Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71758.t1 | XP_013470121.1 | 98.2 | 391 | 3 | 1 | 1 | 387 | 1 | 391 | 4.30E-213 | 750.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71758.t1 | Q9ZU52 | 84.7 | 391 | 56 | 2 | 1 | 387 | 1 | 391 | 7.2e-185 | 647.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71758.t1 | A0A072VQ58 | 98.2 | 391 | 3 | 1 | 1 | 387 | 1 | 391 | 3.1e-213 | 750.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04932 | MS.gene71758 | 0.800847 | 1.19E-48 | -1.69E-46 |
| MS.gene05240 | MS.gene71758 | 0.825658 | 4.16E-54 | -1.69E-46 |
| MS.gene052702 | MS.gene71758 | 0.826208 | 3.08E-54 | -1.69E-46 |
| MS.gene054742 | MS.gene71758 | 0.819955 | 8.85E-53 | -1.69E-46 |
| MS.gene056590 | MS.gene71758 | 0.800249 | 1.57E-48 | -1.69E-46 |
| MS.gene057440 | MS.gene71758 | 0.811628 | 6.37E-51 | -1.69E-46 |
| MS.gene057494 | MS.gene71758 | 0.809835 | 1.56E-50 | -1.69E-46 |
| MS.gene060087 | MS.gene71758 | 0.805509 | 1.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71758 | MS.gene003647 | PPI |
| MS.gene23350 | MS.gene71758 | PPI |
| MS.gene71758 | MS.gene23352 | PPI |
| MS.gene71758 | MS.gene50712 | PPI |
| MS.gene71758 | MS.gene062923 | PPI |
| MS.gene71758 | MS.gene062925 | PPI |
| MS.gene71758 | MS.gene50709 | PPI |
| MS.gene003645 | MS.gene71758 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71758.t1 | MTR_1g109200 | 98.210 | 391 | 3 | 1 | 1 | 387 | 1 | 391 | 0.0 | 782 |
| MS.gene71758.t1 | MTR_4g071860 | 81.972 | 355 | 63 | 1 | 34 | 387 | 46 | 400 | 0.0 | 608 |
| MS.gene71758.t1 | MTR_4g057670 | 81.690 | 355 | 64 | 1 | 34 | 387 | 46 | 400 | 0.0 | 607 |
| MS.gene71758.t1 | MTR_4g071880 | 75.843 | 356 | 73 | 3 | 33 | 387 | 43 | 386 | 0.0 | 544 |
| MS.gene71758.t1 | MTR_5g069055 | 54.494 | 356 | 157 | 4 | 36 | 387 | 4 | 358 | 1.80e-134 | 389 |
| MS.gene71758.t1 | MTR_5g096670 | 55.271 | 351 | 153 | 3 | 40 | 387 | 8 | 357 | 6.81e-134 | 387 |
| MS.gene71758.t1 | MTR_1g061050 | 53.090 | 356 | 162 | 4 | 36 | 387 | 4 | 358 | 1.93e-129 | 376 |
| MS.gene71758.t1 | MTR_5g069050 | 53.143 | 350 | 144 | 5 | 42 | 387 | 51 | 384 | 5.59e-123 | 360 |
| MS.gene71758.t1 | MTR_7g103920 | 47.253 | 91 | 24 | 1 | 145 | 235 | 12 | 78 | 5.10e-20 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71758.t1 | AT2G01140 | 84.655 | 391 | 56 | 2 | 1 | 387 | 1 | 391 | 0.0 | 675 |
| MS.gene71758.t1 | AT4G38970 | 77.546 | 383 | 80 | 2 | 11 | 387 | 16 | 398 | 0.0 | 615 |
| MS.gene71758.t1 | AT2G21330 | 74.872 | 390 | 91 | 3 | 5 | 387 | 10 | 399 | 0.0 | 601 |
| MS.gene71758.t1 | AT2G21330 | 72.308 | 390 | 91 | 4 | 5 | 387 | 10 | 389 | 0.0 | 573 |
| MS.gene71758.t1 | AT4G38970 | 72.403 | 308 | 72 | 3 | 11 | 305 | 16 | 323 | 1.96e-160 | 456 |
| MS.gene71758.t1 | AT2G21330 | 72.819 | 298 | 74 | 3 | 5 | 295 | 10 | 307 | 7.06e-158 | 446 |
| MS.gene71758.t1 | AT4G26530 | 56.250 | 352 | 149 | 4 | 40 | 387 | 8 | 358 | 1.95e-136 | 394 |
| MS.gene71758.t1 | AT4G26530 | 56.250 | 352 | 149 | 4 | 40 | 387 | 8 | 358 | 1.95e-136 | 394 |
| MS.gene71758.t1 | AT4G26530 | 56.250 | 352 | 149 | 4 | 40 | 387 | 8 | 358 | 1.95e-136 | 394 |
| MS.gene71758.t1 | AT2G36460 | 55.367 | 354 | 153 | 4 | 38 | 387 | 6 | 358 | 8.90e-135 | 390 |
| MS.gene71758.t1 | AT3G52930 | 54.520 | 354 | 156 | 4 | 38 | 387 | 6 | 358 | 9.68e-133 | 384 |
| MS.gene71758.t1 | AT5G03690 | 54.494 | 356 | 158 | 3 | 36 | 387 | 4 | 359 | 5.55e-132 | 382 |
| MS.gene71758.t1 | AT4G26520 | 54.520 | 354 | 156 | 4 | 38 | 387 | 6 | 358 | 3.41e-129 | 375 |
| MS.gene71758.t1 | AT4G26520 | 54.885 | 348 | 153 | 3 | 38 | 382 | 6 | 352 | 4.83e-129 | 375 |
| MS.gene71758.t1 | AT5G03690 | 55.301 | 349 | 152 | 3 | 43 | 387 | 45 | 393 | 6.99e-129 | 376 |
| MS.gene71758.t1 | AT4G26520 | 54.986 | 351 | 153 | 4 | 41 | 387 | 6 | 355 | 9.06e-129 | 374 |
| MS.gene71758.t1 | AT4G26520 | 54.986 | 351 | 153 | 4 | 41 | 387 | 6 | 355 | 9.06e-129 | 374 |
| MS.gene71758.t1 | AT2G36460 | 55.805 | 267 | 113 | 4 | 125 | 387 | 2 | 267 | 6.18e-99 | 295 |
| MS.gene71758.t1 | AT2G36460 | 55.805 | 267 | 113 | 4 | 125 | 387 | 2 | 267 | 6.18e-99 | 295 |
| MS.gene71758.t1 | AT5G03690 | 54.682 | 267 | 117 | 3 | 125 | 387 | 1 | 267 | 2.86e-94 | 283 |
| MS.gene71758.t1 | AT5G03690 | 54.682 | 267 | 117 | 3 | 125 | 387 | 1 | 267 | 2.86e-94 | 283 |
