Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71972.t1 | XP_003608683.1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 5.80E-155 | 557 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71972.t1 | Q7XC57 | 58.5 | 325 | 117 | 8 | 1 | 320 | 1 | 312 | 2.9e-86 | 320.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71972.t1 | D5FFH1 | 97.5 | 326 | 8 | 0 | 1 | 326 | 1 | 326 | 4.2e-155 | 557.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene71972.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049236 | MS.gene71972 | 0.811537 | 6.66E-51 | -1.69E-46 |
| MS.gene053562 | MS.gene71972 | 0.820372 | 7.10E-53 | -1.69E-46 |
| MS.gene054486 | MS.gene71972 | -0.809615 | 1.73E-50 | -1.69E-46 |
| MS.gene057173 | MS.gene71972 | 0.804721 | 1.89E-49 | -1.69E-46 |
| MS.gene059540 | MS.gene71972 | 0.812788 | 3.55E-51 | -1.69E-46 |
| MS.gene059749 | MS.gene71972 | -0.827735 | 1.33E-54 | -1.69E-46 |
| MS.gene060666 | MS.gene71972 | -0.81551 | 8.91E-52 | -1.69E-46 |
| MS.gene060837 | MS.gene71972 | -0.824743 | 6.84E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71972.t1 | MTR_4g100630 | 99.387 | 326 | 2 | 0 | 1 | 326 | 1 | 326 | 0.0 | 669 |
| MS.gene71972.t1 | MTR_2g100930 | 51.744 | 344 | 139 | 11 | 1 | 323 | 1 | 338 | 3.20e-97 | 291 |
| MS.gene71972.t1 | MTR_5g037080 | 48.768 | 203 | 65 | 5 | 1 | 183 | 3 | 186 | 2.54e-48 | 164 |
| MS.gene71972.t1 | MTR_6g092540 | 47.568 | 185 | 75 | 4 | 1 | 173 | 1 | 175 | 1.01e-45 | 157 |
| MS.gene71972.t1 | MTR_8g101650 | 48.889 | 180 | 70 | 6 | 3 | 167 | 4 | 176 | 3.85e-42 | 147 |
| MS.gene71972.t1 | MTR_4g107230 | 54.902 | 153 | 58 | 5 | 15 | 162 | 5 | 151 | 3.03e-36 | 132 |
| MS.gene71972.t1 | MTR_1g111830 | 52.800 | 125 | 43 | 2 | 49 | 173 | 93 | 201 | 2.76e-35 | 128 |
| MS.gene71972.t1 | MTR_3g104370 | 41.622 | 185 | 94 | 4 | 1 | 180 | 3 | 178 | 3.80e-34 | 125 |
| MS.gene71972.t1 | MTR_4g111975 | 58.654 | 104 | 36 | 1 | 89 | 192 | 132 | 228 | 2.16e-33 | 125 |
| MS.gene71972.t1 | MTR_3g462790 | 60.000 | 100 | 38 | 1 | 71 | 168 | 121 | 220 | 3.77e-32 | 122 |
| MS.gene71972.t1 | MTR_5g069710 | 73.239 | 71 | 19 | 0 | 89 | 159 | 126 | 196 | 5.40e-31 | 119 |
| MS.gene71972.t1 | MTR_7g067080 | 66.667 | 81 | 27 | 0 | 87 | 167 | 132 | 212 | 6.15e-31 | 119 |
| MS.gene71972.t1 | MTR_5g081860 | 64.198 | 81 | 27 | 1 | 90 | 168 | 120 | 200 | 9.66e-28 | 109 |
| MS.gene71972.t1 | MTR_0036s0260 | 67.647 | 68 | 22 | 0 | 95 | 162 | 28 | 95 | 1.60e-27 | 107 |
| MS.gene71972.t1 | MTR_2g090305 | 66.176 | 68 | 23 | 0 | 95 | 162 | 28 | 95 | 1.59e-25 | 101 |
| MS.gene71972.t1 | MTR_8g063600 | 60.256 | 78 | 29 | 1 | 84 | 159 | 95 | 172 | 6.19e-25 | 102 |
| MS.gene71972.t1 | MTR_5g027570 | 36.111 | 144 | 86 | 3 | 47 | 184 | 42 | 185 | 7.84e-23 | 95.1 |
| MS.gene71972.t1 | MTR_5g088010 | 40.678 | 118 | 58 | 4 | 47 | 158 | 15 | 126 | 3.15e-20 | 88.6 |
| MS.gene71972.t1 | MTR_4g015130 | 57.812 | 64 | 27 | 0 | 105 | 168 | 3 | 66 | 1.32e-19 | 82.4 |
| MS.gene71972.t1 | MTR_8g063870 | 47.059 | 85 | 37 | 2 | 92 | 168 | 83 | 167 | 2.43e-18 | 84.0 |
| MS.gene71972.t1 | MTR_5g088060 | 41.379 | 116 | 55 | 5 | 47 | 158 | 232 | 338 | 3.56e-18 | 85.1 |
| MS.gene71972.t1 | MTR_5g488160 | 41.379 | 116 | 55 | 5 | 47 | 158 | 232 | 338 | 3.56e-18 | 85.1 |
| MS.gene71972.t1 | MTR_1g048660 | 47.059 | 68 | 36 | 0 | 96 | 163 | 13 | 80 | 3.92e-18 | 78.6 |
| MS.gene71972.t1 | MTR_5g027550 | 47.368 | 76 | 39 | 1 | 68 | 142 | 49 | 124 | 4.32e-18 | 82.0 |
| MS.gene71972.t1 | MTR_1g033620 | 59.322 | 59 | 24 | 0 | 110 | 168 | 20 | 78 | 1.59e-17 | 80.9 |
| MS.gene71972.t1 | MTR_1g083180 | 36.719 | 128 | 65 | 5 | 43 | 157 | 1 | 125 | 3.56e-15 | 73.2 |
| MS.gene71972.t1 | MTR_5g075760 | 39.583 | 96 | 43 | 4 | 76 | 157 | 75 | 169 | 2.99e-12 | 65.5 |
| MS.gene71972.t1 | MTR_3g070110 | 35.088 | 114 | 62 | 3 | 97 | 201 | 97 | 207 | 2.87e-11 | 62.8 |
| MS.gene71972.t1 | MTR_8g072990 | 28.244 | 131 | 89 | 2 | 92 | 220 | 97 | 224 | 6.42e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71972.t1 | AT5G47390 | 63.277 | 354 | 95 | 10 | 1 | 321 | 1 | 352 | 1.52e-135 | 389 |
| MS.gene71972.t1 | AT3G16350 | 45.288 | 382 | 131 | 15 | 1 | 318 | 1 | 368 | 4.59e-71 | 226 |
| MS.gene71972.t1 | AT5G61620 | 50.267 | 187 | 71 | 5 | 1 | 173 | 8 | 186 | 1.47e-49 | 168 |
| MS.gene71972.t1 | AT1G70000 | 50.244 | 205 | 59 | 7 | 1 | 185 | 1 | 182 | 2.32e-48 | 163 |
| MS.gene71972.t1 | AT1G70000 | 50.244 | 205 | 59 | 7 | 1 | 185 | 1 | 182 | 2.32e-48 | 163 |
| MS.gene71972.t1 | AT5G56840 | 44.751 | 181 | 57 | 6 | 1 | 161 | 1 | 158 | 2.75e-39 | 139 |
| MS.gene71972.t1 | AT2G38090 | 71.795 | 78 | 22 | 0 | 90 | 167 | 136 | 213 | 2.45e-33 | 125 |
| MS.gene71972.t1 | AT1G74840 | 52.667 | 150 | 55 | 5 | 21 | 162 | 22 | 163 | 4.61e-33 | 122 |
| MS.gene71972.t1 | AT1G19000 | 45.128 | 195 | 89 | 4 | 5 | 191 | 4 | 188 | 5.81e-33 | 123 |
| MS.gene71972.t1 | AT1G19000 | 45.128 | 195 | 89 | 4 | 5 | 191 | 4 | 188 | 5.81e-33 | 123 |
