Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003645.t1 | ACP40514.1 | 98.8 | 400 | 3 | 1 | 1 | 400 | 1 | 398 | 3.20E-219 | 770.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003645.t1 | Q01516 | 95.2 | 355 | 17 | 0 | 46 | 400 | 2 | 356 | 1.3e-192 | 673.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003645.t1 | C3VVN9 | 98.8 | 400 | 3 | 1 | 1 | 400 | 1 | 398 | 2.3e-219 | 770.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene003645 | MS.gene73439 | PPI |
| MS.gene003645 | MS.gene034926 | PPI |
| MS.gene003645 | MS.gene062923 | PPI |
| MS.gene003645 | MS.gene24641 | PPI |
| MS.gene003645 | MS.gene24640 | PPI |
| MS.gene003645 | MS.gene007290 | PPI |
| MS.gene003645 | MS.gene81275 | PPI |
| MS.gene003645 | MS.gene37999 | PPI |
| MS.gene003645 | MS.gene23352 | PPI |
| MS.gene003645 | MS.gene003647 | PPI |
| MS.gene003645 | MS.gene75189 | PPI |
| MS.gene003645 | MS.gene50712 | PPI |
| MS.gene003645 | MS.gene020842 | PPI |
| MS.gene003645 | MS.gene23350 | PPI |
| MS.gene003645 | MS.gene38250 | PPI |
| MS.gene003645 | MS.gene020547 | PPI |
| MS.gene003645 | MS.gene71758 | PPI |
| MS.gene003645 | MS.gene062925 | PPI |
| MS.gene003645 | MS.gene50709 | PPI |
| MS.gene003645 | MS.gene020548 | PPI |
| MS.gene003645 | MS.gene007292 | PPI |
| MS.gene003645 | MS.gene029489 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003645.t1 | MTR_4g071860 | 96.269 | 402 | 11 | 3 | 1 | 400 | 1 | 400 | 0.0 | 781 |
| MS.gene003645.t1 | MTR_4g057670 | 96.020 | 402 | 12 | 3 | 1 | 400 | 1 | 400 | 0.0 | 781 |
| MS.gene003645.t1 | MTR_4g071880 | 90.750 | 400 | 23 | 3 | 1 | 400 | 1 | 386 | 0.0 | 719 |
| MS.gene003645.t1 | MTR_1g109200 | 82.584 | 356 | 61 | 1 | 45 | 400 | 37 | 391 | 0.0 | 614 |
| MS.gene003645.t1 | MTR_5g069055 | 56.534 | 352 | 148 | 4 | 53 | 400 | 8 | 358 | 1.07e-134 | 390 |
| MS.gene003645.t1 | MTR_5g096670 | 56.374 | 353 | 150 | 3 | 51 | 400 | 6 | 357 | 3.77e-133 | 386 |
| MS.gene003645.t1 | MTR_1g061050 | 54.830 | 352 | 154 | 4 | 53 | 400 | 8 | 358 | 5.66e-129 | 375 |
| MS.gene003645.t1 | MTR_5g069050 | 54.571 | 350 | 139 | 5 | 55 | 400 | 51 | 384 | 9.74e-124 | 363 |
| MS.gene003645.t1 | MTR_7g103920 | 46.809 | 94 | 26 | 1 | 157 | 250 | 11 | 80 | 2.43e-20 | 85.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene003645.t1 | AT2G21330 | 82.673 | 404 | 61 | 5 | 1 | 400 | 1 | 399 | 0.0 | 680 |
| MS.gene003645.t1 | AT4G38970 | 83.292 | 401 | 59 | 4 | 4 | 400 | 2 | 398 | 0.0 | 674 |
| MS.gene003645.t1 | AT2G21330 | 80.198 | 404 | 61 | 6 | 1 | 400 | 1 | 389 | 0.0 | 652 |
| MS.gene003645.t1 | AT2G01140 | 75.063 | 397 | 92 | 2 | 4 | 400 | 2 | 391 | 0.0 | 615 |
| MS.gene003645.t1 | AT2G21330 | 82.372 | 312 | 46 | 5 | 1 | 308 | 1 | 307 | 0.0 | 519 |
| MS.gene003645.t1 | AT4G38970 | 79.141 | 326 | 53 | 5 | 4 | 318 | 2 | 323 | 0.0 | 512 |
| MS.gene003645.t1 | AT4G26530 | 56.780 | 354 | 148 | 4 | 51 | 400 | 6 | 358 | 1.34e-136 | 395 |
| MS.gene003645.t1 | AT4G26530 | 56.780 | 354 | 148 | 4 | 51 | 400 | 6 | 358 | 1.34e-136 | 395 |
| MS.gene003645.t1 | AT4G26530 | 56.780 | 354 | 148 | 4 | 51 | 400 | 6 | 358 | 1.34e-136 | 395 |
| MS.gene003645.t1 | AT2G36460 | 56.534 | 352 | 148 | 4 | 53 | 400 | 8 | 358 | 1.93e-134 | 389 |
| MS.gene003645.t1 | AT3G52930 | 55.398 | 352 | 152 | 4 | 53 | 400 | 8 | 358 | 1.25e-131 | 382 |
| MS.gene003645.t1 | AT5G03690 | 55.398 | 352 | 153 | 3 | 53 | 400 | 8 | 359 | 2.04e-129 | 377 |
| MS.gene003645.t1 | AT4G26520 | 55.398 | 352 | 152 | 4 | 53 | 400 | 8 | 358 | 5.39e-127 | 370 |
| MS.gene003645.t1 | AT5G03690 | 55.301 | 349 | 152 | 3 | 56 | 400 | 45 | 393 | 1.40e-126 | 370 |
| MS.gene003645.t1 | AT4G26520 | 55.556 | 351 | 151 | 4 | 53 | 399 | 8 | 357 | 1.79e-126 | 369 |
| MS.gene003645.t1 | AT4G26520 | 55.271 | 351 | 152 | 4 | 54 | 400 | 6 | 355 | 3.10e-126 | 368 |
| MS.gene003645.t1 | AT4G26520 | 55.271 | 351 | 152 | 4 | 54 | 400 | 6 | 355 | 3.10e-126 | 368 |
| MS.gene003645.t1 | AT2G36460 | 55.970 | 268 | 113 | 4 | 137 | 400 | 1 | 267 | 3.19e-98 | 294 |
| MS.gene003645.t1 | AT2G36460 | 55.970 | 268 | 113 | 4 | 137 | 400 | 1 | 267 | 3.19e-98 | 294 |
| MS.gene003645.t1 | AT5G03690 | 54.307 | 267 | 118 | 3 | 138 | 400 | 1 | 267 | 1.56e-91 | 276 |
| MS.gene003645.t1 | AT5G03690 | 54.307 | 267 | 118 | 3 | 138 | 400 | 1 | 267 | 1.56e-91 | 276 |
Find 135 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGACAAACAATTCCTTCT+TGG | 0.220264 | 4.1:+31295034 | None:intergenic |
