTCATCTTATGG+TGG | + | chr1.4:81741183-81741202 | None:intergenic | 30.0% | |
| TGCAATGTCCCAAATAAAAA+AGG | + | chr1.4:81740949-81740968 | None:intergenic | 30.0% | |
| TGTAAATGTTGAATTGCATC+AGG | + | chr1.4:81739728-81739747 | None:intergenic | 30.0% | |
| TGTACAATCCTAAAACTTTC+AGG | + | chr1.4:81739864-81739883 | None:intergenic | 30.0% | |
| TTATGCAAGACAATGTCAAA+TGG | + | chr1.4:81738521-81738540 | None:intergenic | 30.0% | |
| TTCTTGTAAACATACCAAAC+TGG | - | chr1.4:81737583-81737602 | MS.gene71582:CDS | 30.0% | |
| TTGTTCATAAGAAAGATACC+GGG | - | chr1.4:81737726-81737745 | MS.gene71582:intron | 30.0% | |
| TTTCATCATTGAAGGATTTC+AGG | - | chr1.4:81739669-81739688 | MS.gene71582:intron | 30.0% | |
| ! | ACAATTTTCTGACCCAAAAA+CGG | + | chr1.4:81737098-81737117 | None:intergenic | 30.0% |
| ! | ACGAATTATTGTCTGTCTTT+TGG | - | chr1.4:81739141-81739160 | MS.gene71582:intron | 30.0% |
| ! | AGAACCTTGTTTGTATCATT+CGG | - | chr1.4:81740537-81740556 | MS.gene71582:intron | 30.0% |
| ! | ATATCAAACAAGAGCACAAA+AGG | + | chr1.4:81738213-81738232 | None:intergenic | 30.0% |
| ! | ATATTGTCAACTATGGATTG+CGG | + | chr1.4:81738166-81738185 | None:intergenic | 30.0% |
| ! | ATATTTGAAACAACCCAATC+AGG | + | chr1.4:81740661-81740680 | None:intergenic | 30.0% |
| ! | CAAAGGTTGAGCATAAATTT+TGG | + | chr1.4:81737666-81737685 | None:intergenic | 30.0% |
| ! | TACCGGGATTTAAAATTACA+AGG | - | chr1.4:81737742-81737761 | MS.gene71582:intron | 30.0% |
| ! | TTGACTCTTGATCTTTTGAT+TGG | - | chr1.4:81737931-81737950 | MS.gene71582:intron | 30.0% |
| ! | TTGTTTGAATACTTGGTTTG+GGG | + | chr1.4:81739052-81739071 | None:intergenic | 30.0% |
| !! | CACATAATTTTTAGGCATTC+AGG | + | chr1.4:81738432-81738451 | None:intergenic | 30.0% |
| !! | CCATGAAGTTTGTATTTTGA+TGG | - | chr1.4:81739622-81739641 | MS.gene71582:intron | 30.0% |
| !! | GGTAATCTTGTTATTGTCTT+TGG | - | chr1.4:81737616-81737635 | MS.gene71582:CDS | 30.0% |
| !! | TACATGGTTCAAAGTTTTGA+TGG | - | chr1.4:81738389-81738408 | MS.gene71582:intron | 30.0% |
| !! | TTATGGTTTTGCTGAATTTG+TGG | - | chr1.4:81738639-81738658 | MS.gene71582:intron | 30.0% |
| !!! | GAATTTTTTTGGAATCTCAC+CGG | + | chr1.4:81741147-81741166 | None:intergenic | 30.0% |
| !!! | GTGATTTTTTTTTAGTGGTG+GGG | - | chr1.4:81737275-81737294 | MS.gene71582:intron | 30.0% |
| !!! | TGTTACTTTTTGTCGGTATA+TGG | - | chr1.4:81737414-81737433 | MS.gene71582:CDS | 30.0% |
| !!! | TTTTTTATTTGGGACATTGC+AGG | - | chr1.4:81740948-81740967 | MS.gene71582:intron | 30.0% |
| AAAAGAGCTTCGTCATAGAT+TGG | - | chr1.4:81741262-81741281 | MS.gene71582:intron | 35.0% | |
| AAATGTTGAATTGCATCAGG+AGG | + | chr1.4:81739725-81739744 | None:intergenic | 35.0% | |