| MS.gene71972.t1 | AT1G74840 | 52.667 | 150 | 55 | 5 | 21 | 162 | 22 | 163 | 7.58e-33 | 122 |
| MS.gene71972.t1 | AT5G08520 | 52.336 | 107 | 51 | 0 | 62 | 168 | 85 | 191 | 8.55e-33 | 123 |
| MS.gene71972.t1 | AT1G49010 | 68.293 | 82 | 24 | 1 | 89 | 168 | 128 | 209 | 1.12e-32 | 123 |
| MS.gene71972.t1 | AT5G04760 | 62.195 | 82 | 31 | 0 | 83 | 164 | 87 | 168 | 1.20e-31 | 118 |
| MS.gene71972.t1 | AT5G58900 | 72.857 | 70 | 19 | 0 | 90 | 159 | 136 | 205 | 5.22e-31 | 118 |
| MS.gene71972.t1 | AT3G11280 | 55.000 | 100 | 45 | 0 | 60 | 159 | 92 | 191 | 8.34e-29 | 112 |
| MS.gene71972.t1 | AT3G11280 | 55.000 | 100 | 45 | 0 | 60 | 159 | 92 | 191 | 8.34e-29 | 112 |
| MS.gene71972.t1 | AT5G01200 | 63.636 | 77 | 28 | 0 | 89 | 165 | 140 | 216 | 3.31e-28 | 110 |
| MS.gene71972.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 83 | 159 | 119 | 195 | 1.23e-26 | 106 |
| MS.gene71972.t1 | AT5G05790 | 63.636 | 77 | 28 | 0 | 83 | 159 | 119 | 195 | 1.23e-26 | 106 |
| MS.gene71972.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 68 | 169 | 68 | 167 | 7.97e-24 | 98.6 |
| MS.gene71972.t1 | AT3G10580 | 48.039 | 102 | 51 | 1 | 68 | 169 | 68 | 167 | 1.27e-23 | 98.6 |
| MS.gene71972.t1 | AT4G09450 | 48.515 | 101 | 46 | 2 | 75 | 169 | 68 | 168 | 6.03e-22 | 92.0 |
| MS.gene71972.t1 | AT5G23650 | 51.948 | 77 | 37 | 0 | 83 | 159 | 108 | 184 | 1.51e-20 | 90.9 |
| MS.gene71972.t1 | AT3G10590 | 48.276 | 87 | 41 | 3 | 79 | 162 | 92 | 177 | 3.49e-18 | 82.0 |
Find 102 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTCATGTGTTTCTTTCTT+AGG | 0.230059 | 8.3:+20730661 | None:intergenic |
| ATCGACATTGATTGGGCTCT+TGG | 0.306199 | 8.3:+20730615 | None:intergenic |
| GATCCGGAAAAGTGCTAGTA+TGG | 0.310152 | 8.3:-20733273 | MS.gene71972:CDS |
| CATTGATGTCGGGCTTTAAT+GGG | 0.332518 | 8.3:+20730782 | None:intergenic |
| GCATTGATGTCGGGCTTTAA+TGG | 0.338606 | 8.3:+20730781 | None:intergenic |
| AACAGCTTCACACCACGATT+TGG | 0.346847 | 8.3:+20733317 | None:intergenic |
| ATTGGGCTCTTGGAATGTAC+TGG | 0.350663 | 8.3:+20730625 | None:intergenic |
| ACGAGTTCATCGACATTGAT+TGG | 0.357821 | 8.3:+20730607 | None:intergenic |
| CACTATAGCGGGTCCGGGTC+TGG | 0.363851 | 8.3:-20733239 | MS.gene71972:CDS |
| GGTGAAACTATTGGTGATAC+TGG | 0.369014 | 8.3:-20730562 | MS.gene71972:CDS |
| TTTCCTCTTCCATATTGGTC+TGG | 0.369873 | 8.3:-20730703 | MS.gene71972:CDS |
| TGTGTTTCTTTCTTAGGAGC+TGG | 0.373891 | 8.3:+20730667 | None:intergenic |
| CCTTGATATAACATAGTTCC+TGG | 0.379937 | 8.3:+20731770 | None:intergenic |
| CTTAGCCACTATAGCGGGTC+CGG | 0.398806 | 8.3:-20733245 | MS.gene71972:CDS |
| GATCATGGTGCTGATGGTTA+TGG | 0.418054 | 8.3:-20733167 | MS.gene71972:CDS |
| TAACCATCAGCACCATGATC+AGG | 0.421312 | 8.3:+20733170 | None:intergenic |
| CTCTTGGAATGTACTGGGGT+TGG | 0.426876 | 8.3:+20730631 | None:intergenic |
| TTCATACAACTCCAGCTTGT+GGG | 0.433206 | 8.3:-20730483 | MS.gene71972:CDS |
| TTGGGCTCTTGGAATGTACT+GGG | 0.435041 | 8.3:+20730626 | None:intergenic |
| GGAAGAGGAAAAGGGAAGAA+TGG | 0.436557 | 8.3:+20730715 | None:intergenic |
| GACCAATATGGAAGAGGAAA+AGG | 0.441108 | 8.3:+20730706 | None:intergenic |
| TGCGGTACCATTGAAGTATC+AGG | 0.442348 | 8.3:+20730937 | None:intergenic |
| CTGAGTTTAGGTGAAACTAT+TGG | 0.449826 | 8.3:-20730571 | MS.gene71972:CDS |
| GCAGGCACCTGATACTTCAA+TGG | 0.455907 | 8.3:-20730944 | MS.gene71972:intron |
| GACGCTTGTGCATTGATGTC+GGG | 0.457053 | 8.3:+20730772 | None:intergenic |
| GGACTGTATCCAGACCAATA+TGG | 0.463662 | 8.3:+20730694 | None:intergenic |
| AATCGTGGTGTGAAGCTGTT+TGG | 0.464828 | 8.3:-20733314 | MS.gene71972:CDS |
| CGAGTTCATCGACATTGATT+GGG | 0.465415 | 8.3:+20730608 | None:intergenic |
| CATCTGCAACAATATCAAAC+AGG | 0.473584 | 8.3:+20731667 | None:intergenic |
| TGCACAAGCGTCGGCTTACC+CGG | 0.477679 | 8.3:-20730761 | MS.gene71972:CDS |
| TGAAAAGCCGACTGTCTAGA+AGG | 0.477844 | 8.3:+20730502 | None:intergenic |
| ACAAGCTGGGCAAAGGTGAT+TGG | 0.481462 | 8.3:-20731803 | MS.gene71972:CDS |
| GTTCTCATTGCAGCCACAAT+GGG | 0.482827 | 8.3:-20733358 | MS.gene71972:CDS |
| TCATCGAGTGGAGGAGGAGC+AGG | 0.484781 | 8.3:+20730859 | None:intergenic |
| CTATGTTCCTCCTCAGTCCA+TGG | 0.485937 | 8.3:+20731846 | None:intergenic |
| GGCATGTCAAAACTGAGTTT+AGG | 0.490022 | 8.3:-20730583 | MS.gene71972:CDS |
| TAAGATTAACCGATGGGATC+CGG | 0.490318 | 8.3:-20733289 | MS.gene71972:CDS |
| TCTTTCTTAGGAGCTGGCTC+AGG | 0.491218 | 8.3:+20730673 | None:intergenic |
| AAGAATGGAGAATAATATGC+TGG | 0.499540 | 8.3:+20730730 | None:intergenic |
| GTTTGAGTTTGTAGAATCCA+TGG | 0.503591 | 8.3:+20730825 | None:intergenic |
| CGACGCTTGTGCATTGATGT+CGG | 0.504753 | 8.3:+20730771 | None:intergenic |
| GTGATTGGCGTGGAATTGCC+AGG | 0.506530 | 8.3:-20731788 | MS.gene71972:CDS |
| CAGACCCGGACCCGCTATAG+TGG | 0.508114 | 8.3:+20733240 | None:intergenic |
| CACAGAACAGTCCCACAAGC+TGG | 0.510753 | 8.3:+20730472 | None:intergenic |
| TTACTTGGATTGAACAAGCT+GGG | 0.512315 | 8.3:-20731816 | MS.gene71972:CDS |
| CATTCTTCATCGAGTGGAGG+AGG | 0.516097 | 8.3:+20730853 | None:intergenic |