| TTCACCAGGACGTGGTATTT+TGG | 0.276147 | 4.1:-31296844 | MS.gene003645:CDS |
| TTGTCTTTGCACTCAGCTCC+TGG | 0.319517 | 4.1:+31295538 | None:intergenic |
| TTGAAGTAGCGCAAAAGGTT+TGG | 0.322759 | 4.1:-31295636 | MS.gene003645:CDS |
| GGGAAGCGTTTGGCTTCAAT+TGG | 0.326689 | 4.1:-31296795 | MS.gene003645:CDS |
| CGTGCCATGGGTTTGGAGAT+TGG | 0.341879 | 4.1:+31295219 | None:intergenic |
| ACCATGATACCAGGGACGGC+TGG | 0.342045 | 4.1:+31295457 | None:intergenic |
| CTCTACCAATCTACAGTTGA+TGG | 0.350484 | 4.1:-31296669 | MS.gene003645:CDS |
| ATGTCTTCAATGCGGTGTTT+TGG | 0.356626 | 4.1:+31295171 | None:intergenic |
| AAGATCTCTGGTTCCACAAT+TGG | 0.357070 | 4.1:+31295691 | None:intergenic |
| TGAAGTAGCGCAAAAGGTTT+GGG | 0.358741 | 4.1:-31295635 | MS.gene003645:CDS |
| TGAGGAGAATGCCCTCAAAT+TGG | 0.371449 | 4.1:+31295578 | None:intergenic |
| TGAATCATGGTGCCAAGGTC+TGG | 0.375096 | 4.1:-31296260 | MS.gene003645:CDS |
| TGGCGAAACGAGCACCTTGC+TGG | 0.386451 | 4.1:+31296206 | None:intergenic |
| CTCTGGTGCCATTCTCTTTG+AGG | 0.388489 | 4.1:-31296697 | MS.gene003645:CDS |
| AACGACACGTGCCATGGGTT+TGG | 0.390092 | 4.1:+31295212 | None:intergenic |
| CAGAAGATTGACGGAGGGTT+TGG | 0.393907 | 4.1:+31297688 | None:intergenic |
| TGGGTTTGGAGATTGGTTCA+TGG | 0.399088 | 4.1:+31295226 | None:intergenic |
| GCTCTGATAGTGAGACTTGA+TGG | 0.402824 | 4.1:+31297630 | None:intergenic |
| GTATAGTCAGCAACTGTTGC+AGG | 0.413690 | 4.1:+31295508 | None:intergenic |
| CCATGCTTGGCGGTTAGCTT+CGG | 0.415377 | 4.1:+31296761 | None:intergenic |
| GCTAGAGCAGAGGGACCATT+GGG | 0.417032 | 4.1:+31296031 | None:intergenic |
| TGCTACATGTGGGAAGCGTT+TGG | 0.419407 | 4.1:-31296805 | MS.gene003645:CDS |
| CTTGATGGAGCGGCAGCGGC+AGG | 0.422424 | 4.1:+31297645 | None:intergenic |
| CCCAGCCGTCCCTGGTATCA+TGG | 0.440253 | 4.1:-31295458 | MS.gene003645:intron |
| CTTGTGACAGTTCCATCACT+TGG | 0.443187 | 4.1:-31296729 | MS.gene003645:CDS |
| TCCTTCCATCAACTGTAGAT+TGG | 0.444723 | 4.1:+31296664 | None:intergenic |
| TAGGGTCTGGTGCCCCTAGC+TGG | 0.446675 | 4.1:-31296292 | MS.gene003645:CDS |
| TGCTAGAGCAGAGGGACCAT+TGG | 0.453095 | 4.1:+31296030 | None:intergenic |
| AGCGCAAAAGGTTTGGGCTG+AGG | 0.461119 | 4.1:-31295629 | MS.gene003645:CDS |
| AAGGTGCTCGTTTCGCCAAA+TGG | 0.463790 | 4.1:-31296201 | MS.gene003645:intron |
| AGTTGGACTTAGCACGGAAA+AGG | 0.464478 | 4.1:+31295105 | None:intergenic |
| CAAGGAAGCAGCATGGGGTC+TGG | 0.470228 | 4.1:-31296005 | MS.gene003645:CDS |
| TCCAACTCAATTGCTCAACT+TGG | 0.471150 | 4.1:-31295089 | MS.gene003645:CDS |
| GAACCAGAGATCTTGCTTGA+TGG | 0.472497 | 4.1:-31295682 | MS.gene003645:CDS |
| GTTCATGGCATTCAAGTTGA+GGG | 0.472908 | 4.1:+31295241 | None:intergenic |
| TGAGAACAATGTCCAATTTG+AGG | 0.474283 | 4.1:-31295590 | MS.gene003645:CDS |
| AGATCTCTGGTTCCACAATT+GGG | 0.476937 | 4.1:+31295692 | None:intergenic |
| ACCTTGTCAACTTTGATACC+AGG | 0.478717 | 4.1:+31296606 | None:intergenic |
| TCGCTACGCTGCAATTAGTC+AGG | 0.494622 | 4.1:-31295981 | MS.gene003645:intron |
| AGCAGTCAAGGAAGCAGCAT+GGG | 0.494676 | 4.1:-31296011 | MS.gene003645:CDS |
| AGGCCGCATAGAGAACGTTC+AGG | 0.498349 | 4.1:-31295144 | MS.gene003645:CDS |
| CCATGATACCAGGGACGGCT+GGG | 0.498457 | 4.1:+31295458 | None:intergenic |
| CAAGAAGGGTACGCCATGCT+TGG | 0.498533 | 4.1:+31296748 | None:intergenic |
| GGAAGCGTTTGGCTTCAATT+GGG | 0.502252 | 4.1:-31296794 | MS.gene003645:CDS |
| AAGAAGGAATTGTTTGTCAA+AGG | 0.507696 | 4.1:-31295032 | MS.gene003645:CDS |
| ATTCATCGTTGGAACCAGCT+AGG | 0.510943 | 4.1:+31296278 | None:intergenic |
| TCACTTGGAGAGTATATCTC+TGG | 0.513608 | 4.1:-31296714 | MS.gene003645:CDS |
| GAGAACAATGTCCAATTTGA+GGG | 0.514083 | 4.1:-31295589 | MS.gene003645:CDS |
| TTCATCGTTGGAACCAGCTA+GGG | 0.515096 | 4.1:+31296279 | None:intergenic |
| TTCTCCTGTGAAGGAGCTTG+AGG | 0.524713 | 4.1:+31295485 | None:intergenic |
| AGGCAAGACCGTCCAGACCT+TGG | 0.525040 | 4.1:+31296248 | None:intergenic |
| GAGACTTGATGGAGCGGCAG+CGG | 0.525950 | 4.1:+31297641 | None:intergenic |
| TTGTTCTTGACAAGTCTGAA+TGG | 0.530442 | 4.1:-31297719 | MS.gene003645:CDS |
| GGTTCATGGCATTCAAGTTG+AGG | 0.530771 | 4.1:+31295240 | None:intergenic |
| TATGAGAACGACACGTGCCA+TGG | 0.532775 | 4.1:+31295206 | None:intergenic |
| CATGATACCAGGGACGGCTG+GGG | 0.533740 | 4.1:+31295459 | None:intergenic |
| CAACGGATTGGTCCCAATTG+TGG | 0.534112 | 4.1:-31295704 | MS.gene003645:CDS |
