Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003647.t1 | XP_003607065.1 | 99 | 400 | 4 | 0 | 1 | 400 | 1 | 400 | 1.00E-222 | 782.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003647.t1 | Q01516 | 95.5 | 356 | 16 | 0 | 45 | 400 | 1 | 356 | 5.1e-194 | 678.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003647.t1 | G7JJV9 | 99.0 | 400 | 4 | 0 | 1 | 400 | 1 | 400 | 7.6e-223 | 782.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71758 | MS.gene003647 | PPI |
| MS.gene38250 | MS.gene003647 | PPI |
| MS.gene003647 | MS.gene50712 | PPI |
| MS.gene003647 | MS.gene50709 | PPI |
| MS.gene81275 | MS.gene003647 | PPI |
| MS.gene003647 | MS.gene020548 | PPI |
| MS.gene003647 | MS.gene007292 | PPI |
| MS.gene003647 | MS.gene029489 | PPI |
| MS.gene003647 | MS.gene062923 | PPI |
| MS.gene003647 | MS.gene24641 | PPI |
| MS.gene003645 | MS.gene003647 | PPI |
| MS.gene23350 | MS.gene003647 | PPI |
| MS.gene007290 | MS.gene003647 | PPI |
| MS.gene24640 | MS.gene003647 | PPI |
| MS.gene75189 | MS.gene003647 | PPI |
| MS.gene003647 | MS.gene23352 | PPI |
| MS.gene034926 | MS.gene003647 | PPI |
| MS.gene003647 | MS.gene020842 | PPI |
| MS.gene020547 | MS.gene003647 | PPI |
| MS.gene003647 | MS.gene37999 | PPI |
| MS.gene73439 | MS.gene003647 | PPI |
| MS.gene062925 | MS.gene003647 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003647.t1 | MTR_4g071860 | 99.000 | 400 | 4 | 0 | 1 | 400 | 1 | 400 | 0.0 | 812 |
| MS.gene003647.t1 | MTR_4g057670 | 98.750 | 400 | 5 | 0 | 1 | 400 | 1 | 400 | 0.0 | 812 |
| MS.gene003647.t1 | MTR_4g071880 | 88.750 | 400 | 31 | 4 | 1 | 400 | 1 | 386 | 0.0 | 700 |
| MS.gene003647.t1 | MTR_1g109200 | 82.535 | 355 | 61 | 1 | 46 | 400 | 38 | 391 | 0.0 | 612 |
| MS.gene003647.t1 | MTR_5g069055 | 56.818 | 352 | 147 | 4 | 53 | 400 | 8 | 358 | 2.83e-135 | 391 |
| MS.gene003647.t1 | MTR_5g096670 | 56.374 | 353 | 150 | 3 | 51 | 400 | 6 | 357 | 3.07e-133 | 386 |
| MS.gene003647.t1 | MTR_1g061050 | 54.830 | 352 | 154 | 4 | 53 | 400 | 8 | 358 | 7.67e-129 | 375 |
| MS.gene003647.t1 | MTR_5g069050 | 53.611 | 360 | 147 | 5 | 45 | 400 | 41 | 384 | 1.73e-124 | 365 |
| MS.gene003647.t1 | MTR_7g103920 | 46.809 | 94 | 26 | 1 | 157 | 250 | 11 | 80 | 2.97e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003647.t1 | AT2G21330 | 83.333 | 402 | 62 | 4 | 1 | 400 | 1 | 399 | 0.0 | 688 |
| MS.gene003647.t1 | AT4G38970 | 83.709 | 399 | 61 | 3 | 4 | 400 | 2 | 398 | 0.0 | 681 |
| MS.gene003647.t1 | AT2G21330 | 80.846 | 402 | 62 | 5 | 1 | 400 | 1 | 389 | 0.0 | 659 |
| MS.gene003647.t1 | AT2G01140 | 75.063 | 397 | 92 | 2 | 4 | 400 | 2 | 391 | 0.0 | 611 |
| MS.gene003647.t1 | AT2G21330 | 82.903 | 310 | 48 | 4 | 1 | 308 | 1 | 307 | 0.0 | 523 |
| MS.gene003647.t1 | AT4G38970 | 79.630 | 324 | 55 | 4 | 4 | 318 | 2 | 323 | 0.0 | 518 |
| MS.gene003647.t1 | AT4G26530 | 56.780 | 354 | 148 | 4 | 51 | 400 | 6 | 358 | 2.00e-136 | 394 |
| MS.gene003647.t1 | AT4G26530 | 56.780 | 354 | 148 | 4 | 51 | 400 | 6 | 358 | 2.00e-136 | 394 |
| MS.gene003647.t1 | AT4G26530 | 56.780 | 354 | 148 | 4 | 51 | 400 | 6 | 358 | 2.00e-136 | 394 |
| MS.gene003647.t1 | AT2G36460 | 56.818 | 352 | 147 | 4 | 53 | 400 | 8 | 358 | 6.35e-135 | 390 |
| MS.gene003647.t1 | AT3G52930 | 55.682 | 352 | 151 | 4 | 53 | 400 | 8 | 358 | 4.70e-132 | 383 |
| MS.gene003647.t1 | AT5G03690 | 55.398 | 352 | 153 | 3 | 53 | 400 | 8 | 359 | 2.35e-129 | 376 |
| MS.gene003647.t1 | AT5G03690 | 51.000 | 400 | 182 | 5 | 7 | 400 | 2 | 393 | 1.00e-128 | 376 |
| MS.gene003647.t1 | AT4G26520 | 55.398 | 352 | 152 | 4 | 53 | 400 | 8 | 358 | 7.16e-127 | 370 |
| MS.gene003647.t1 | AT4G26520 | 55.556 | 351 | 151 | 4 | 53 | 399 | 8 | 357 | 1.42e-126 | 369 |
| MS.gene003647.t1 | AT4G26520 | 55.271 | 351 | 152 | 4 | 54 | 400 | 6 | 355 | 3.01e-126 | 368 |
| MS.gene003647.t1 | AT4G26520 | 55.271 | 351 | 152 | 4 | 54 | 400 | 6 | 355 | 3.01e-126 | 368 |
| MS.gene003647.t1 | AT2G36460 | 56.343 | 268 | 112 | 4 | 137 | 400 | 1 | 267 | 8.94e-99 | 295 |
| MS.gene003647.t1 | AT2G36460 | 56.343 | 268 | 112 | 4 | 137 | 400 | 1 | 267 | 8.94e-99 | 295 |
| MS.gene003647.t1 | AT5G03690 | 54.307 | 267 | 118 | 3 | 138 | 400 | 1 | 267 | 1.89e-91 | 276 |
| MS.gene003647.t1 | AT5G03690 | 54.307 | 267 | 118 | 3 | 138 | 400 | 1 | 267 | 1.89e-91 | 276 |
Find 138 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACCCGGGCGTGGTATTT+TGG | 0.165856 | 4.1:-31307295 | MS.gene003647:CDS |