| AATGTTTCATCTTATGGTGG+TGG | + | chr1.4:81741180-81741199 | None:intergenic | 35.0% | |
| ACCAAGTATTCAAACAAGTG+AGG | - | chr1.4:81739055-81739074 | MS.gene71582:intron | 35.0% | |
| AGGATCAAGAACGAATACAT+CGG | + | chr1.4:81739705-81739724 | None:intergenic | 35.0% | |
| AGTCAAAGATACACACCTAA+CGG | + | chr1.4:81740174-81740193 | None:intergenic | 35.0% | |
| CACATGAAACTCTTGGAAAA+CGG | + | chr1.4:81741082-81741101 | None:intergenic | 35.0% | |
| CTAAACTTATCTGAGTGCAA+TGG | - | chr1.4:81739782-81739801 | MS.gene71582:intron | 35.0% | |
| CTACAAGAGTTTGTCAATCA+TGG | - | chr1.4:81740853-81740872 | MS.gene71582:intron | 35.0% | |
| CTGTGTAGTGTATTATTTGC+TGG | - | chr1.4:81737328-81737347 | MS.gene71582:intron | 35.0% | |
| GAAAACCTTGTTGCTAAATG+AGG | + | chr1.4:81738006-81738025 | None:intergenic | 35.0% | |
| GCAGATAAGTTATACTTACC+AGG | + | chr1.4:81741455-81741474 | None:intergenic | 35.0% | |
| GTATTAGTAAATCATCGCCT+AGG | + | chr1.4:81741329-81741348 | None:intergenic | 35.0% | |
| TACCAAGAAACAAACCAGTT+TGG | + | chr1.4:81737600-81737619 | None:intergenic | 35.0% | |
| TATTCATGGAACTATTCAGG+AGG | + | chr1.4:81739494-81739513 | None:intergenic | 35.0% | |
| TCCTCACTTGTTTGAATACT+TGG | + | chr1.4:81739059-81739078 | None:intergenic | 35.0% | |
| TCTATGCAAGAATGCTATAG+AGG | + | chr1.4:81738120-81738139 | None:intergenic | 35.0% | |
| TCTGATCATGATTCATGATG+AGG | + | chr1.4:81739014-81739033 | None:intergenic | 35.0% | |
| TCTTACACTTGTTCTGCTTT+AGG | + | chr1.4:81741603-81741622 | None:intergenic | 35.0% | |
| TGCAACCATATTTCTTTCCT+AGG | - | chr1.4:81741309-81741328 | MS.gene71582:intron | 35.0% | |
| TTCGGTGAGCTATGAATATT+TGG | + | chr1.4:81739556-81739575 | None:intergenic | 35.0% | |
| TTGAACCATGTATTCAACCA+AGG | + | chr1.4:81738381-81738400 | None:intergenic | 35.0% | |
| TTGAGCTACAGACATTACAT+CGG | + | chr1.4:81737520-81737539 | None:intergenic | 35.0% | |
| TTGATTTCTGTCATAGACCA+TGG | + | chr1.4:81741481-81741500 | None:intergenic | 35.0% | |
| TTGGGTCAGAAAATTGTTGT+TGG | - | chr1.4:81737101-81737120 | MS.gene71582:intron | 35.0% | |
| TTGTAATAACTAGCTGACGA+GGG | + | chr1.4:81740095-81740114 | None:intergenic | 35.0% | |
| TTGTCAAATAGCAGCTATAG+CGG | - | chr1.4:81740409-81740428 | MS.gene71582:intron | 35.0% | |
| TTTGTAATAACTAGCTGACG+AGG | + | chr1.4:81740096-81740115 | None:intergenic | 35.0% | |
| TTTGTACAAATGGCATATCG+TGG | + | chr1.4:81740386-81740405 | None:intergenic | 35.0% | |
| ! | AATGAGGGCATAAATGATTG+CGG | + | chr1.4:81737990-81738009 | None:intergenic | 35.0% |
| ! | ATTTTTCCATACCCTGCATT+CGG | + | chr1.4:81741541-81741560 | None:intergenic | 35.0% |