| ATACCCTCAAGCTCCTTCAC+AGG | 0.534468 | 4.1:-31295489 | MS.gene003645:CDS |
| TCTCCATCAAGCAAGATCTC+TGG | 0.540606 | 4.1:+31295679 | None:intergenic |
| TCTCCTGTGAAGGAGCTTGA+GGG | 0.542263 | 4.1:+31295486 | None:intergenic |
| GTCAGCAACTGTTGCAGGAG+AGG | 0.545139 | 4.1:+31295513 | None:intergenic |
| TCCTTGACTGCTAGAGCAGA+GGG | 0.547409 | 4.1:+31296022 | None:intergenic |
| GAGAGTTTCCTCAAAGAGAA+TGG | 0.549338 | 4.1:+31296689 | None:intergenic |
| TGTTCTTGACAAGTCTGAAT+GGG | 0.550387 | 4.1:-31297718 | MS.gene003645:CDS |
| AAGCCTAGCATGGTTACTCC+AGG | 0.551395 | 4.1:-31295556 | MS.gene003645:CDS |
| TGAATCTGAGGAAGCCAAGA+AGG | 0.552492 | 4.1:-31295048 | MS.gene003645:CDS |
| CCCTGGTATCAAAGTTGACA+AGG | 0.553028 | 4.1:-31296607 | MS.gene003645:intron |
| GCTCCTGGAGTAACCATGCT+AGG | 0.553694 | 4.1:+31295553 | None:intergenic |
| CACTGGTGAGGGTGAATCTG+AGG | 0.554064 | 4.1:-31295060 | MS.gene003645:CDS |
| ATCGAGCAAAACATTGTCCC+TGG | 0.554861 | 4.1:-31296624 | MS.gene003645:CDS |
| GAAGGGTACGCCATGCTTGG+CGG | 0.555457 | 4.1:+31296751 | None:intergenic |
| TCCAAGTTGAGCAATTGAGT+TGG | 0.559400 | 4.1:+31295088 | None:intergenic |
| TCAAGTCTCACTATCAGAGC+TGG | 0.559579 | 4.1:-31297627 | MS.gene003645:CDS |
| CTGGTTCCAACGATGAATCA+TGG | 0.559760 | 4.1:-31296273 | MS.gene003645:CDS |
| AAAACACCGCATTGAAGACA+TGG | 0.562057 | 4.1:-31295169 | MS.gene003645:CDS |
| ACGCTTCCCACATGTAGCAT+TGG | 0.563790 | 4.1:+31296809 | None:intergenic |
| CCTTGTCAACTTTGATACCA+GGG | 0.563876 | 4.1:+31296607 | None:intergenic |
| ATCTTGCTTGATGGAGAACA+TGG | 0.567139 | 4.1:-31295673 | MS.gene003645:CDS |
| GTGATGGAACTGTCACAAGA+AGG | 0.571260 | 4.1:+31296733 | None:intergenic |
| GGTTTATTAGGACAACGGAT+TGG | 0.572758 | 4.1:-31295716 | MS.gene003645:intron |
| TCCCTCTGCTCTAGCAGTCA+AGG | 0.573023 | 4.1:-31296023 | MS.gene003645:CDS |
| TGACAAGTCTGAATGGGTGA+AGG | 0.573443 | 4.1:-31297712 | MS.gene003645:CDS |
| ATGATACCAGGGACGGCTGG+GGG | 0.573444 | 4.1:+31295460 | None:intergenic |
| TGTAGCATTGGACTCATCCA+TGG | 0.576571 | 4.1:+31296821 | None:intergenic |
| CAATTGAGTTGGACTTAGCA+CGG | 0.579344 | 4.1:+31295099 | None:intergenic |
| CAGAAAACAATTGCTTCACC+AGG | 0.579605 | 4.1:-31296858 | MS.gene003645:CDS |
| TTTGTCTGGTGGACAATCTG+AGG | 0.579742 | 4.1:-31295273 | MS.gene003645:CDS |
| GTGTCACATACCATGATACC+AGG | 0.579988 | 4.1:+31295448 | None:intergenic |
| GAGATATACTCTCCAAGTGA+TGG | 0.582405 | 4.1:+31296717 | None:intergenic |
| CCGAAGCTAACCGCCAAGCA+TGG | 0.583140 | 4.1:-31296761 | MS.gene003645:CDS |
| CGCGGTCTTAACGAGCTCAT+CGG | 0.585953 | 4.1:+31297596 | None:intergenic |
| TTGGCACCATGATTCATCGT+TGG | 0.586333 | 4.1:+31296267 | None:intergenic |
| ATGAGAACGACACGTGCCAT+GGG | 0.588604 | 4.1:+31295207 | None:intergenic |
| AACGATGAATCATGGTGCCA+AGG | 0.589365 | 4.1:-31296265 | MS.gene003645:CDS |
| CATTCTCCTCAAGCCTAGCA+TGG | 0.591042 | 4.1:-31295566 | MS.gene003645:CDS |
| ATGGCCAAAATACCACGTCC+TGG | 0.591708 | 4.1:+31296840 | None:intergenic |
| CAGCGGACACAGAAGATTGA+CGG | 0.592543 | 4.1:+31297679 | None:intergenic |
| GACAAGTCTGAATGGGTGAA+GGG | 0.593403 | 4.1:-31297711 | MS.gene003645:CDS |
| TTGATGGAGCGGCAGCGGCA+GGG | 0.596865 | 4.1:+31297646 | None:intergenic |
| ATTGGACATTGTTCTCAGCA+AGG | 0.604841 | 4.1:+31295596 | None:intergenic |
| TAGCAGTCAAGGAAGCAGCA+TGG | 0.606109 | 4.1:-31296012 | MS.gene003645:CDS |
| ACCAATCTACAGTTGATGGA+AGG | 0.606822 | 4.1:-31296665 | MS.gene003645:CDS |
| AGGAGCTGAGTGCAAAGACA+AGG | 0.608370 | 4.1:-31295536 | MS.gene003645:CDS |
| TCATGGTGCCAAGGTCTGGA+CGG | 0.610100 | 4.1:-31296256 | MS.gene003645:CDS |
| TGATGGAACTGTCACAAGAA+GGG | 0.610460 | 4.1:+31296734 | None:intergenic |
| TTAATGGTTTATTAGGACAA+CGG | 0.610985 | 4.1:-31295721 | MS.gene003645:intron |
| TTCCTTGACTGCTAGAGCAG+AGG | 0.615019 | 4.1:+31296021 | None:intergenic |
| ACAATTGCTTCACCAGGACG+TGG | 0.615870 | 4.1:-31296852 | MS.gene003645:CDS |
| GAGTAACCATGCTAGGCTTG+AGG | 0.616311 | 4.1:+31295560 | None:intergenic |
| CTTGGAAAGTACACTGGTGA+GGG | 0.616339 | 4.1:-31295071 | MS.gene003645:CDS |
| GAAAAGAGATGCTGATGCAG+AGG | 0.620632 | 4.1:+31297752 | None:intergenic |
| ACTTGGAAAGTACACTGGTG+AGG | 0.631708 | 4.1:-31295072 | MS.gene003645:CDS |
| AAACACCGCATTGAAGACAT+GGG | 0.636689 | 4.1:-31295168 | MS.gene003645:CDS |
| ACTGTTGTGAGCATCCCCAA+TGG | 0.641479 | 4.1:-31296046 | MS.gene003645:CDS |
| ACCGCATTGAAGACATGGGG+AGG | 0.644324 | 4.1:-31295164 | MS.gene003645:CDS |