| ATGTCTTCAATGCGGTATTT+TGG | 0.245388 | 4.1:+31305702 | None:intergenic |
| TTTGACGAACAATTCCTTCT+TGG | 0.278555 | 4.1:+31305565 | None:intergenic |
| GGCTGTCAAGGAAGCAGCCT+GGG | 0.313883 | 4.1:-31306473 | MS.gene003647:CDS |
| GGGAAGCGTTTGGCTTCAAT+TGG | 0.326689 | 4.1:-31307246 | MS.gene003647:CDS |
| TTGAAGTAGCACAAAAGGTT+TGG | 0.329064 | 4.1:-31306111 | MS.gene003647:CDS |
| TTGTCCTTGCACTCAGCTCC+TGG | 0.340552 | 4.1:+31306013 | None:intergenic |
| CGTGCCATGGGTTTGGAGAT+TGG | 0.341879 | 4.1:+31305750 | None:intergenic |
| ACCATGATACCAGGGACAGC+TGG | 0.345678 | 4.1:+31305932 | None:intergenic |
| GCCAGAGCAGAGGGACCATT+TGG | 0.346997 | 4.1:+31306493 | None:intergenic |
| CAAGGAAGCAGCCTGGGGTT+TGG | 0.347325 | 4.1:-31306467 | MS.gene003647:CDS |
| CTCTACCAATCTACAGTTGA+TGG | 0.350484 | 4.1:-31307120 | MS.gene003647:CDS |
| AAGGTGCTCGTTTCGCTAAA+TGG | 0.352666 | 4.1:-31306643 | MS.gene003647:intron |
| AAGATCTCTGGTTCCACAAT+TGG | 0.357070 | 4.1:+31306166 | None:intergenic |
| ATCGAGCAAAACATTGTTCC+TGG | 0.364320 | 4.1:-31307075 | MS.gene003647:CDS |
| TGAGGAGAATGCCCTCAAAT+TGG | 0.371449 | 4.1:+31306053 | None:intergenic |
| CCCAAATGGTCCCTCTGCTC+TGG | 0.373420 | 4.1:-31306494 | MS.gene003647:CDS |
| TGAATCATGGTGCCAAGGTC+TGG | 0.375096 | 4.1:-31306702 | MS.gene003647:CDS |
| TGAAGTAGCACAAAAGGTTT+GGG | 0.375792 | 4.1:-31306110 | MS.gene003647:CDS |
| CTCTGGTGCCATTCTCTTTG+AGG | 0.388489 | 4.1:-31307148 | MS.gene003647:CDS |
| AACGACACGTGCCATGGGTT+TGG | 0.390092 | 4.1:+31305743 | None:intergenic |
| CCCAGCTGTCCCTGGTATCA+TGG | 0.393404 | 4.1:-31305933 | MS.gene003647:intron |
| TGGGTTTGGAGATTGGTTCA+TGG | 0.399088 | 4.1:+31305757 | None:intergenic |
| TGGCTGTCAAGGAAGCAGCC+TGG | 0.407019 | 4.1:-31306474 | MS.gene003647:CDS |
| CAATTCCTTCTTGGCTTCCT+CGG | 0.408353 | 4.1:+31305574 | None:intergenic |
| CCATGCTTGGCGGTTAGCTT+CGG | 0.415377 | 4.1:+31307212 | None:intergenic |
| TGCTACATGTGGGAAGCGTT+TGG | 0.419407 | 4.1:-31307256 | MS.gene003647:CDS |
| CTTGTGACAGTTCCATCACT+TGG | 0.443187 | 4.1:-31307180 | MS.gene003647:CDS |
| TCCTTCCATCAACTGTAGAT+TGG | 0.444723 | 4.1:+31307115 | None:intergenic |
| TAGGGTCTGGTGCCCCTAGC+TGG | 0.446675 | 4.1:-31306734 | MS.gene003647:CDS |
| GGCATAGGAACCAGCTCTAA+TGG | 0.449664 | 4.1:+31308151 | None:intergenic |
| TAGCGAAACGAGCACCTTGT+TGG | 0.451475 | 4.1:+31306648 | None:intergenic |
| AGCACAAAAGGTTTGGGCTG+AGG | 0.454604 | 4.1:-31306104 | MS.gene003647:CDS |
| TTGAGCAATTGAGTTGGACT+TGG | 0.467054 | 4.1:+31305625 | None:intergenic |
| CCAGAGCAGAGGGACCATTT+GGG | 0.467471 | 4.1:+31306494 | None:intergenic |
| TTGTTCTTGACAAGTCTGAA+TGG | 0.468236 | 4.1:-31308253 | MS.gene003647:CDS |
| GAACCAGAGATCTTGCTTGA+TGG | 0.472497 | 4.1:-31306157 | MS.gene003647:CDS |
| GTTCATGGCATTCAAGTTGA+GGG | 0.472908 | 4.1:+31305772 | None:intergenic |
| TGAGAACAATGTCCAATTTG+AGG | 0.474283 | 4.1:-31306065 | MS.gene003647:CDS |
| TCCAACTCAATTGCTCAACT+TGG | 0.475986 | 4.1:-31305620 | MS.gene003647:CDS |
| AGATCTCTGGTTCCACAATT+GGG | 0.476937 | 4.1:+31306167 | None:intergenic |
| CATGGCCAAAATACCACGCC+CGG | 0.484879 | 4.1:+31307290 | None:intergenic |
| TCCCTCTGCTCTGGCTGTCA+AGG | 0.485533 | 4.1:-31306485 | MS.gene003647:CDS |
| ACCTTGTCAACTTTGATACC+AGG | 0.493112 | 4.1:+31307057 | None:intergenic |
| TCGCTATGCTGCAATTAGTC+AGG | 0.494622 | 4.1:-31306443 | MS.gene003647:intron |
| TGCAACCCTACTGCTCCATC+AGG | 0.494718 | 4.1:-31308179 | MS.gene003647:CDS |
| CAAGAAGGGTACGCCATGCT+TGG | 0.498533 | 4.1:+31307199 | None:intergenic |
| GGAAGCGTTTGGCTTCAATT+GGG | 0.502252 | 4.1:-31307245 | MS.gene003647:CDS |
| CAGAAAACAATTGCTTCACC+CGG | 0.510404 | 4.1:-31307309 | MS.gene003647:CDS |
| ATTCATCGTTGGAACCAGCT+AGG | 0.510943 | 4.1:+31306720 | None:intergenic |
| TCACTTGGAGAGTATATCTC+TGG | 0.513608 | 4.1:-31307165 | MS.gene003647:CDS |
| TGTTCTTGACAAGTCTGAAT+GGG | 0.513891 | 4.1:-31308252 | MS.gene003647:CDS |
| GAGAACAATGTCCAATTTGA+GGG | 0.514083 | 4.1:-31306064 | MS.gene003647:CDS |
| TTCATCGTTGGAACCAGCTA+GGG | 0.515096 | 4.1:+31306721 | None:intergenic |
| GCTCTAATGGTAAGACCTGA+TGG | 0.519825 | 4.1:+31308164 | None:intergenic |
| TTCTCCTGTGAAGGAGCTTG+AGG | 0.524713 | 4.1:+31305960 | None:intergenic |
| AGGCAAGACCGTCCAGACCT+TGG | 0.525040 | 4.1:+31306690 | None:intergenic |
| CTTGACGAGCTCGTCGGCAT+AGG | 0.526984 | 4.1:+31308136 | None:intergenic |
| GGTTCATGGCATTCAAGTTG+AGG | 0.530771 | 4.1:+31305771 | None:intergenic |
