AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene72198

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72198.t1 MTR_5g074400 96.238 505 13 5 1 502 36 537 0.0 985
MS.gene72198.t1 MTR_3g031220 60.752 479 123 16 2 457 3 439 5.13e-168 484
MS.gene72198.t1 MTR_3g031220 57.882 425 114 16 2 403 3 385 1.01e-129 382
MS.gene72198.t1 MTR_3g031220 62.903 62 22 1 383 444 198 258 1.54e-18 87.8
MS.gene72198.t1 MTR_7g071120 50.000 450 180 13 73 502 30 454 3.58e-126 377
MS.gene72198.t1 MTR_4g013260 48.642 405 150 14 48 446 47 399 6.38e-105 322
MS.gene72198.t1 MTR_3g009470 43.562 466 182 12 47 447 110 559 7.00e-96 305
MS.gene72198.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 1.14e-17 86.7
MS.gene72198.t1 MTR_3g009470 47.253 91 44 3 190 277 477 566 4.33e-15 78.6
MS.gene72198.t1 MTR_5g094430 42.955 440 196 12 26 447 26 428 1.60e-91 289
MS.gene72198.t1 MTR_5g094430 50.649 77 24 2 383 459 200 262 3.81e-15 78.6
MS.gene72198.t1 MTR_3g056100 41.009 456 193 13 28 445 47 464 1.63e-90 288
MS.gene72198.t1 MTR_3g056100 52.000 75 22 2 383 457 243 303 1.46e-15 79.7
MS.gene72198.t1 MTR_3g056100 40.733 464 196 14 28 445 47 477 6.03e-90 287
MS.gene72198.t1 MTR_3g056100 42.056 107 47 3 383 489 243 334 7.22e-16 80.9
MS.gene72198.t1 MTR_7g080020 38.943 511 209 12 25 445 58 555 5.11e-87 283
MS.gene72198.t1 MTR_7g080020 59.701 67 26 1 383 449 280 345 8.52e-17 84.0
MS.gene72198.t1 MTR_7g080020 46.078 102 44 4 206 297 493 593 1.37e-15 80.1
MS.gene72198.t1 MTR_7g011820 40.535 486 210 15 2 460 53 486 1.05e-85 273
MS.gene72198.t1 MTR_3g056100 58.436 243 83 6 203 445 96 320 3.13e-85 270
MS.gene72198.t1 MTR_3g056100 52.000 75 22 2 383 457 99 159 1.60e-15 79.0
MS.gene72198.t1 MTR_3g056100 57.371 251 86 7 203 445 96 333 1.06e-84 269
MS.gene72198.t1 MTR_3g056100 42.056 107 47 3 383 489 99 190 5.48e-16 80.5
MS.gene72198.t1 MTR_7g080000 40.136 441 207 12 43 445 73 494 2.37e-84 275
MS.gene72198.t1 MTR_7g080000 47.222 108 50 5 382 485 233 337 1.52e-15 80.1
MS.gene72198.t1 MTR_5g094430 57.613 243 90 4 205 447 87 316 4.67e-84 266
MS.gene72198.t1 MTR_5g094430 39.496 119 50 3 168 264 193 311 3.81e-16 80.9
MS.gene72198.t1 MTR_5g094430 50.649 77 24 2 383 459 88 150 4.16e-15 77.8
MS.gene72198.t1 MTR_5g094430 57.613 243 90 4 205 447 65 294 5.01e-84 266
MS.gene72198.t1 MTR_5g094430 39.496 119 50 3 168 264 171 289 3.50e-16 80.9
MS.gene72198.t1 MTR_5g094430 50.649 77 24 2 383 459 66 128 4.11e-15 77.8
MS.gene72198.t1 MTR_5g042920 49.828 291 115 9 179 452 112 388 2.67e-79 254
MS.gene72198.t1 MTR_5g042920 41.667 120 64 4 186 301 298 415 1.35e-15 79.3
MS.gene72198.t1 MTR_7g100510 49.597 248 114 3 198 442 181 420 3.87e-75 243
MS.gene72198.t1 MTR_4g082580 48.617 253 83 6 201 452 140 346 2.71e-70 229
MS.gene72198.t1 MTR_3g009470 39.336 422 175 12 47 403 110 515 4.70e-66 222
MS.gene72198.t1 MTR_3g009470 54.118 85 37 2 383 466 280 363 4.53e-18 87.4
MS.gene72198.t1 MTR_5g097490 42.629 251 127 4 196 446 82 315 5.33e-53 184
MS.gene72198.t1 MTR_4g130900 36.977 311 167 9 143 445 132 421 4.06e-47 171
MS.gene72198.t1 MTR_5g097500 33.594 256 138 6 193 446 68 293 6.18e-37 139
MS.gene72198.t1 MTR_5g074200 49.286 140 66 3 177 315 192 327 5.83e-34 131
MS.gene72198.t1 MTR_5g074200 50.000 78 35 2 383 457 220 296 3.08e-16 80.1
MS.gene72198.t1 MTR_8g007270 60.870 92 34 1 348 439 121 210 1.66e-33 127
MS.gene72198.t1 MTR_8g007270 38.333 120 56 4 161 262 92 211 1.46e-15 76.3
MS.gene72198.t1 MTR_1g077780 61.798 89 33 1 364 452 43 130 3.11e-32 120
MS.gene72198.t1 MTR_1g077780 45.122 82 39 2 189 264 40 121 2.09e-15 73.9
MS.gene72198.t1 MTR_3g095080 66.216 74 25 0 366 439 151 224 8.00e-30 117
MS.gene72198.t1 MTR_3g095080 55.172 58 25 1 206 262 168 225 1.18e-14 73.9
MS.gene72198.t1 MTR_3g095080 66.216 74 25 0 366 439 127 200 9.12e-30 116
MS.gene72198.t1 MTR_3g095080 55.172 58 25 1 206 262 144 201 1.28e-14 73.6
MS.gene72198.t1 MTR_8g092140 65.333 75 25 1 366 439 142 216 2.35e-28 113
MS.gene72198.t1 MTR_8g092140 55.172 58 25 1 206 262 160 217 8.89e-15 74.3
MS.gene72198.t1 MTR_7g079010 54.444 90 41 0 350 439 108 197 4.48e-27 108
MS.gene72198.t1 MTR_7g079010 50.769 65 31 1 198 261 133 197 1.44e-14 73.2
MS.gene72198.t1 MTR_4g094588 47.581 124 51 2 340 449 122 245 1.48e-26 110
MS.gene72198.t1 MTR_4g094588 55.072 69 30 1 206 273 178 246 5.90e-16 79.3
MS.gene72198.t1 MTR_2g033820 62.338 77 29 0 367 443 187 263 3.87e-26 110
MS.gene72198.t1 MTR_2g033820 52.941 68 31 1 206 272 203 270 7.81e-15 76.6
MS.gene72198.t1 MTR_8g096730 47.059 102 54 0 358 459 45 146 4.70e-26 103
MS.gene72198.t1 MTR_8g096730 56.140 57 24 1 206 261 70 126 3.05e-15 73.6
MS.gene72198.t1 MTR_1g015140 60.526 76 29 1 364 439 84 158 6.19e-26 103
MS.gene72198.t1 MTR_1g015140 50.769 65 31 1 198 261 94 158 1.87e-14 71.6
MS.gene72198.t1 MTR_3g104750 51.190 84 41 0 356 439 77 160 8.80e-26 103
MS.gene72198.t1 MTR_3g104750 52.632 57 26 1 206 261 104 160 1.55e-13 68.9
MS.gene72198.t1 MTR_1g086790 53.846 91 42 0 367 457 142 232 9.12e-26 108
MS.gene72198.t1 MTR_1g086790 51.562 64 30 1 206 268 158 221 1.07e-13 72.4
MS.gene72198.t1 MTR_7g109800 52.747 91 43 0 367 457 129 219 9.43e-26 107
MS.gene72198.t1 MTR_7g109800 37.273 110 62 3 176 278 109 218 4.63e-14 73.2
MS.gene72198.t1 MTR_5g091390 59.259 81 32 1 369 448 143 223 7.77e-25 105
MS.gene72198.t1 MTR_5g091390 52.239 67 31 1 206 271 157 223 1.07e-14 75.5
MS.gene72198.t1 MTR_5g043880 54.878 82 37 0 358 439 99 180 8.80e-25 104
MS.gene72198.t1 MTR_5g043880 57.895 57 23 1 206 261 124 180 1.40e-12 68.6
MS.gene72198.t1 MTR_7g028415 54.321 81 37 0 374 454 84 164 1.22e-24 100
MS.gene72198.t1 MTR_7g028415 52.632 57 26 1 206 261 93 149 2.06e-13 68.9
MS.gene72198.t1 MTR_7g028710 54.321 81 37 0 374 454 84 164 1.22e-24 100
MS.gene72198.t1 MTR_7g028710 52.632 57 26 1 206 261 93 149 2.06e-13 68.9
MS.gene72198.t1 MTR_4g107970 45.946 111 52 3 336 442 132 238 2.63e-24 106
MS.gene72198.t1 MTR_4g107970 52.459 61 27 2 206 264 178 238 1.13e-13 73.9
MS.gene72198.t1 MTR_4g107970 45.946 111 52 3 336 442 209 315 7.07e-24 105
MS.gene72198.t1 MTR_4g107970 52.459 61 27 2 206 264 255 315 1.52e-13 73.6
MS.gene72198.t1 MTR_2g045360 49.020 102 50 2 345 444 172 273 7.87e-24 104
MS.gene72198.t1 MTR_2g045360 39.535 86 45 3 200 278 200 285 2.88e-11 65.9
MS.gene72198.t1 MTR_4g122530 58.442 77 32 0 367 443 192 268 1.06e-23 103
MS.gene72198.t1 MTR_4g122530 53.125 64 29 1 206 268 208 271 1.32e-14 76.3