| GTAGTATGCAGCTGAACGAG+AGG | 0.646365 | 4.1:+31296228 | None:intergenic |
| TGAACCAATCTCCAAACCCA+TGG | 0.649676 | 4.1:-31295223 | MS.gene003645:CDS |
| GCTCAACTTGGAAAGTACAC+TGG | 0.658104 | 4.1:-31295077 | MS.gene003645:CDS |
| ACATACCATGATACCAGGGA+CGG | 0.662310 | 4.1:+31295453 | None:intergenic |
| GATGAGTCCAATGCTACATG+TGG | 0.669307 | 4.1:-31296816 | MS.gene003645:CDS |
| TCAGCTGCATACTACCAGCA+AGG | 0.670241 | 4.1:-31296220 | MS.gene003645:CDS |
| TCATCGTTGGAACCAGCTAG+GGG | 0.675575 | 4.1:+31296280 | None:intergenic |
| GATAGTGAGACTTGATGGAG+CGG | 0.677338 | 4.1:+31297635 | None:intergenic |
| GGCAGGGTTGCATCGTACAG+CGG | 0.680018 | 4.1:+31297662 | None:intergenic |
| GCCTCCCCATGTCTTCAATG+CGG | 0.683668 | 4.1:+31295163 | None:intergenic |
| GCAGTCAAGGAAGCAGCATG+GGG | 0.684056 | 4.1:-31296010 | MS.gene003645:CDS |
| GGACACAGAAGATTGACGGA+GGG | 0.689595 | 4.1:+31297683 | None:intergenic |
| CGGACACAGAAGATTGACGG+AGG | 0.692714 | 4.1:+31297682 | None:intergenic |
| CTGCCTGAACGTTCTCTATG+CGG | 0.711654 | 4.1:+31295141 | None:intergenic |
| AACACCGCATTGAAGACATG+GGG | 0.713863 | 4.1:-31295167 | MS.gene003645:CDS |
| CGATGAGCTCGTTAAGACCG+CGG | 0.717465 | 4.1:-31297595 | MS.gene003645:intron |
| CTAGAGCAGAGGGACCATTG+GGG | 0.733948 | 4.1:+31296032 | None:intergenic |
| TGTCACATACCATGATACCA+GGG | 0.737737 | 4.1:+31295449 | None:intergenic |
| ATGAGTCCAATGCTACATGT+GGG | 0.746520 | 4.1:-31296815 | MS.gene003645:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTACATAAATAATTTTATCA+AGG | - | chr4.1:31296866-31296885 | MS.gene003645:intron | 10.0% |
| !! | GCTAAAATTTATTCATTTAA+TGG | - | chr4.1:31297038-31297057 | MS.gene003645:intron | 15.0% |
| !! | TATGAATAAAGATAAAAGTT+TGG | + | chr4.1:31297379-31297398 | None:intergenic | 15.0% |
| !! | TATTCATTTAATGGTTTATT+AGG | - | chr4.1:31297047-31297066 | MS.gene003645:intron | 15.0% |
| !!! | AACATTTTATTTTATTCCAA+TGG | + | chr4.1:31295612-31295631 | None:intergenic | 15.0% |
| !!! | TATTTGTTTTTTTATACTGT+TGG | - | chr4.1:31296648-31296667 | MS.gene003645:CDS | 15.0% |
| !!! | TATTTTTTTCTAGAAAGTAT+GGG | - | chr4.1:31295781-31295800 | MS.gene003645:intron | 15.0% |
| !!! | TTATTTTTTTCTAGAAAGTA+TGG | - | chr4.1:31295780-31295799 | MS.gene003645:intron | 15.0% |
| !! | CAAAATACAATATACAACTT+TGG | + | chr4.1:31297470-31297489 | None:intergenic | 20.0% |
| !! | CATATTTGTTTAAAAGAACT+AGG | + | chr4.1:31295249-31295268 | None:intergenic | 20.0% |
| !! | TCTAATAGAGTAATATCATT+CGG | - | chr4.1:31296320-31296339 | MS.gene003645:intron | 20.0% |
| !! | TTAAATTCTTAAAATTGACG+TGG | - | chr4.1:31295631-31295650 | MS.gene003645:CDS | 20.0% |
| !! | TTCATATTATTGTTTATGTC+AGG | + | chr4.1:31296390-31296409 | None:intergenic | 20.0% |
| !!! | AAATGAATAAATTTTAGCCA+AGG | + | chr4.1:31297036-31297055 | None:intergenic | 20.0% |
| !!! | TTCATTTTAGTAACAACATA+AGG | + | chr4.1:31296211-31296230 | None:intergenic | 20.0% |
| ! | AATCACTTGTATAATTTGAG+TGG | + | chr4.1:31296828-31296847 | None:intergenic | 25.0% |
| ! | AATGCAAAGAACAATGTATT+TGG | + | chr4.1:31297356-31297375 | None:intergenic | 25.0% |
| ! | AATTGATGAAAAGAATAACC+AGG | - | chr4.1:31296255-31296274 | MS.gene003645:CDS | 25.0% |
| ! | GTTAAAAACAGGTTCTTATT+TGG | - | chr4.1:31295446-31295465 | MS.gene003645:intron | 25.0% |
| ! | TTAATGGTTTATTAGGACAA+CGG | - | chr4.1:31297054-31297073 | MS.gene003645:intron | 25.0% |
| ! | TTACATTGTTCATGTTTCAT+TGG | - | chr4.1:31295851-31295870 | MS.gene003645:intron | 25.0% |
| ! | TTTAGTGACTTAAAATGAGA+AGG | - | chr4.1:31295519-31295538 | MS.gene003645:CDS | 25.0% |
| !! | ATGAGATTGATTTAAAACCT+TGG | - | chr4.1:31297016-31297035 | MS.gene003645:intron | 25.0% |
| !! | ATGCTCTAAGTAGATAAAAA+TGG | + | chr4.1:31295397-31295416 | None:intergenic | 25.0% |
| !! | TGTTATGTATAGTTTTTGTC+TGG | - | chr4.1:31297488-31297507 | MS.gene003645:intron | 25.0% |
| !!! | TTAATTCTTTTTTGCACAGT+GGG | - | chr4.1:31295303-31295322 | MS.gene003645:intron | 25.0% |
| !!! | TTTAATTCTTTTTTGCACAG+TGG | - | chr4.1:31295302-31295321 | MS.gene003645:intron | 25.0% |
| AAGAAGGAATTGTTTGTCAA+AGG | - | chr4.1:31297743-31297762 | MS.gene003645:CDS | 30.0% | |
| AAGTTCATCGATAGTATACA+TGG | + | chr4.1:31295361-31295380 | None:intergenic | 30.0% | |
| ATATGTGATTGAAATTCGCA+TGG | + | chr4.1:31296702-31296721 | None:intergenic | 30.0% | |
| ATGGAAAGGGACATTAAAAA+TGG | - | chr4.1:31295655-31295674 | MS.gene003645:CDS | 30.0% | |