Find 125 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATATTTGGCAATGGTTTC+TGG | 0.143267 | 1.1:+77893255 | None:intergenic |
| AAGCATGGTTAGTGTATATT+TGG | 0.209752 | 1.1:+77893242 | None:intergenic |
| CTTGACGAACATTTCCTTCT+TGG | 0.217385 | 1.1:+77892449 | None:intergenic |
| GGCTGTTAAGGAAGCGGCCT+GGG | 0.275057 | 1.1:-77894002 | MS.gene71758:CDS |
| ACTTCCAGTGTCCTTTCAAT+TGG | 0.291399 | 1.1:+77893399 | None:intergenic |
| TCCCCATCAAGAAGAATTTC+AGG | 0.298792 | 1.1:+77893426 | None:intergenic |
| TGAGCTGCTTCAACATTCTC+AGG | 0.308014 | 1.1:+77892552 | None:intergenic |
| AGGTTAATCGCCAGGCTTAC+AGG | 0.321017 | 1.1:-77894783 | MS.gene71758:CDS |
| AGAATTTCAGGCTCAACTAT+TGG | 0.323620 | 1.1:+77893438 | None:intergenic |
| TCCTTCTGCCTTGGCTGTTA+AGG | 0.340996 | 1.1:-77894014 | MS.gene71758:CDS |
| CGTGCCATGGGTTGGGACTT+TGG | 0.343951 | 1.1:+77892634 | None:intergenic |
| CGGTAACGGTACCATGATTC+CGG | 0.350799 | 1.1:+77893194 | None:intergenic |
| TAGGGTTTGGTTCCTCTACC+AGG | 0.359285 | 1.1:-77894249 | MS.gene71758:CDS |
| AGCAGCTCAAAAGTCTCTTT+TGG | 0.359867 | 1.1:-77892538 | MS.gene71758:CDS |
| CTTCCAGTGTCCTTTCAATT+GGG | 0.368440 | 1.1:+77893400 | None:intergenic |
| GGGAAGCGTTTGGCATCAAT+TGG | 0.374360 | 1.1:-77894820 | MS.gene71758:CDS |
| TGAGCAAAATTCCCTCAAAA+AGG | 0.378619 | 1.1:+77893325 | None:intergenic |
| TCCAAGTGGTCCTTCTGCCT+TGG | 0.383226 | 1.1:-77894023 | MS.gene71758:CDS |
| CTTTCTTTGTGCTCAGCACC+AGG | 0.384320 | 1.1:+77893285 | None:intergenic |
| GAGCCTGAAATTCTTCTTGA+TGG | 0.387798 | 1.1:-77893429 | MS.gene71758:CDS |
| TCTTAAGCACGGTGTTCTGC+AGG | 0.420043 | 1.1:+77892589 | None:intergenic |
| CATCAGTTGTCGATTGGTAA+AGG | 0.422192 | 1.1:+77894695 | None:intergenic |
| ATCAGTTGTCGATTGGTAAA+GGG | 0.422744 | 1.1:+77894696 | None:intergenic |
| GTGCCAAGGTTTGGATGGAT+TGG | 0.426272 | 1.1:-77894208 | MS.gene71758:CDS |
| TGAATCTTGGTGCCAAGGTT+TGG | 0.428814 | 1.1:-77894217 | MS.gene71758:CDS |
| TGCAACCGCTGGGAAGCGTT+TGG | 0.446908 | 1.1:-77894830 | MS.gene71758:CDS |
| CTGAGCCAAGGAGTTAGCTT+TGG | 0.448199 | 1.1:+77892509 | None:intergenic |
| AGCCTGAAATTCTTCTTGAT+GGG | 0.449367 | 1.1:-77893428 | MS.gene71758:CDS |
| GTCAGGTGGACAATCAGAAA+TGG | 0.452090 | 1.1:-77892685 | MS.gene71758:CDS |
| ACCTTGTCAACTTTGATGCC+AGG | 0.456026 | 1.1:+77894631 | None:intergenic |
| TGGCTGTTAAGGAAGCGGCC+TGG | 0.457338 | 1.1:-77894003 | MS.gene71758:CDS |
| ACCATGATTCCGGGGACTGC+AGG | 0.458254 | 1.1:+77893204 | None:intergenic |
| AAAGACACGTGCCATGGGTT+GGG | 0.469437 | 1.1:+77892627 | None:intergenic |
| GCGTTTGGCATCAATTGGAT+TGG | 0.476960 | 1.1:-77894815 | MS.gene71758:CDS |
| CCAGTGTCCTTTCAATTGGG+TGG | 0.480272 | 1.1:+77893403 | None:intergenic |
| GACTTCGGACCATACCTTCT+CGG | 0.480537 | 1.1:+77893374 | None:intergenic |
| CTGGTGCTGAGCACAAAGAA+AGG | 0.481067 | 1.1:-77893284 | MS.gene71758:CDS |
| AAGGGTTGTTAGCGATCCAT+TGG | 0.483515 | 1.1:+77895315 | None:intergenic |
| GCAAAAGTTGCCTGTAAGCC+TGG | 0.485518 | 1.1:+77894773 | None:intergenic |
| TTGCTCACCACACCCGGTCT+AGG | 0.485709 | 1.1:-77894754 | MS.gene71758:CDS |
| GATGAATCAAATGCAACCGC+TGG | 0.489723 | 1.1:-77894841 | MS.gene71758:CDS |
| TCCTGCAGTCCCCGGAATCA+TGG | 0.494010 | 1.1:-77893205 | MS.gene71758:intron |
| CAGGGTCAAACAATGAATCT+TGG | 0.494941 | 1.1:-77894230 | MS.gene71758:CDS |
| TGGAAGTTGCCGAGAAGGTA+TGG | 0.496479 | 1.1:-77893383 | MS.gene71758:CDS |
| TCTGTTGCATCTCGTGGTCG+TGG | 0.498134 | 1.1:-77894877 | MS.gene71758:CDS |
| TCATTGTTTGACCCTGGTAG+AGG | 0.501439 | 1.1:+77894237 | None:intergenic |
| CTTTACCAATCGACAACTGA+TGG | 0.504053 | 1.1:-77894694 | MS.gene71758:CDS |
| AACAATGAATCTTGGTGCCA+AGG | 0.506764 | 1.1:-77894222 | MS.gene71758:CDS |
| AGAGATGTATTCACCTAGAC+CGG | 0.511873 | 1.1:+77894741 | None:intergenic |
| TCTTCCCATCAGTTGTCGAT+TGG | 0.513936 | 1.1:+77894689 | None:intergenic |
| GAGACACCTCAACTTCTAGT+AGG | 0.519596 | 1.1:+77892419 | None:intergenic |
| GGTAACGGTACCATGATTCC+GGG | 0.519907 | 1.1:+77893195 | None:intergenic |
| CCACCACGGCGAGAAGAGAA+AGG | 0.520460 | 1.1:+77895296 | None:intergenic |
| GCTAACTCCTTGGCTCAGCT+TGG | 0.521549 | 1.1:-77892504 | MS.gene71758:CDS |
| ACGATATGCTGCTATCTCTC+AGG | 0.522411 | 1.1:-77893972 | MS.gene71758:intron |