MS.gene72198.t1 MTR_3g053330 47.727 88 45 1 356 442 224 311 1.22e-23 103
MS.gene72198.t1 MTR_3g053330 40.000 85 49 2 207 289 252 336 2.42e-13 72.4
MS.gene72198.t1 MTR_4g132430 52.381 84 39 1 362 444 106 189 1.41e-23 102
MS.gene72198.t1 MTR_4g132430 49.180 61 29 2 206 264 127 187 2.60e-12 68.6
MS.gene72198.t1 MTR_3g095040 54.667 75 34 0 369 443 104 178 8.65e-23 96.7
MS.gene72198.t1 MTR_3g095040 53.333 60 27 1 206 264 118 177 5.60e-13 68.2
MS.gene72198.t1 MTR_4g132430 52.381 84 39 1 362 444 240 323 8.87e-23 101
MS.gene72198.t1 MTR_4g132430 49.180 61 29 2 206 264 261 321 7.14e-12 67.8
MS.gene72198.t1 MTR_2g088000 52.381 84 39 1 362 444 328 411 1.20e-22 102
MS.gene72198.t1 MTR_2g088000 39.759 83 48 2 206 286 349 431 4.60e-12 68.9
MS.gene72198.t1 MTR_2g023930 53.165 79 36 1 365 442 287 365 1.22e-22 101
MS.gene72198.t1 MTR_2g023930 50.000 60 28 2 207 264 306 365 2.00e-12 69.7
MS.gene72198.t1 MTR_8g092010 53.425 73 34 0 370 442 95 167 1.43e-22 95.5
MS.gene72198.t1 MTR_8g092010 53.333 60 27 1 206 264 108 167 5.21e-13 67.8
MS.gene72198.t1 MTR_4g094412 53.846 78 35 1 367 443 218 295 2.25e-22 100
MS.gene72198.t1 MTR_4g094412 52.459 61 27 2 206 264 234 294 4.88e-13 71.6
MS.gene72198.t1 MTR_4g094412 53.846 78 35 1 367 443 227 304 2.36e-22 100
MS.gene72198.t1 MTR_4g094412 52.459 61 27 2 206 264 243 303 5.60e-13 71.2
MS.gene72198.t1 MTR_7g110720 48.837 86 43 1 367 451 173 258 2.50e-22 99.4
MS.gene72198.t1 MTR_7g110720 50.000 60 28 2 207 264 190 249 3.71e-12 68.6
MS.gene72198.t1 MTR_7g110720 48.837 86 43 1 367 451 200 285 2.76e-22 99.8
MS.gene72198.t1 MTR_7g110720 50.000 60 28 2 207 264 217 276 3.90e-12 68.6
MS.gene72198.t1 MTR_7g009730 55.000 80 31 2 361 439 201 276 8.87e-22 99.0
MS.gene72198.t1 MTR_7g009730 51.724 58 26 2 206 261 219 276 1.78e-11 67.0
MS.gene72198.t1 MTR_4g049790 46.237 93 49 1 353 444 282 374 4.33e-21 97.1
MS.gene72198.t1 MTR_4g049760 37.879 132 81 1 313 443 220 351 6.47e-21 96.3
MS.gene72198.t1 MTR_1g078260 47.959 98 47 2 343 439 210 304 7.39e-21 95.9
MS.gene72198.t1 MTR_1g078260 50.847 59 27 2 206 262 247 305 5.27e-11 65.1
MS.gene72198.t1 MTR_4g094908 51.765 85 37 2 364 447 250 331 1.06e-20 93.6
MS.gene72198.t1 MTR_4g094908 50.000 58 27 2 207 262 267 324 1.39e-12 69.3
MS.gene72198.t1 MTR_1g009613 56.098 82 32 2 364 444 246 324 2.44e-20 92.4
MS.gene72198.t1 MTR_1g009613 54.386 57 24 2 207 261 263 319 1.30e-11 66.2
MS.gene72198.t1 MTR_7g062220 63.158 57 21 0 383 439 124 180 1.85e-19 89.7
MS.gene72198.t1 MTR_7g062220 63.158 57 20 1 206 261 124 180 1.14e-15 78.2
MS.gene72198.t1 MTR_6g086555 49.398 83 41 1 361 442 184 266 2.14e-19 90.9
MS.gene72198.t1 MTR_6g086555 37.168 113 53 5 204 298 204 316 1.88e-13 72.4
MS.gene72198.t1 MTR_6g046600 68.519 54 17 0 222 275 18 71 2.87e-19 84.0
MS.gene72198.t1 MTR_3g106060 53.425 73 31 3 370 439 123 195 3.02e-19 88.6
MS.gene72198.t1 MTR_3g106060 55.738 61 25 2 207 265 139 199 1.45e-15 77.8
MS.gene72198.t1 MTR_5g016610 51.899 79 37 1 364 441 180 258 8.51e-19 86.7
MS.gene72198.t1 MTR_5g016610 50.000 58 27 2 207 262 200 257 3.48e-12 67.4
MS.gene72198.t1 MTR_4g007060 43.396 106 49 4 353 453 103 202 1.31e-18 86.7
MS.gene72198.t1 MTR_4g007060 51.667 60 27 2 207 264 129 188 3.46e-14 73.6
MS.gene72198.t1 MTR_4g007060 43.396 106 49 4 353 453 137 236 2.01e-18 86.7
MS.gene72198.t1 MTR_4g007060 51.667 60 27 2 207 264 163 222 4.78e-14 73.6
MS.gene72198.t1 MTR_4g127040 48.276 87 44 1 363 448 225 311 2.23e-18 86.3
MS.gene72198.t1 MTR_1g013790 50.794 63 30 1 381 442 99 161 2.29e-18 85.1
MS.gene72198.t1 MTR_1g013790 38.889 90 45 3 195 274 82 171 2.88e-12 67.4
MS.gene72198.t1 MTR_2g105060 54.688 64 28 1 381 443 92 155 2.76e-18 84.7
MS.gene72198.t1 MTR_2g105060 50.000 60 28 2 207 264 95 154 7.10e-13 68.9
MS.gene72198.t1 MTR_2g105060 54.688 64 28 1 381 443 167 230 4.39e-18 85.5
MS.gene72198.t1 MTR_2g105060 50.000 60 28 2 207 264 170 229 9.09e-13 69.7
MS.gene72198.t1 MTR_1g013760 41.935 93 47 4 353 439 106 197 7.59e-18 84.3
MS.gene72198.t1 MTR_1g013760 50.877 57 26 2 207 261 141 197 2.03e-13 71.2
MS.gene72198.t1 MTR_5g093540 40.323 124 50 5 196 315 146 249 2.25e-16 79.3
MS.gene72198.t1 MTR_3g108960 48.718 78 39 1 364 440 295 372 2.34e-16 81.3
MS.gene72198.t1 MTR_4g047580 36.752 117 64 2 338 444 227 343 4.41e-16 81.3
MS.gene72198.t1 MTR_1g070455 49.351 77 38 1 364 439 274 350 5.24e-16 80.1
MS.gene72198.t1 MTR_1g070455 54.237 59 25 2 207 263 294 352 3.74e-13 71.2
MS.gene72198.t1 MTR_8g087000 40.000 90 51 2 384 470 78 167 3.73e-15 75.5
MS.gene72198.t1 MTR_8g087000 39.785 93 48 4 207 297 78 164 5.85e-12 66.2
MS.gene72198.t1 MTR_2g016770 52.381 63 29 1 384 445 36 98 3.84e-15 75.1
MS.gene72198.t1 MTR_2g016770 50.000 60 28 2 207 264 36 95 8.97e-12 65.1
MS.gene72198.t1 MTR_8g087000 40.000 90 51 2 384 470 77 166 3.96e-15 75.5
MS.gene72198.t1 MTR_8g087000 39.785 93 48 4 207 297 77 163 6.22e-12 66.2
MS.gene72198.t1 MTR_2g024350 53.226 62 28 1 384 444 9 70 4.30e-15 75.1
MS.gene72198.t1 MTR_2g024350 58.333 60 23 2 207 264 9 68 7.18e-15 74.3
MS.gene72198.t1 MTR_2g016770 52.381 63 29 1 384 445 28 90 4.98e-15 74.3
MS.gene72198.t1 MTR_2g016770 50.000 60 28 2 207 264 28 87 1.17e-11 64.7
MS.gene72198.t1 MTR_0117s0040 35.333 150 81 6 364 499 57 204 8.06e-15 74.7
MS.gene72198.t1 MTR_7g109600 46.575 73 38 1 384 455 54 126 1.47e-14 74.3
MS.gene72198.t1 MTR_7g109600 51.667 60 27 2 207 264 54 113 2.72e-11 64.3
MS.gene72198.t1 MTR_2g024380 58.333 60 23 2 207 264 252 311 2.23e-14 75.9
MS.gene72198.t1 MTR_2g024380 54.098 61 27 1 384 443 252 312 4.31e-14 74.7
MS.gene72198.t1 MTR_8g067650 53.125 64 28 2 203 264 336 399 6.60e-14 74.3
MS.gene72198.t1 MTR_8g067650 50.000 64 31 1 381 443 337 400 1.79e-12 70.1
MS.gene72198.t1 MTR_1g099600 41.176 85 48 2 364 447 167 250 8.04e-14 72.8
MS.gene72198.t1 MTR_1g099600 49.315 73 33 3 205 275 184 254 1.22e-12 69.3
MS.gene72198.t1 MTR_1g077760 67.500 40 13 0 364 403 95 134 1.66e-13 68.2
MS.gene72198.t1 MTR_8g067635 31.579 171 96 5 203 357 346 511 2.48e-13 72.8
MS.gene72198.t1 MTR_8g067635 50.000 64 31 1 381 443 347 410 1.25e-12 70.5
MS.gene72198.t1 MTR_5g044695 54.167 48 22 0 362 409 56 103 5.81e-13 65.5
MS.gene72198.t1 MTR_2g083870 47.619 63 32 1 384 445 81 143 6.51e-13 69.3
MS.gene72198.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 7.17e-13 71.2