| CAACATAAGGTAATTCCAAA+TGG | + | chr4.1:31296198-31296217 | None:intergenic | 30.0% | |
| CAGAAATGATGTTTAACGTA+TGG | - | chr4.1:31296442-31296461 | MS.gene003645:intron | 30.0% | |
| CATTAAAAACCTTGATGTTG+CGG | + | chr4.1:31296922-31296941 | None:intergenic | 30.0% | |
| GCGAATTTCAATCACATATT+AGG | - | chr4.1:31296703-31296722 | MS.gene003645:CDS | 30.0% | |
| TTAAGTTAAGTATCATACCG+CGG | + | chr4.1:31295200-31295219 | None:intergenic | 30.0% | |
| TTTATGTGCCATGAACAATA+GGG | - | chr4.1:31296465-31296484 | MS.gene003645:intron | 30.0% | |
| TTTGACAAACAATTCCTTCT+TGG | + | chr4.1:31297744-31297763 | None:intergenic | 30.0% | |
| ! | CATCAAGGTTTTTAATGTCT+TGG | - | chr4.1:31296925-31296944 | MS.gene003645:intron | 30.0% |
| ! | TATGTATAGTTTTTGTCTGG+TGG | - | chr4.1:31297491-31297510 | MS.gene003645:intron | 30.0% |
| ! | TATTCTTTGTTGCTTGTGTA+TGG | - | chr4.1:31295891-31295910 | MS.gene003645:intron | 30.0% |
| !!! | AATTTTGATTTTGCTTCCAC+AGG | + | chr4.1:31296619-31296638 | None:intergenic | 30.0% |
| AAGGAGTTGAAAGTGAGATA+AGG | - | chr4.1:31295568-31295587 | MS.gene003645:CDS | 35.0% | |
| ACATGACACATCTTTCTGTA+TGG | + | chr4.1:31296364-31296383 | None:intergenic | 35.0% | |
| AGAAGGTAGACTTAAGAAAG+TGG | - | chr4.1:31295536-31295555 | MS.gene003645:CDS | 35.0% | |
| CTAGGTTCAGTTATGCTAAT+TGG | + | chr4.1:31295231-31295250 | None:intergenic | 35.0% | |
| GAAGGTAGACTTAAGAAAGT+GGG | - | chr4.1:31295537-31295556 | MS.gene003645:CDS | 35.0% | |
| GAGAACAATGTCCAATTTGA+GGG | - | chr4.1:31297186-31297205 | MS.gene003645:intron | 35.0% | |
| GAGCTCTTGAAGTTAAAAAC+AGG | - | chr4.1:31295435-31295454 | MS.gene003645:intron | 35.0% | |
| GTTTATGTGCCATGAACAAT+AGG | - | chr4.1:31296464-31296483 | MS.gene003645:intron | 35.0% | |
| TCAAGTAGACACTAACCATT+TGG | + | chr4.1:31296592-31296611 | None:intergenic | 35.0% | |
| TGAGAACAATGTCCAATTTG+AGG | - | chr4.1:31297185-31297204 | MS.gene003645:intron | 35.0% | |
| TGAGATACATGTTACACCAT+TGG | - | chr4.1:31295593-31295612 | MS.gene003645:CDS | 35.0% | |
| TGTTCTTGACAAGTCTGAAT+GGG | - | chr4.1:31295057-31295076 | MS.gene003645:CDS | 35.0% | |
| TTCTTAAAATTGACGTGGCA+TGG | - | chr4.1:31295636-31295655 | MS.gene003645:CDS | 35.0% | |
| TTGTTCTTGACAAGTCTGAA+TGG | - | chr4.1:31295056-31295075 | MS.gene003645:CDS | 35.0% | |
| ! | AGAGTTGGTTGAATTTCATG+AGG | - | chr4.1:31295479-31295498 | MS.gene003645:CDS | 35.0% |
| !! | TAGTTTTCAAACTAGCTTGC+TGG | - | chr4.1:31295330-31295349 | MS.gene003645:intron | 35.0% |
| !! | TTTGGCTATAACTCTAGAGT+TGG | - | chr4.1:31295464-31295483 | MS.gene003645:CDS | 35.0% |
| !!! | AACTTTTGAAGTAGCGCAAA+AGG | - | chr4.1:31297134-31297153 | MS.gene003645:intron | 35.0% |
| AAAACACCGCATTGAAGACA+TGG | - | chr4.1:31297606-31297625 | MS.gene003645:CDS | 40.0% | |
| AAAATTGACGTGGCATGGAA+AGG | - | chr4.1:31295641-31295660 | MS.gene003645:CDS | 40.0% | |
| AAACACCGCATTGAAGACAT+GGG | - | chr4.1:31297607-31297626 | MS.gene003645:CDS | 40.0% | |
| AAATTGACGTGGCATGGAAA+GGG | - | chr4.1:31295642-31295661 | MS.gene003645:CDS | 40.0% | |
| AAGAAAGTGGGTGAAGGAAA+AGG | - | chr4.1:31295549-31295568 | MS.gene003645:CDS | 40.0% | |
| ACCTTGTCAACTTTGATACC+AGG | + | chr4.1:31296172-31296191 | None:intergenic | 40.0% | |
| AGACTTAAGAAAGTGGGTGA+AGG | - | chr4.1:31295543-31295562 | MS.gene003645:CDS | 40.0% | |
| AGTTGACAAGGTAAGCCATT+TGG | - | chr4.1:31296180-31296199 | MS.gene003645:intron | 40.0% | |
| ATCTTGCTTGATGGAGAACA+TGG | - | chr4.1:31297102-31297121 | MS.gene003645:intron | 40.0% | |
| ATGAGTCCAATGCTACATGT+GGG | - | chr4.1:31295960-31295979 | MS.gene003645:intron | 40.0% | |
| ATTGGACATTGTTCTCAGCA+AGG | + | chr4.1:31297182-31297201 | None:intergenic | 40.0% | |
| CAGAAAACAATTGCTTCACC+AGG | - | chr4.1:31295917-31295936 | MS.gene003645:intron | 40.0% | |
| CCTTGTCAACTTTGATACCA+GGG | + | chr4.1:31296171-31296190 | None:intergenic | 40.0% | |
| CTCTACCAATCTACAGTTGA+TGG | - | chr4.1:31296106-31296125 | MS.gene003645:intron | 40.0% | |
| CTTGATGTTGCGGTTAAAGT+CGG | + | chr4.1:31296912-31296931 | None:intergenic | 40.0% | |
| GAGAGTTTCCTCAAAGAGAA+TGG | + | chr4.1:31296089-31296108 | None:intergenic | 40.0% | |
| GAGATATACTCTCCAAGTGA+TGG | + | chr4.1:31296061-31296080 | None:intergenic | 40.0% | |
| GGTTTATTAGGACAACGGAT+TGG | - | chr4.1:31297059-31297078 | MS.gene003645:intron | 40.0% | |
| TCCAACTCAATTGCTCAACT+TGG | - | chr4.1:31297686-31297705 | MS.gene003645:CDS | 40.0% | |