| CAACGGATTGGTCCCAATTG+TGG | 0.534112 | 4.1:-31306179 | MS.gene003647:CDS |
| GTATAGTCAGCAACTGTGGC+AGG | 0.534125 | 4.1:+31305983 | None:intergenic |
| TATGAGAACGACACGTGCCA+TGG | 0.534333 | 4.1:+31305737 | None:intergenic |
| ATACCCTCAAGCTCCTTCAC+AGG | 0.534468 | 4.1:-31305964 | MS.gene003647:CDS |
| TCAGGTCTTACCATTAGAGC+TGG | 0.535329 | 4.1:-31308161 | MS.gene003647:CDS |
| GTAAGACCTGATGGAGCAGT+AGG | 0.536429 | 4.1:+31308173 | None:intergenic |
| AGCATAGCGAGCCAAACCCC+AGG | 0.539660 | 4.1:+31306456 | None:intergenic |
| TCTCCATCAAGCAAGATCTC+TGG | 0.540606 | 4.1:+31306154 | None:intergenic |
| TCTCCTGTGAAGGAGCTTGA+GGG | 0.542263 | 4.1:+31305961 | None:intergenic |
| CCATGATACCAGGGACAGCT+GGG | 0.545501 | 4.1:+31305933 | None:intergenic |
| AAAATACCGCATTGAAGACA+TGG | 0.548809 | 4.1:-31305700 | MS.gene003647:CDS |
| GAGAGTTTCCTCAAAGAGAA+TGG | 0.549338 | 4.1:+31307140 | None:intergenic |
| AAGCCTAGCATGGTTACTCC+AGG | 0.551395 | 4.1:-31306031 | MS.gene003647:CDS |
| AGAAGAAGGTTGACGTAGGA+GGG | 0.553419 | 4.1:+31308217 | None:intergenic |
| GCTCCTGGAGTAACCATGCT+AGG | 0.553694 | 4.1:+31306028 | None:intergenic |
| GAAGGGTACGCCATGCTTGG+CGG | 0.555457 | 4.1:+31307202 | None:intergenic |
| GTCAGCAACTGTGGCAGGAG+AGG | 0.555780 | 4.1:+31305988 | None:intergenic |
| TCCTTGACAGCCAGAGCAGA+GGG | 0.557055 | 4.1:+31306484 | None:intergenic |
| TCCAAGTTGAGCAATTGAGT+TGG | 0.559400 | 4.1:+31305619 | None:intergenic |
| CTGGTTCCAACGATGAATCA+TGG | 0.559760 | 4.1:-31306715 | MS.gene003647:CDS |
| TAGAAGAAGGTTGACGTAGG+AGG | 0.563073 | 4.1:+31308216 | None:intergenic |
| ACGCTTCCCACATGTAGCAT+TGG | 0.563790 | 4.1:+31307260 | None:intergenic |
| TGAATCCGAGGAAGCCAAGA+AGG | 0.564271 | 4.1:-31305579 | MS.gene003647:CDS |
| ACAATTGCTTCACCCGGGCG+TGG | 0.565967 | 4.1:-31307303 | MS.gene003647:CDS |
| ATCTTGCTTGATGGAGAACA+TGG | 0.567139 | 4.1:-31306148 | MS.gene003647:CDS |
| TACTCCAGGAGCTGAGTGCA+AGG | 0.568532 | 4.1:-31306017 | MS.gene003647:CDS |
| GTGATGGAACTGTCACAAGA+AGG | 0.571260 | 4.1:+31307184 | None:intergenic |
| AAGAAGGAATTGTTCGTCAA+AGG | 0.571329 | 4.1:-31305563 | MS.gene003647:CDS |
| CTTACAACAGACATAGAAGA+AGG | 0.572337 | 4.1:+31308203 | None:intergenic |
| GGTTTATTAGGACAACGGAT+TGG | 0.572758 | 4.1:-31306191 | MS.gene003647:intron |
| TGTAGCATTGGACTCATCCA+TGG | 0.576571 | 4.1:+31307272 | None:intergenic |
| AGGAGCTGAGTGCAAGGACA+AGG | 0.577780 | 4.1:-31306011 | MS.gene003647:CDS |
| ACAGTTGTGAGCATCCCAAA+TGG | 0.578058 | 4.1:-31306508 | MS.gene003647:CDS |
| TTTGTCTGGTGGACAATCTG+AGG | 0.579742 | 4.1:-31305804 | MS.gene003647:CDS |
| GTGTCACATACCATGATACC+AGG | 0.579988 | 4.1:+31305923 | None:intergenic |
| TGACAAGTCTGAATGGGTGA+AGG | 0.580261 | 4.1:-31308246 | MS.gene003647:CDS |
| GAGATATACTCTCCAAGTGA+TGG | 0.582405 | 4.1:+31307168 | None:intergenic |
| CCGAAGCTAACCGCCAAGCA+TGG | 0.583140 | 4.1:-31307212 | MS.gene003647:CDS |
| TTGGCACCATGATTCATCGT+TGG | 0.586333 | 4.1:+31306709 | None:intergenic |
| CACTGGTGAGGGTGAATCCG+AGG | 0.587935 | 4.1:-31305591 | MS.gene003647:CDS |
| AACGATGAATCATGGTGCCA+AGG | 0.589365 | 4.1:-31306707 | MS.gene003647:CDS |
| CATTCTCCTCAAGCCTAGCA+TGG | 0.591042 | 4.1:-31306041 | MS.gene003647:CDS |
| GACAAGTCTGAATGGGTGAA+GGG | 0.591129 | 4.1:-31308245 | MS.gene003647:CDS |
| ATGAGAACGACACGTGCCAT+GGG | 0.596886 | 4.1:+31305738 | None:intergenic |
| GCTGTCAAGGAAGCAGCCTG+GGG | 0.597669 | 4.1:-31306472 | MS.gene003647:CDS |
| TCCTGGTATCAAAGTTGACA+AGG | 0.599517 | 4.1:-31307058 | MS.gene003647:intron |
| ATTGGACATTGTTCTCAGCA+AGG | 0.604841 | 4.1:+31306071 | None:intergenic |
| ACCAATCTACAGTTGATGGA+AGG | 0.606822 | 4.1:-31307116 | MS.gene003647:CDS |
| TCATGGTGCCAAGGTCTGGA+CGG | 0.610100 | 4.1:-31306698 | MS.gene003647:CDS |
| CGCGGTCTTGACGAGCTCGT+CGG | 0.610136 | 4.1:+31308130 | None:intergenic |
| TGATGGAACTGTCACAAGAA+GGG | 0.610460 | 4.1:+31307185 | None:intergenic |
| TTAATGGTTTATTAGGACAA+CGG | 0.610985 | 4.1:-31306196 | MS.gene003647:intron |
| AGGCCGCGCAGAGAACGTAA+AGG | 0.614703 | 4.1:-31305675 | MS.gene003647:CDS |
| GAGTAACCATGCTAGGCTTG+AGG | 0.616311 | 4.1:+31306035 | None:intergenic |
| CTTGGAAAGTACACTGGTGA+GGG | 0.616339 | 4.1:-31305602 | MS.gene003647:CDS |
| CAATTGAGTTGGACTTGGCG+CGG | 0.616785 | 4.1:+31305630 | None:intergenic |
| TTCCTTGACAGCCAGAGCAG+AGG | 0.621508 | 4.1:+31306483 | None:intergenic |
| AAATACCGCATTGAAGACAT+GGG | 0.626712 | 4.1:-31305699 | MS.gene003647:CDS |