MS.gene72198.t1 MTR_8g098945 43.243 74 41 1 382 454 128 201 7.86e-13 69.3
MS.gene72198.t1 MTR_8g098945 43.011 93 44 5 207 292 130 220 3.73e-12 67.0
MS.gene72198.t1 MTR_2g032030 37.190 121 66 3 346 464 238 350 8.38e-13 70.5
MS.gene72198.t1 MTR_8g069935 44.578 83 44 2 205 285 330 412 1.11e-12 70.5
MS.gene72198.t1 MTR_8g069935 42.857 63 35 1 383 444 331 393 1.58e-11 66.6
MS.gene72198.t1 MTR_3g095080 63.415 41 15 0 366 406 151 191 1.48e-12 67.0
MS.gene72198.t1 MTR_8g028565 46.154 78 40 2 384 460 156 232 2.17e-12 68.6
MS.gene72198.t1 MTR_3g090860 51.724 58 24 2 206 259 133 190 2.33e-12 68.6
MS.gene72198.t1 MTR_3g090860 50.847 59 26 1 382 437 132 190 6.14e-12 67.4
MS.gene72198.t1 MTR_8g099350 51.724 58 24 2 206 259 132 189 2.85e-12 68.6
MS.gene72198.t1 MTR_8g099350 50.000 58 26 1 383 437 132 189 7.20e-11 64.3
MS.gene72198.t1 MTR_5g067680 48.276 58 26 2 206 259 202 259 2.91e-12 68.6
MS.gene72198.t1 MTR_5g067680 48.276 58 27 1 383 437 202 259 1.30e-11 66.6
MS.gene72198.t1 MTR_7g079040 47.692 65 33 1 384 447 155 219 7.40e-12 67.0
MS.gene72198.t1 MTR_6g038890 54.167 48 22 0 362 409 167 214 1.57e-11 64.3
MS.gene72198.t1 MTR_4g007060 40.244 82 43 2 353 433 137 213 1.64e-11 64.7
MS.gene72198.t1 MTR_6g053200 29.412 119 72 3 383 496 330 441 3.14e-11 66.2
MS.gene72198.t1 MTR_4g021780 46.875 64 33 1 202 265 19 81 8.82e-11 59.7
MS.gene72198.t1 MTR_8g027860 42.254 71 32 3 206 272 136 201 8.86e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene72198.t1 AT2G38470 48.283 495 163 18 26 494 40 467 8.54e-110 336
MS.gene72198.t1 AT2G03340 44.394 437 188 14 27 462 108 490 2.62e-94 296
MS.gene72198.t1 AT5G07100 44.681 423 99 11 24 445 8 296 6.04e-94 288
MS.gene72198.t1 AT4G26640 41.627 418 222 7 43 452 7 410 3.51e-91 288
MS.gene72198.t1 AT4G26640 41.627 418 222 7 43 452 47 450 1.42e-90 287
MS.gene72198.t1 AT2G30250 43.750 464 163 14 2 444 3 389 3.01e-90 281
MS.gene72198.t1 AT2G30250 49.383 81 38 2 192 269 312 392 6.27e-16 80.1
MS.gene72198.t1 AT1G13960 41.958 429 173 10 27 442 103 468 6.98e-86 274
MS.gene72198.t1 AT4G26640 54.440 259 99 5 200 452 29 274 1.62e-85 269
MS.gene72198.t1 AT4G26640 54.440 259 99 5 200 452 29 274 1.62e-85 269
MS.gene72198.t1 AT4G26640 54.440 259 99 5 200 452 29 274 1.62e-85 269
MS.gene72198.t1 AT4G26640 54.440 259 99 5 200 452 29 274 1.62e-85 269
MS.gene72198.t1 AT4G26640 54.440 259 99 5 200 452 133 378 7.44e-85 270
MS.gene72198.t1 AT5G07100 57.438 242 41 5 205 445 23 203 9.97e-83 256
MS.gene72198.t1 AT5G07100 57.438 242 41 5 205 445 23 203 9.97e-83 256
MS.gene72198.t1 AT5G07100 57.438 242 41 5 205 445 23 203 9.97e-83 256
MS.gene72198.t1 AT5G07100 57.438 242 41 5 205 445 23 203 9.97e-83 256
MS.gene72198.t1 AT1G13960 51.724 261 102 4 195 442 66 315 2.58e-79 252
MS.gene72198.t1 AT4G26440 48.485 297 109 6 205 461 177 469 4.35e-75 247
MS.gene72198.t1 AT3G01080 51.261 238 78 4 205 442 204 403 6.36e-71 233
MS.gene72198.t1 AT3G01080 59.091 66 26 1 383 448 205 269 3.22e-17 84.7
MS.gene72198.t1 AT3G01080 47.674 86 42 2 182 264 318 403 7.83e-17 83.2
MS.gene72198.t1 AT3G01080 51.261 238 78 4 205 442 166 365 7.46e-71 232
MS.gene72198.t1 AT3G01080 59.091 66 26 1 383 448 167 231 3.21e-17 84.3
MS.gene72198.t1 AT3G01080 47.674 86 42 2 182 264 280 365 7.58e-17 83.2
MS.gene72198.t1 AT2G37260 48.864 264 102 6 198 441 75 325 3.52e-63 209
MS.gene72198.t1 AT2G37260 48.864 264 102 6 198 441 77 327 3.89e-63 209
MS.gene72198.t1 AT2G37260 48.864 264 102 6 198 441 157 407 2.29e-62 210
MS.gene72198.t1 AT2G04880 45.528 246 117 4 206 445 111 345 1.11e-61 209
MS.gene72198.t1 AT2G04880 54.688 64 28 1 381 444 109 171 1.59e-16 82.4
MS.gene72198.t1 AT2G04880 36.301 146 71 5 198 340 275 401 5.28e-16 80.9
MS.gene72198.t1 AT2G04880 43.446 267 116 6 206 445 111 369 3.90e-61 208
MS.gene72198.t1 AT2G04880 54.688 64 28 1 381 444 109 171 1.79e-16 82.4
MS.gene72198.t1 AT2G04880 55.882 68 29 1 198 264 299 366 5.98e-16 80.9
MS.gene72198.t1 AT4G30935 42.194 237 123 5 207 443 169 391 1.10e-48 174
MS.gene72198.t1 AT4G30935 50.000 70 34 1 207 275 332 401 3.52e-15 78.2
MS.gene72198.t1 AT5G56270 78.431 102 20 1 344 445 450 549 2.04e-47 175
MS.gene72198.t1 AT5G56270 39.648 227 119 4 54 269 117 336 3.62e-33 134
MS.gene72198.t1 AT5G56270 60.000 60 23 1 383 442 273 331 1.43e-15 80.1
MS.gene72198.t1 AT5G56270 51.282 78 35 2 190 264 469 546 1.71e-15 79.7
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.16e-46 174
MS.gene72198.t1 AT4G12020 48.529 68 34 1 382 449 467 533 7.19e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.25e-46 174
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 7.18e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.31e-46 174
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 6.99e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.31e-46 174
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 6.99e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.33e-46 174
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 7.01e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.46e-46 174
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 7.08e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.46e-46 174
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 7.08e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.61e-46 174
MS.gene72198.t1 AT4G12020 48.529 68 34 1 382 449 467 533 7.45e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 3.96e-46 173
MS.gene72198.t1 AT4G12020 48.529 68 34 1 382 449 467 533 7.45e-12 68.9
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 391 594 4.51e-46 173
MS.gene72198.t1 AT4G12020 48.529 68 34 1 382 449 400 466 8.21e-12 68.6
MS.gene72198.t1 AT4G12020 47.143 210 104 4 195 403 458 661 7.02e-46 172
MS.gene72198.t1 AT4G12020 50.820 61 29 1 382 442 467 526 9.05e-12 68.6
MS.gene72198.t1 AT2G44745 60.215 93 36 1 348 439 109 201 5.91e-34 128
MS.gene72198.t1 AT2G44745 59.649 57 22 1 206 261 145 201 1.66e-15 76.3
MS.gene72198.t1 AT4G39410 64.474 76 27 0 364 439 204 279 2.98e-28 114
MS.gene72198.t1 AT4G39410 45.946 74 37 2 192 262 207 280 1.53e-13 72.0
MS.gene72198.t1 AT1G55600 60.241 83 33 0 362 444 286 368 6.02e-28 117
MS.gene72198.t1 AT1G55600 55.932 59 25 1 207 264 308 366 3.82e-14 75.1
MS.gene72198.t1 AT1G29860 51.376 109 42 2 350 447 93 201 1.02e-26 109
MS.gene72198.t1 AT1G29860 49.333 75 36 2 206 279 136 209 7.77e-15 75.5