| ACCAATATGGAAGAGGAAAA+GGG | 0.517539 | 8.3:+20730707 | None:intergenic |
| CCAGGAACTATGTTATATCA+AGG | 0.521846 | 8.3:-20731770 | MS.gene71972:CDS |
| AGTGGAGGAGGAGCAGGCAA+AGG | 0.525729 | 8.3:+20730865 | None:intergenic |
| TTTACTTGGATTGAACAAGC+TGG | 0.526943 | 8.3:-20731817 | MS.gene71972:CDS |
| TCAAATACTCCTGGTTCACC+TGG | 0.529002 | 8.3:-20733200 | MS.gene71972:CDS |
| TAAGAAAGAAACACATGAAG+TGG | 0.531198 | 8.3:-20730659 | MS.gene71972:CDS |
| TAATATGCTGGATATACTAC+CGG | 0.533057 | 8.3:+20730742 | None:intergenic |
| CGATGAAGAATGTGAGTCCA+TGG | 0.537872 | 8.3:-20730842 | MS.gene71972:CDS |
| GTGGAGGAGGAGCAGGCAAA+GGG | 0.545011 | 8.3:+20730866 | None:intergenic |
| AACCCTGATCATGGTGCTGA+TGG | 0.553194 | 8.3:-20733173 | MS.gene71972:CDS |
| GTCGGGCTTTAATGGGGCAG+AGG | 0.557337 | 8.3:+20730789 | None:intergenic |
| TGCAACAATATCAAACAGGC+TGG | 0.557484 | 8.3:+20731671 | None:intergenic |
| TGTTCTCATTGCAGCCACAA+TGG | 0.558526 | 8.3:-20733359 | MS.gene71972:CDS |
| GGTAATCTTAGCCACTATAG+CGG | 0.560908 | 8.3:-20733251 | MS.gene71972:CDS |
| TCTCGTAAACTACTTGAAGA+AGG | 0.563354 | 8.3:-20730526 | MS.gene71972:CDS |
| GATTCTACAAACTCAAACGA+TGG | 0.564664 | 8.3:-20730820 | MS.gene71972:CDS |
| TATCCAGACCAATATGGAAG+AGG | 0.565662 | 8.3:+20730700 | None:intergenic |
| TTAGCCACTATAGCGGGTCC+GGG | 0.567360 | 8.3:-20733244 | MS.gene71972:CDS |
| TTTCATACAACTCCAGCTTG+TGG | 0.570031 | 8.3:-20730484 | MS.gene71972:CDS |
| AGTTTACGAGACAGAGTCGA+GGG | 0.572728 | 8.3:+20730538 | None:intergenic |
| TCAGGCAAAGCAATGTGTCT+AGG | 0.575738 | 8.3:-20731707 | MS.gene71972:CDS |
| AATACCGGGTCAAATACTCC+TGG | 0.575888 | 8.3:-20733209 | MS.gene71972:CDS |
| TTGGAGTAAGATTAACCGAT+GGG | 0.581339 | 8.3:-20733295 | MS.gene71972:CDS |
| TGCTGATGGTTATGGTTCTG+AGG | 0.588306 | 8.3:-20733159 | MS.gene71972:CDS |
| GGATTGAACAAGCTGGGCAA+AGG | 0.588333 | 8.3:-20731810 | MS.gene71972:CDS |
| AACCATCAGCACCATGATCA+GGG | 0.589650 | 8.3:+20733171 | None:intergenic |
| CCTGGTGAAAACCCTGATCA+TGG | 0.590290 | 8.3:-20733182 | MS.gene71972:CDS |
| GTAATCTTAGCCACTATAGC+GGG | 0.591144 | 8.3:-20733250 | MS.gene71972:CDS |
| CGGGAAGTAGAAGAAGAACC+AGG | 0.591204 | 8.3:+20733128 | None:intergenic |
| ATCAATGTCGATGAACTCGT+TGG | 0.598709 | 8.3:-20730604 | MS.gene71972:CDS |
| GACTCACATTCTTCATCGAG+TGG | 0.599669 | 8.3:+20730847 | None:intergenic |
| AGAAGGTCCTTCTAGACAGT+CGG | 0.599702 | 8.3:-20730509 | MS.gene71972:CDS |
| CAACTACAAACTGAAACAGA+AGG | 0.603118 | 8.3:-20730895 | MS.gene71972:CDS |
| ATTGATGTCGGGCTTTAATG+GGG | 0.617600 | 8.3:+20730783 | None:intergenic |
| ATCCGGAAAAGTGCTAGTAT+GGG | 0.617740 | 8.3:-20733272 | MS.gene71972:CDS |
| TTCTTGAGTTGTGCCCATTG+TGG | 0.619382 | 8.3:+20733345 | None:intergenic |
| ATCAAGGACACCTACTCAAG+TGG | 0.620432 | 8.3:-20731754 | MS.gene71972:CDS |
| GCTGCAATGAGAACAACGAC+GGG | 0.624049 | 8.3:+20733367 | None:intergenic |
| CGACATCAATGCACAAGCGT+CGG | 0.624911 | 8.3:-20730770 | MS.gene71972:CDS |
| CTGGGCAAAGGTGATTGGCG+TGG | 0.626265 | 8.3:-20731798 | MS.gene71972:CDS |
| TTTGGAGTAAGATTAACCGA+TGG | 0.628079 | 8.3:-20733296 | MS.gene71972:CDS |
| ATGTGTCTAGGCGGAAGAGA+CGG | 0.634804 | 8.3:-20731695 | MS.gene71972:CDS |
| AATATGCTGGATATACTACC+GGG | 0.636844 | 8.3:+20730743 | None:intergenic |
| TGGGCTCTTGGAATGTACTG+GGG | 0.642523 | 8.3:+20730627 | None:intergenic |
| GCGTGACTGGCCACTTGAGT+AGG | 0.645270 | 8.3:+20731744 | None:intergenic |
| GGCTGCAATGAGAACAACGA+CGG | 0.647502 | 8.3:+20733366 | None:intergenic |
| TTAGCTGACAAGAAGTCTTG+CGG | 0.653600 | 8.3:+20730919 | None:intergenic |
| TGCAGGCACTCCATGGACTG+AGG | 0.655185 | 8.3:-20731856 | MS.gene71972:intron |
| GGTATTCAAAAGTCCAGACC+CGG | 0.655952 | 8.3:+20733226 | None:intergenic |
| TCAAGAACTTGTCCAAATCG+TGG | 0.664250 | 8.3:-20733329 | MS.gene71972:CDS |
| TAGTTTACGAGACAGAGTCG+AGG | 0.668337 | 8.3:+20730537 | None:intergenic |
| TCACATTCTTCATCGAGTGG+AGG | 0.671641 | 8.3:+20730850 | None:intergenic |
| AGGCACTCCATGGACTGAGG+AGG | 0.685831 | 8.3:-20731853 | MS.gene71972:CDS |
| GGCAAAGCAATGTGTCTAGG+CGG | 0.687559 | 8.3:-20731704 | MS.gene71972:CDS |
| TGAACCAGGAGTATTTGACC+CGG | 0.708436 | 8.3:+20733205 | None:intergenic |
| GTTTACGAGACAGAGTCGAG+GGG | 0.738520 | 8.3:+20730539 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAAAAAACACATT+TGG | + | chr8.3:20732317-20732336 | None:intergenic | 10.0% |
| !!! | ATTTTTAATATTTTATTTGC+AGG | - | chr8.3:20731969-20731988 | MS.gene71972:intron | 10.0% |
| !!! | GAAAAAGTATTAAAAAAAAA+CGG | + | chr8.3:20732647-20732666 | None:intergenic | 10.0% |
| !! | ATTATTATGTTTGTTTAACT+TGG | - | chr8.3:20731124-20731143 | MS.gene71972:intron | 15.0% |
| !!! | AAATATCATTTAAAGCAAAA+AGG | + | chr8.3:20731730-20731749 | None:intergenic | 15.0% |
| !!! | TTATATTTTTGATTTTTGGT+TGG | - | chr8.3:20730917-20730936 | MS.gene71972:CDS | 15.0% |
| !! | ATATAGAATTTGGAAATAAG+GGG | + | chr8.3:20732209-20732228 | None:intergenic | 20.0% |
| !! | ATTTGGATAATCTTATCAAA+TGG | + | chr8.3:20732300-20732319 | None:intergenic | 20.0% |