| CCGTGCCAAAGCTAACTCCT+TGG | 0.523174 | 1.1:-77892514 | MS.gene71758:CDS |
| TCTTGGTGCCAAGGTTTGGA+TGG | 0.523779 | 1.1:-77894213 | MS.gene71758:CDS |
| AACTGATGGGAAGAAGTTTG+TGG | 0.525618 | 1.1:-77894680 | MS.gene71758:CDS |
| TGCCTTGGCTGTTAAGGAAG+CGG | 0.526397 | 1.1:-77894008 | MS.gene71758:CDS |
| GGTTAGTGTATATTTGGCAA+TGG | 0.529594 | 1.1:+77893248 | None:intergenic |
| CAATACTGAGGTTAATCGCC+AGG | 0.530082 | 1.1:-77894791 | MS.gene71758:CDS |
| AGCATATCGTGCAAGTCCCC+AGG | 0.533205 | 1.1:+77893985 | None:intergenic |
| CGAAAATGAAGAAGCCAAGA+AGG | 0.534786 | 1.1:-77892463 | MS.gene71758:CDS |
| GAGCTGCTTCAACATTCTCA+GGG | 0.535757 | 1.1:+77892553 | None:intergenic |
| AGGGTTGTTAGCGATCCATT+GGG | 0.536120 | 1.1:+77895316 | None:intergenic |
| TGGTGCTGAGCACAAAGAAA+GGG | 0.536459 | 1.1:-77893283 | MS.gene71758:CDS |
| GCACCAGGTGTAACCATGCT+AGG | 0.538660 | 1.1:+77893300 | None:intergenic |
| GAAAGACACGTGCCATGGGT+TGG | 0.541533 | 1.1:+77892626 | None:intergenic |
| GGTCTAGGTGAATACATCTC+TGG | 0.541967 | 1.1:-77894739 | MS.gene71758:CDS |
| GCCTGAAATTCTTCTTGATG+GGG | 0.544178 | 1.1:-77893427 | MS.gene71758:CDS |
| GCCAAGGCAGAAGGACCACT+TGG | 0.544206 | 1.1:+77894022 | None:intergenic |
| AGAGTTCCTCCTGCAGTCCC+CGG | 0.546179 | 1.1:-77893213 | MS.gene71758:CDS |
| GACACTGGAAGTTGCCGAGA+AGG | 0.547027 | 1.1:-77893388 | MS.gene71758:CDS |
| GGCCGCTTCCTTAACAGCCA+AGG | 0.548119 | 1.1:+77894006 | None:intergenic |
| CGTGAGGAGAACATTGTACC+TGG | 0.549941 | 1.1:-77894649 | MS.gene71758:CDS |
| CCTTTCTCTTCTCGCCGTGG+TGG | 0.550506 | 1.1:-77895296 | MS.gene71758:CDS |
| ATGGGGACCACCCAATTGAA+AGG | 0.554643 | 1.1:-77893410 | MS.gene71758:CDS |
| AAGAGAGACGTTGCGAGTGG+AGG | 0.555621 | 1.1:+77895268 | None:intergenic |
| AGGGTTTGGTTCCTCTACCA+GGG | 0.568089 | 1.1:-77894248 | MS.gene71758:CDS |
| GTATTCACCTAGACCGGGTG+TGG | 0.569507 | 1.1:+77894747 | None:intergenic |
| GTATCTTCCAAGCTGAGCCA+AGG | 0.572003 | 1.1:+77892497 | None:intergenic |
| AGCGGTTTGAACAAGTTCAT+CGG | 0.573532 | 1.1:+77895226 | None:intergenic |
| TCCTTAACAGCCAAGGCAGA+AGG | 0.573737 | 1.1:+77894013 | None:intergenic |
| TCGGAGTAAGAAGCGCGGAT+CGG | 0.575235 | 1.1:+77895245 | None:intergenic |
| TCAACTCTCTCTCTTCCCAA+TGG | 0.579450 | 1.1:-77895331 | MS.gene71758:CDS |
| TGTGTTCCATTGCAGGACAA+CGG | 0.583080 | 1.1:-77893468 | MS.gene71758:intron |
| TATGAGAAAGACACGTGCCA+TGG | 0.584679 | 1.1:+77892621 | None:intergenic |
| AGGAACTCTTCTGTTAAGCA+TGG | 0.585388 | 1.1:+77893227 | None:intergenic |
| ATGAGAAAGACACGTGCCAT+GGG | 0.586561 | 1.1:+77892622 | None:intergenic |
| TAGAAATCTGTTGCATCTCG+TGG | 0.588123 | 1.1:-77894883 | MS.gene71758:CDS |
| CAGGCTCAACTATTGGAACA+AGG | 0.589394 | 1.1:+77893445 | None:intergenic |
| CACCACGGCGAGAAGAGAAA+GGG | 0.589844 | 1.1:+77895297 | None:intergenic |
| CAAGATTCATTGTTTGACCC+TGG | 0.591933 | 1.1:+77894231 | None:intergenic |
| AAGCCAATCCATCCAAACCT+TGG | 0.594762 | 1.1:+77894205 | None:intergenic |
| ATGAATCAAATGCAACCGCT+GGG | 0.595807 | 1.1:-77894840 | MS.gene71758:CDS |
| CTTAAGCACGGTGTTCTGCA+GGG | 0.596190 | 1.1:+77892590 | None:intergenic |
| AACCCTTTCTCTTCTCGCCG+TGG | 0.600461 | 1.1:-77895299 | MS.gene71758:CDS |
| GCTGTTAAGGAAGCGGCCTG+GGG | 0.602168 | 1.1:-77894001 | MS.gene71758:CDS |
| AAGCCTAGCATGGTTACACC+TGG | 0.607681 | 1.1:-77893303 | MS.gene71758:CDS |
| CCAAGGAGTTAGCTTTGGCA+CGG | 0.608922 | 1.1:+77892514 | None:intergenic |
| ACCGTGCTTAAGACATGGCA+AGG | 0.609667 | 1.1:-77892579 | MS.gene71758:CDS |
| ACCTTGCCATGTCTTAAGCA+CGG | 0.614625 | 1.1:+77892578 | None:intergenic |
| CGGAAGAGAGACGTTGCGAG+TGG | 0.615100 | 1.1:+77895265 | None:intergenic |
| TTTACCAATCGACAACTGAT+GGG | 0.617461 | 1.1:-77894693 | MS.gene71758:CDS |
| CCACCCAATTGAAAGGACAC+TGG | 0.623497 | 1.1:-77893403 | MS.gene71758:CDS |
| CAGGTACAATGTTCTCCTCA+CGG | 0.624895 | 1.1:+77894650 | None:intergenic |
| CTTGGAAGATACTCTGCCGA+GGG | 0.626594 | 1.1:-77892486 | MS.gene71758:CDS |
| CAAGAAGGAAATGTTCGTCA+AGG | 0.630500 | 1.1:-77892448 | MS.gene71758:CDS |
| ATGATTCCGGGGACTGCAGG+AGG | 0.636274 | 1.1:+77893207 | None:intergenic |
| GCTTGGAAGATACTCTGCCG+AGG | 0.639009 | 1.1:-77892487 | MS.gene71758:CDS |
| TGAACCAAAGTCCCAACCCA+TGG | 0.639076 | 1.1:-77892638 | MS.gene71758:CDS |