| TCCTTCCATCAACTGTAGAT+TGG | + | chr4.1:31296114-31296133 | None:intergenic | 40.0% | |
| TGAAGTAGCGCAAAAGGTTT+GGG | - | chr4.1:31297140-31297159 | MS.gene003645:intron | 40.0% | |
| TGATGGAACTGTCACAAGAA+GGG | + | chr4.1:31296044-31296063 | None:intergenic | 40.0% | |
| TGTCACATACCATGATACCA+GGG | + | chr4.1:31297329-31297348 | None:intergenic | 40.0% | |
| TTGAAGTAGCGCAAAAGGTT+TGG | - | chr4.1:31297139-31297158 | MS.gene003645:intron | 40.0% | |
| TTGATGTTGCGGTTAAAGTC+GGG | + | chr4.1:31296911-31296930 | None:intergenic | 40.0% | |
| ! | AAGATCTCTGGTTCCACAAT+TGG | + | chr4.1:31297087-31297106 | None:intergenic | 40.0% |
| ! | AGATCTCTGGTTCCACAATT+GGG | + | chr4.1:31297086-31297105 | None:intergenic | 40.0% |
| ! | ATGTCTTCAATGCGGTGTTT+TGG | + | chr4.1:31297607-31297626 | None:intergenic | 40.0% |
| ! | TCACTTGGAGAGTATATCTC+TGG | - | chr4.1:31296061-31296080 | MS.gene003645:intron | 40.0% |
| ! | TCCAAGTTGAGCAATTGAGT+TGG | + | chr4.1:31297690-31297709 | None:intergenic | 40.0% |
| !! | ACCAATCTACAGTTGATGGA+AGG | - | chr4.1:31296110-31296129 | MS.gene003645:intron | 40.0% |
| !! | CAATTGAGTTGGACTTAGCA+CGG | + | chr4.1:31297679-31297698 | None:intergenic | 40.0% |
| !! | GTTCATGGCATTCAAGTTGA+GGG | + | chr4.1:31297537-31297556 | None:intergenic | 40.0% |
| !! | TTTGATTTTGCTTCCACAGG+AGG | + | chr4.1:31296616-31296635 | None:intergenic | 40.0% |
| AACACCGCATTGAAGACATG+GGG | - | chr4.1:31297608-31297627 | MS.gene003645:CDS | 45.0% | |
| ACATACCATGATACCAGGGA+CGG | + | chr4.1:31297325-31297344 | None:intergenic | 45.0% | |
| AGTTGGACTTAGCACGGAAA+AGG | + | chr4.1:31297673-31297692 | None:intergenic | 45.0% | |
| ATCGAGCAAAACATTGTCCC+TGG | - | chr4.1:31296151-31296170 | MS.gene003645:intron | 45.0% | |
| ATTCATCGTTGGAACCAGCT+AGG | + | chr4.1:31296500-31296519 | None:intergenic | 45.0% | |
| CAGAAACAGATACAGACACC+AGG | - | chr4.1:31297417-31297436 | MS.gene003645:intron | 45.0% | |
| CCCTGGTATCAAAGTTGACA+AGG | - | chr4.1:31296168-31296187 | MS.gene003645:intron | 45.0% | |
| CGACTTTAACCGCAACATCA+AGG | - | chr4.1:31296910-31296929 | MS.gene003645:intron | 45.0% | |
| CTGCATCAACAATGCGAAAG+TGG | + | chr4.1:31295744-31295763 | None:intergenic | 45.0% | |
| CTGGTTCCAACGATGAATCA+TGG | - | chr4.1:31296502-31296521 | MS.gene003645:intron | 45.0% | |
| CTTGTGACAGTTCCATCACT+TGG | - | chr4.1:31296046-31296065 | MS.gene003645:CDS | 45.0% | |
| GAAAAGAGATGCTGATGCAG+AGG | + | chr4.1:31295026-31295045 | None:intergenic | 45.0% | |
| GAACCAGAGATCTTGCTTGA+TGG | - | chr4.1:31297093-31297112 | MS.gene003645:intron | 45.0% | |
| GACAAGTCTGAATGGGTGAA+GGG | - | chr4.1:31295064-31295083 | MS.gene003645:CDS | 45.0% | |
| GATAGTGAGACTTGATGGAG+CGG | + | chr4.1:31295143-31295162 | None:intergenic | 45.0% | |
| GATGAGTCCAATGCTACATG+TGG | - | chr4.1:31295959-31295978 | MS.gene003645:intron | 45.0% | |
| GTATAGTCAGCAACTGTTGC+AGG | + | chr4.1:31297270-31297289 | None:intergenic | 45.0% | |
| GTGTCACATACCATGATACC+AGG | + | chr4.1:31297330-31297349 | None:intergenic | 45.0% | |
| TATACATCAGCAAGCACTCC+TGG | + | chr4.1:31296276-31296295 | None:intergenic | 45.0% | |
| TCAAGTCTCACTATCAGAGC+TGG | - | chr4.1:31295148-31295167 | MS.gene003645:CDS | 45.0% | |
| TCTCCATCAAGCAAGATCTC+TGG | + | chr4.1:31297099-31297118 | None:intergenic | 45.0% | |
| TGAACCAATCTCCAAACCCA+TGG | - | chr4.1:31297552-31297571 | MS.gene003645:intron | 45.0% | |
| TGAATCTGAGGAAGCCAAGA+AGG | - | chr4.1:31297727-31297746 | MS.gene003645:CDS | 45.0% | |
| TGACAAGTCTGAATGGGTGA+AGG | - | chr4.1:31295063-31295082 | MS.gene003645:CDS | 45.0% | |
| TGAGGAGAATGCCCTCAAAT+TGG | + | chr4.1:31297200-31297219 | None:intergenic | 45.0% | |
| TTCATCGTTGGAACCAGCTA+GGG | + | chr4.1:31296499-31296518 | None:intergenic | 45.0% | |
| TTGGCACCATGATTCATCGT+TGG | + | chr4.1:31296511-31296530 | None:intergenic | 45.0% | |
| ! | AACGATGAATCATGGTGCCA+AGG | - | chr4.1:31296510-31296529 | MS.gene003645:intron | 45.0% |
| ! | ACTTGGAAAGTACACTGGTG+AGG | - | chr4.1:31297703-31297722 | MS.gene003645:CDS | 45.0% |
| ! | CTTGGAAAGTACACTGGTGA+GGG | - | chr4.1:31297704-31297723 | MS.gene003645:CDS | 45.0% |
| ! | GCTCAACTTGGAAAGTACAC+TGG | - | chr4.1:31297698-31297717 | MS.gene003645:CDS | 45.0% |
| ! | GCTCTGATAGTGAGACTTGA+TGG | + | chr4.1:31295148-31295167 | None:intergenic | 45.0% |
| ! | GTGATGGAACTGTCACAAGA+AGG | + | chr4.1:31296045-31296064 | None:intergenic | 45.0% |