| !! | CATATAGAATTTGGAAATAA+GGG | + | chr8.3:20732210-20732229 | None:intergenic | 20.0% |
| !! | TAAAACATTGGTATTTAGTT+TGG | - | chr8.3:20732749-20732768 | MS.gene71972:intron | 20.0% |
| !! | TTATATGCAACATAATGTAA+AGG | + | chr8.3:20732247-20732266 | None:intergenic | 20.0% |
| !! | TTTGAATTCAATTATATAGC+TGG | - | chr8.3:20732586-20732605 | MS.gene71972:intron | 20.0% |
| !!! | AATATGCTCTTTTAACTATA+TGG | - | chr8.3:20731368-20731387 | MS.gene71972:intron | 20.0% |
| !!! | AATGTTAGGTATACTTTTTT+GGG | - | chr8.3:20731806-20731825 | MS.gene71972:CDS | 20.0% |
| !!! | ATCTGAAATATATTGAATGT+TGG | - | chr8.3:20731032-20731051 | MS.gene71972:intron | 20.0% |
| !!! | CATTTTAAGCATATAGAATT+TGG | + | chr8.3:20732219-20732238 | None:intergenic | 20.0% |
| !!! | TAATGTTAGGTATACTTTTT+TGG | - | chr8.3:20731805-20731824 | MS.gene71972:CDS | 20.0% |
| !!! | TATTTTTGTTTTGATTTTGC+AGG | - | chr8.3:20732880-20732899 | MS.gene71972:intron | 20.0% |
| !!! | TTTGCTTTAAATGATATTTG+TGG | - | chr8.3:20731731-20731750 | MS.gene71972:CDS | 20.0% |
| ! | AACATTATTAATACACAGAG+AGG | + | chr8.3:20732457-20732476 | None:intergenic | 25.0% |
| ! | ATCAAATTAGTGAGAAATAC+GGG | + | chr8.3:20732714-20732733 | None:intergenic | 25.0% |
| ! | ATTTCTCACTAATTTGATGT+CGG | - | chr8.3:20732716-20732735 | MS.gene71972:intron | 25.0% |
| ! | CATCAAATTAGTGAGAAATA+CGG | + | chr8.3:20732715-20732734 | None:intergenic | 25.0% |
| ! | CTAGATGAATTCAAGTATAT+TGG | - | chr8.3:20730836-20730855 | MS.gene71972:CDS | 25.0% |
| ! | GCATATAGAATTTGGAAATA+AGG | + | chr8.3:20732211-20732230 | None:intergenic | 25.0% |
| ! | GTCTATGATAGATTAAATAC+CGG | - | chr8.3:20731277-20731296 | MS.gene71972:intron | 25.0% |
| ! | GTGAACTATATGCATATTAA+TGG | + | chr8.3:20731191-20731210 | None:intergenic | 25.0% |
| ! | GTTAGATATTGATAGAAACA+TGG | - | chr8.3:20732480-20732499 | MS.gene71972:intron | 25.0% |
| ! | TAAATTATGTGATCTTGGTT+TGG | - | chr8.3:20730860-20730879 | MS.gene71972:CDS | 25.0% |
| ! | TCTATGATAGATTAAATACC+GGG | - | chr8.3:20731278-20731297 | MS.gene71972:intron | 25.0% |
| ! | TCTGTGTATTAATAATGTTC+TGG | - | chr8.3:20732458-20732477 | MS.gene71972:intron | 25.0% |
| ! | TTCAAATAGTCACTAATGTT+AGG | - | chr8.3:20731792-20731811 | MS.gene71972:CDS | 25.0% |
| ! | TTGGATAAATTATGTGATCT+TGG | - | chr8.3:20730855-20730874 | MS.gene71972:CDS | 25.0% |
| !! | ATGATATTGTTTGACCTTTT+AGG | - | chr8.3:20732335-20732354 | MS.gene71972:intron | 25.0% |
| !! | ATTTTCAAAGAATCCCTAAA+AGG | + | chr8.3:20732352-20732371 | None:intergenic | 25.0% |
| !! | TGATATTGTTTGACCTTTTA+GGG | - | chr8.3:20732336-20732355 | MS.gene71972:intron | 25.0% |
| !! | TTAAATGAGTCAAAGGTTTT+AGG | + | chr8.3:20731834-20731853 | None:intergenic | 25.0% |
| !! | TTCTGAACCTTCTAATTTTT+CGG | - | chr8.3:20732848-20732867 | MS.gene71972:intron | 25.0% |
| !!! | ATGTTAGGTATACTTTTTTG+GGG | - | chr8.3:20731807-20731826 | MS.gene71972:CDS | 25.0% |
| !!! | GAACATAGAATGTTTTTACT+TGG | - | chr8.3:20732011-20732030 | MS.gene71972:intron | 25.0% |
| !!! | GTCTTTTTTGAGAGAATTAT+TGG | - | chr8.3:20731001-20731020 | MS.gene71972:intron | 25.0% |
| AACCTAGTTAAATGAGTCAA+AGG | + | chr8.3:20731841-20731860 | None:intergenic | 30.0% | |
| AACCTTTGACTCATTTAACT+AGG | - | chr8.3:20731836-20731855 | MS.gene71972:CDS | 30.0% | |
| AAGAATGGAGAATAATATGC+TGG | + | chr8.3:20733115-20733134 | None:intergenic | 30.0% | |
| AATTCAATTATATAGCTGGC+TGG | - | chr8.3:20732590-20732609 | MS.gene71972:intron | 30.0% | |
| AATTGAATTCAAACCAACCA+GGG | + | chr8.3:20732579-20732598 | None:intergenic | 30.0% | |
| ACGCTCAAAAATATTTCATC+AGG | - | chr8.3:20732117-20732136 | MS.gene71972:intron | 30.0% | |
| ACTTCATGTGTTTCTTTCTT+AGG | + | chr8.3:20733184-20733203 | None:intergenic | 30.0% | |
| AGAAATCCCGAAAAATTAGA+AGG | + | chr8.3:20732858-20732877 | None:intergenic | 30.0% | |
| ATCATGACTGAAACAATCTT+TGG | - | chr8.3:20731447-20731466 | MS.gene71972:intron | 30.0% | |
| GAAAAATTAGAAGGTTCAGA+AGG | + | chr8.3:20732849-20732868 | None:intergenic | 30.0% | |
| GTATTCTAGTGCCTAATTAT+GGG | - | chr8.3:20731156-20731175 | MS.gene71972:intron | 30.0% | |
| TAAGAAAGAAACACATGAAG+TGG | - | chr8.3:20733183-20733202 | MS.gene71972:CDS | 30.0% | |
| TAATATGCTGGATATACTAC+CGG | + | chr8.3:20733103-20733122 | None:intergenic | 30.0% | |
| TAATTGAATTCAAACCAACC+AGG | + | chr8.3:20732580-20732599 | None:intergenic | 30.0% | |
| TATTCTAGTGCCTAATTATG+GGG | - | chr8.3:20731157-20731176 | MS.gene71972:intron | 30.0% | |
| TGACTCATTTAACTAGGTTT+CGG | - | chr8.3:20731842-20731861 | MS.gene71972:CDS | 30.0% | |
| TGTATTCTAGTGCCTAATTA+TGG | - | chr8.3:20731155-20731174 | MS.gene71972:intron | 30.0% | |
| TTTCTCACTAATTTGATGTC+GGG | - | chr8.3:20732717-20732736 | MS.gene71972:intron | 30.0% | |
| TTTGCTTGCATGTGAATTAT+TGG | - | chr8.3:20730786-20730805 | MS.gene71972:CDS | 30.0% | |
| ! | AAACATTGCATTTTCTGATG+TGG | - | chr8.3:20732777-20732796 | MS.gene71972:intron | 30.0% |