| GGCCAAATAAAAGAAGACTT+CGG | 0.642870 | 1.1:+77893359 | None:intergenic |
| ACCTGGCATCAAAGTTGACA+AGG | 0.646079 | 1.1:-77894632 | MS.gene71758:intron |
| TCTGCTGAATACTACAAGCA+AGG | 0.650843 | 1.1:-77894177 | MS.gene71758:CDS |
| ACCGTTGTCAGCATTCCAAG+TGG | 0.664978 | 1.1:-77894037 | MS.gene71758:CDS |
| AATTGGATTGGACAATACTG+AGG | 0.667179 | 1.1:-77894803 | MS.gene71758:CDS |
| ACCACTTGGAATGCTGACAA+CGG | 0.673812 | 1.1:+77894036 | None:intergenic |
| GAGATGTATTCACCTAGACC+GGG | 0.674915 | 1.1:+77894742 | None:intergenic |
| AAGGTGCTCGATTTGCCAAG+TGG | 0.677907 | 1.1:-77894158 | MS.gene71758:intron |
| AGAACACCGTGCTTAAGACA+TGG | 0.678756 | 1.1:-77892584 | MS.gene71758:CDS |
| GTAACGGTACCATGATTCCG+GGG | 0.691074 | 1.1:+77893196 | None:intergenic |
| GTTTGTGGATTGTCTCCGTG+AGG | 0.692026 | 1.1:-77894665 | MS.gene71758:CDS |
| TGATGCCAAACGCTTCCCAG+CGG | 0.710626 | 1.1:+77894825 | None:intergenic |
| GTTCATCGGAGTAAGAAGCG+CGG | 0.758027 | 1.1:+77895240 | None:intergenic |
| GAGTGGAGGAAGATCCACCA+CGG | 0.775671 | 1.1:+77895282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAAAAGTAATGAAAAA+GGG | + | chr1.1:77892629-77892648 | None:intergenic | 10.0% |
| !! | GAATTTAAAAGTAATGAAAA+AGG | + | chr1.1:77892630-77892649 | None:intergenic | 15.0% |
| !!! | TTCTTATATTGATCTTTTTT+TGG | - | chr1.1:77894282-77894301 | MS.gene71758:intron | 15.0% |
| !! | ACATTGAAATTGAATTGAAA+TGG | - | chr1.1:77893694-77893713 | MS.gene71758:intron | 20.0% |
| !! | TTATGTAAATCAGAAACTAA+AGG | + | chr1.1:77894620-77894639 | None:intergenic | 20.0% |
| !!! | AAAGTTTTAATCTTTTCTGT+TGG | - | chr1.1:77892657-77892676 | MS.gene71758:CDS | 20.0% |
| !!! | AAGTTTTAATCTTTTCTGTT+GGG | - | chr1.1:77892658-77892677 | MS.gene71758:CDS | 20.0% |
| !!! | ATATGTAATGAACCTTTTAT+TGG | - | chr1.1:77894057-77894076 | MS.gene71758:intron | 20.0% |
| !!! | TTCCAATTAGAATGTTTTAT+CGG | + | chr1.1:77892775-77892794 | None:intergenic | 20.0% |
| !!! | TTTATCCTTTTTTCTTTGTA+GGG | - | chr1.1:77893514-77893533 | MS.gene71758:intron | 20.0% |
| !!! | TTTTATCCTTTTTTCTTTGT+AGG | - | chr1.1:77893513-77893532 | MS.gene71758:intron | 20.0% |
| ! | AAAGATCAATATAAGAACAC+TGG | + | chr1.1:77894279-77894298 | None:intergenic | 25.0% |
| ! | ACGTATAGTTAACTTTGATA+TGG | + | chr1.1:77894695-77894714 | None:intergenic | 25.0% |
| ! | CATCATTAGATTAATCTGAT+TGG | - | chr1.1:77894176-77894195 | MS.gene71758:CDS | 25.0% |
| ! | GAAATAAAGAGAATAGAGAA+AGG | + | chr1.1:77892588-77892607 | None:intergenic | 25.0% |
| ! | TATAGGTTGTGAAATTTGAT+TGG | - | chr1.1:77894014-77894033 | MS.gene71758:CDS | 25.0% |
| ! | TGTCACATATGTATATATCA+AGG | + | chr1.1:77894822-77894841 | None:intergenic | 25.0% |
| ! | TGTTTAAAGATTCTGAATTC+AGG | + | chr1.1:77894888-77894907 | None:intergenic | 25.0% |
| ! | TTCCGATAAAACATTCTAAT+TGG | - | chr1.1:77892770-77892789 | MS.gene71758:intron | 25.0% |
| ! | TTGAAATTGAATTGAAATGG+TGG | - | chr1.1:77893697-77893716 | MS.gene71758:intron | 25.0% |
| ! | TTTAGTATTTATTGCAAGCA+AGG | - | chr1.1:77894117-77894136 | MS.gene71758:intron | 25.0% |
| ! | TTTCAACAAACAAACATTCA+TGG | + | chr1.1:77893847-77893866 | None:intergenic | 25.0% |
| !! | AGAATGTTTTATCGGAAAAT+TGG | + | chr1.1:77892767-77892786 | None:intergenic | 25.0% |
| !! | TGTAAGTTGAAAATGTGTAT+AGG | - | chr1.1:77893997-77894016 | MS.gene71758:CDS | 25.0% |
| AAGCATGGTTAGTGTATATT+TGG | + | chr1.1:77894542-77894561 | None:intergenic | 30.0% | |
| AATAACTGGTGTACTTTCAT+GGG | - | chr1.1:77893882-77893901 | MS.gene71758:intron | 30.0% | |
| ATTGCGTTCGTTAGTAATAT+AGG | - | chr1.1:77893179-77893198 | MS.gene71758:intron | 30.0% | |
| CAATGTGCTTAAATATCTAC+TGG | + | chr1.1:77893979-77893998 | None:intergenic | 30.0% | |
| CACAACAGAATATATGCAAT+TGG | + | chr1.1:77894920-77894939 | None:intergenic | 30.0% | |
| TAAATCAGAAACTAAAGGTG+AGG | + | chr1.1:77894615-77894634 | None:intergenic | 30.0% | |
| TAATGATGTTACAAAGCAAG+AGG | + | chr1.1:77894164-77894183 | None:intergenic | 30.0% | |
| TCGTTAGTAATATAGGATCA+AGG | - | chr1.1:77893186-77893205 | MS.gene71758:intron | 30.0% | |
| ! | GTAATGAACCTTTTATTGGT+TGG | - | chr1.1:77894061-77894080 | MS.gene71758:intron | 30.0% |
| ! | TACTTTCATGGGTTATTCTT+TGG | - | chr1.1:77893893-77893912 | MS.gene71758:intron | 30.0% |