| ! | TGGGTCAGAAAATTGTTGTT+GGG | - | chr1.4:81737102-81737121 | MS.gene71582:intron | 35.0% |
| !! | ATAATTTGGTTAGGCATTGG+TGG | - | chr1.4:81739101-81739120 | MS.gene71582:intron | 35.0% |
| !! | CAAGTGAGGATTTACTTTTG+TGG | - | chr1.4:81739069-81739088 | MS.gene71582:intron | 35.0% |
| !! | CAAGTTGATTATGTATCGCA+TGG | - | chr1.4:81740010-81740029 | MS.gene71582:intron | 35.0% |
| !! | CAATGTATGAGTTTTGACCT+CGG | + | chr1.4:81737709-81737728 | None:intergenic | 35.0% |
| !! | TACCAAACTGGTTTGTTTCT+TGG | - | chr1.4:81737595-81737614 | MS.gene71582:CDS | 35.0% |
| !! | TGTTTGAATACTTGGTTTGG+GGG | + | chr1.4:81739051-81739070 | None:intergenic | 35.0% |
| !! | TTCCCCTTTTTCATCATTGA+AGG | - | chr1.4:81739661-81739680 | MS.gene71582:intron | 35.0% |
| !!! | CTACTGTTGTTTTATAGGCA+AGG | - | chr1.4:81740062-81740081 | MS.gene71582:intron | 35.0% |
| !!! | TGTATTTTGATGGAGCTGAT+TGG | - | chr1.4:81739632-81739651 | MS.gene71582:intron | 35.0% |
| !!! | TGTTGTTTTATAGGCAAGGT+TGG | - | chr1.4:81740066-81740085 | MS.gene71582:intron | 35.0% |
| ACAAACTCTTGTAGAACCAG+TGG | + | chr1.4:81740847-81740866 | None:intergenic | 40.0% | |
| AGCTCGCGTTTACTGATATT+AGG | + | chr1.4:81741038-81741057 | None:intergenic | 40.0% | |
| AGTTGCAAAACCTCTAGTTG+TGG | - | chr1.4:81740753-81740772 | MS.gene71582:intron | 40.0% | |
| ATAATGAAAGCTGCATCGGA+GGG | - | chr1.4:81739359-81739378 | MS.gene71582:intron | 40.0% | |
| CACTTCCTTGGTTGAATACA+TGG | - | chr1.4:81738373-81738392 | MS.gene71582:intron | 40.0% | |
| CATCGCCTAGGAAAGAAATA+TGG | + | chr1.4:81741317-81741336 | None:intergenic | 40.0% | |
| CATGTATTCAACCAAGGAAG+TGG | + | chr1.4:81738375-81738394 | None:intergenic | 40.0% | |
| CATTAAGTACACGAGGAATC+TGG | - | chr1.4:81739414-81739433 | MS.gene71582:intron | 40.0% | |
| CGAAGAAGAAGAAGAAGTGA+TGG | - | chr1.4:81737049-81737068 | MS.gene71582:CDS | 40.0% | |
| CGTACATCTTGCTCTTGTAT+TGG | - | chr1.4:81739922-81739941 | MS.gene71582:intron | 40.0% | |
| CTAAAACTTTCAGGGGAGAT+TGG | + | chr1.4:81739855-81739874 | None:intergenic | 40.0% | |
| CTCAATATGGACAACTCCAA+AGG | + | chr1.4:81737683-81737702 | None:intergenic | 40.0% | |
| CTTATGAAGTCACCAAAGCT+GGG | - | chr1.4:81740139-81740158 | MS.gene71582:CDS | 40.0% | |
| GAATTGCAATGCCGTCTATA+GGG | - | chr1.4:81741350-81741369 | MS.gene71582:intron | 40.0% | |
| GATCTTGATCCTAGTATTGC+CGG | - | chr1.4:81741125-81741144 | MS.gene71582:intron | 40.0% | |
| GGATCAAGAACGAATACATC+GGG | + | chr1.4:81739704-81739723 | None:intergenic | 40.0% | |
| TATAATGAAAGCTGCATCGG+AGG | - | chr1.4:81739358-81739377 | MS.gene71582:intron | 40.0% | |