| ACTTGGAAAGTACACTGGTG+AGG | 0.631708 | 4.1:-31305603 | MS.gene003647:CDS |
| ATGGCCAAAATACCACGCCC+GGG | 0.644348 | 4.1:+31307291 | None:intergenic |
| ACCGCATTGAAGACATGGGG+AGG | 0.644971 | 4.1:-31305695 | MS.gene003647:CDS |
| TAAGACCTGATGGAGCAGTA+GGG | 0.647498 | 4.1:+31308174 | None:intergenic |
| TGAACCAATCTCCAAACCCA+TGG | 0.649676 | 4.1:-31305754 | MS.gene003647:CDS |
| GAGGGTATAGTCAGCAACTG+TGG | 0.652280 | 4.1:+31305979 | None:intergenic |
| GTAGTATGCAGCTGAACGAG+AGG | 0.655895 | 4.1:+31306670 | None:intergenic |
| GCTCAACTTGGAAAGTACAC+TGG | 0.658104 | 4.1:-31305608 | MS.gene003647:CDS |
| CATGATACCAGGGACAGCTG+GGG | 0.665632 | 4.1:+31305934 | None:intergenic |
| GATGAGTCCAATGCTACATG+TGG | 0.669307 | 4.1:-31307267 | MS.gene003647:CDS |
| ATGATACCAGGGACAGCTGG+GGG | 0.672628 | 4.1:+31305935 | None:intergenic |
| AGAAAACAATTGCTTCACCC+GGG | 0.673634 | 4.1:-31307308 | MS.gene003647:CDS |
| TCATCGTTGGAACCAGCTAG+GGG | 0.675575 | 4.1:+31306722 | None:intergenic |
| ACATAGAAGAAGGTTGACGT+AGG | 0.687898 | 4.1:+31308213 | None:intergenic |
| CTGCCTTTACGTTCTCTGCG+CGG | 0.695561 | 4.1:+31305672 | None:intergenic |
| CGACGAGCTCGTCAAGACCG+CGG | 0.701731 | 4.1:-31308129 | MS.gene003647:intron |
| GCCTCCCCATGTCTTCAATG+CGG | 0.705321 | 4.1:+31305694 | None:intergenic |
| TCAGCTGCATACTACCAACA+AGG | 0.710256 | 4.1:-31306662 | MS.gene003647:CDS |
| TGTCACATACCATGATACCA+GGG | 0.730745 | 4.1:+31305924 | None:intergenic |
| AATACCGCATTGAAGACATG+GGG | 0.731314 | 4.1:-31305698 | MS.gene003647:CDS |
| ATGAGTCCAATGCTACATGT+GGG | 0.746520 | 4.1:-31307266 | MS.gene003647:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCATAATAATATACAT+CGG | + | chr4.1:31306903-31306922 | None:intergenic | 10.0% |
| !! | AAAGAATAATGTTATGTATT+TGG | + | chr4.1:31307946-31307965 | None:intergenic | 15.0% |
| !! | AATCACTTATATAATTTGAA+TGG | + | chr4.1:31307431-31307450 | None:intergenic | 15.0% |
| !! | ATTGTTAGTATTATTATGTT+AGG | - | chr4.1:31305769-31305788 | MS.gene003647:CDS | 15.0% |
| !! | ACAAATTTCAATTGCATATT+AGG | - | chr4.1:31307306-31307325 | MS.gene003647:CDS | 20.0% |
| !! | TAATACTAACAATACTAACA+TGG | + | chr4.1:31305762-31305781 | None:intergenic | 20.0% |
| !!! | ACATTTTCTTGTACAAAAAA+TGG | - | chr4.1:31305995-31306014 | MS.gene003647:CDS | 20.0% |
| !!! | GTAAAAGTATAAGATACTTT+TGG | - | chr4.1:31306027-31306046 | MS.gene003647:CDS | 20.0% |
| !!! | TGCAATATTTTATGTTTCAT+TGG | - | chr4.1:31306466-31306485 | MS.gene003647:CDS | 20.0% |
| ! | AAACTAACATGCTAGAAATT+TGG | - | chr4.1:31305893-31305912 | MS.gene003647:intron | 25.0% |
| ! | AATTGATGAAAAGAATAAGC+AGG | - | chr4.1:31306869-31306888 | MS.gene003647:intron | 25.0% |
| ! | ATATGCAATTGAAATTTGTG+TGG | + | chr4.1:31307305-31307324 | None:intergenic | 25.0% |
| ! | GCTAAAATATGTCCATTTAA+TGG | - | chr4.1:31307628-31307647 | MS.gene003647:intron | 25.0% |
| ! | GTCAAATACAATTTGTACAT+AGG | + | chr4.1:31307555-31307574 | None:intergenic | 25.0% |
| ! | TATTTGACTAGAATGTTCTT+TGG | - | chr4.1:31307567-31307586 | MS.gene003647:intron | 25.0% |
| ! | TCCAAGATAGCTTATAAAAA+CGG | + | chr4.1:31306178-31306197 | None:intergenic | 25.0% |
| ! | TCCATATTATTGTTTATGTC+AGG | + | chr4.1:31307013-31307032 | None:intergenic | 25.0% |
| ! | TCTAATAGAGTGATATCATT+TGG | - | chr4.1:31306943-31306962 | MS.gene003647:intron | 25.0% |
| ! | TGTCCATTTAATGGTTTATT+AGG | - | chr4.1:31307637-31307656 | MS.gene003647:intron | 25.0% |
| ! | TGTCCTAATAAACCATTAAA+TGG | + | chr4.1:31307643-31307662 | None:intergenic | 25.0% |
| ! | TTAATGGTTTATTAGGACAA+CGG | - | chr4.1:31307644-31307663 | MS.gene003647:intron | 25.0% |
| ! | TTTATGTGTCATGAACAATA+GGG | - | chr4.1:31307088-31307107 | MS.gene003647:CDS | 25.0% |
| ACATGACAGATCTTTATGTA+TGG | + | chr4.1:31306987-31307006 | None:intergenic | 30.0% | |
| CAACAGAATGTAATTCCAAA+TGG | + | chr4.1:31306812-31306831 | None:intergenic | 30.0% | |
| CAAGAAAATGTTCTTACAAG+TGG | + | chr4.1:31305986-31306005 | None:intergenic | 30.0% | |
| GACAATCAAATTGATACATG+TGG | - | chr4.1:31305957-31305976 | MS.gene003647:CDS | 30.0% | |
| GCCTGACATAAACAATAATA+TGG | - | chr4.1:31307009-31307028 | MS.gene003647:intron | 30.0% | |
| GTTTATGTGTCATGAACAAT+AGG | - | chr4.1:31307087-31307106 | MS.gene003647:CDS | 30.0% | |
| TAAAGTGATGTGACATAGAA+TGG | - | chr4.1:31306381-31306400 | MS.gene003647:intron | 30.0% | |
| ! | AATTCTGATTTTGCTTCCAT+AGG | + | chr4.1:31307246-31307265 | None:intergenic | 30.0% |