| !! | AGTCATAACTTGTTGTGATT+TGG | - | chr1.1:77893389-77893408 | MS.gene71758:CDS | 30.0% |
| !!! | GGTTTGCTTTTGAAATATAC+AGG | - | chr1.1:77893718-77893737 | MS.gene71758:intron | 30.0% |
| AACAAACATTCATGGAATGC+AGG | + | chr1.1:77893839-77893858 | None:intergenic | 35.0% | |
| AGAATTTCAGGCTCAACTAT+TGG | + | chr1.1:77894346-77894365 | None:intergenic | 35.0% | |
| AGCCTGAAATTCTTCTTGAT+GGG | - | chr1.1:77894353-77894372 | MS.gene71758:intron | 35.0% | |
| ATAGAGAAAGGTAGTTACAG+CGG | + | chr1.1:77892576-77892595 | None:intergenic | 35.0% | |
| CCAAACCCTACAAAGAAAAA+AGG | + | chr1.1:77893522-77893541 | None:intergenic | 35.0% | |
| CTCAAAAAGGACATTGTTCT+GGG | + | chr1.1:77894446-77894465 | None:intergenic | 35.0% | |
| GAATAACTGGTGTACTTTCA+TGG | - | chr1.1:77893881-77893900 | MS.gene71758:intron | 35.0% | |
| GGCCAAATAAAAGAAGACTT+CGG | + | chr1.1:77894425-77894444 | None:intergenic | 35.0% | |
| GGTTAGTGTATATTTGGCAA+TGG | + | chr1.1:77894536-77894555 | None:intergenic | 35.0% | |
| GTATATTTGGCAATGGTTTC+TGG | + | chr1.1:77894529-77894548 | None:intergenic | 35.0% | |
| GTCAAGAACCAACCAATAAA+AGG | + | chr1.1:77894072-77894091 | None:intergenic | 35.0% | |
| GTTAACTATACGTGTGACTT+CGG | - | chr1.1:77894702-77894721 | MS.gene71758:CDS | 35.0% | |
| GTTCTTGATCGTAGGTAATT+TGG | - | chr1.1:77894939-77894958 | MS.gene71758:intron | 35.0% | |
| TGAGCAAAATTCCCTCAAAA+AGG | + | chr1.1:77894459-77894478 | None:intergenic | 35.0% | |
| TGTGACTTCGGAAATAACTA+CGG | - | chr1.1:77894714-77894733 | MS.gene71758:CDS | 35.0% | |
| TTGATCGTAGGTAATTTGGA+TGG | - | chr1.1:77894943-77894962 | MS.gene71758:intron | 35.0% | |
| TTTACCAATCGACAACTGAT+GGG | - | chr1.1:77893088-77893107 | MS.gene71758:intron | 35.0% | |
| TTTCCATAAGCTCTTCAAGA+TGG | + | chr1.1:77893352-77893371 | None:intergenic | 35.0% | |
| ! | AATTGGATTGGACAATACTG+AGG | - | chr1.1:77892978-77892997 | MS.gene71758:intron | 35.0% |
| ! | ATCAGTTGTCGATTGGTAAA+GGG | + | chr1.1:77893088-77893107 | None:intergenic | 35.0% |
| ! | CAGAACAATGTCCTTTTTGA+GGG | - | chr1.1:77894445-77894464 | MS.gene71758:intron | 35.0% |
| ! | GTCCGAAGTCTTCTTTTATT+TGG | - | chr1.1:77894420-77894439 | MS.gene71758:intron | 35.0% |
| ! | GTTTGTTGAAATAAGCTCGT+CGG | - | chr1.1:77893856-77893875 | MS.gene71758:intron | 35.0% |
| ! | TATTCTCAGTTTTTGTCAGG+TGG | - | chr1.1:77895082-77895101 | MS.gene71758:intron | 35.0% |
| ! | TCGTATTCTCAGTTTTTGTC+AGG | - | chr1.1:77895079-77895098 | MS.gene71758:intron | 35.0% |
| !! | CATTTGCTGTGTGTTTAGTT+TGG | - | chr1.1:77893940-77893959 | MS.gene71758:intron | 35.0% |
| !!! | CCTTTTTTCTTTGTAGGGTT+TGG | - | chr1.1:77893519-77893538 | MS.gene71758:intron | 35.0% |
| AACTGATGGGAAGAAGTTTG+TGG | - | chr1.1:77893101-77893120 | MS.gene71758:intron | 40.0% | |
| AAGCCATCTTGAAGAGCTTA+TGG | - | chr1.1:77893346-77893365 | MS.gene71758:CDS | 40.0% | |
| ACCAAGAATAGCTTACCACT+TGG | + | chr1.1:77893641-77893660 | None:intergenic | 40.0% | |
| ACTTCCAGTGTCCTTTCAAT+TGG | + | chr1.1:77894385-77894404 | None:intergenic | 40.0% | |
| AGAGATGTATTCACCTAGAC+CGG | + | chr1.1:77893043-77893062 | None:intergenic | 40.0% | |
| AGCGGTTTGAACAAGTTCAT+CGG | + | chr1.1:77892558-77892577 | None:intergenic | 40.0% | |
| AGGAACTCTTCTGTTAAGCA+TGG | + | chr1.1:77894557-77894576 | None:intergenic | 40.0% | |
| ATGAATCAAATGCAACCGCT+GGG | - | chr1.1:77892941-77892960 | MS.gene71758:intron | 40.0% | |
| CAAGAAGGAAATGTTCGTCA+AGG | - | chr1.1:77895333-77895352 | MS.gene71758:CDS | 40.0% | |
| CAAGATTCATTGTTTGACCC+TGG | + | chr1.1:77893553-77893572 | None:intergenic | 40.0% | |
| CAGGGTCAAACAATGAATCT+TGG | - | chr1.1:77893551-77893570 | MS.gene71758:intron | 40.0% | |
| CCTCAAAAAGGACATTGTTC+TGG | + | chr1.1:77894447-77894466 | None:intergenic | 40.0% | |
| CGAAAATGAAGAAGCCAAGA+AGG | - | chr1.1:77895318-77895337 | MS.gene71758:CDS | 40.0% | |
| CTTCCAGTGTCCTTTCAATT+GGG | + | chr1.1:77894384-77894403 | None:intergenic | 40.0% | |
| CTTGACGAACATTTCCTTCT+TGG | + | chr1.1:77895335-77895354 | None:intergenic | 40.0% | |
| CTTTACCAATCGACAACTGA+TGG | - | chr1.1:77893087-77893106 | MS.gene71758:intron | 40.0% | |
| GAAAGAATACCCCTGTAAGA+CGG | + | chr1.1:77893921-77893940 | None:intergenic | 40.0% | |
| GAGCCTGAAATTCTTCTTGA+TGG | - | chr1.1:77894352-77894371 | MS.gene71758:intron | 40.0% | |