MS.gene72198.t1 AT4G18170 62.338 77 29 0 367 443 156 232 1.37e-26 110
MS.gene72198.t1 AT4G18170 38.571 140 83 3 206 343 172 310 2.63e-14 74.3
MS.gene72198.t1 AT3G01080 70.312 64 19 0 205 268 204 267 2.71e-26 109
MS.gene72198.t1 AT3G01080 59.091 66 26 1 383 448 205 269 8.44e-18 84.7
MS.gene72198.t1 AT1G69310 60.256 78 31 0 362 439 126 203 4.11e-26 108
MS.gene72198.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.56e-12 68.6
MS.gene72198.t1 AT1G69310 60.256 78 31 0 362 439 126 203 4.11e-26 108
MS.gene72198.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.56e-12 68.6
MS.gene72198.t1 AT1G69310 60.256 78 31 0 362 439 126 203 4.11e-26 108
MS.gene72198.t1 AT1G69310 54.386 57 25 1 206 261 147 203 1.56e-12 68.6
MS.gene72198.t1 AT1G64000 59.211 76 31 0 364 439 95 170 1.12e-25 104
MS.gene72198.t1 AT1G64000 56.140 57 24 1 206 261 114 170 5.75e-15 73.9
MS.gene72198.t1 AT5G41570 59.211 76 31 0 364 439 79 154 1.69e-25 103
MS.gene72198.t1 AT5G41570 56.140 57 24 1 206 261 98 154 1.46e-14 72.4
MS.gene72198.t1 AT5G13080 53.012 83 39 0 370 452 54 136 5.60e-25 100
MS.gene72198.t1 AT5G13080 54.386 57 25 1 206 261 67 123 3.18e-15 73.2
MS.gene72198.t1 AT5G49520 61.728 81 30 1 367 446 205 285 8.24e-25 106
MS.gene72198.t1 AT5G49520 53.125 64 29 1 206 268 221 284 8.29e-14 73.6
MS.gene72198.t1 AT5G26170 58.571 70 29 0 370 439 100 169 8.58e-25 101
MS.gene72198.t1 AT5G26170 51.724 58 27 1 206 262 113 170 1.43e-14 72.4
MS.gene72198.t1 AT5G46350 52.688 93 44 0 369 461 169 261 1.10e-24 105
MS.gene72198.t1 AT5G46350 50.000 72 35 1 198 268 175 246 3.60e-13 70.9
MS.gene72198.t1 AT2G46130 53.571 84 39 0 356 439 3 86 1.97e-24 98.2
MS.gene72198.t1 AT2G46130 59.649 57 22 1 206 261 30 86 6.87e-16 73.9
MS.gene72198.t1 AT2G47260 59.211 76 31 0 367 442 158 233 2.54e-24 104
MS.gene72198.t1 AT2G47260 53.125 64 29 1 206 268 174 237 3.57e-14 74.3
MS.gene72198.t1 AT1G62300 42.657 143 68 5 314 442 230 372 4.07e-24 106
MS.gene72198.t1 AT1G62300 50.000 60 28 2 207 264 313 372 1.03e-11 67.8
MS.gene72198.t1 AT4G04450 52.809 89 41 1 357 444 172 260 6.35e-24 104
MS.gene72198.t1 AT4G04450 43.836 73 39 2 207 277 199 271 3.25e-12 68.9
MS.gene72198.t1 AT3G01970 62.500 72 27 0 370 441 52 123 6.96e-24 97.8
MS.gene72198.t1 AT3G01970 57.627 59 22 2 206 262 65 122 4.27e-13 67.4
MS.gene72198.t1 AT5G15130 53.846 78 35 1 366 442 168 245 1.24e-23 104
MS.gene72198.t1 AT5G15130 44.595 74 39 2 206 277 185 258 2.92e-12 69.3
MS.gene72198.t1 AT5G64810 57.746 71 30 0 370 440 97 167 1.35e-23 98.6
MS.gene72198.t1 AT5G64810 50.877 57 27 1 206 261 110 166 1.65e-12 66.6
MS.gene72198.t1 AT5G15130 53.846 78 35 1 366 442 210 287 1.56e-23 104
MS.gene72198.t1 AT5G15130 44.595 74 39 2 206 277 227 300 2.82e-12 69.3
MS.gene72198.t1 AT4G04450 52.809 89 41 1 357 444 266 354 3.25e-23 103
MS.gene72198.t1 AT4G04450 43.836 73 39 2 207 277 293 365 5.04e-12 68.6
MS.gene72198.t1 AT4G22070 51.724 87 41 1 357 442 271 357 7.94e-23 102
MS.gene72198.t1 AT4G22070 50.000 60 28 2 207 264 298 357 9.16e-12 67.8
MS.gene72198.t1 AT4G22070 51.724 87 41 1 357 442 271 357 7.94e-23 102
MS.gene72198.t1 AT4G22070 50.000 60 28 2 207 264 298 357 9.16e-12 67.8
MS.gene72198.t1 AT4G22070 51.724 87 41 1 357 442 271 357 7.94e-23 102
MS.gene72198.t1 AT4G22070 50.000 60 28 2 207 264 298 357 9.16e-12 67.8
MS.gene72198.t1 AT4G22070 51.724 87 41 1 357 442 271 357 7.94e-23 102
MS.gene72198.t1 AT4G22070 50.000 60 28 2 207 264 298 357 9.16e-12 67.8
MS.gene72198.t1 AT1G68150 53.846 78 35 1 367 443 219 296 2.25e-22 99.4
MS.gene72198.t1 AT1G68150 52.459 61 27 2 206 264 235 295 2.83e-13 71.6
MS.gene72198.t1 AT1G18860 52.564 78 36 1 366 442 222 299 1.48e-21 98.2
MS.gene72198.t1 AT1G18860 50.820 61 28 2 206 264 239 299 2.54e-11 66.2
MS.gene72198.t1 AT1G69310 56.410 78 30 1 362 439 126 199 2.08e-21 94.7
MS.gene72198.t1 AT3G62340 47.525 101 43 1 367 467 102 192 7.02e-21 93.2
MS.gene72198.t1 AT3G62340 50.000 74 35 2 206 277 118 191 2.94e-13 70.5
MS.gene72198.t1 AT4G01720 54.545 77 34 1 367 442 223 299 1.26e-20 95.1
MS.gene72198.t1 AT4G01720 37.037 108 60 4 165 264 192 299 2.14e-11 66.6
MS.gene72198.t1 AT2G46130 50.000 84 38 1 356 439 3 82 8.55e-20 85.1
MS.gene72198.t1 AT2G46130 54.386 57 21 2 206 261 30 82 2.27e-11 61.2
MS.gene72198.t1 AT2G21900 50.000 76 35 1 372 444 95 170 1.71e-19 87.0
MS.gene72198.t1 AT2G21900 46.269 67 35 1 206 271 109 175 1.13e-12 67.4
MS.gene72198.t1 AT4G31550 55.128 78 31 2 364 440 230 304 1.98e-19 89.7
MS.gene72198.t1 AT4G31550 49.333 75 36 2 207 279 247 321 7.52e-14 73.2
MS.gene72198.t1 AT4G31550 55.128 78 31 2 364 440 229 303 1.99e-19 89.7
MS.gene72198.t1 AT4G31550 49.333 75 36 2 207 279 246 320 7.05e-14 73.2
MS.gene72198.t1 AT2G24570 57.143 77 29 2 364 439 227 300 2.38e-19 89.4
MS.gene72198.t1 AT2G24570 54.386 57 24 2 207 261 244 300 5.19e-13 70.5
MS.gene72198.t1 AT4G24240 52.500 80 37 1 363 441 261 340 2.38e-19 90.1
MS.gene72198.t1 AT4G24240 53.448 58 25 2 207 262 282 339 3.77e-13 71.2
MS.gene72198.t1 AT2G23320 50.633 79 35 2 364 441 224 299 2.82e-19 89.0
MS.gene72198.t1 AT2G23320 53.448 58 25 2 207 262 241 298 2.11e-12 68.6
MS.gene72198.t1 AT4G31800 50.704 71 33 2 376 444 103 173 1.55e-18 85.5
MS.gene72198.t1 AT4G31800 38.776 98 55 4 197 290 100 196 1.91e-14 73.6
MS.gene72198.t1 AT1G80840 51.562 64 30 1 381 443 144 207 2.65e-18 85.9
MS.gene72198.t1 AT1G80840 53.333 60 26 2 207 264 147 206 3.74e-13 70.5
MS.gene72198.t1 AT4G31800 50.704 71 33 2 376 444 168 238 3.01e-18 85.9
MS.gene72198.t1 AT4G31800 38.776 98 55 4 197 290 165 261 3.50e-14 73.9
MS.gene72198.t1 AT5G43290 43.434 99 38 2 359 439 72 170 1.28e-17 83.6
MS.gene72198.t1 AT5G43290 63.793 58 20 1 205 261 113 170 4.49e-16 79.0
MS.gene72198.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.73e-17 82.0
MS.gene72198.t1 AT2G25000 47.619 63 31 2 207 267 104 166 1.01e-12 68.2
MS.gene72198.t1 AT2G25000 50.000 64 31 1 382 444 102 165 1.73e-17 82.0
MS.gene72198.t1 AT2G25000 47.619 63 31 2 207 267 104 166 1.01e-12 68.2
MS.gene72198.t1 AT5G28650 50.649 77 37 1 364 439 243 319 1.92e-17 84.0
MS.gene72198.t1 AT5G28650 54.237 59 25 2 207 263 263 321 8.53e-13 70.1
MS.gene72198.t1 AT2G25000 50.000 64 31 1 382 444 124 187 3.57e-17 81.6
MS.gene72198.t1 AT2G25000 47.619 63 31 2 207 267 126 188 1.23e-12 68.2
MS.gene72198.t1 AT2G25000 50.000 64 31 1 382 444 145 208 5.31e-17 81.6
MS.gene72198.t1 AT2G25000 47.619 63 31 2 207 267 147 209 1.84e-12 68.2