| ! | TGGGTTTGGAGATTGGTTCA+TGG | + | chr4.1:31297552-31297571 | None:intergenic | 45.0% |
| ! | TGTAGCATTGGACTCATCCA+TGG | + | chr4.1:31295957-31295976 | None:intergenic | 45.0% |
| ! | TTCACCAGGACGTGGTATTT+TGG | - | chr4.1:31295931-31295950 | MS.gene003645:intron | 45.0% |
| ! | TTTGTCTGGTGGACAATCTG+AGG | - | chr4.1:31297502-31297521 | MS.gene003645:intron | 45.0% |
| !! | GGAAGCGTTTGGCTTCAATT+GGG | - | chr4.1:31295981-31296000 | MS.gene003645:intron | 45.0% |
| !! | GGTTCATGGCATTCAAGTTG+AGG | + | chr4.1:31297538-31297557 | None:intergenic | 45.0% |
| AAGCCTAGCATGGTTACTCC+AGG | - | chr4.1:31297219-31297238 | MS.gene003645:intron | 50.0% | |
| ACAATTGCTTCACCAGGACG+TGG | - | chr4.1:31295923-31295942 | MS.gene003645:intron | 50.0% | |
| ACGCTTCCCACATGTAGCAT+TGG | + | chr4.1:31295969-31295988 | None:intergenic | 50.0% | |
| ACTGTTGTGAGCATCCCCAA+TGG | - | chr4.1:31296729-31296748 | MS.gene003645:CDS | 50.0% | |
| AGCAGTCAAGGAAGCAGCAT+GGG | - | chr4.1:31296764-31296783 | MS.gene003645:CDS | 50.0% | |
| AGGAGCTGAGTGCAAAGACA+AGG | - | chr4.1:31297239-31297258 | MS.gene003645:intron | 50.0% | |
| ATACCCTCAAGCTCCTTCAC+AGG | - | chr4.1:31297286-31297305 | MS.gene003645:intron | 50.0% | |
| ATGAGAACGACACGTGCCAT+GGG | + | chr4.1:31297571-31297590 | None:intergenic | 50.0% | |
| ATGGCCAAAATACCACGTCC+TGG | + | chr4.1:31295938-31295957 | None:intergenic | 50.0% | |
| CAGAAGATTGACGGAGGGTT+TGG | + | chr4.1:31295090-31295109 | None:intergenic | 50.0% | |
| CAGCGGACACAGAAGATTGA+CGG | + | chr4.1:31295099-31295118 | None:intergenic | 50.0% | |
| CATTCTCCTCAAGCCTAGCA+TGG | - | chr4.1:31297209-31297228 | MS.gene003645:intron | 50.0% | |
| CTGCCTGAACGTTCTCTATG+CGG | + | chr4.1:31297637-31297656 | None:intergenic | 50.0% | |
| GAGTAACCATGCTAGGCTTG+AGG | + | chr4.1:31297218-31297237 | None:intergenic | 50.0% | |
| GCACCAGACCCTATTGTTCA+TGG | + | chr4.1:31296476-31296495 | None:intergenic | 50.0% | |
| GGACACAGAAGATTGACGGA+GGG | + | chr4.1:31295095-31295114 | None:intergenic | 50.0% | |
| GTAGTATGCAGCTGAACGAG+AGG | + | chr4.1:31296550-31296569 | None:intergenic | 50.0% | |
| GTGCCATGAACAATAGGGTC+TGG | - | chr4.1:31296470-31296489 | MS.gene003645:intron | 50.0% | |
| GTGTCTACTTGATCCTCCTG+TGG | - | chr4.1:31296600-31296619 | MS.gene003645:intron | 50.0% | |
| TAGCAGTCAAGGAAGCAGCA+TGG | - | chr4.1:31296763-31296782 | MS.gene003645:CDS | 50.0% | |
| TATGAGAACGACACGTGCCA+TGG | + | chr4.1:31297572-31297591 | None:intergenic | 50.0% | |
| TCAGCTGCATACTACCAGCA+AGG | - | chr4.1:31296555-31296574 | MS.gene003645:intron | 50.0% | |
| TCATCGTTGGAACCAGCTAG+GGG | + | chr4.1:31296498-31296517 | None:intergenic | 50.0% | |
| TCCTTGACTGCTAGAGCAGA+GGG | + | chr4.1:31296756-31296775 | None:intergenic | 50.0% | |
| TCGCTACGCTGCAATTAGTC+AGG | - | chr4.1:31296794-31296813 | MS.gene003645:CDS | 50.0% | |
| TCTCCTGTGAAGGAGCTTGA+GGG | + | chr4.1:31297292-31297311 | None:intergenic | 50.0% | |
| TTCCTTGACTGCTAGAGCAG+AGG | + | chr4.1:31296757-31296776 | None:intergenic | 50.0% | |
| TTCTCCTGTGAAGGAGCTTG+AGG | + | chr4.1:31297293-31297312 | None:intergenic | 50.0% | |
| TTGTCTTTGCACTCAGCTCC+TGG | + | chr4.1:31297240-31297259 | None:intergenic | 50.0% | |
| ! | AAGGTGCTCGTTTCGCCAAA+TGG | - | chr4.1:31296574-31296593 | MS.gene003645:intron | 50.0% |
| ! | TGAATCATGGTGCCAAGGTC+TGG | - | chr4.1:31296515-31296534 | MS.gene003645:intron | 50.0% |
| !! | CAACGGATTGGTCCCAATTG+TGG | - | chr4.1:31297071-31297090 | MS.gene003645:intron | 50.0% |
| !! | CTCTGGTGCCATTCTCTTTG+AGG | - | chr4.1:31296078-31296097 | MS.gene003645:intron | 50.0% |
| !! | GGGAAGCGTTTGGCTTCAAT+TGG | - | chr4.1:31295980-31295999 | MS.gene003645:intron | 50.0% |
| !! | TGCTACATGTGGGAAGCGTT+TGG | - | chr4.1:31295970-31295989 | MS.gene003645:intron | 50.0% |
| !!! | AGGACGTGGTATTTTGGCCA+TGG | - | chr4.1:31295937-31295956 | MS.gene003645:intron | 50.0% |
| AACGACACGTGCCATGGGTT+TGG | + | chr4.1:31297566-31297585 | None:intergenic | 55.0% | |
| ACCGCATTGAAGACATGGGG+AGG | - | chr4.1:31297611-31297630 | MS.gene003645:CDS | 55.0% | |
| AGCGCAAAAGGTTTGGGCTG+AGG | - | chr4.1:31297146-31297165 | MS.gene003645:intron | 55.0% | |
| AGGCCGCATAGAGAACGTTC+AGG | - | chr4.1:31297631-31297650 | MS.gene003645:CDS | 55.0% | |
| CACTGGTGAGGGTGAATCTG+AGG | - | chr4.1:31297715-31297734 | MS.gene003645:CDS | 55.0% | |