| GCCTGAAATTCTTCTTGATG+GGG | - | chr1.1:77894354-77894373 | MS.gene71758:intron | 40.0% | |
| GTCTTAAAGCCTGTTTGGAT+TGG | + | chr1.1:77893439-77893458 | None:intergenic | 40.0% | |
| TAGAAATCTGTTGCATCTCG+TGG | - | chr1.1:77892898-77892917 | MS.gene71758:intron | 40.0% | |
| TATAGGATCAAGGCTCTGTT+TGG | - | chr1.1:77893196-77893215 | MS.gene71758:intron | 40.0% | |
| TCACAGTCTTAAAGCCTGTT+TGG | + | chr1.1:77893444-77893463 | None:intergenic | 40.0% | |
| TCCCCATCAAGAAGAATTTC+AGG | + | chr1.1:77894358-77894377 | None:intergenic | 40.0% | |
| TCTAACAAGCCAATCCAAAC+AGG | - | chr1.1:77893427-77893446 | MS.gene71758:CDS | 40.0% | |
| TCTGCTGAATACTACAAGCA+AGG | - | chr1.1:77893604-77893623 | MS.gene71758:intron | 40.0% | |
| TCTGTTGTGTTCTTGATCGT+AGG | - | chr1.1:77894931-77894950 | MS.gene71758:intron | 40.0% | |
| ! | AATTTTGCTCAAGCCTAGCA+TGG | - | chr1.1:77894468-77894487 | MS.gene71758:intron | 40.0% |
| ! | AGCAGCTCAAAAGTCTCTTT+TGG | - | chr1.1:77895243-77895262 | MS.gene71758:CDS | 40.0% |
| ! | CATCAGTTGTCGATTGGTAA+AGG | + | chr1.1:77893089-77893108 | None:intergenic | 40.0% |
| ! | CCAGAACAATGTCCTTTTTG+AGG | - | chr1.1:77894444-77894463 | MS.gene71758:intron | 40.0% |
| ! | GTTGGTTGATCATAACTTGC+TGG | - | chr1.1:77893481-77893500 | MS.gene71758:intron | 40.0% |
| !! | AACAATGAATCTTGGTGCCA+AGG | - | chr1.1:77893559-77893578 | MS.gene71758:intron | 40.0% |
| !! | CAGGCTTTAAGACTGTGATT+TGG | - | chr1.1:77893446-77893465 | MS.gene71758:CDS | 40.0% |
| AAGCCAATCCATCCAAACCT+TGG | + | chr1.1:77893579-77893598 | None:intergenic | 45.0% | |
| AAGCTCGTCGGTAGAATAAC+TGG | - | chr1.1:77893868-77893887 | MS.gene71758:intron | 45.0% | |
| AAGGGTTGTTAGCGATCCAT+TGG | + | chr1.1:77892469-77892488 | None:intergenic | 45.0% | |
| ACCACTTGGAATGCTGACAA+CGG | + | chr1.1:77893748-77893767 | None:intergenic | 45.0% | |
| ACCTGGCATCAAAGTTGACA+AGG | - | chr1.1:77893149-77893168 | MS.gene71758:intron | 45.0% | |
| ACCTTGCCATGTCTTAAGCA+CGG | + | chr1.1:77895206-77895225 | None:intergenic | 45.0% | |
| ACCTTGTCAACTTTGATGCC+AGG | + | chr1.1:77893153-77893172 | None:intergenic | 45.0% | |
| ACGATATGCTGCTATCTCTC+AGG | - | chr1.1:77893809-77893828 | MS.gene71758:intron | 45.0% | |
| AGAACACCGTGCTTAAGACA+TGG | - | chr1.1:77895197-77895216 | MS.gene71758:intron | 45.0% | |
| AGGGTTGTTAGCGATCCATT+GGG | + | chr1.1:77892468-77892487 | None:intergenic | 45.0% | |
| ATGAGAAAGACACGTGCCAT+GGG | + | chr1.1:77895162-77895181 | None:intergenic | 45.0% | |
| ATTTGGTCTCAGTGGTTGGT+TGG | - | chr1.1:77893463-77893482 | MS.gene71758:intron | 45.0% | |
| CAATACTGAGGTTAATCGCC+AGG | - | chr1.1:77892990-77893009 | MS.gene71758:intron | 45.0% | |
| CAGAAACTAAAGGTGAGGTG+CGG | + | chr1.1:77894610-77894629 | None:intergenic | 45.0% | |
| CAGGCTCAACTATTGGAACA+AGG | + | chr1.1:77894339-77894358 | None:intergenic | 45.0% | |
| CAGGTACAATGTTCTCCTCA+CGG | + | chr1.1:77893134-77893153 | None:intergenic | 45.0% | |
| GAGATGTATTCACCTAGACC+GGG | + | chr1.1:77893042-77893061 | None:intergenic | 45.0% | |
| GAGCTGCTTCAACATTCTCA+GGG | + | chr1.1:77895231-77895250 | None:intergenic | 45.0% | |
| GATGAATCAAATGCAACCGC+TGG | - | chr1.1:77892940-77892959 | MS.gene71758:intron | 45.0% | |
| GCCAAGTGGTAAGCTATTCT+TGG | - | chr1.1:77893637-77893656 | MS.gene71758:intron | 45.0% | |
| GCGTTTGGCATCAATTGGAT+TGG | - | chr1.1:77892966-77892985 | MS.gene71758:intron | 45.0% | |
| GGTCTAGGTGAATACATCTC+TGG | - | chr1.1:77893042-77893061 | MS.gene71758:intron | 45.0% | |
| GTCAGGTGGACAATCAGAAA+TGG | - | chr1.1:77895096-77895115 | MS.gene71758:intron | 45.0% | |
| TATGAGAAAGACACGTGCCA+TGG | + | chr1.1:77895163-77895182 | None:intergenic | 45.0% | |
| TCAACTCTCTCTCTTCCCAA+TGG | - | chr1.1:77892450-77892469 | MS.gene71758:CDS | 45.0% | |
| TCATTGTTTGACCCTGGTAG+AGG | + | chr1.1:77893547-77893566 | None:intergenic | 45.0% | |
| TCTTCCCATCAGTTGTCGAT+TGG | + | chr1.1:77893095-77893114 | None:intergenic | 45.0% | |
| TGAGCTGCTTCAACATTCTC+AGG | + | chr1.1:77895232-77895251 | None:intergenic | 45.0% | |
| TGCTCTTTGTGTTCCATTGC+AGG | - | chr1.1:77894306-77894325 | MS.gene71758:intron | 45.0% | |
| TGTGTTCCATTGCAGGACAA+CGG | - | chr1.1:77894313-77894332 | MS.gene71758:intron | 45.0% | |