| TATGCCCTCATTTAGCAACA+AGG | - | chr1.4:81737998-81738017 | MS.gene71582:intron | 40.0% | |
| TATGTGTAATGCAGGAGCAA+GGG | - | chr1.4:81738446-81738465 | MS.gene71582:intron | 40.0% | |
| TGAATTGCAATGCCGTCTAT+AGG | - | chr1.4:81741349-81741368 | MS.gene71582:intron | 40.0% | |
| TGTGTAGTATCCAGAAGATG+TGG | + | chr1.4:81738959-81738978 | None:intergenic | 40.0% | |
| TTATGTGTAATGCAGGAGCA+AGG | - | chr1.4:81738445-81738464 | MS.gene71582:intron | 40.0% | |
| TTGACCTCGGATTCTCAATA+TGG | + | chr1.4:81737696-81737715 | None:intergenic | 40.0% | |
| TTGTCCATATTGAGAATCCG+AGG | - | chr1.4:81737689-81737708 | MS.gene71582:intron | 40.0% | |
| TTTGGGAGTTGAGTATGACA+TGG | - | chr1.4:81738915-81738934 | MS.gene71582:CDS | 40.0% | |
| ! | ACTATGGATTGCGGAAATAG+AGG | + | chr1.4:81738157-81738176 | None:intergenic | 40.0% |
| ! | ATGTTTGGAGTTACCACTGT+CGG | - | chr1.4:81738334-81738353 | MS.gene71582:intron | 40.0% |
| ! | CAATCTCCCCTGAAAGTTTT+AGG | - | chr1.4:81739853-81739872 | MS.gene71582:intron | 40.0% |
| ! | TTACGGTTTTTCCGAATGCA+GGG | - | chr1.4:81741527-81741546 | MS.gene71582:CDS | 40.0% |
| ! | TTTACGGTTTTTCCGAATGC+AGG | - | chr1.4:81741526-81741545 | MS.gene71582:CDS | 40.0% |
| ! | TTTATTTGGGACATTGCAGG+TGG | - | chr1.4:81740951-81740970 | MS.gene71582:intron | 40.0% |
| !! | TAGCAGCTATAGCGGATTAA+CGG | - | chr1.4:81740417-81740436 | MS.gene71582:intron | 40.0% |
| !! | TTTCATCTTATGGTGGTGGT+GGG | + | chr1.4:81741176-81741195 | None:intergenic | 40.0% |
| !!! | GTGGGAAAGGGGAATTTTTT+TGG | + | chr1.4:81741158-81741177 | None:intergenic | 40.0% |
| AACAAGCCACTGTCAGAACA+AGG | - | chr1.4:81738494-81738513 | MS.gene71582:CDS | 45.0% | |
| AACCAATCAATGCCGCAGAA+AGG | + | chr1.4:81740285-81740304 | None:intergenic | 45.0% | |
| AACTCTTGTAGAACCAGTGG+AGG | + | chr1.4:81740844-81740863 | None:intergenic | 45.0% | |
| AATGGACCTTGTTCTGACAG+TGG | + | chr1.4:81738503-81738522 | None:intergenic | 45.0% | |
| ACAAGCGAAGTCCCTATAGA+CGG | + | chr1.4:81741364-81741383 | None:intergenic | 45.0% | |
| ACGCTACAGCACAGATGATT+TGG | + | chr1.4:81738037-81738056 | None:intergenic | 45.0% | |
| ATACCAAATGCAACCGTGTC+TGG | - | chr1.4:81739319-81739338 | MS.gene71582:intron | 45.0% | |
| ATCCACCACATCTTGAAGCA+TGG | + | chr1.4:81739762-81739781 | None:intergenic | 45.0% | |
| ATCCAGAAGATGTGGTTGTC+CGG | + | chr1.4:81738951-81738970 | None:intergenic | 45.0% | |
| ATCCATGCTTCAAGATGTGG+TGG | - | chr1.4:81739757-81739776 | MS.gene71582:intron | 45.0% | |
| ATGTGTAATGCAGGAGCAAG+GGG | - | chr1.4:81738447-81738466 | MS.gene71582:intron | 45.0% | |
| ATTCAACCAAGGAAGTGGTC+AGG | + | chr1.4:81738370-81738389 | None:intergenic | 45.0% | |