MS.gene72198.t1 AT3G04670 50.649 77 37 1 364 439 243 319 5.74e-17 82.4
MS.gene72198.t1 AT3G04670 52.542 59 26 2 207 263 263 321 1.15e-12 69.7
MS.gene72198.t1 AT1G69810 46.835 79 40 2 366 442 128 206 6.59e-17 82.4
MS.gene72198.t1 AT1G69810 46.835 79 40 2 366 442 186 264 8.97e-17 82.4
MS.gene72198.t1 AT2G30590 51.948 77 36 1 364 439 294 370 9.74e-17 82.4
MS.gene72198.t1 AT2G30590 54.237 59 25 2 207 263 314 372 5.11e-12 67.8
MS.gene72198.t1 AT4G23550 44.156 77 42 1 372 447 129 205 4.34e-15 76.6
MS.gene72198.t1 AT5G52830 40.404 99 56 3 364 460 147 244 1.10e-13 72.8
MS.gene72198.t1 AT5G52830 44.048 84 43 3 205 286 164 245 3.60e-12 68.2
MS.gene72198.t1 AT4G01250 50.769 65 31 1 384 447 129 193 1.52e-13 71.6
MS.gene72198.t1 AT1G29280 50.000 60 29 1 384 442 75 134 1.70e-13 70.9
MS.gene72198.t1 AT5G24110 38.182 110 51 3 197 302 104 200 3.09e-13 70.9
MS.gene72198.t1 AT2G40740 36.283 113 52 4 330 438 135 231 1.15e-12 68.9
MS.gene72198.t1 AT2G40740 33.884 121 66 6 206 321 173 284 6.74e-12 66.6
MS.gene72198.t1 AT2G40740 36.607 112 51 4 330 437 144 239 1.31e-12 68.9
MS.gene72198.t1 AT2G40740 33.884 121 66 6 206 321 182 293 8.28e-12 66.6
MS.gene72198.t1 AT3G58710 48.387 62 31 1 384 444 72 133 1.65e-12 68.2
MS.gene72198.t1 AT3G58710 48.387 62 31 1 384 444 71 132 1.77e-12 68.2
MS.gene72198.t1 AT2G34830 37.624 101 54 2 346 445 195 287 4.67e-12 68.6
MS.gene72198.t1 AT2G34830 37.624 101 54 2 346 445 186 278 4.90e-12 68.2
MS.gene72198.t1 AT1G30650 37.624 101 54 2 346 445 188 280 5.76e-12 68.2
MS.gene72198.t1 AT4G23810 45.588 68 33 2 197 260 149 216 4.75e-11 64.7
MS.gene72198.t1 AT4G11070 45.588 68 31 3 197 259 100 166 5.55e-11 63.9
MS.gene72198.t1 AT2G46400 42.308 78 38 3 206 276 104 181 6.28e-11 63.9
MS.gene72198.t1 AT5G45050 46.154 65 34 1 384 447 1042 1106 7.25e-11 65.5
MS.gene72198.t1 AT4G11070 45.588 68 31 3 197 259 132 198 7.42e-11 63.9
MS.gene72198.t1 AT5G45050 46.154 65 34 1 384 447 1181 1245 8.10e-11 65.5
MS.gene72198.t1 AT5G45050 46.154 65 34 1 384 447 1153 1217 8.42e-11 65.5

Find 127 sgRNAs with CRISPR-Local

Find 199 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTGTGGTTGCTGGTAAC+TGG 0.245732 5.2:-17952772 None:intergenic
AGTTACTGAGATAGTTTATA+AGG 0.282812 5.2:+17952953 MS.gene72198:CDS
GGATACAATTGGCGAAAATA+TGG 0.295221 5.2:+17952828 MS.gene72198:CDS
ATGGCCATTGCTCCATTGTT+TGG 0.299684 5.2:-17954462 None:intergenic
ATCATCTGATCTTCGGCTTA+AGG 0.306175 5.2:-17952805 None:intergenic
AACGTGCCTCACATGATTTA+AGG 0.307899 5.2:+17954334 MS.gene72198:CDS
GAGTTGGTTGCTGTGGTTGC+TGG 0.312817 5.2:-17952779 None:intergenic
TTCTTCTTAGTAGGACAGTT+AGG 0.312859 5.2:-17952906 None:intergenic
CTGCAGGGCCAAGGAAATTA+TGG 0.315509 5.2:+17954552 MS.gene72198:CDS
ATTTCATTGATTGGATTAAC+AGG 0.319458 5.2:-17953050 None:intergenic
TCTCTCACAGTTCTACTTGC+AGG 0.324754 5.2:-17953573 None:intergenic
AAGTAAGAAGAAGGAGAAAC+AGG 0.327987 5.2:-17951340 None:intergenic
CTTGGCCCTGCAGCATTTGA+AGG 0.331367 5.2:-17954542 None:intergenic
CAGCAGCAGGCCCTTGTTGT+TGG 0.337044 5.2:-17952091 None:intergenic
GGTTACAGATGGAGGAAATA+TGG 0.355775 5.2:+17953645 MS.gene72198:CDS
CTGCTCAAAGCAACTACAAT+TGG 0.363470 5.2:+17952012 MS.gene72198:CDS
CTGACTCTGAAGAGGCCTTA+TGG 0.364763 5.2:-17954481 None:intergenic
TGATCATGGATTTCATTGAT+TGG 0.366627 5.2:-17953059 None:intergenic
AGCAGCAGGCCCTTGTTGTT+GGG 0.372679 5.2:-17952090 None:intergenic
TGCTTCCTCACTGGACAGTT+AGG 0.375493 5.2:-17954306 None:intergenic
TTGGAAGAGTTAAGCATAAC+AGG 0.378565 5.2:-17951406 None:intergenic
GTGCATTTGTAGTAACTTCT+CGG 0.379548 5.2:-17952879 None:intergenic
TTTGGATTTGAAGGGTTGTT+TGG 0.379730 5.2:-17954444 None:intergenic
AAATCCATTGTTGGTGTTGT+TGG 0.383862 5.2:-17952736 None:intergenic
GCTCCATTGTTTGGATTTGA+AGG 0.388455 5.2:-17954453 None:intergenic
GAGAATTCTTCAATATCAAT+TGG 0.394609 5.2:+17953131 MS.gene72198:CDS
ATATGGACAGAAAGTTGTTA+AGG 0.395162 5.2:+17953662 MS.gene72198:CDS
CAGCAGAAGGAGAAGCTAAA+AGG 0.400048 5.2:-17951234 None:intergenic
TCTTACTTTGCTATTCCTCC+TGG 0.408483 5.2:+17951355 MS.gene72198:CDS
CTCTCAACTTTCTTCTTAGT+AGG 0.422831 5.2:-17952915 None:intergenic
TTGAGAATCCATAATTTCCT+TGG 0.432499 5.2:-17954560 None:intergenic
GGCTGTGATCACAACTTATG+AGG 0.435418 5.2:+17954356 MS.gene72198:CDS
TGTATCCATCATCTGATCTT+CGG 0.437503 5.2:-17952812 None:intergenic
ATATGGACAAAAGCAAGTTA+AGG 0.439389 5.2:+17952845 MS.gene72198:CDS
GCAGCAAAAGCACCAGTTGT+AGG 0.442196 5.2:-17951993 None:intergenic
GGTGACAAAGGCAAAGAAGG+AGG 0.447096 5.2:-17951313 None:intergenic
GGAGGTGACAAAGGCAAAGA+AGG 0.447183 5.2:-17951316 None:intergenic
GTCCCCGCTGCTCGTGGAAG+TGG 0.447277 5.2:+17954396 MS.gene72198:CDS
GGAGAATCAAGAAGGTCAGC+AGG 0.448810 5.2:-17951385 None:intergenic
CAGATGATAATAACAATTCA+AGG 0.459469 5.2:+17951263 MS.gene72198:CDS
TATGGACAAAAGCAAGTTAA+GGG 0.462416 5.2:+17952846 MS.gene72198:CDS
GTTACTGAGATAGTTTATAA+GGG 0.464337 5.2:+17952954 MS.gene72198:CDS
CTTCCACTTCCACGAGCAGC+GGG 0.465424 5.2:-17954399 None:intergenic
ATTCAACCTTCAAATGCTGC+AGG 0.465828 5.2:+17954536 MS.gene72198:CDS
ACGTGCCTCACATGATTTAA+GGG 0.466411 5.2:+17954335 MS.gene72198:CDS
GAAAGTTGAGAGATCAATTG+AGG 0.467515 5.2:+17952926 MS.gene72198:CDS
CACCACCAGATCGACTCCTT+TGG 0.467879 5.2:-17953184 None:intergenic
GGAATAGCAAAGTAAGAAGA+AGG 0.472115 5.2:-17951349 None:intergenic
TTTGAAGGGTTGTTTGGCAT+TGG 0.472870 5.2:-17954438 None:intergenic
ATTGATATTGAAGAATTCTC+AGG 0.475349 5.2:-17953128 None:intergenic
TCTTCTTAGTAGGACAGTTA+GGG 0.476077 5.2:-17952905 None:intergenic
GCATTGGTCTGTTCACAGAA+TGG 0.477391 5.2:-17954422 None:intergenic
TATGGACAGAAAGTTGTTAA+GGG 0.480574 5.2:+17953663 MS.gene72198:CDS
AACAAGTGACATTGATATCC+TGG 0.483451 5.2:+17953617 MS.gene72198:CDS
CGTTCGACATGCTTCCTCAC+TGG 0.483827 5.2:-17954315 None:intergenic
CTTCGGCTTAAGGTTTGAGT+TGG 0.484985 5.2:-17952795 None:intergenic
TTTCAATCATCAACTGTTGG+TGG 0.485570 5.2:+17952134 MS.gene72198:CDS
ACAATGGAGCAATGGCCATA+AGG 0.487638 5.2:+17954466 MS.gene72198:CDS
GATCAGATGATGGATACAAT+TGG 0.492867 5.2:+17952817 MS.gene72198:CDS
GTTTGAACACTAGCAATCTC+AGG 0.510377 5.2:-17952714 None:intergenic
CTCCATTGTTTGGATTTGAA+GGG 0.516725 5.2:-17954452 None:intergenic
TGCAGCATTTGAAGGTTGAA+TGG 0.516930 5.2:-17954534 None:intergenic
TCATATGCATCACATGGTAA+TGG 0.518462 5.2:+17953083 MS.gene72198:CDS
CTTCAAATGCTGCAGGGCCA+AGG 0.521689 5.2:+17954543 MS.gene72198:CDS
CACGAGCAGCGGGGACATCA+TGG 0.524422 5.2:-17954389 None:intergenic