| ! | ATGAGTGTGATTTAAAACCT+TGG | - | chr4.1:31307606-31307625 | MS.gene003647:intron | 30.0% |
| ! | ATTCTGATTTTGCTTCCATA+GGG | + | chr4.1:31307245-31307264 | None:intergenic | 30.0% |
| !! | TCCGTTTTTATAAGCTATCT+TGG | - | chr4.1:31306174-31306193 | MS.gene003647:CDS | 30.0% |
| !!! | AAATGGACATATTTTAGCCA+AGG | + | chr4.1:31307626-31307645 | None:intergenic | 30.0% |
| !!! | AACTTTTGAAGTAGCACAAA+AGG | - | chr4.1:31307724-31307743 | MS.gene003647:intron | 30.0% |
| !!! | ATCAGATGCTTCTAGTTTTA+AGG | + | chr4.1:31305855-31305874 | None:intergenic | 30.0% |
| AAAATACCGCATTGAAGACA+TGG | - | chr4.1:31308140-31308159 | MS.gene003647:CDS | 35.0% | |
| AAATACCGCATTGAAGACAT+GGG | - | chr4.1:31308141-31308160 | MS.gene003647:CDS | 35.0% | |
| AAGAAGGAATTGTTCGTCAA+AGG | - | chr4.1:31308277-31308296 | MS.gene003647:CDS | 35.0% | |
| AATGAATTCAAAGAGTCCCA+AGG | - | chr4.1:31306309-31306328 | MS.gene003647:intron | 35.0% | |
| CACTTATAGATAAGCGCTTA+AGG | - | chr4.1:31306068-31306087 | MS.gene003647:CDS | 35.0% | |
| CAGACATGATGTTTAACGTA+TGG | - | chr4.1:31307065-31307084 | MS.gene003647:CDS | 35.0% | |
| CTTACAACAGACATAGAAGA+AGG | + | chr4.1:31305640-31305659 | None:intergenic | 35.0% | |
| GAGAACAATGTCCAATTTGA+GGG | - | chr4.1:31307776-31307795 | MS.gene003647:intron | 35.0% | |
| GTCTCACAATTGCTTATATC+AGG | - | chr4.1:31306270-31306289 | MS.gene003647:intron | 35.0% | |
| TGAAGTAGCACAAAAGGTTT+GGG | - | chr4.1:31307730-31307749 | MS.gene003647:intron | 35.0% | |
| TGAGAACAATGTCCAATTTG+AGG | - | chr4.1:31307775-31307794 | MS.gene003647:intron | 35.0% | |
| TGTTCTTGACAAGTCTGAAT+GGG | - | chr4.1:31305588-31305607 | MS.gene003647:CDS | 35.0% | |
| TTGAAGTAGCACAAAAGGTT+TGG | - | chr4.1:31307729-31307748 | MS.gene003647:intron | 35.0% | |
| TTGACGTTGCATGATAATCA+GGG | + | chr4.1:31307504-31307523 | None:intergenic | 35.0% | |
| TTGTTCTTGACAAGTCTGAA+TGG | - | chr4.1:31305587-31305606 | MS.gene003647:CDS | 35.0% | |
| TTTGACGAACAATTCCTTCT+TGG | + | chr4.1:31308278-31308297 | None:intergenic | 35.0% | |
| ! | ATGTCTTCAATGCGGTATTT+TGG | + | chr4.1:31308141-31308160 | None:intergenic | 35.0% |
| ! | TATGTACAGTTTTTGTCTGG+TGG | - | chr4.1:31308025-31308044 | MS.gene003647:intron | 35.0% |
| ! | TGCTATGTACAGTTTTTGTC+TGG | - | chr4.1:31308022-31308041 | MS.gene003647:intron | 35.0% |
| ! | TTCTGATTTTGCTTCCATAG+GGG | + | chr4.1:31307244-31307263 | None:intergenic | 35.0% |
| !! | AAAGAGAAAAAGAAGTACCG+CGG | + | chr4.1:31305731-31305750 | None:intergenic | 35.0% |
| !!! | AGATGCTTCTAGTTTTAAGG+TGG | + | chr4.1:31305852-31305871 | None:intergenic | 35.0% |
| !!! | TTGTTTTTGTTGCTTGTGTG+TGG | - | chr4.1:31306505-31306524 | MS.gene003647:CDS | 35.0% |
| AATACCGCATTGAAGACATG+GGG | - | chr4.1:31308142-31308161 | MS.gene003647:CDS | 40.0% | |
| ACATAGAAGAAGGTTGACGT+AGG | + | chr4.1:31305630-31305649 | None:intergenic | 40.0% | |
| ACCTTGTCAACTTTGATACC+AGG | + | chr4.1:31306786-31306805 | None:intergenic | 40.0% | |
| AGAAAACAATTGCTTCACCC+GGG | - | chr4.1:31306532-31306551 | MS.gene003647:intron | 40.0% | |
| AGCGGAATAATAAGAAGTCG+AGG | + | chr4.1:31305809-31305828 | None:intergenic | 40.0% | |
| AGTTGACAAGGTAAGCCATT+TGG | - | chr4.1:31306794-31306813 | MS.gene003647:intron | 40.0% | |
| ATCGAGCAAAACATTGTTCC+TGG | - | chr4.1:31306765-31306784 | MS.gene003647:intron | 40.0% | |
| ATCTTGCTTGATGGAGAACA+TGG | - | chr4.1:31307692-31307711 | MS.gene003647:intron | 40.0% | |
| ATGAGTCCAATGCTACATGT+GGG | - | chr4.1:31306574-31306593 | MS.gene003647:intron | 40.0% | |
| ATTGGACATTGTTCTCAGCA+AGG | + | chr4.1:31307772-31307791 | None:intergenic | 40.0% | |
| CAGAAAACAATTGCTTCACC+CGG | - | chr4.1:31306531-31306550 | MS.gene003647:intron | 40.0% | |
| CTCTACCAATCTACAGTTGA+TGG | - | chr4.1:31306720-31306739 | MS.gene003647:CDS | 40.0% | |
| CTTGACGTTGCATGATAATC+AGG | + | chr4.1:31307505-31307524 | None:intergenic | 40.0% | |
| GAGAGTTTCCTCAAAGAGAA+TGG | + | chr4.1:31306703-31306722 | None:intergenic | 40.0% | |
| GAGATATACTCTCCAAGTGA+TGG | + | chr4.1:31306675-31306694 | None:intergenic | 40.0% | |
| GCGGAATAATAAGAAGTCGA+GGG | + | chr4.1:31305808-31305827 | None:intergenic | 40.0% | |
| GGTTTATTAGGACAACGGAT+TGG | - | chr4.1:31307649-31307668 | MS.gene003647:intron | 40.0% | |
| TCCAACTCAATTGCTCAACT+TGG | - | chr4.1:31308220-31308239 | MS.gene003647:CDS | 40.0% | |