| ! | TGGTGCTGAGCACAAAGAAA+GGG | - | chr1.1:77894498-77894517 | MS.gene71758:intron | 45.0% |
| !! | AGACTGTGATTTGGTCTCAG+TGG | - | chr1.1:77893455-77893474 | MS.gene71758:CDS | 45.0% |
| !! | ATTCTTTGGTGCCGTCTTAC+AGG | - | chr1.1:77893907-77893926 | MS.gene71758:intron | 45.0% |
| !! | TGAATCTTGGTGCCAAGGTT+TGG | - | chr1.1:77893564-77893583 | MS.gene71758:intron | 45.0% |
| !! | TGTGATTTGGTCTCAGTGGT+TGG | - | chr1.1:77893459-77893478 | MS.gene71758:intron | 45.0% |
| !! | TTCTTTGGTGCCGTCTTACA+GGG | - | chr1.1:77893908-77893927 | MS.gene71758:intron | 45.0% |
| AAAGACACGTGCCATGGGTT+GGG | + | chr1.1:77895157-77895176 | None:intergenic | 50.0% | |
| AAGCCTAGCATGGTTACACC+TGG | - | chr1.1:77894478-77894497 | MS.gene71758:intron | 50.0% | |
| ACCGTGCTTAAGACATGGCA+AGG | - | chr1.1:77895202-77895221 | MS.gene71758:intron | 50.0% | |
| ACCGTTGTCAGCATTCCAAG+TGG | - | chr1.1:77893744-77893763 | MS.gene71758:intron | 50.0% | |
| AGGTTAATCGCCAGGCTTAC+AGG | - | chr1.1:77892998-77893017 | MS.gene71758:intron | 50.0% | |
| ATGGGGACCACCCAATTGAA+AGG | - | chr1.1:77894371-77894390 | MS.gene71758:intron | 50.0% | |
| CCACCCAATTGAAAGGACAC+TGG | - | chr1.1:77894378-77894397 | MS.gene71758:intron | 50.0% | |
| CCAGTGTCCTTTCAATTGGG+TGG | + | chr1.1:77894381-77894400 | None:intergenic | 50.0% | |
| CGTGAGGAGAACATTGTACC+TGG | - | chr1.1:77893132-77893151 | MS.gene71758:intron | 50.0% | |
| CTAAAGGTGAGGTGCGGTAA+CGG | + | chr1.1:77894604-77894623 | None:intergenic | 50.0% | |
| CTTAAGCACGGTGTTCTGCA+GGG | + | chr1.1:77895194-77895213 | None:intergenic | 50.0% | |
| CTTGGAAGATACTCTGCCGA+GGG | - | chr1.1:77895295-77895314 | MS.gene71758:CDS | 50.0% | |
| CTTTCTTTGTGCTCAGCACC+AGG | + | chr1.1:77894499-77894518 | None:intergenic | 50.0% | |
| GACTTCGGACCATACCTTCT+CGG | + | chr1.1:77894410-77894429 | None:intergenic | 50.0% | |
| GCAAAAGTTGCCTGTAAGCC+TGG | + | chr1.1:77893011-77893030 | None:intergenic | 50.0% | |
| GTAACGGTACCATGATTCCG+GGG | + | chr1.1:77894588-77894607 | None:intergenic | 50.0% | |
| GTATCTTCCAAGCTGAGCCA+AGG | + | chr1.1:77895287-77895306 | None:intergenic | 50.0% | |
| GTGCCAAGGTTTGGATGGAT+TGG | - | chr1.1:77893573-77893592 | MS.gene71758:intron | 50.0% | |
| GTTCATCGGAGTAAGAAGCG+CGG | + | chr1.1:77892544-77892563 | None:intergenic | 50.0% | |
| TCCTTAACAGCCAAGGCAGA+AGG | + | chr1.1:77893771-77893790 | None:intergenic | 50.0% | |
| TCCTTCTGCCTTGGCTGTTA+AGG | - | chr1.1:77893767-77893786 | MS.gene71758:intron | 50.0% | |
| TCTTAAGCACGGTGTTCTGC+AGG | + | chr1.1:77895195-77895214 | None:intergenic | 50.0% | |
| TGAACCAAAGTCCCAACCCA+TGG | - | chr1.1:77895143-77895162 | MS.gene71758:intron | 50.0% | |
| TGCCTTGGCTGTTAAGGAAG+CGG | - | chr1.1:77893773-77893792 | MS.gene71758:intron | 50.0% | |
| TGGAAGTTGCCGAGAAGGTA+TGG | - | chr1.1:77894398-77894417 | MS.gene71758:intron | 50.0% | |
| ! | AAGGTGCTCGATTTGCCAAG+TGG | - | chr1.1:77893623-77893642 | MS.gene71758:intron | 50.0% |
| ! | AGGGTTTGGTTCCTCTACCA+GGG | - | chr1.1:77893533-77893552 | MS.gene71758:intron | 50.0% |
| ! | CAACTTTTGCTCACCACACC+CGG | - | chr1.1:77893021-77893040 | MS.gene71758:intron | 50.0% |
| ! | CGGTAACGGTACCATGATTC+CGG | + | chr1.1:77894590-77894609 | None:intergenic | 50.0% |
| ! | CTGAGCCAAGGAGTTAGCTT+TGG | + | chr1.1:77895275-77895294 | None:intergenic | 50.0% |
| ! | CTGGTGCTGAGCACAAAGAA+AGG | - | chr1.1:77894497-77894516 | MS.gene71758:intron | 50.0% |
| ! | GGCTTCTTCATTTTCGCCCT+CGG | + | chr1.1:77895314-77895333 | None:intergenic | 50.0% |
| ! | GGTAACGGTACCATGATTCC+GGG | + | chr1.1:77894589-77894608 | None:intergenic | 50.0% |
| ! | GTTTGTGGATTGTCTCCGTG+AGG | - | chr1.1:77893116-77893135 | MS.gene71758:intron | 50.0% |
| ! | TAGGGTTTGGTTCCTCTACC+AGG | - | chr1.1:77893532-77893551 | MS.gene71758:intron | 50.0% |
| !! | CCAAGGAGTTAGCTTTGGCA+CGG | + | chr1.1:77895270-77895289 | None:intergenic | 50.0% |
| !! | GGGAAGCGTTTGGCATCAAT+TGG | - | chr1.1:77892961-77892980 | MS.gene71758:intron | 50.0% |
| !! | TCTTGGTGCCAAGGTTTGGA+TGG | - | chr1.1:77893568-77893587 | MS.gene71758:intron | 50.0% |
| !! | TCTTTGGTGCCGTCTTACAG+GGG | - | chr1.1:77893909-77893928 | MS.gene71758:intron | 50.0% |
| AACCCTTTCTCTTCTCGCCG+TGG | - | chr1.1:77892482-77892501 | MS.gene71758:CDS | 55.0% | |