| ! | AAATGGACAATTTTCCCAAA+TGG | + | chr8.3:20732410-20732429 | None:intergenic | 30.0% |
| ! | CTTATCAAATGGTAATGAAC+AGG | + | chr8.3:20732289-20732308 | None:intergenic | 30.0% |
| ! | GTCTATCTAAAGTTTGATCT+AGG | + | chr8.3:20731708-20731727 | None:intergenic | 30.0% |
| ! | TCTGAACCTTCTAATTTTTC+GGG | - | chr8.3:20732849-20732868 | MS.gene71972:intron | 30.0% |
| ! | TGCACAGAGTATTAGATTTA+GGG | + | chr8.3:20731648-20731667 | None:intergenic | 30.0% |
| ! | TTGAATGTTGGTCTAAGAAA+TGG | - | chr8.3:20731044-20731063 | MS.gene71972:intron | 30.0% |
| ! | TTGCACAGAGTATTAGATTT+AGG | + | chr8.3:20731649-20731668 | None:intergenic | 30.0% |
| !! | AACATTGGTATTTAGTTTGG+AGG | - | chr8.3:20732752-20732771 | MS.gene71972:intron | 30.0% |
| !! | GCTCTTTTAACTATATGGTT+CGG | - | chr8.3:20731373-20731392 | MS.gene71972:intron | 30.0% |
| !!! | AACATTGTTTTTGAACCACA+TGG | + | chr8.3:20731088-20731107 | None:intergenic | 30.0% |
| !!! | ACAAACCCTTTTTTCTTTCA+CGG | + | chr8.3:20730737-20730756 | None:intergenic | 30.0% |
| !!! | GGGACTGATTTTTAAAACAT+TGG | - | chr8.3:20732737-20732756 | MS.gene71972:intron | 30.0% |
| !!! | TGTTAGGTATACTTTTTTGG+GGG | - | chr8.3:20731808-20731827 | MS.gene71972:CDS | 30.0% |
| !!! | TTTGGCAATGTTTTAATAGC+CGG | - | chr8.3:20732513-20732532 | MS.gene71972:intron | 30.0% |
| !!! | TTTTTGGTTGGTGTAATTGT+AGG | - | chr8.3:20730929-20730948 | MS.gene71972:CDS | 30.0% |
| AAGAAATGTGACCCTATTCA+GGG | + | chr8.3:20731596-20731615 | None:intergenic | 35.0% | |
| AATATGCTGGATATACTACC+GGG | + | chr8.3:20733102-20733121 | None:intergenic | 35.0% | |
| AATGGATAGGTATAAGTCTC+AGG | - | chr8.3:20731062-20731081 | MS.gene71972:intron | 35.0% | |
| AATTCACATGCAAGCAAAAG+AGG | + | chr8.3:20730784-20730803 | None:intergenic | 35.0% | |
| ACATTACAGTCAGCTTCAAT+GGG | - | chr8.3:20731906-20731925 | MS.gene71972:intron | 35.0% | |
| ACATTTCTTAAACGACGACA+TGG | - | chr8.3:20731607-20731626 | MS.gene71972:intron | 35.0% | |
| ACCAATATGGAAGAGGAAAA+GGG | + | chr8.3:20733138-20733157 | None:intergenic | 35.0% | |
| ACCTGGACAAAAATAAAGCT+TGG | + | chr8.3:20731473-20731492 | None:intergenic | 35.0% | |
| ACTTCCCGTGAAAGAAAAAA+GGG | - | chr8.3:20730729-20730748 | MS.gene71972:CDS | 35.0% | |
| ATTACACACAACCCTGAATA+GGG | - | chr8.3:20731582-20731601 | MS.gene71972:intron | 35.0% | |
| ATTCTAGTGCCTAATTATGG+GGG | - | chr8.3:20731158-20731177 | MS.gene71972:intron | 35.0% | |
| ATTGATAGAAACATGGCTCT+GGG | - | chr8.3:20732487-20732506 | MS.gene71972:intron | 35.0% | |
| CAAATTCAGCTAAACAGTAC+TGG | + | chr8.3:20731869-20731888 | None:intergenic | 35.0% | |
| CAACTACAAACTGAAACAGA+AGG | - | chr8.3:20732947-20732966 | MS.gene71972:intron | 35.0% | |
| CATCAACATCCAAAATATCC+AGG | + | chr8.3:20732433-20732452 | None:intergenic | 35.0% | |
| CATCCAAAATATCCAGGAAA+TGG | + | chr8.3:20732427-20732446 | None:intergenic | 35.0% | |
| CATCTGCAACAATATCAAAC+AGG | + | chr8.3:20732178-20732197 | None:intergenic | 35.0% | |
| CCAGGAACTATGTTATATCA+AGG | - | chr8.3:20732072-20732091 | MS.gene71972:intron | 35.0% | |
| CCTTGATATAACATAGTTCC+TGG | + | chr8.3:20732075-20732094 | None:intergenic | 35.0% | |
| CTGAGTTTAGGTGAAACTAT+TGG | - | chr8.3:20733271-20733290 | MS.gene71972:CDS | 35.0% | |
| CTGTTTCAGCTATCTAAACT+AGG | - | chr8.3:20731210-20731229 | MS.gene71972:intron | 35.0% | |
| GATTCTACAAACTCAAACGA+TGG | - | chr8.3:20733022-20733041 | MS.gene71972:intron | 35.0% | |
| GGTTCAAGACACAGAAAAAA+TGG | - | chr8.3:20731526-20731545 | MS.gene71972:intron | 35.0% | |
| TAAGAAATGTGACCCTATTC+AGG | + | chr8.3:20731597-20731616 | None:intergenic | 35.0% | |
| TACTTCCCGTGAAAGAAAAA+AGG | - | chr8.3:20730728-20730747 | MS.gene71972:CDS | 35.0% | |
| TAGGAGTAACTAGACAAGAA+AGG | - | chr8.3:20730948-20730967 | MS.gene71972:intron | 35.0% | |
| TATTGATAGAAACATGGCTC+TGG | - | chr8.3:20732486-20732505 | MS.gene71972:intron | 35.0% | |
| TCTCGTAAACTACTTGAAGA+AGG | - | chr8.3:20733316-20733335 | MS.gene71972:CDS | 35.0% | |
| TTACTTGGATTGAACAAGCT+GGG | - | chr8.3:20732026-20732045 | MS.gene71972:intron | 35.0% | |
| TTAGAAGGTTCAGAAGGAAA+AGG | + | chr8.3:20732843-20732862 | None:intergenic | 35.0% | |
| TTGGAGTAAGATTAACCGAT+GGG | - | chr8.3:20730547-20730566 | MS.gene71972:CDS | 35.0% | |
| TTTACTTGGATTGAACAAGC+TGG | - | chr8.3:20732025-20732044 | MS.gene71972:intron | 35.0% | |
| ! | ATGGTAATGAACAGGTTATG+TGG | + | chr8.3:20732281-20732300 | None:intergenic | 35.0% |
| ! | GCACAGAGTATTAGATTTAG+GGG | + | chr8.3:20731647-20731666 | None:intergenic | 35.0% |
| ! | GTTTGAGTTTGTAGAATCCA+TGG | + | chr8.3:20733020-20733039 | None:intergenic | 35.0% |
| ! | TGTCCATTTCCTGGATATTT+TGG | - | chr8.3:20732421-20732440 | MS.gene71972:intron | 35.0% |
| ! | TGTTGGTCTAAGAAATGGAT+AGG | - | chr8.3:20731049-20731068 | MS.gene71972:intron | 35.0% |
| ! | TTTGGAGTAAGATTAACCGA+TGG | - | chr8.3:20730546-20730565 | MS.gene71972:CDS | 35.0% |
| ! | TTTTCTGTGTCTTGAACCTT+CGG | + | chr8.3:20731524-20731543 | None:intergenic | 35.0% |