| CCAATCCATGCTTCAAGATG+TGG | - | chr1.4:81739754-81739773 | MS.gene71582:intron | 45.0% | |
| CCACATCTTGAAGCATGGAT+TGG | + | chr1.4:81739757-81739776 | None:intergenic | 45.0% | |
| CCTTATGAAGTCACCAAAGC+TGG | - | chr1.4:81740138-81740157 | MS.gene71582:CDS | 45.0% | |
| CGCTACAGCACAGATGATTT+GGG | + | chr1.4:81738036-81738055 | None:intergenic | 45.0% | |
| GAGTATGACATGGAGGTGAT+TGG | - | chr1.4:81738925-81738944 | MS.gene71582:CDS | 45.0% | |
| GAGTCAGTGTTGTCAATAGC+AGG | + | chr1.4:81740495-81740514 | None:intergenic | 45.0% | |
| GATGACTAACTTCTGACAGC+TGG | - | chr1.4:81739381-81739400 | MS.gene71582:intron | 45.0% | |
| GATTCGTGAATATGGGACGA+AGG | - | chr1.4:81741397-81741416 | MS.gene71582:intron | 45.0% | |
| GCAAAACCTCTAGTTGTGGA+TGG | - | chr1.4:81740757-81740776 | MS.gene71582:intron | 45.0% | |
| GCTGTAGCGTAATAGTGTTG+TGG | - | chr1.4:81738047-81738066 | MS.gene71582:intron | 45.0% | |
| GGAATGGCGAGAGATTATTG+AGG | - | chr1.4:81738765-81738784 | MS.gene71582:intron | 45.0% | |
| GTAAAGACATGCTCGTAGTC+TGG | + | chr1.4:81741565-81741584 | None:intergenic | 45.0% | |
| GTGGTTGATCTCAGTAGAAG+TGG | - | chr1.4:81738279-81738298 | MS.gene71582:intron | 45.0% | |
| GTGTTGTCAATAGCAGGTCA+CGG | + | chr1.4:81740489-81740508 | None:intergenic | 45.0% | |
| TAACCAGACACGGTTGCATT+TGG | + | chr1.4:81739325-81739344 | None:intergenic | 45.0% | |
| TAGCTATTGGCACCTTTCTG+CGG | - | chr1.4:81740270-81740289 | MS.gene71582:intron | 45.0% | |
| TCTCCAACAAAGGTCTTGGT+GGG | + | chr1.4:81741235-81741254 | None:intergenic | 45.0% | |
| TGAAAGTAGGCTGAAGTGAG+TGG | + | chr1.4:81738801-81738820 | None:intergenic | 45.0% | |
| TTCTTTCCAGTTGTTAGGCG+AGG | - | chr1.4:81738744-81738763 | MS.gene71582:intron | 45.0% | |
| TTTGCAAGCCTCTCCAACAA+AGG | + | chr1.4:81741245-81741264 | None:intergenic | 45.0% | |
| ! | AGAAGTGATGGCGAAATCTG+AGG | - | chr1.4:81737061-81737080 | MS.gene71582:CDS | 45.0% |
| ! | CCAGCTTTGGTGACTTCATA+AGG | + | chr1.4:81740141-81740160 | None:intergenic | 45.0% |
| ! | GTTTTACCTGACCACTTCCT+TGG | - | chr1.4:81738361-81738380 | MS.gene71582:intron | 45.0% |
| ! | GTTTTTCCGAATGCAGGGTA+TGG | - | chr1.4:81741532-81741551 | MS.gene71582:CDS | 45.0% |
| ! | TGTTTGGAGTTACCACTGTC+GGG | - | chr1.4:81738335-81738354 | MS.gene71582:intron | 45.0% |
| !! | CATCTTGAAGCATGGATTGG+CGG | + | chr1.4:81739754-81739773 | None:intergenic | 45.0% |
| !! | CTAAAAGTGTCGGTCACGAA+TGG | + | chr1.4:81737561-81737580 | None:intergenic | 45.0% |
| !! | GTGAGTACGACACCGTTTTT+GGG | - | chr1.4:81737083-81737102 | MS.gene71582:CDS | 45.0% |
| !! | GTTTCATCTTATGGTGGTGG+TGG | + | chr1.4:81741177-81741196 | None:intergenic | 45.0% |