AGGAGTCGATCTGGTGGTGC+TGG 0.525212 5.2:+17953188 MS.gene72198:CDS
ATCACATGGTAATGGACAAA+TGG 0.525938 5.2:+17953091 MS.gene72198:CDS
GCTTCCTCACTGGACAGTTA+GGG 0.528656 5.2:-17954305 None:intergenic
GTTGTCTGAACTACAACTCT+AGG 0.534551 5.2:-17953597 None:intergenic
AAGGTTTGAGTTGGTTGCTG+TGG 0.535972 5.2:-17952786 None:intergenic
TCTCACCAAAGGAGTCGATC+TGG 0.539091 5.2:+17953179 MS.gene72198:CDS
TCCATCTGTAACCATCATCC+AGG 0.539396 5.2:-17953635 None:intergenic
AAGGAAATTATGGATTCTCA+AGG 0.541036 5.2:+17954562 MS.gene72198:CDS
AAAGTTGAGAGATCAATTGA+GGG 0.542158 5.2:+17952927 MS.gene72198:CDS
GGGGAATCAGCAAATGAGAA+AGG 0.544170 5.2:+17952049 MS.gene72198:CDS
GTCTGATTGAAATCCATTGT+TGG 0.544770 5.2:-17952745 None:intergenic
GTGGATGCAGTAACAGCAGC+AGG 0.546307 5.2:-17952104 None:intergenic
CATGATGTCCCCGCTGCTCG+TGG 0.546686 5.2:+17954390 MS.gene72198:CDS
GTGATGCATATGACTGATCA+TGG 0.555757 5.2:-17953073 None:intergenic
AGGTCAGCAGGGCTTAAACC+AGG 0.559224 5.2:-17951373 None:intergenic
GAGTTTCTCCTTGTGCATTG+AGG 0.560551 5.2:-17952996 None:intergenic
GTGACAAAGGCAAAGAAGGA+GGG 0.561545 5.2:-17951312 None:intergenic
TGTCCTTGAGGTGCTTGCTG+TGG 0.563779 5.2:-17954507 None:intergenic
CAAACCAACAACACCAACAA+TGG 0.565174 5.2:+17952732 MS.gene72198:CDS
TGATGATTGAAAAGTTGTTG+TGG 0.568622 5.2:-17952123 None:intergenic
AATTGGATGAACAATTCTGA+GGG 0.569230 5.2:+17952029 MS.gene72198:CDS
CAATTGGATGAACAATTCTG+AGG 0.572186 5.2:+17952028 MS.gene72198:CDS
AAAGCACCAGTTGTAGGTGA+TGG 0.572239 5.2:-17951987 None:intergenic
TGACAAAGGCAAAGAAGGAG+GGG 0.573076 5.2:-17951311 None:intergenic
TCCTGGATGATGGTTACAGA+TGG 0.575655 5.2:+17953634 MS.gene72198:CDS
TTAAGCCGAAGATCAGATGA+TGG 0.580885 5.2:+17952807 MS.gene72198:CDS
GCTTCCACTTCCACGAGCAG+CGG 0.581893 5.2:-17954400 None:intergenic
AGATGATAATAACAATTCAA+GGG 0.581933 5.2:+17951264 MS.gene72198:CDS
AGTAAGAAGAAGGAGAAACA+GGG 0.582152 5.2:-17951339 None:intergenic
TTGAGCAGAGTTCTCACCAA+AGG 0.582395 5.2:+17953168 MS.gene72198:CDS
ATCATCTTCTAATGCTCTCG+TGG 0.586135 5.2:+17953022 MS.gene72198:CDS
AATTCTTCAATATCAATTGG+AGG 0.586744 5.2:+17953134 MS.gene72198:CDS
TCATGTAACAGCAACAGCAA+TGG 0.589008 5.2:+17952598 MS.gene72198:intron
AAATCCAAACAATGGAGCAA+TGG 0.589039 5.2:+17954458 MS.gene72198:CDS
TGTGGCCTCTGACTCTGAAG+AGG 0.590935 5.2:-17954489 None:intergenic
GACATTGATATCCTGGATGA+TGG 0.594877 5.2:+17953624 MS.gene72198:CDS
TAAGAAGAAGGAGAAACAGG+GGG 0.597289 5.2:-17951337 None:intergenic
AGGAACCTGAGGCTAAAAGA+TGG 0.599722 5.2:+17953228 MS.gene72198:CDS
GCATAACAGGAGAATCAAGA+AGG 0.606162 5.2:-17951393 None:intergenic
AACCCTTCAAATCCAAACAA+TGG 0.610392 5.2:+17954450 MS.gene72198:CDS
TTAAGGGAAATCCAAATCCA+AGG 0.610722 5.2:+17953679 MS.gene72198:CDS
TGGATGATGGTTACAGATGG+AGG 0.611243 5.2:+17953637 MS.gene72198:CDS
GCTGTGATCACAACTTATGA+GGG 0.613415 5.2:+17954357 MS.gene72198:CDS
GAGAATCAAGAAGGTCAGCA+GGG 0.615872 5.2:-17951384 None:intergenic
CACCAAAGGAGTCGATCTGG+TGG 0.618731 5.2:+17953182 MS.gene72198:CDS
TAAGGCCTCTTCAGAGTCAG+AGG 0.620807 5.2:+17954484 MS.gene72198:CDS
TTGAATGGTGATTGTCCTTG+AGG 0.624194 5.2:-17954519 None:intergenic
TCATCTGAAGAAGCAGCAGA+AGG 0.624295 5.2:-17951247 None:intergenic
TGGTGATGAATTTGATGAAG+AGG 0.626753 5.2:+17953208 MS.gene72198:CDS
AGGCCACAGCAAGCACCTCA+AGG 0.632749 5.2:+17954504 MS.gene72198:CDS
ATGCTAAGCCTCAATGCACA+AGG 0.636500 5.2:+17952988 MS.gene72198:CDS
GATGATAATAACAATTCAAG+GGG 0.636553 5.2:+17951265 MS.gene72198:CDS
GTAAGAAGAAGGAGAAACAG+GGG 0.638139 5.2:-17951338 None:intergenic
ATTTGATGAAGAGGAACCTG+AGG 0.654470 5.2:+17953217 MS.gene72198:CDS
CACAGCCCTTAAATCATGTG+AGG 0.655326 5.2:-17954340 None:intergenic
GACAAAGGCAAAGAAGGAGG+GGG 0.657084 5.2:-17951310 None:intergenic
TTCAACCTTCAAATGCTGCA+GGG 0.658791 5.2:+17954537 MS.gene72198:CDS
GATCAGTCATATGCATCACA+TGG 0.661879 5.2:+17953077 MS.gene72198:CDS
ATTGGATGAACAATTCTGAG+GGG 0.734397 5.2:+17952030 MS.gene72198:CDS
TCAGCAGGGCTTAAACCAGG+AGG 0.737654 5.2:-17951370 None:intergenic
TTCCACTTCCACGAGCAGCG+GGG 0.744388 5.2:-17954398 None:intergenic
CACACCCTAACTGTCCAGTG+AGG 0.744836 5.2:+17954301 MS.gene72198:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATTTTTAATCAATTGA+AGG + chr5.2:17951836-17951855 MS.gene72198:intron 10.0%
!! AAAACATTGAATCATATTTA+TGG - chr5.2:17953285-17953304 None:intergenic 15.0%
!!! CTTTAGTTTTTTTTTTTTGT+TGG + chr5.2:17951874-17951893 MS.gene72198:intron 15.0%
!!! TAAGTTTACATAAAATTTTC+AGG + chr5.2:17953514-17953533 MS.gene72198:intron 15.0%
!!! TTATTTGTTTTTTTTGACAT+GGG + chr5.2:17951522-17951541 MS.gene72198:intron 15.0%
!!! TTTATTTGTTTTTTTTGACA+TGG + chr5.2:17951521-17951540 MS.gene72198:intron 15.0%
!!! TTTTATTTTATTTCAACACT+TGG + chr5.2:17953257-17953276 MS.gene72198:intron 15.0%
!! AAAATGAAAGAAACTAACAT+TGG - chr5.2:17951428-17951447 None:intergenic 20.0%
!! AGATGATAATAACAATTCAA+GGG + chr5.2:17951264-17951283 MS.gene72198:CDS 20.0%
!! ATATTATTATATTGTGGTTG+TGG + chr5.2:17953420-17953439 MS.gene72198:intron 20.0%
!! CTTGATATATTCATTTATGT+AGG + chr5.2:17953472-17953491 MS.gene72198:intron 20.0%
!! GAGATTAAAAAAATTGAAGT+TGG + chr5.2:17952276-17952295 MS.gene72198:intron 20.0%
!! GCAATAAATGCTTATAAAAT+TGG - chr5.2:17952181-17952200 None:intergenic 20.0%
!! GCTCATATATTATTATATTG+TGG + chr5.2:17953414-17953433 MS.gene72198:intron 20.0%
!!! AAAATTTTCAGGAAAAATGA+AGG + chr5.2:17953525-17953544 MS.gene72198:intron 20.0%
!!! AGTTAGTTATTTTTTTACCT+TGG - chr5.2:17953699-17953718 None:intergenic 20.0%
!!! TTATTTTTTTACCTTGGATT+TGG - chr5.2:17953693-17953712 None:intergenic 20.0%
!!! TTTATGTAGGTTTTATTTCA+TGG + chr5.2:17953485-17953504 MS.gene72198:intron 20.0%
!!! TTTTTTTGACATATGTTCAA+TGG + chr5.2:17951788-17951807 MS.gene72198:intron 20.0%
! AAAAATGAAGGTGAAAATGA+GGG + chr5.2:17953537-17953556 MS.gene72198:CDS 25.0%
! AAATATTACCTAGTCAAATG+TGG + chr5.2:17953829-17953848 MS.gene72198:intron 25.0%
! AATGCTGTTACTGAATTTAT+GGG + chr5.2:17951922-17951941 MS.gene72198:intron 25.0%
! AATTCTTCAATATCAATTGG+AGG + chr5.2:17953134-17953153 MS.gene72198:CDS 25.0%
! ACCAATAAGATAAAAGACAT+AGG - chr5.2:17952534-17952553 None:intergenic 25.0%
! AGAAATAGCCAAATTAGAAA+AGG - chr5.2:17953977-17953996 None:intergenic 25.0%
! AGTTACTGAGATAGTTTATA+AGG + chr5.2:17952953-17952972 MS.gene72198:CDS 25.0%
! ATAAGCATTTATTGCATGTT+TGG + chr5.2:17952186-17952205 MS.gene72198:intron 25.0%
! ATATTTGTAAACTGCAATCA+TGG - chr5.2:17953815-17953834 None:intergenic 25.0%