| !! | GAAATATTTTTGAGCGTGAC+TGG | + | chr8.3:20732114-20732133 | None:intergenic | 35.0% |
| !! | TATGTGATCTTGGTTTGGAT+TGG | - | chr8.3:20730865-20730884 | MS.gene71972:CDS | 35.0% |
| !!! | CAAACCCTTTTTTCTTTCAC+GGG | + | chr8.3:20730736-20730755 | None:intergenic | 35.0% |
| ACGAGTTCATCGACATTGAT+TGG | + | chr8.3:20733238-20733257 | None:intergenic | 40.0% | |
| ATAGATTAAATACCGGGCTG+TGG | - | chr8.3:20731284-20731303 | MS.gene71972:intron | 40.0% | |
| ATCAATGTCGATGAACTCGT+TGG | - | chr8.3:20733238-20733257 | MS.gene71972:CDS | 40.0% | |
| CAATGCTTGCAGATCATTAG+GGG | + | chr8.3:20731344-20731363 | None:intergenic | 40.0% | |
| CACATTACAGTCAGCTTCAA+TGG | - | chr8.3:20731905-20731924 | MS.gene71972:intron | 40.0% | |
| CATTACAGTCAGCTTCAATG+GGG | - | chr8.3:20731907-20731926 | MS.gene71972:intron | 40.0% | |
| CCAATGCTTGCAGATCATTA+GGG | + | chr8.3:20731345-20731364 | None:intergenic | 40.0% | |
| GACCAATATGGAAGAGGAAA+AGG | + | chr8.3:20733139-20733158 | None:intergenic | 40.0% | |
| GATTACACACAACCCTGAAT+AGG | - | chr8.3:20731581-20731600 | MS.gene71972:intron | 40.0% | |
| GGCATGTCAAAACTGAGTTT+AGG | - | chr8.3:20733259-20733278 | MS.gene71972:CDS | 40.0% | |
| GGTAATCTTAGCCACTATAG+CGG | - | chr8.3:20730591-20730610 | MS.gene71972:CDS | 40.0% | |
| GTAATCTTAGCCACTATAGC+GGG | - | chr8.3:20730592-20730611 | MS.gene71972:CDS | 40.0% | |
| TAAGATTAACCGATGGGATC+CGG | - | chr8.3:20730553-20730572 | MS.gene71972:CDS | 40.0% | |
| TATCCAGACCAATATGGAAG+AGG | + | chr8.3:20733145-20733164 | None:intergenic | 40.0% | |
| TCAAGAACTTGTCCAAATCG+TGG | - | chr8.3:20730513-20730532 | MS.gene71972:CDS | 40.0% | |
| TGCAACAATATCAAACAGGC+TGG | + | chr8.3:20732174-20732193 | None:intergenic | 40.0% | |
| TGGGAAAATTGTCCATTTCC+TGG | - | chr8.3:20732412-20732431 | MS.gene71972:intron | 40.0% | |
| TGTGTTTCTTTCTTAGGAGC+TGG | + | chr8.3:20733178-20733197 | None:intergenic | 40.0% | |
| TTAGCTGACAAGAAGTCTTG+CGG | + | chr8.3:20732926-20732945 | None:intergenic | 40.0% | |
| TTAGTGAGAAATACGGGTCA+TGG | + | chr8.3:20732708-20732727 | None:intergenic | 40.0% | |
| TTCAGTCATGATTCGAACTC+TGG | + | chr8.3:20731439-20731458 | None:intergenic | 40.0% | |
| TTCATACAACTCCAGCTTGT+GGG | - | chr8.3:20733359-20733378 | MS.gene71972:CDS | 40.0% | |
| TTTCATACAACTCCAGCTTG+TGG | - | chr8.3:20733358-20733377 | MS.gene71972:CDS | 40.0% | |
| TTTCCTCTTCCATATTGGTC+TGG | - | chr8.3:20733139-20733158 | MS.gene71972:CDS | 40.0% | |
| TTTCTGTGTCTTGAACCTTC+GGG | + | chr8.3:20731523-20731542 | None:intergenic | 40.0% | |
| ! | ATTGATGTCGGGCTTTAATG+GGG | + | chr8.3:20733062-20733081 | None:intergenic | 40.0% |
| ! | CACGACACTGTTTTCCATTT+GGG | - | chr8.3:20732393-20732412 | MS.gene71972:intron | 40.0% |
| ! | CAGAGTATTAGATTTAGGGG+AGG | + | chr8.3:20731644-20731663 | None:intergenic | 40.0% |
| ! | CATTGATGTCGGGCTTTAAT+GGG | + | chr8.3:20733063-20733082 | None:intergenic | 40.0% |
| ! | CGAGTTCATCGACATTGATT+GGG | + | chr8.3:20733237-20733256 | None:intergenic | 40.0% |
| ! | GGTGAAACTATTGGTGATAC+TGG | - | chr8.3:20733280-20733299 | MS.gene71972:CDS | 40.0% |
| ! | TACCCATACTAGCACTTTTC+CGG | + | chr8.3:20730575-20730594 | None:intergenic | 40.0% |
| ! | TCACGACACTGTTTTCCATT+TGG | - | chr8.3:20732392-20732411 | MS.gene71972:intron | 40.0% |
| ! | TCCCTTTTCCTCTTCCATAT+TGG | - | chr8.3:20733134-20733153 | MS.gene71972:CDS | 40.0% |
| ! | TTGATAGAAACATGGCTCTG+GGG | - | chr8.3:20732488-20732507 | MS.gene71972:intron | 40.0% |
| !! | ATCCGGAAAAGTGCTAGTAT+GGG | - | chr8.3:20730570-20730589 | MS.gene71972:CDS | 40.0% |
| !! | TTTTATTTGCAGGCACTCCA+TGG | - | chr8.3:20731979-20731998 | MS.gene71972:intron | 40.0% |
| !!! | GCCAAGCTTTATTTTTGTCC+AGG | - | chr8.3:20731469-20731488 | MS.gene71972:intron | 40.0% |
| AAAAACGGTTGAACCAGCCA+TGG | + | chr8.3:20732632-20732651 | None:intergenic | 45.0% | |
| AAACCAACCAGGGAACTAGT+TGG | + | chr8.3:20732569-20732588 | None:intergenic | 45.0% | |
| AACAGCTTCACACCACGATT+TGG | + | chr8.3:20730528-20730547 | None:intergenic | 45.0% | |
| AACCATCAGCACCATGATCA+GGG | + | chr8.3:20730674-20730693 | None:intergenic | 45.0% | |
| AATACCGGGTCAAATACTCC+TGG | - | chr8.3:20730633-20730652 | MS.gene71972:CDS | 45.0% | |
| AATCGTGGTGTGAAGCTGTT+TGG | - | chr8.3:20730528-20730547 | MS.gene71972:CDS | 45.0% | |
| AGAAGGTCCTTCTAGACAGT+CGG | - | chr8.3:20733333-20733352 | MS.gene71972:CDS | 45.0% | |
| AGTTTACGAGACAGAGTCGA+GGG | + | chr8.3:20733307-20733326 | None:intergenic | 45.0% | |
| ATCAAGGACACCTACTCAAG+TGG | - | chr8.3:20732088-20732107 | MS.gene71972:intron | 45.0% | |
| ATCCTTCCCAAGAGTGAGTA+GGG | - | chr8.3:20731682-20731701 | MS.gene71972:CDS | 45.0% | |
| ATTGGGCTCTTGGAATGTAC+TGG | + | chr8.3:20733220-20733239 | None:intergenic | 45.0% | |
| CAGAAGGAAAAGGAAAAGCG+AGG | + | chr8.3:20732833-20732852 | None:intergenic | 45.0% | |
| CCCTAATGATCTGCAAGCAT+TGG | - | chr8.3:20731342-20731361 | MS.gene71972:intron | 45.0% | |
| CGATGAAGAATGTGAGTCCA+TGG | - | chr8.3:20733000-20733019 | MS.gene71972:intron | 45.0% | |