| TCCTGGTATCAAAGTTGACA+AGG | - | chr4.1:31306782-31306801 | MS.gene003647:intron | 40.0% | |
| TCCTTCCATCAACTGTAGAT+TGG | + | chr4.1:31306728-31306747 | None:intergenic | 40.0% | |
| TGATGGAACTGTCACAAGAA+GGG | + | chr4.1:31306658-31306677 | None:intergenic | 40.0% | |
| TGTCACATACCATGATACCA+GGG | + | chr4.1:31307919-31307938 | None:intergenic | 40.0% | |
| TTGCATGATAATCAGGGTCA+TGG | + | chr4.1:31307498-31307517 | None:intergenic | 40.0% | |
| ! | AAGATCTCTGGTTCCACAAT+TGG | + | chr4.1:31307677-31307696 | None:intergenic | 40.0% |
| ! | AGATCTCTGGTTCCACAATT+GGG | + | chr4.1:31307676-31307695 | None:intergenic | 40.0% |
| ! | TCACTTGGAGAGTATATCTC+TGG | - | chr4.1:31306675-31306694 | MS.gene003647:CDS | 40.0% |
| ! | TCCAAGTTGAGCAATTGAGT+TGG | + | chr4.1:31308224-31308243 | None:intergenic | 40.0% |
| ! | TCTGATTTTGCTTCCATAGG+GGG | + | chr4.1:31307243-31307262 | None:intergenic | 40.0% |
| !! | ACCAATCTACAGTTGATGGA+AGG | - | chr4.1:31306724-31306743 | MS.gene003647:CDS | 40.0% |
| !! | GTTCATGGCATTCAAGTTGA+GGG | + | chr4.1:31308071-31308090 | None:intergenic | 40.0% |
| !! | TTGAGCAATTGAGTTGGACT+TGG | + | chr4.1:31308218-31308237 | None:intergenic | 40.0% |
| !!! | TTCTAGTTTTAAGGTGGCTG+TGG | + | chr4.1:31305846-31305865 | None:intergenic | 40.0% |
| ACAGTTGTGAGCATCCCAAA+TGG | - | chr4.1:31307332-31307351 | MS.gene003647:intron | 45.0% | |
| AGAAGAAGGTTGACGTAGGA+GGG | + | chr4.1:31305626-31305645 | None:intergenic | 45.0% | |
| ATTCATCGTTGGAACCAGCT+AGG | + | chr4.1:31307123-31307142 | None:intergenic | 45.0% | |
| CAATTCCTTCTTGGCTTCCT+CGG | + | chr4.1:31308269-31308288 | None:intergenic | 45.0% | |
| CTGGTTCCAACGATGAATCA+TGG | - | chr4.1:31307125-31307144 | MS.gene003647:CDS | 45.0% | |
| CTTGTGACAGTTCCATCACT+TGG | - | chr4.1:31306660-31306679 | MS.gene003647:CDS | 45.0% | |
| GAACCAGAGATCTTGCTTGA+TGG | - | chr4.1:31307683-31307702 | MS.gene003647:intron | 45.0% | |
| GACAAGTCTGAATGGGTGAA+GGG | - | chr4.1:31305595-31305614 | MS.gene003647:CDS | 45.0% | |
| GATGAGTCCAATGCTACATG+TGG | - | chr4.1:31306573-31306592 | MS.gene003647:intron | 45.0% | |
| GCTCTAATGGTAAGACCTGA+TGG | + | chr4.1:31305679-31305698 | None:intergenic | 45.0% | |
| GTGGTTGAGGAGTTAAGAAG+CGG | + | chr4.1:31305827-31305846 | None:intergenic | 45.0% | |
| GTGTCACATACCATGATACC+AGG | + | chr4.1:31307920-31307939 | None:intergenic | 45.0% | |
| GTGTCATGAACAATAGGGTC+TGG | - | chr4.1:31307093-31307112 | MS.gene003647:CDS | 45.0% | |
| TAAGACCTGATGGAGCAGTA+GGG | + | chr4.1:31305669-31305688 | None:intergenic | 45.0% | |
| TAGAAGAAGGTTGACGTAGG+AGG | + | chr4.1:31305627-31305646 | None:intergenic | 45.0% | |
| TCAGCTGCATACTACCAACA+AGG | - | chr4.1:31307178-31307197 | MS.gene003647:CDS | 45.0% | |
| TCAGGTCTTACCATTAGAGC+TGG | - | chr4.1:31305679-31305698 | MS.gene003647:CDS | 45.0% | |
| TCGCTATGCTGCAATTAGTC+AGG | - | chr4.1:31307397-31307416 | MS.gene003647:intron | 45.0% | |
| TCTCCATCAAGCAAGATCTC+TGG | + | chr4.1:31307689-31307708 | None:intergenic | 45.0% | |
| TGAACCAATCTCCAAACCCA+TGG | - | chr4.1:31308086-31308105 | MS.gene003647:intron | 45.0% | |
| TGACAAGTCTGAATGGGTGA+AGG | - | chr4.1:31305594-31305613 | MS.gene003647:CDS | 45.0% | |
| TGAGGAGAATGCCCTCAAAT+TGG | + | chr4.1:31307790-31307809 | None:intergenic | 45.0% | |
| TTCATCGTTGGAACCAGCTA+GGG | + | chr4.1:31307122-31307141 | None:intergenic | 45.0% | |
| TTGGCACCATGATTCATCGT+TGG | + | chr4.1:31307134-31307153 | None:intergenic | 45.0% | |
| ! | AACGATGAATCATGGTGCCA+AGG | - | chr4.1:31307133-31307152 | MS.gene003647:CDS | 45.0% |
| ! | AAGGTGCTCGTTTCGCTAAA+TGG | - | chr4.1:31307197-31307216 | MS.gene003647:CDS | 45.0% |
| ! | ACTTGGAAAGTACACTGGTG+AGG | - | chr4.1:31308237-31308256 | MS.gene003647:CDS | 45.0% |
| ! | CTTGGAAAGTACACTGGTGA+GGG | - | chr4.1:31308238-31308257 | MS.gene003647:CDS | 45.0% |
| ! | GCTCAACTTGGAAAGTACAC+TGG | - | chr4.1:31308232-31308251 | MS.gene003647:CDS | 45.0% |
| ! | GTGATGGAACTGTCACAAGA+AGG | + | chr4.1:31306659-31306678 | None:intergenic | 45.0% |
| ! | TGGGTTTGGAGATTGGTTCA+TGG | + | chr4.1:31308086-31308105 | None:intergenic | 45.0% |
| ! | TGTAGCATTGGACTCATCCA+TGG | + | chr4.1:31306571-31306590 | None:intergenic | 45.0% |
| ! | TTTGTCTGGTGGACAATCTG+AGG | - | chr4.1:31308036-31308055 | MS.gene003647:intron | 45.0% |
| !! | GGAAGCGTTTGGCTTCAATT+GGG | - | chr4.1:31306595-31306614 | MS.gene003647:intron | 45.0% |
| !! | GGTTCATGGCATTCAAGTTG+AGG | + | chr4.1:31308072-31308091 | None:intergenic | 45.0% |