| CGATGAGCTCGTTAAGACCG+CGG | - | chr4.1:31295180-31295199 | MS.gene003645:CDS | 55.0% | |
| CGCGGTCTTAACGAGCTCAT+CGG | + | chr4.1:31295182-31295201 | None:intergenic | 55.0% | |
| CGGACACAGAAGATTGACGG+AGG | + | chr4.1:31295096-31295115 | None:intergenic | 55.0% | |
| CGTGCCATGGGTTTGGAGAT+TGG | + | chr4.1:31297559-31297578 | None:intergenic | 55.0% | |
| CTAGAGCAGAGGGACCATTG+GGG | + | chr4.1:31296746-31296765 | None:intergenic | 55.0% | |
| CTGGGGGAATTCTCCTGTGA+AGG | + | chr4.1:31297302-31297321 | None:intergenic | 55.0% | |
| GAATGTGTCAGCATCGTGCC+TGG | + | chr4.1:31297438-31297457 | None:intergenic | 55.0% | |
| GCAGTCAAGGAAGCAGCATG+GGG | - | chr4.1:31296765-31296784 | MS.gene003645:CDS | 55.0% | |
| GCCTCCCCATGTCTTCAATG+CGG | + | chr4.1:31297615-31297634 | None:intergenic | 55.0% | |
| GCTAGAGCAGAGGGACCATT+GGG | + | chr4.1:31296747-31296766 | None:intergenic | 55.0% | |
| GCTCCTGGAGTAACCATGCT+AGG | + | chr4.1:31297225-31297244 | None:intergenic | 55.0% | |
| GTCAGCAACTGTTGCAGGAG+AGG | + | chr4.1:31297265-31297284 | None:intergenic | 55.0% | |
| TCCCTCTGCTCTAGCAGTCA+AGG | - | chr4.1:31296752-31296771 | MS.gene003645:CDS | 55.0% | |
| TGCTAGAGCAGAGGGACCAT+TGG | + | chr4.1:31296748-31296767 | None:intergenic | 55.0% | |
| ! | CAAGAAGGGTACGCCATGCT+TGG | + | chr4.1:31296030-31296049 | None:intergenic | 55.0% |
| ! | TCATGGTGCCAAGGTCTGGA+CGG | - | chr4.1:31296519-31296538 | MS.gene003645:intron | 55.0% |
| !! | CCATGCTTGGCGGTTAGCTT+CGG | + | chr4.1:31296017-31296036 | None:intergenic | 55.0% |
| ACCATGATACCAGGGACGGC+TGG | + | chr4.1:31297321-31297340 | None:intergenic | 60.0% | |
| AGGCAAGACCGTCCAGACCT+TGG | + | chr4.1:31296530-31296549 | None:intergenic | 60.0% | |
| ATGATACCAGGGACGGCTGG+GGG | + | chr4.1:31297318-31297337 | None:intergenic | 60.0% | |
| CAAGGAAGCAGCATGGGGTC+TGG | - | chr4.1:31296770-31296789 | MS.gene003645:CDS | 60.0% | |
| CATGATACCAGGGACGGCTG+GGG | + | chr4.1:31297319-31297338 | None:intergenic | 60.0% | |
| CCATGATACCAGGGACGGCT+GGG | + | chr4.1:31297320-31297339 | None:intergenic | 60.0% | |
| CCGAAGCTAACCGCCAAGCA+TGG | - | chr4.1:31296014-31296033 | MS.gene003645:CDS | 60.0% | |
| GAGACTTGATGGAGCGGCAG+CGG | + | chr4.1:31295137-31295156 | None:intergenic | 60.0% | |
| GGCAGGGTTGCATCGTACAG+CGG | + | chr4.1:31295116-31295135 | None:intergenic | 60.0% | |
| TGGCGAAACGAGCACCTTGC+TGG | + | chr4.1:31296572-31296591 | None:intergenic | 60.0% | |
| ! | GAAGGGTACGCCATGCTTGG+CGG | + | chr4.1:31296027-31296046 | None:intergenic | 60.0% |
| AGAATTCCCCCAGCCGTCCC+TGG | - | chr4.1:31297309-31297328 | MS.gene003645:intron | 65.0% | |
| CCCAGCCGTCCCTGGTATCA+TGG | - | chr4.1:31297317-31297336 | MS.gene003645:intron | 65.0% | |
| TAGGGTCTGGTGCCCCTAGC+TGG | - | chr4.1:31296483-31296502 | MS.gene003645:intron | 65.0% | |
| TTGATGGAGCGGCAGCGGCA+GGG | + | chr4.1:31295132-31295151 | None:intergenic | 65.0% | |
| CTTGATGGAGCGGCAGCGGC+AGG | + | chr4.1:31295133-31295152 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 31295019 | 31297778 | 31295019 | ID=MS.gene003645 |
| chr4.1 | mRNA | 31295019 | 31297778 | 31295019 | ID=MS.gene003645.t1;Parent=MS.gene003645 |
| chr4.1 | exon | 31297596 | 31297778 | 31297596 | ID=MS.gene003645.t1.exon1;Parent=MS.gene003645.t1 |
| chr4.1 | CDS | 31297596 | 31297778 | 31297596 | ID=cds.MS.gene003645.t1;Parent=MS.gene003645.t1 |
| chr4.1 | exon | 31296608 | 31296877 | 31296608 | ID=MS.gene003645.t1.exon2;Parent=MS.gene003645.t1 |
| chr4.1 | CDS | 31296608 | 31296877 | 31296608 | ID=cds.MS.gene003645.t1;Parent=MS.gene003645.t1 |
| chr4.1 | exon | 31296202 | 31296311 | 31296202 | ID=MS.gene003645.t1.exon3;Parent=MS.gene003645.t1 |
| chr4.1 | CDS | 31296202 | 31296311 | 31296202 | ID=cds.MS.gene003645.t1;Parent=MS.gene003645.t1 |
| chr4.1 | exon | 31295982 | 31296072 | 31295982 | ID=MS.gene003645.t1.exon4;Parent=MS.gene003645.t1 |
| chr4.1 | CDS | 31295982 | 31296072 | 31295982 | ID=cds.MS.gene003645.t1;Parent=MS.gene003645.t1 |
| chr4.1 | exon | 31295459 | 31295728 | 31295459 | ID=MS.gene003645.t1.exon5;Parent=MS.gene003645.t1 |
| chr4.1 | CDS | 31295459 | 31295728 | 31295459 | ID=cds.MS.gene003645.t1;Parent=MS.gene003645.t1 |
| chr4.1 | exon | 31295019 | 31295297 | 31295019 | ID=MS.gene003645.t1.exon6;Parent=MS.gene003645.t1 |
| chr4.1 | CDS | 31295019 | 31295297 | 31295019 | ID=cds.MS.gene003645.t1;Parent=MS.gene003645.t1 |
| Gene Sequence |
| Protein sequence |