| GACTCACATTCTTCATCGAG+TGG | + | chr8.3:20732998-20733017 | None:intergenic | 45.0% | |
| GCCAATGCTTGCAGATCATT+AGG | + | chr8.3:20731346-20731365 | None:intergenic | 45.0% | |
| GGAAGAGGAAAAGGGAAGAA+TGG | + | chr8.3:20733130-20733149 | None:intergenic | 45.0% | |
| GGACTGTATCCAGACCAATA+TGG | + | chr8.3:20733151-20733170 | None:intergenic | 45.0% | |
| GGTATTCAAAAGTCCAGACC+CGG | + | chr8.3:20730619-20730638 | None:intergenic | 45.0% | |
| GTCAGCTTCAATGGGGATTA+CGG | - | chr8.3:20731914-20731933 | MS.gene71972:intron | 45.0% | |
| GTTCTCATTGCAGCCACAAT+GGG | - | chr8.3:20730484-20730503 | MS.gene71972:CDS | 45.0% | |
| TAACCATCAGCACCATGATC+AGG | + | chr8.3:20730675-20730694 | None:intergenic | 45.0% | |
| TACTCACTCTTGGGAAGGAT+GGG | + | chr8.3:20731682-20731701 | None:intergenic | 45.0% | |
| TAGTTTACGAGACAGAGTCG+AGG | + | chr8.3:20733308-20733327 | None:intergenic | 45.0% | |
| TCAAATACTCCTGGTTCACC+TGG | - | chr8.3:20730642-20730661 | MS.gene71972:CDS | 45.0% | |
| TCACATTCTTCATCGAGTGG+AGG | + | chr8.3:20732995-20733014 | None:intergenic | 45.0% | |
| TCAGGCAAAGCAATGTGTCT+AGG | - | chr8.3:20732135-20732154 | MS.gene71972:intron | 45.0% | |
| TGAAAAGCCGACTGTCTAGA+AGG | + | chr8.3:20733343-20733362 | None:intergenic | 45.0% | |
| TGTCTTGAACCTTCGGGAAA+GGG | + | chr8.3:20731517-20731536 | None:intergenic | 45.0% | |
| TGTTCTCATTGCAGCCACAA+TGG | - | chr8.3:20730483-20730502 | MS.gene71972:CDS | 45.0% | |
| TTGGGCTCTTGGAATGTACT+GGG | + | chr8.3:20733219-20733238 | None:intergenic | 45.0% | |
| ! | ACTATATGGTTCGGCTCAAG+TGG | - | chr8.3:20731382-20731401 | MS.gene71972:intron | 45.0% |
| ! | ATCGACATTGATTGGGCTCT+TGG | + | chr8.3:20733230-20733249 | None:intergenic | 45.0% |
| ! | GCATTGATGTCGGGCTTTAA+TGG | + | chr8.3:20733064-20733083 | None:intergenic | 45.0% |
| ! | GGGTCTGGACTTTTGAATAC+CGG | - | chr8.3:20730618-20730637 | MS.gene71972:CDS | 45.0% |
| ! | GGTCTGGACTTTTGAATACC+GGG | - | chr8.3:20730619-20730638 | MS.gene71972:CDS | 45.0% |
| ! | TGCGGTACCATTGAAGTATC+AGG | + | chr8.3:20732908-20732927 | None:intergenic | 45.0% |
| ! | TGCTGATGGTTATGGTTCTG+AGG | - | chr8.3:20730683-20730702 | MS.gene71972:CDS | 45.0% |
| ! | TTCTTGAGTTGTGCCCATTG+TGG | + | chr8.3:20730500-20730519 | None:intergenic | 45.0% |
| ! | TTTTTGTCCAGGTCGAACTC+TGG | - | chr8.3:20731480-20731499 | MS.gene71972:intron | 45.0% |
| !! | AAACATGGCTCTGGGGTATT+TGG | - | chr8.3:20732495-20732514 | MS.gene71972:intron | 45.0% |
| !! | GATCATGGTGCTGATGGTTA+TGG | - | chr8.3:20730675-20730694 | MS.gene71972:CDS | 45.0% |
| !! | GATCCGGAAAAGTGCTAGTA+TGG | - | chr8.3:20730569-20730588 | MS.gene71972:CDS | 45.0% |
| !! | TGAACCAGGAGTATTTGACC+CGG | + | chr8.3:20730640-20730659 | None:intergenic | 45.0% |
| !!! | GGTTCTGAGGATTTTGTTCC+TGG | - | chr8.3:20730696-20730715 | MS.gene71972:CDS | 45.0% |
| !!! | AATATTATATTTTTGATTTT+TGG | - | chr8.3:20730913-20730932 | MS.gene71972:CDS | 5.0% |
| AACCAGCCATGGTTGAACTG+CGG | + | chr8.3:20732621-20732640 | None:intergenic | 50.0% | |
| ACAAGCTGGGCAAAGGTGAT+TGG | - | chr8.3:20732039-20732058 | MS.gene71972:intron | 50.0% | |
| ATCTAGGCCCTACTCACTCT+TGG | + | chr8.3:20731692-20731711 | None:intergenic | 50.0% | |
| ATGTGTCTAGGCGGAAGAGA+CGG | - | chr8.3:20732147-20732166 | MS.gene71972:intron | 50.0% | |
| ATTAAATACCGGGCTGTGGC+AGG | - | chr8.3:20731288-20731307 | MS.gene71972:intron | 50.0% | |
| CAGGTCGAACTCTGGATTAC+CGG | - | chr8.3:20731488-20731507 | MS.gene71972:intron | 50.0% | |
| CATCCTTCCCAAGAGTGAGT+AGG | - | chr8.3:20731681-20731700 | MS.gene71972:CDS | 50.0% | |
| CATTCTTCATCGAGTGGAGG+AGG | + | chr8.3:20732992-20733011 | None:intergenic | 50.0% | |
| CCTGGTGAAAACCCTGATCA+TGG | - | chr8.3:20730660-20730679 | MS.gene71972:CDS | 50.0% | |
| CGACATCAATGCACAAGCGT+CGG | - | chr8.3:20733072-20733091 | MS.gene71972:intron | 50.0% | |
| CGGGAAGTAGAAGAAGAACC+AGG | + | chr8.3:20730717-20730736 | None:intergenic | 50.0% | |
| CTACTCACTCTTGGGAAGGA+TGG | + | chr8.3:20731683-20731702 | None:intergenic | 50.0% | |
| CTATGTTCCTCCTCAGTCCA+TGG | + | chr8.3:20731999-20732018 | None:intergenic | 50.0% | |
| CTCTTGGAATGTACTGGGGT+TGG | + | chr8.3:20733214-20733233 | None:intergenic | 50.0% | |
| GAACCAACTAGTTCCCTGGT+TGG | - | chr8.3:20732563-20732582 | MS.gene71972:intron | 50.0% | |
| GCAGGCACCTGATACTTCAA+TGG | - | chr8.3:20732898-20732917 | MS.gene71972:intron | 50.0% | |
| GCTGCAATGAGAACAACGAC+GGG | + | chr8.3:20730478-20730497 | None:intergenic | 50.0% | |
| GGACCTCATCCCCCATAATT+AGG | + | chr8.3:20731170-20731189 | None:intergenic | 50.0% | |
| GGATTGAACAAGCTGGGCAA+AGG | - | chr8.3:20732032-20732051 | MS.gene71972:intron | 50.0% | |
| GGCAAAGCAATGTGTCTAGG+CGG | - | chr8.3:20732138-20732157 | MS.gene71972:intron | 50.0% | |
| GGCTGCAATGAGAACAACGA+CGG | + | chr8.3:20730479-20730498 | None:intergenic | 50.0% | |
| GGGGTGAAACAAGCTAGACA+AGG | + | chr8.3:20731325-20731344 | None:intergenic | 50.0% | |
| GGTATAAGTCTCAGGCCATG+TGG | - | chr8.3:20731070-20731089 | MS.gene71972:intron | 50.0% | |