! ATTGATATTGAAGAATTCTC+AGG - chr5.2:17953131-17953150 None:intergenic 25.0%
! CAGATGATAATAACAATTCA+AGG + chr5.2:17951263-17951282 MS.gene72198:CDS 25.0%
! GAGAATTCTTCAATATCAAT+TGG + chr5.2:17953131-17953150 MS.gene72198:CDS 25.0%
! GATGATAATAACAATTCAAG+GGG + chr5.2:17951265-17951284 MS.gene72198:CDS 25.0%
! GTTACTGAGATAGTTTATAA+GGG + chr5.2:17952954-17952973 MS.gene72198:CDS 25.0%
! TAATGCTGTTACTGAATTTA+TGG + chr5.2:17951921-17951940 MS.gene72198:intron 25.0%
! TAGTCAACTCTTGTAAAAAA+AGG - chr5.2:17951754-17951773 None:intergenic 25.0%
! TATTTGTAAACTGCAATCAT+GGG - chr5.2:17953814-17953833 None:intergenic 25.0%
! TTTATGTTGAAGTAAAATGC+AGG + chr5.2:17953357-17953376 MS.gene72198:intron 25.0%
! TTTCATCATCTATGTTTCAT+GGG + chr5.2:17951556-17951575 MS.gene72198:intron 25.0%
!! ACCTATGTCTTTTATCTTAT+TGG + chr5.2:17952530-17952549 MS.gene72198:intron 25.0%
!! ACTGCAATTTAAAACTACTA+TGG + chr5.2:17953443-17953462 MS.gene72198:intron 25.0%
!! ATTTCATTGATTGGATTAAC+AGG - chr5.2:17953053-17953072 None:intergenic 25.0%
!! ATTTGTTCTCTATCTGTTTT+AGG + chr5.2:17953881-17953900 MS.gene72198:intron 25.0%
!! GTGTTTAATTTATGACTTGT+AGG + chr5.2:17954262-17954281 MS.gene72198:intron 25.0%
!! TGCATTTTACTTCAACATAA+AGG - chr5.2:17953358-17953377 None:intergenic 25.0%
!! TTAATTTGAGTATCCAATGA+TGG + chr5.2:17953777-17953796 MS.gene72198:intron 25.0%
!! TTTTCATCATCTATGTTTCA+TGG + chr5.2:17951555-17951574 MS.gene72198:intron 25.0%
!!! AAGATTGTTTGTTTTGTGTT+TGG + chr5.2:17951663-17951682 MS.gene72198:intron 25.0%
!!! CACATTATTTTTGTTGGATT+TGG - chr5.2:17952497-17952516 None:intergenic 25.0%
!!! CATTATTGCTTGTTTCTTTT+TGG + chr5.2:17953912-17953931 MS.gene72198:intron 25.0%
!!! GTTGATCACATTATTTTTGT+TGG - chr5.2:17952503-17952522 None:intergenic 25.0%
!!! TGAAGTTTGAACATGTTTTT+TGG + chr5.2:17951595-17951614 MS.gene72198:intron 25.0%
!!! TTTCTAATTTGGCTATTTCT+TGG + chr5.2:17953977-17953996 MS.gene72198:intron 25.0%
AAAGTTGAGAGATCAATTGA+GGG + chr5.2:17952927-17952946 MS.gene72198:CDS 30.0%
AATTGGATGAACAATTCTGA+GGG + chr5.2:17952029-17952048 MS.gene72198:CDS 30.0%
ATATGGACAAAAGCAAGTTA+AGG + chr5.2:17952845-17952864 MS.gene72198:CDS 30.0%
ATATGGACAGAAAGTTGTTA+AGG + chr5.2:17953662-17953681 MS.gene72198:CDS 30.0%
ATGTTCTTAAATTGCTGATG+CGG + chr5.2:17953309-17953328 MS.gene72198:intron 30.0%
GAAAAATGAAGGTGAAAATG+AGG + chr5.2:17953536-17953555 MS.gene72198:CDS 30.0%
GCTAAGAAAAGTTTGAACAA+AGG + chr5.2:17951709-17951728 MS.gene72198:intron 30.0%
TATGGACAAAAGCAAGTTAA+GGG + chr5.2:17952846-17952865 MS.gene72198:CDS 30.0%
TATGGACAGAAAGTTGTTAA+GGG + chr5.2:17953663-17953682 MS.gene72198:CDS 30.0%
TGATCATGGATTTCATTGAT+TGG - chr5.2:17953062-17953081 None:intergenic 30.0%
TGATGATTGAAAAGTTGTTG+TGG - chr5.2:17952126-17952145 None:intergenic 30.0%
TGTAGTCAGTACATTATTGA+CGG + chr5.2:17952330-17952349 MS.gene72198:intron 30.0%
TTAGAAAAGGCAAGGAAAAT+TGG - chr5.2:17953964-17953983 None:intergenic 30.0%
TTCAAAACATCGATGATCAT+TGG - chr5.2:17952456-17952475 None:intergenic 30.0%
TTGAGAATCCATAATTTCCT+TGG - chr5.2:17954563-17954582 None:intergenic 30.0%
! ACTTTTCAATCATCAACTGT+TGG + chr5.2:17952131-17952150 MS.gene72198:CDS 30.0%
! ACTTTTTACCACATTTGACT+AGG - chr5.2:17953840-17953859 None:intergenic 30.0%
! TTTCCTTGCCTTTTCTAATT+TGG + chr5.2:17953966-17953985 MS.gene72198:intron 30.0%
AAATCCAAACAATGGAGCAA+TGG + chr5.2:17954458-17954477 MS.gene72198:CDS 35.0%
AACAAGTGACATTGATATCC+TGG + chr5.2:17953617-17953636 MS.gene72198:CDS 35.0%
AACCCTTCAAATCCAAACAA+TGG + chr5.2:17954450-17954469 MS.gene72198:CDS 35.0%
AAGTAAGAAGAAGGAGAAAC+AGG - chr5.2:17951343-17951362 None:intergenic 35.0%
AGTAAGAAGAAGGAGAAACA+GGG - chr5.2:17951342-17951361 None:intergenic 35.0%
ATAAAACACCGACACAGAAA+CGG - chr5.2:17954215-17954234 None:intergenic 35.0%
ATTGGATGAACAATTCTGAG+GGG + chr5.2:17952030-17952049 MS.gene72198:CDS 35.0%
CAATTGGATGAACAATTCTG+AGG + chr5.2:17952028-17952047 MS.gene72198:CDS 35.0%
CTCCATTGTTTGGATTTGAA+GGG - chr5.2:17954455-17954474 None:intergenic 35.0%
CTCTCAACTTTCTTCTTAGT+AGG - chr5.2:17952918-17952937 None:intergenic 35.0%
GAAAGTTGAGAGATCAATTG+AGG + chr5.2:17952926-17952945 MS.gene72198:CDS 35.0%
GGAATAGCAAAGTAAGAAGA+AGG - chr5.2:17951352-17951371 None:intergenic 35.0%
GGATACAATTGGCGAAAATA+TGG + chr5.2:17952828-17952847 MS.gene72198:CDS 35.0%
GTCTGATTGAAATCCATTGT+TGG - chr5.2:17952748-17952767 None:intergenic 35.0%
GTGCATTTGTAGTAACTTCT+CGG - chr5.2:17952882-17952901 None:intergenic 35.0%
TAGCCAAATTAGAAAAGGCA+AGG - chr5.2:17953972-17953991 None:intergenic 35.0%
TCATATGCATCACATGGTAA+TGG + chr5.2:17953083-17953102 MS.gene72198:CDS 35.0%
TCTTCTTAGTAGGACAGTTA+GGG - chr5.2:17952908-17952927 None:intergenic 35.0%
TGTATCCATCATCTGATCTT+CGG - chr5.2:17952815-17952834 None:intergenic 35.0%
TTAAGGGAAATCCAAATCCA+AGG + chr5.2:17953679-17953698 MS.gene72198:CDS 35.0%
TTCTTCTTAGTAGGACAGTT+AGG - chr5.2:17952909-17952928 None:intergenic 35.0%
TTGGAAGAGTTAAGCATAAC+AGG - chr5.2:17951409-17951428 None:intergenic 35.0%
TTTCAATCATCAACTGTTGG+TGG + chr5.2:17952134-17952153 MS.gene72198:CDS 35.0%
TTTGGATTTGAAGGGTTGTT+TGG - chr5.2:17954447-17954466 None:intergenic 35.0%
! ATTTACCATCTTTTAGCCTC+AGG - chr5.2:17953236-17953255 None:intergenic 35.0%
! CTTTTCAAACCCAACAACAA+GGG + chr5.2:17952081-17952100 MS.gene72198:CDS 35.0%
! TCTTTTCAAACCCAACAACA+AGG + chr5.2:17952080-17952099 MS.gene72198:CDS 35.0%
! TGGTGATGAATTTGATGAAG+AGG + chr5.2:17953208-17953227 MS.gene72198:CDS 35.0%
!! AAATCCATTGTTGGTGTTGT+TGG - chr5.2:17952739-17952758 None:intergenic 35.0%
!! ATCACATGGTAATGGACAAA+TGG + chr5.2:17953091-17953110 MS.gene72198:CDS 35.0%
!! GATCAGATGATGGATACAAT+TGG + chr5.2:17952817-17952836 MS.gene72198:CDS 35.0%
!! GGCTATTTCTTGGTCAAATT+TGG + chr5.2:17953987-17954006 MS.gene72198:intron 35.0%
AACGTGCCTCACATGATTTA+AGG + chr5.2:17954334-17954353 MS.gene72198:CDS 40.0%
AAGGCAAGGAAAATTGGTAC+AGG - chr5.2:17953958-17953977 None:intergenic 40.0%
AAGTAAAATGCAGGCTGATG+CGG + chr5.2:17953366-17953385 MS.gene72198:intron 40.0%
ACACAGAAACGGACATAACA+TGG - chr5.2:17954204-17954223 None:intergenic 40.0%
ACGTGCCTCACATGATTTAA+GGG + chr5.2:17954335-17954354 MS.gene72198:CDS 40.0%
ATCATCTGATCTTCGGCTTA+AGG - chr5.2:17952808-17952827 None:intergenic 40.0%
ATCATCTTCTAATGCTCTCG+TGG + chr5.2:17953022-17953041 MS.gene72198:CDS 40.0%
ATTCAACCTTCAAATGCTGC+AGG + chr5.2:17954536-17954555 MS.gene72198:CDS 40.0%