| !!! | GTTTTTTTTTTTTTAAAAAT+AGG | - | chr1.4:81738610-81738629 | MS.gene71582:intron | 5.0% |
| ACACCCACCAAGACCTTTGT+TGG | - | chr1.4:81741229-81741248 | MS.gene71582:intron | 50.0% | |
| AGCCTCTCCAACAAAGGTCT+TGG | + | chr1.4:81741239-81741258 | None:intergenic | 50.0% | |
| ATGACATGGAGGTGATTGGC+CGG | - | chr1.4:81738929-81738948 | MS.gene71582:CDS | 50.0% | |
| CACCAAGACCTTTGTTGGAG+AGG | - | chr1.4:81741234-81741253 | MS.gene71582:intron | 50.0% | |
| CTCTCCAACAAAGGTCTTGG+TGG | + | chr1.4:81741236-81741255 | None:intergenic | 50.0% | |
| GCTGCTGCACATGAAACTCT+TGG | + | chr1.4:81741089-81741108 | None:intergenic | 50.0% | |
| GCTGGCTGAGCTTATAGGTT+AGG | - | chr1.4:81739275-81739294 | MS.gene71582:intron | 50.0% | |
| GGAATCTCACCGGCAATACT+AGG | + | chr1.4:81741137-81741156 | None:intergenic | 50.0% | |
| GGGAGTTGAGTATGACATGG+AGG | - | chr1.4:81738918-81738937 | MS.gene71582:CDS | 50.0% | |
| TCCAGTTGTTAGGCGAGGAA+TGG | - | chr1.4:81738749-81738768 | MS.gene71582:intron | 50.0% | |
| TTCAGAGCTTGAACCTCCAC+TGG | - | chr1.4:81740828-81740847 | MS.gene71582:intron | 50.0% | |
| ! | ACAAGGCTGGCTGAGCTTAT+AGG | - | chr1.4:81739270-81739289 | MS.gene71582:intron | 50.0% |
| ! | GGTGAGTACGACACCGTTTT+TGG | - | chr1.4:81737082-81737101 | MS.gene71582:CDS | 50.0% |
| ! | GTTTGGAGTTACCACTGTCG+GGG | - | chr1.4:81738336-81738355 | MS.gene71582:intron | 50.0% |
| ! | TTTGGAGTTACCACTGTCGG+GGG | - | chr1.4:81738337-81738356 | MS.gene71582:intron | 50.0% |
| !! | AGCGGATTAACGGCGCTATA+GGG | - | chr1.4:81740427-81740446 | MS.gene71582:intron | 50.0% |
| !! | CACCTTTCTGCGGCATTGAT+TGG | - | chr1.4:81740280-81740299 | MS.gene71582:intron | 50.0% |
| !! | CTTATGGTGGTGGTGGGAAA+GGG | + | chr1.4:81741170-81741189 | None:intergenic | 50.0% |
| !! | TAGCGGATTAACGGCGCTAT+AGG | - | chr1.4:81740426-81740445 | MS.gene71582:intron | 50.0% |
| !! | TCTTATGGTGGTGGTGGGAA+AGG | + | chr1.4:81741171-81741190 | None:intergenic | 50.0% |
| !! | TTATGGTGGTGGTGGGAAAG+GGG | + | chr1.4:81741169-81741188 | None:intergenic | 50.0% |
| AGGTAAAACTCCCCCGACAG+TGG | + | chr1.4:81738350-81738369 | None:intergenic | 55.0% | |
| ATAGCAGCGCTACAGCACAG+TGG | - | chr1.4:81740337-81740356 | MS.gene71582:intron | 55.0% | |
| CGCGAGCTATCAAAAGTCGC+AGG | - | chr1.4:81741050-81741069 | MS.gene71582:intron | 55.0% | |
| CGGCAACTTCAACCCAGCTT+TGG | + | chr1.4:81740154-81740173 | None:intergenic | 55.0% | |
| GCACTGCCATCCACAACTAG+AGG | + | chr1.4:81740766-81740785 | None:intergenic | 55.0% | |
| GCCATTCCTCGCCTAACAAC+TGG | + | chr1.4:81738753-81738772 | None:intergenic | 55.0% | |