| GTGCCTAATTATGGGGGATG+AGG | - | chr8.3:20731164-20731183 | MS.gene71972:intron | 50.0% | |
| GTGTCTTGAACCTTCGGGAA+AGG | + | chr8.3:20731518-20731537 | None:intergenic | 50.0% | |
| GTTGAACCGCAGTTCAACCA+TGG | - | chr8.3:20732612-20732631 | MS.gene71972:intron | 50.0% | |
| GTTTACGAGACAGAGTCGAG+GGG | + | chr8.3:20733306-20733325 | None:intergenic | 50.0% | |
| TCTAGGCCCTACTCACTCTT+GGG | + | chr8.3:20731691-20731710 | None:intergenic | 50.0% | |
| TGGGCTCTTGGAATGTACTG+GGG | + | chr8.3:20733218-20733237 | None:intergenic | 50.0% | |
| ! | AACCCTGATCATGGTGCTGA+TGG | - | chr8.3:20730669-20730688 | MS.gene71972:CDS | 50.0% |
| ! | AGCACTTTTCCGGATCCCAT+CGG | + | chr8.3:20730565-20730584 | None:intergenic | 50.0% |
| ! | CCATGATCAGGGTTTTCACC+AGG | + | chr8.3:20730663-20730682 | None:intergenic | 50.0% |
| ! | CGACGCTTGTGCATTGATGT+CGG | + | chr8.3:20733074-20733093 | None:intergenic | 50.0% |
| ! | GACGCTTGTGCATTGATGTC+GGG | + | chr8.3:20733073-20733092 | None:intergenic | 50.0% |
| ! | GGAACTAGTTGGTTCCCTCT+CGG | + | chr8.3:20732558-20732577 | None:intergenic | 50.0% |
| ! | TCTTTCTTAGGAGCTGGCTC+AGG | + | chr8.3:20733172-20733191 | None:intergenic | 50.0% |
| AACCGCAGTTCAACCATGGC+TGG | - | chr8.3:20732616-20732635 | MS.gene71972:intron | 55.0% | |
| AATAGCCGGACCGAACCAAC+CGG | - | chr8.3:20732527-20732546 | MS.gene71972:intron | 55.0% | |
| CACAGAACAGTCCCACAAGC+TGG | + | chr8.3:20733373-20733392 | None:intergenic | 55.0% | |
| CACTCTTGGGAAGGATGGGA+AGG | + | chr8.3:20731678-20731697 | None:intergenic | 55.0% | |
| CGGTAATCCAGAGTTCGACC+TGG | + | chr8.3:20731490-20731509 | None:intergenic | 55.0% | |
| GAGGGAACCAACTAGTTCCC+TGG | - | chr8.3:20732559-20732578 | MS.gene71972:intron | 55.0% | |
| GTCGAACTCTGGATTACCGG+AGG | - | chr8.3:20731491-20731510 | MS.gene71972:intron | 55.0% | |
| GTGATTGGCGTGGAATTGCC+AGG | - | chr8.3:20732054-20732073 | MS.gene71972:intron | 55.0% | |
| ! | GGGTTTTCACCAGGTGAACC+AGG | + | chr8.3:20730654-20730673 | None:intergenic | 55.0% |
| !! | CTTAGCCACTATAGCGGGTC+CGG | - | chr8.3:20730597-20730616 | MS.gene71972:CDS | 55.0% |
| !! | TTAGCCACTATAGCGGGTCC+GGG | - | chr8.3:20730598-20730617 | MS.gene71972:CDS | 55.0% |
| AACCAACCGGTTGTGCCGAG+AGG | - | chr8.3:20732540-20732559 | MS.gene71972:intron | 60.0% | |
| AACCTTCGGGAAAGGGCCTC+CGG | + | chr8.3:20731510-20731529 | None:intergenic | 60.0% | |
| ACCAACCGGTTGTGCCGAGA+GGG | - | chr8.3:20732541-20732560 | MS.gene71972:intron | 60.0% | |
| AGTGGAGGAGGAGCAGGCAA+AGG | + | chr8.3:20732980-20732999 | None:intergenic | 60.0% | |
| CTGGGCAAAGGTGATTGGCG+TGG | - | chr8.3:20732044-20732063 | MS.gene71972:intron | 60.0% | |
| GGCCCTACTCACTCTTGGGA+AGG | + | chr8.3:20731687-20731706 | None:intergenic | 60.0% | |
| GTCAAACACCTGCCACAGCC+CGG | + | chr8.3:20731299-20731318 | None:intergenic | 60.0% | |
| GTGGAGGAGGAGCAGGCAAA+GGG | + | chr8.3:20732979-20732998 | None:intergenic | 60.0% | |
| TCATCGAGTGGAGGAGGAGC+AGG | + | chr8.3:20732986-20733005 | None:intergenic | 60.0% | |
| TGGTTCCCTCTCGGCACAAC+CGG | + | chr8.3:20732549-20732568 | None:intergenic | 60.0% | |
| ! | AGGCACTCCATGGACTGAGG+AGG | - | chr8.3:20731989-20732008 | MS.gene71972:intron | 60.0% |
| ! | CTCGGCACAACCGGTTGGTT+CGG | + | chr8.3:20732540-20732559 | None:intergenic | 60.0% |
| ! | GCGTGACTGGCCACTTGAGT+AGG | + | chr8.3:20732101-20732120 | None:intergenic | 60.0% |
| ! | GTCGGGCTTTAATGGGGCAG+AGG | + | chr8.3:20733056-20733075 | None:intergenic | 60.0% |
| ! | TGCAGGCACTCCATGGACTG+AGG | - | chr8.3:20731986-20732005 | MS.gene71972:intron | 60.0% |
| !! | CACAACCGGTTGGTTCGGTC+CGG | + | chr8.3:20732535-20732554 | None:intergenic | 60.0% |
| !! | TGCACAAGCGTCGGCTTACC+CGG | - | chr8.3:20733081-20733100 | MS.gene71972:intron | 60.0% |
| CAGACCCGGACCCGCTATAG+TGG | + | chr8.3:20730605-20730624 | None:intergenic | 65.0% | |
| TACCGGAGGCCCTTTCCCGA+AGG | - | chr8.3:20731505-20731524 | MS.gene71972:intron | 65.0% | |
| TCCCTCTCGGCACAACCGGT+TGG | + | chr8.3:20732545-20732564 | None:intergenic | 65.0% | |
| !! | CACTATAGCGGGTCCGGGTC+TGG | - | chr8.3:20730603-20730622 | MS.gene71972:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 20730471 | 20733393 | 20730471 | ID=MS.gene71972 |
| chr8.3 | mRNA | 20730471 | 20733393 | 20730471 | ID=MS.gene71972.t1;Parent=MS.gene71972 |
| chr8.3 | exon | 20733114 | 20733393 | 20733114 | ID=MS.gene71972.t1.exon1;Parent=MS.gene71972.t1 |
| chr8.3 | CDS | 20733114 | 20733393 | 20733114 | ID=cds.MS.gene71972.t1;Parent=MS.gene71972.t1 |
| chr8.3 | exon | 20731665 | 20731873 | 20731665 | ID=MS.gene71972.t1.exon2;Parent=MS.gene71972.t1 |
| chr8.3 | CDS | 20731665 | 20731873 | 20731665 | ID=cds.MS.gene71972.t1;Parent=MS.gene71972.t1 |
| chr8.3 | exon | 20730471 | 20730962 | 20730471 | ID=MS.gene71972.t1.exon3;Parent=MS.gene71972.t1 |
| chr8.3 | CDS | 20730471 | 20730962 | 20730471 | ID=cds.MS.gene71972.t1;Parent=MS.gene71972.t1 |
| Gene Sequence |
| Protein sequence |