| AAGAGAGACGTTGCGAGTGG+AGG | + | chr1.1:77892516-77892535 | None:intergenic | 55.0% | |
| ACAAGGCCGTTGTCCTGCAA+TGG | + | chr1.1:77894322-77894341 | None:intergenic | 55.0% | |
| AGCATATCGTGCAAGTCCCC+AGG | + | chr1.1:77893799-77893818 | None:intergenic | 55.0% | |
| CACCACGGCGAGAAGAGAAA+GGG | + | chr1.1:77892487-77892506 | None:intergenic | 55.0% | |
| CCGTGCCAAAGCTAACTCCT+TGG | - | chr1.1:77895267-77895286 | MS.gene71758:CDS | 55.0% | |
| GAAAGACACGTGCCATGGGT+TGG | + | chr1.1:77895158-77895177 | None:intergenic | 55.0% | |
| GACACTGGAAGTTGCCGAGA+AGG | - | chr1.1:77894393-77894412 | MS.gene71758:intron | 55.0% | |
| GAGTGGAGGAAGATCCACCA+CGG | + | chr1.1:77892502-77892521 | None:intergenic | 55.0% | |
| GCACCAGGTGTAACCATGCT+AGG | + | chr1.1:77894484-77894503 | None:intergenic | 55.0% | |
| GCTAACTCCTTGGCTCAGCT+TGG | - | chr1.1:77895277-77895296 | MS.gene71758:CDS | 55.0% | |
| GCTTGGAAGATACTCTGCCG+AGG | - | chr1.1:77895294-77895313 | MS.gene71758:CDS | 55.0% | |
| GTATTCACCTAGACCGGGTG+TGG | + | chr1.1:77893037-77893056 | None:intergenic | 55.0% | |
| TCCAAGTGGTCCTTCTGCCT+TGG | - | chr1.1:77893758-77893777 | MS.gene71758:intron | 55.0% | |
| TCTGTTGCATCTCGTGGTCG+TGG | - | chr1.1:77892904-77892923 | MS.gene71758:intron | 55.0% | |
| TGATGCCAAACGCTTCCCAG+CGG | + | chr1.1:77892959-77892978 | None:intergenic | 55.0% | |
| ! | TCGGAGTAAGAAGCGCGGAT+CGG | + | chr1.1:77892539-77892558 | None:intergenic | 55.0% |
| ACCATGATTCCGGGGACTGC+AGG | + | chr1.1:77894580-77894599 | None:intergenic | 60.0% | |
| AGAGTTCCTCCTGCAGTCCC+CGG | - | chr1.1:77894568-77894587 | MS.gene71758:intron | 60.0% | |
| ATGATTCCGGGGACTGCAGG+AGG | + | chr1.1:77894577-77894596 | None:intergenic | 60.0% | |
| CCACCACGGCGAGAAGAGAA+AGG | + | chr1.1:77892488-77892507 | None:intergenic | 60.0% | |
| CCTTTCTCTTCTCGCCGTGG+TGG | - | chr1.1:77892485-77892504 | MS.gene71758:CDS | 60.0% | |
| CGGAAGAGAGACGTTGCGAG+TGG | + | chr1.1:77892519-77892538 | None:intergenic | 60.0% | |
| GCCAAGGCAGAAGGACCACT+TGG | + | chr1.1:77893762-77893781 | None:intergenic | 60.0% | |
| GCTGTTAAGGAAGCGGCCTG+GGG | - | chr1.1:77893780-77893799 | MS.gene71758:intron | 60.0% | |
| GGCCGCTTCCTTAACAGCCA+AGG | + | chr1.1:77893778-77893797 | None:intergenic | 60.0% | |
| GGCTGTTAAGGAAGCGGCCT+GGG | - | chr1.1:77893779-77893798 | MS.gene71758:intron | 60.0% | |
| TCCTGCAGTCCCCGGAATCA+TGG | - | chr1.1:77894576-77894595 | MS.gene71758:intron | 60.0% | |
| TGGCTGTTAAGGAAGCGGCC+TGG | - | chr1.1:77893778-77893797 | MS.gene71758:intron | 60.0% | |
| TTGCTCACCACACCCGGTCT+AGG | - | chr1.1:77893027-77893046 | MS.gene71758:intron | 60.0% | |
| !! | CGTGCCATGGGTTGGGACTT+TGG | + | chr1.1:77895150-77895169 | None:intergenic | 60.0% |
| !! | TGCAACCGCTGGGAAGCGTT+TGG | - | chr1.1:77892951-77892970 | MS.gene71758:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 77892434 | 77895369 | 77892434 | ID=MS.gene71758 |
| chr1.1 | mRNA | 77892434 | 77895369 | 77892434 | ID=MS.gene71758.t1;Parent=MS.gene71758 |
| chr1.1 | exon | 77895226 | 77895369 | 77895226 | ID=MS.gene71758.t1.exon1;Parent=MS.gene71758.t1 |
| chr1.1 | CDS | 77895226 | 77895369 | 77895226 | ID=cds.MS.gene71758.t1;Parent=MS.gene71758.t1 |
| chr1.1 | exon | 77894633 | 77894902 | 77894633 | ID=MS.gene71758.t1.exon2;Parent=MS.gene71758.t1 |
| chr1.1 | CDS | 77894633 | 77894902 | 77894633 | ID=cds.MS.gene71758.t1;Parent=MS.gene71758.t1 |
| chr1.1 | exon | 77894159 | 77894268 | 77894159 | ID=MS.gene71758.t1.exon3;Parent=MS.gene71758.t1 |
| chr1.1 | CDS | 77894159 | 77894268 | 77894159 | ID=cds.MS.gene71758.t1;Parent=MS.gene71758.t1 |
| chr1.1 | exon | 77893973 | 77894063 | 77893973 | ID=MS.gene71758.t1.exon4;Parent=MS.gene71758.t1 |
| chr1.1 | CDS | 77893973 | 77894063 | 77893973 | ID=cds.MS.gene71758.t1;Parent=MS.gene71758.t1 |
| chr1.1 | exon | 77893206 | 77893475 | 77893206 | ID=MS.gene71758.t1.exon5;Parent=MS.gene71758.t1 |
| chr1.1 | CDS | 77893206 | 77893475 | 77893206 | ID=cds.MS.gene71758.t1;Parent=MS.gene71758.t1 |
| chr1.1 | exon | 77892434 | 77892712 | 77892434 | ID=MS.gene71758.t1.exon6;Parent=MS.gene71758.t1 |
| chr1.1 | CDS | 77892434 | 77892712 | 77892434 | ID=cds.MS.gene71758.t1;Parent=MS.gene71758.t1 |
| Gene Sequence |
| Protein sequence |