| !!! | TTTTAAGGTGGCTGTGGTTG+AGG | + | chr4.1:31305840-31305859 | None:intergenic | 45.0% |
| AAGCCTAGCATGGTTACTCC+AGG | - | chr4.1:31307809-31307828 | MS.gene003647:intron | 50.0% | |
| ACGCTTCCCACATGTAGCAT+TGG | + | chr4.1:31306583-31306602 | None:intergenic | 50.0% | |
| AGCACAAAAGGTTTGGGCTG+AGG | - | chr4.1:31307736-31307755 | MS.gene003647:intron | 50.0% | |
| AGGTCTAAGAGAGAGGGAGA+AGG | - | chr4.1:31306329-31306348 | MS.gene003647:intron | 50.0% | |
| AGTCCCAAGGTCTAAGAGAG+AGG | - | chr4.1:31306322-31306341 | MS.gene003647:intron | 50.0% | |
| ATACCCTCAAGCTCCTTCAC+AGG | - | chr4.1:31307876-31307895 | MS.gene003647:intron | 50.0% | |
| ATGAGAACGACACGTGCCAT+GGG | + | chr4.1:31308105-31308124 | None:intergenic | 50.0% | |
| CATTCTCCTCAAGCCTAGCA+TGG | - | chr4.1:31307799-31307818 | MS.gene003647:intron | 50.0% | |
| CTCCCTCTCTCTTAGACCTT+GGG | + | chr4.1:31306328-31306347 | None:intergenic | 50.0% | |
| GAGTAACCATGCTAGGCTTG+AGG | + | chr4.1:31307808-31307827 | None:intergenic | 50.0% | |
| GTAAGACCTGATGGAGCAGT+AGG | + | chr4.1:31305670-31305689 | None:intergenic | 50.0% | |
| GTAGTATGCAGCTGAACGAG+AGG | + | chr4.1:31307173-31307192 | None:intergenic | 50.0% | |
| GTATAGTCAGCAACTGTGGC+AGG | + | chr4.1:31307860-31307879 | None:intergenic | 50.0% | |
| GTCCCAAGGTCTAAGAGAGA+GGG | - | chr4.1:31306323-31306342 | MS.gene003647:intron | 50.0% | |
| TAGCGAAACGAGCACCTTGT+TGG | + | chr4.1:31307195-31307214 | None:intergenic | 50.0% | |
| TATGAGAACGACACGTGCCA+TGG | + | chr4.1:31308106-31308125 | None:intergenic | 50.0% | |
| TCATCGTTGGAACCAGCTAG+GGG | + | chr4.1:31307121-31307140 | None:intergenic | 50.0% | |
| TCTCCCTCTCTCTTAGACCT+TGG | + | chr4.1:31306329-31306348 | None:intergenic | 50.0% | |
| TCTCCTGTGAAGGAGCTTGA+GGG | + | chr4.1:31307882-31307901 | None:intergenic | 50.0% | |
| TGAATCCGAGGAAGCCAAGA+AGG | - | chr4.1:31308261-31308280 | MS.gene003647:CDS | 50.0% | |
| TTCTCCTGTGAAGGAGCTTG+AGG | + | chr4.1:31307883-31307902 | None:intergenic | 50.0% | |
| ! | GAGGGTATAGTCAGCAACTG+TGG | + | chr4.1:31307864-31307883 | None:intergenic | 50.0% |
| ! | GGCATAGGAACCAGCTCTAA+TGG | + | chr4.1:31305692-31305711 | None:intergenic | 50.0% |
| ! | TGAATCATGGTGCCAAGGTC+TGG | - | chr4.1:31307138-31307157 | MS.gene003647:CDS | 50.0% |
| !! | CAACGGATTGGTCCCAATTG+TGG | - | chr4.1:31307661-31307680 | MS.gene003647:intron | 50.0% |
| !! | CAATTGAGTTGGACTTGGCG+CGG | + | chr4.1:31308213-31308232 | None:intergenic | 50.0% |
| !! | CTCTGGTGCCATTCTCTTTG+AGG | - | chr4.1:31306692-31306711 | MS.gene003647:CDS | 50.0% |
| !! | GGGAAGCGTTTGGCTTCAAT+TGG | - | chr4.1:31306594-31306613 | MS.gene003647:intron | 50.0% |
| !! | TGCTACATGTGGGAAGCGTT+TGG | - | chr4.1:31306584-31306603 | MS.gene003647:intron | 50.0% |
| AACGACACGTGCCATGGGTT+TGG | + | chr4.1:31308100-31308119 | None:intergenic | 55.0% | |
| ACCATGATACCAGGGACAGC+TGG | + | chr4.1:31307911-31307930 | None:intergenic | 55.0% | |
| ACCGCATTGAAGACATGGGG+AGG | - | chr4.1:31308145-31308164 | MS.gene003647:CDS | 55.0% | |
| AGGAGCTGAGTGCAAGGACA+AGG | - | chr4.1:31307829-31307848 | MS.gene003647:intron | 55.0% | |
| ATGATACCAGGGACAGCTGG+GGG | + | chr4.1:31307908-31307927 | None:intergenic | 55.0% | |
| ATGGCCAAAATACCACGCCC+GGG | + | chr4.1:31306552-31306571 | None:intergenic | 55.0% | |
| CATGATACCAGGGACAGCTG+GGG | + | chr4.1:31307909-31307928 | None:intergenic | 55.0% | |
| CATGGCCAAAATACCACGCC+CGG | + | chr4.1:31306553-31306572 | None:intergenic | 55.0% | |
| CCAGAGCAGAGGGACCATTT+GGG | + | chr4.1:31307349-31307368 | None:intergenic | 55.0% | |
| CCATGATACCAGGGACAGCT+GGG | + | chr4.1:31307910-31307929 | None:intergenic | 55.0% | |
| CGTGCCATGGGTTTGGAGAT+TGG | + | chr4.1:31308093-31308112 | None:intergenic | 55.0% | |
| CTGCCTTTACGTTCTCTGCG+CGG | + | chr4.1:31308171-31308190 | None:intergenic | 55.0% | |
| CTGGGGGAATTCTCCTGTGA+AGG | + | chr4.1:31307892-31307911 | None:intergenic | 55.0% | |
| GCCTCCCCATGTCTTCAATG+CGG | + | chr4.1:31308149-31308168 | None:intergenic | 55.0% | |
| GCTCCTGGAGTAACCATGCT+AGG | + | chr4.1:31307815-31307834 | None:intergenic | 55.0% | |
| TACTCCAGGAGCTGAGTGCA+AGG | - | chr4.1:31307823-31307842 | MS.gene003647:intron | 55.0% | |
| TCCTTGACAGCCAGAGCAGA+GGG | + | chr4.1:31307359-31307378 | None:intergenic | 55.0% | |
| TGCAACCCTACTGCTCCATC+AGG | - | chr4.1:31305661-31305680 | MS.gene003647:CDS | 55.0% | |