| TGTCGGTCACGAATGGAGCT+CGG | + | chr1.4:81737554-81737573 | None:intergenic | 55.0% | |
| ! | GCTGGGTTGAAGTTGCCGTT+AGG | - | chr1.4:81740156-81740175 | MS.gene71582:CDS | 55.0% |
| GGCCGGACAACCACATCTTC+TGG | - | chr1.4:81738946-81738965 | MS.gene71582:CDS | 60.0% | |
| GTCGGTCACGAATGGAGCTC+GGG | + | chr1.4:81737553-81737572 | None:intergenic | 60.0% | |
| TCGGTCACGAATGGAGCTCG+GGG | + | chr1.4:81737552-81737571 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 81737023 | 81741639 | 81737023 | ID=MS.gene71582 |
| chr1.4 | mRNA | 81737023 | 81741639 | 81737023 | ID=MS.gene71582.t1;Parent=MS.gene71582 |
| chr1.4 | exon | 81741476 | 81741639 | 81741476 | ID=MS.gene71582.t1.exon1;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81741476 | 81741639 | 81741476 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81740121 | 81740202 | 81740121 | ID=MS.gene71582.t1.exon2;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81740121 | 81740202 | 81740121 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81739876 | 81739908 | 81739876 | ID=MS.gene71582.t1.exon3;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81739876 | 81739908 | 81739876 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81738859 | 81738979 | 81738859 | ID=MS.gene71582.t1.exon4;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81738859 | 81738979 | 81738859 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81738485 | 81738583 | 81738485 | ID=MS.gene71582.t1.exon5;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81738485 | 81738583 | 81738485 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81737788 | 81737907 | 81737788 | ID=MS.gene71582.t1.exon6;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81737788 | 81737907 | 81737788 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81737516 | 81737692 | 81737516 | ID=MS.gene71582.t1.exon7;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81737516 | 81737692 | 81737516 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81737379 | 81737434 | 81737379 | ID=MS.gene71582.t1.exon8;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81737379 | 81737434 | 81737379 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81737207 | 81737291 | 81737207 | ID=MS.gene71582.t1.exon9;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81737207 | 81737291 | 81737207 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| chr1.4 | exon | 81737023 | 81737114 | 81737023 | ID=MS.gene71582.t1.exon10;Parent=MS.gene71582.t1 |
| chr1.4 | CDS | 81737023 | 81737114 | 81737023 | ID=cds.MS.gene71582.t1;Parent=MS.gene71582.t1 |
| Gene Sequence |
| Protein sequence |