| TTCCATAGGGGGATCGTGCA+GGG | + | chr4.1:31307232-31307251 | None:intergenic | 55.0% | |
| TTCCTTGACAGCCAGAGCAG+AGG | + | chr4.1:31307360-31307379 | None:intergenic | 55.0% | |
| TTGTCCTTGCACTCAGCTCC+TGG | + | chr4.1:31307830-31307849 | None:intergenic | 55.0% | |
| ! | CAAGAAGGGTACGCCATGCT+TGG | + | chr4.1:31306644-31306663 | None:intergenic | 55.0% |
| ! | TCATGGTGCCAAGGTCTGGA+CGG | - | chr4.1:31307142-31307161 | MS.gene003647:CDS | 55.0% |
| ! | TTCACCCGGGCGTGGTATTT+TGG | - | chr4.1:31306545-31306564 | MS.gene003647:intron | 55.0% |
| !! | CCATGCTTGGCGGTTAGCTT+CGG | + | chr4.1:31306631-31306650 | None:intergenic | 55.0% |
| ACAATTGCTTCACCCGGGCG+TGG | - | chr4.1:31306537-31306556 | MS.gene003647:intron | 60.0% | |
| AGAATTCCCCCAGCTGTCCC+TGG | - | chr4.1:31307899-31307918 | MS.gene003647:intron | 60.0% | |
| AGCATAGCGAGCCAAACCCC+AGG | + | chr4.1:31307387-31307406 | None:intergenic | 60.0% | |
| AGGCAAGACCGTCCAGACCT+TGG | + | chr4.1:31307153-31307172 | None:intergenic | 60.0% | |
| AGGCCGCGCAGAGAACGTAA+AGG | - | chr4.1:31308165-31308184 | MS.gene003647:CDS | 60.0% | |
| CAAGGAAGCAGCCTGGGGTT+TGG | - | chr4.1:31307373-31307392 | MS.gene003647:intron | 60.0% | |
| CACTGGTGAGGGTGAATCCG+AGG | - | chr4.1:31308249-31308268 | MS.gene003647:CDS | 60.0% | |
| CCCAAATGGTCCCTCTGCTC+TGG | - | chr4.1:31307346-31307365 | MS.gene003647:intron | 60.0% | |
| CCCAGCTGTCCCTGGTATCA+TGG | - | chr4.1:31307907-31307926 | MS.gene003647:intron | 60.0% | |
| CCGAAGCTAACCGCCAAGCA+TGG | - | chr4.1:31306628-31306647 | MS.gene003647:intron | 60.0% | |
| CTTCCATAGGGGGATCGTGC+AGG | + | chr4.1:31307233-31307252 | None:intergenic | 60.0% | |
| CTTGACGAGCTCGTCGGCAT+AGG | + | chr4.1:31305707-31305726 | None:intergenic | 60.0% | |
| GCCAGAGCAGAGGGACCATT+TGG | + | chr4.1:31307350-31307369 | None:intergenic | 60.0% | |
| GCTGTCAAGGAAGCAGCCTG+GGG | - | chr4.1:31307368-31307387 | MS.gene003647:intron | 60.0% | |
| GGCTGTCAAGGAAGCAGCCT+GGG | - | chr4.1:31307367-31307386 | MS.gene003647:intron | 60.0% | |
| GTCAGCAACTGTGGCAGGAG+AGG | + | chr4.1:31307855-31307874 | None:intergenic | 60.0% | |
| TCCATAGGGGGATCGTGCAG+GGG | + | chr4.1:31307231-31307250 | None:intergenic | 60.0% | |
| TCCCTCTGCTCTGGCTGTCA+AGG | - | chr4.1:31307355-31307374 | MS.gene003647:intron | 60.0% | |
| TGGCTGTCAAGGAAGCAGCC+TGG | - | chr4.1:31307366-31307385 | MS.gene003647:intron | 60.0% | |
| ! | GAAGGGTACGCCATGCTTGG+CGG | + | chr4.1:31306641-31306660 | None:intergenic | 60.0% |
| !!! | CGGGCGTGGTATTTTGGCCA+TGG | - | chr4.1:31306551-31306570 | MS.gene003647:intron | 60.0% |
| ACCCCTGCACGATCCCCCTA+TGG | - | chr4.1:31307227-31307246 | MS.gene003647:CDS | 65.0% | |
| CGACGAGCTCGTCAAGACCG+CGG | - | chr4.1:31305711-31305730 | MS.gene003647:CDS | 65.0% | |
| CGCGGTCTTGACGAGCTCGT+CGG | + | chr4.1:31305713-31305732 | None:intergenic | 65.0% | |
| TAGGGTCTGGTGCCCCTAGC+TGG | - | chr4.1:31307106-31307125 | MS.gene003647:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 31305550 | 31308312 | 31305550 | ID=MS.gene003647 |
| chr4.1 | mRNA | 31305550 | 31308312 | 31305550 | ID=MS.gene003647.t1;Parent=MS.gene003647 |
| chr4.1 | exon | 31308130 | 31308312 | 31308130 | ID=MS.gene003647.t1.exon1;Parent=MS.gene003647.t1 |
| chr4.1 | CDS | 31308130 | 31308312 | 31308130 | ID=cds.MS.gene003647.t1;Parent=MS.gene003647.t1 |
| chr4.1 | exon | 31307059 | 31307328 | 31307059 | ID=MS.gene003647.t1.exon2;Parent=MS.gene003647.t1 |
| chr4.1 | CDS | 31307059 | 31307328 | 31307059 | ID=cds.MS.gene003647.t1;Parent=MS.gene003647.t1 |
| chr4.1 | exon | 31306644 | 31306753 | 31306644 | ID=MS.gene003647.t1.exon3;Parent=MS.gene003647.t1 |
| chr4.1 | CDS | 31306644 | 31306753 | 31306644 | ID=cds.MS.gene003647.t1;Parent=MS.gene003647.t1 |
| chr4.1 | exon | 31306444 | 31306534 | 31306444 | ID=MS.gene003647.t1.exon4;Parent=MS.gene003647.t1 |
| chr4.1 | CDS | 31306444 | 31306534 | 31306444 | ID=cds.MS.gene003647.t1;Parent=MS.gene003647.t1 |
| chr4.1 | exon | 31305934 | 31306203 | 31305934 | ID=MS.gene003647.t1.exon5;Parent=MS.gene003647.t1 |
| chr4.1 | CDS | 31305934 | 31306203 | 31305934 | ID=cds.MS.gene003647.t1;Parent=MS.gene003647.t1 |
| chr4.1 | exon | 31305550 | 31305828 | 31305550 | ID=MS.gene003647.t1.exon6;Parent=MS.gene003647.t1 |
| chr4.1 | CDS | 31305550 | 31305828 | 31305550 | ID=cds.MS.gene003647.t1;Parent=MS.gene003647.t1 |
| Gene Sequence |
| Protein sequence |