ATTTGATGAAGAGGAACCTG+AGG + chr5.2:17953217-17953236 MS.gene72198:CDS 40.0%
CAAACCAACAACACCAACAA+TGG + chr5.2:17952732-17952751 MS.gene72198:CDS 40.0%
CATATCTGTCAGTGTCATGT+CGG - chr5.2:17954110-17954129 None:intergenic 40.0%
CTGCTCAAAGCAACTACAAT+TGG + chr5.2:17952012-17952031 MS.gene72198:CDS 40.0%
GACATTGATATCCTGGATGA+TGG + chr5.2:17953624-17953643 MS.gene72198:CDS 40.0%
GACTGTCCAATCTAGACTAA+TGG - chr5.2:17952357-17952376 None:intergenic 40.0%
GATCAGTCATATGCATCACA+TGG + chr5.2:17953077-17953096 MS.gene72198:CDS 40.0%
GCATAACAGGAGAATCAAGA+AGG - chr5.2:17951396-17951415 None:intergenic 40.0%
GCTCCATTGTTTGGATTTGA+AGG - chr5.2:17954456-17954475 None:intergenic 40.0%
GCTGTGATCACAACTTATGA+GGG + chr5.2:17954357-17954376 MS.gene72198:CDS 40.0%
GGTTACAGATGGAGGAAATA+TGG + chr5.2:17953645-17953664 MS.gene72198:CDS 40.0%
GTAAGAAGAAGGAGAAACAG+GGG - chr5.2:17951341-17951360 None:intergenic 40.0%
GTGATGCATATGACTGATCA+TGG - chr5.2:17953076-17953095 None:intergenic 40.0%
GTTGTCTGAACTACAACTCT+AGG - chr5.2:17953600-17953619 None:intergenic 40.0%
GTTTGAACACTAGCAATCTC+AGG - chr5.2:17952717-17952736 None:intergenic 40.0%
TAAGAAGAAGGAGAAACAGG+GGG - chr5.2:17951340-17951359 None:intergenic 40.0%
TCATGTAACAGCAACAGCAA+TGG + chr5.2:17952598-17952617 MS.gene72198:intron 40.0%
TGCAGCATTTGAAGGTTGAA+TGG - chr5.2:17954537-17954556 None:intergenic 40.0%
TGTTATGTCCGTTTCTGTGT+CGG + chr5.2:17954204-17954223 MS.gene72198:intron 40.0%
TTAAGCCGAAGATCAGATGA+TGG + chr5.2:17952807-17952826 MS.gene72198:CDS 40.0%
TTCAACCTTCAAATGCTGCA+GGG + chr5.2:17954537-17954556 MS.gene72198:CDS 40.0%
TTGAATGGTGATTGTCCTTG+AGG - chr5.2:17954522-17954541 None:intergenic 40.0%
TTTGAAGGGTTGTTTGGCAT+TGG - chr5.2:17954441-17954460 None:intergenic 40.0%
! ATTTTGCCATCACCTACAAC+TGG + chr5.2:17951981-17952000 MS.gene72198:CDS 40.0%
!! GGGGGTGTAGACTTAAATTT+TGG - chr5.2:17951295-17951314 None:intergenic 40.0%
!! TCTTACTTTGCTATTCCTCC+TGG + chr5.2:17951355-17951374 MS.gene72198:CDS 40.0%
AAACTGCAATCATGGGAGTG+AGG - chr5.2:17953807-17953826 None:intergenic 45.0%
ACAATGGAGCAATGGCCATA+AGG + chr5.2:17954466-17954485 MS.gene72198:CDS 45.0%
AGGAACCTGAGGCTAAAAGA+TGG + chr5.2:17953228-17953247 MS.gene72198:CDS 45.0%
ATGCTAAGCCTCAATGCACA+AGG + chr5.2:17952988-17953007 MS.gene72198:CDS 45.0%
ATGGCCATTGCTCCATTGTT+TGG - chr5.2:17954465-17954484 None:intergenic 45.0%
CACAGCCCTTAAATCATGTG+AGG - chr5.2:17954343-17954362 None:intergenic 45.0%
CAGCAGAAGGAGAAGCTAAA+AGG - chr5.2:17951237-17951256 None:intergenic 45.0%
CGACATCACAACTGCAATTG+CGG - chr5.2:17953392-17953411 None:intergenic 45.0%
CGACATGACACTGACAGATA+TGG + chr5.2:17954108-17954127 MS.gene72198:intron 45.0%
CTTCGGCTTAAGGTTTGAGT+TGG - chr5.2:17952798-17952817 None:intergenic 45.0%
GAGAATCAAGAAGGTCAGCA+GGG - chr5.2:17951387-17951406 None:intergenic 45.0%
GAGTTTCTCCTTGTGCATTG+AGG - chr5.2:17952999-17953018 None:intergenic 45.0%
GGAGTGAGGAAATCCATCAT+TGG - chr5.2:17953793-17953812 None:intergenic 45.0%
GGCTGTGATCACAACTTATG+AGG + chr5.2:17954356-17954375 MS.gene72198:CDS 45.0%
GGGGAATCAGCAAATGAGAA+AGG + chr5.2:17952049-17952068 MS.gene72198:CDS 45.0%
GTGACAAAGGCAAAGAAGGA+GGG - chr5.2:17951315-17951334 None:intergenic 45.0%
TCATCTGAAGAAGCAGCAGA+AGG - chr5.2:17951250-17951269 None:intergenic 45.0%
TCCATCTGTAACCATCATCC+AGG - chr5.2:17953638-17953657 None:intergenic 45.0%
TCTCTCACAGTTCTACTTGC+AGG - chr5.2:17953576-17953595 None:intergenic 45.0%
TGACAAAGGCAAAGAAGGAG+GGG - chr5.2:17951314-17951333 None:intergenic 45.0%
TTGAGCAGAGTTCTCACCAA+AGG + chr5.2:17953168-17953187 MS.gene72198:CDS 45.0%
! AAAGCACCAGTTGTAGGTGA+TGG - chr5.2:17951990-17952009 None:intergenic 45.0%
! GACGGTCCATTAGTCTAGAT+TGG + chr5.2:17952348-17952367 MS.gene72198:intron 45.0%
! GCATTGGTCTGTTCACAGAA+TGG - chr5.2:17954425-17954444 None:intergenic 45.0%
! TCCTGGATGATGGTTACAGA+TGG + chr5.2:17953634-17953653 MS.gene72198:CDS 45.0%
! TGGATGATGGTTACAGATGG+AGG + chr5.2:17953637-17953656 MS.gene72198:CDS 45.0%
!! AAGGTTTGAGTTGGTTGCTG+TGG - chr5.2:17952789-17952808 None:intergenic 45.0%
CTGCAGGGCCAAGGAAATTA+TGG + chr5.2:17954552-17954571 MS.gene72198:CDS 50.0%
GACAAAGGCAAAGAAGGAGG+GGG - chr5.2:17951313-17951332 None:intergenic 50.0%
GCTTCCTCACTGGACAGTTA+GGG - chr5.2:17954308-17954327 None:intergenic 50.0%
GGAGAATCAAGAAGGTCAGC+AGG - chr5.2:17951388-17951407 None:intergenic 50.0%
GGAGGTGACAAAGGCAAAGA+AGG - chr5.2:17951319-17951338 None:intergenic 50.0%
GGTGACAAAGGCAAAGAAGG+AGG - chr5.2:17951316-17951335 None:intergenic 50.0%
TAAGGCCTCTTCAGAGTCAG+AGG + chr5.2:17954484-17954503 MS.gene72198:CDS 50.0%
TCTCACCAAAGGAGTCGATC+TGG + chr5.2:17953179-17953198 MS.gene72198:CDS 50.0%
TGCTTCCTCACTGGACAGTT+AGG - chr5.2:17954309-17954328 None:intergenic 50.0%
TTGCTGTGGTTGCTGGTAAC+TGG - chr5.2:17952775-17952794 None:intergenic 50.0%
! CTGACTCTGAAGAGGCCTTA+TGG - chr5.2:17954484-17954503 None:intergenic 50.0%
!! GCAGCAAAAGCACCAGTTGT+AGG - chr5.2:17951996-17952015 None:intergenic 50.0%
AGGTCAGCAGGGCTTAAACC+AGG - chr5.2:17951376-17951395 None:intergenic 55.0%
CACACCCTAACTGTCCAGTG+AGG + chr5.2:17954301-17954320 MS.gene72198:CDS 55.0%
CACCAAAGGAGTCGATCTGG+TGG + chr5.2:17953182-17953201 MS.gene72198:CDS 55.0%
CGTTCGACATGCTTCCTCAC+TGG - chr5.2:17954318-17954337 None:intergenic 55.0%
CTTCAAATGCTGCAGGGCCA+AGG + chr5.2:17954543-17954562 MS.gene72198:CDS 55.0%
CTTGGCCCTGCAGCATTTGA+AGG - chr5.2:17954545-17954564 None:intergenic 55.0%
GAAACAGGGGGAGGTGACAA+AGG - chr5.2:17951328-17951347 None:intergenic 55.0%
GAAGAAGGAGAAACAGGGGG+AGG - chr5.2:17951337-17951356 None:intergenic 55.0%
GTGGATGCAGTAACAGCAGC+AGG - chr5.2:17952107-17952126 None:intergenic 55.0%
TCAGCAGGGCTTAAACCAGG+AGG - chr5.2:17951373-17951392 None:intergenic 55.0%
! CACCACCAGATCGACTCCTT+TGG - chr5.2:17953187-17953206 None:intergenic 55.0%
! GAGTTGGTTGCTGTGGTTGC+TGG - chr5.2:17952782-17952801 None:intergenic 55.0%
! TGTCCTTGAGGTGCTTGCTG+TGG - chr5.2:17954510-17954529 None:intergenic 55.0%
! TGTGGCCTCTGACTCTGAAG+AGG - chr5.2:17954492-17954511 None:intergenic 55.0%
!! AGCAGCAGGCCCTTGTTGTT+GGG - chr5.2:17952093-17952112 None:intergenic 55.0%
AGGCCACAGCAAGCACCTCA+AGG + chr5.2:17954504-17954523 MS.gene72198:CDS 60.0%
CTTCCACTTCCACGAGCAGC+GGG - chr5.2:17954402-17954421 None:intergenic 60.0%
GCTTCCACTTCCACGAGCAG+CGG - chr5.2:17954403-17954422 None:intergenic 60.0%
TTCCACTTCCACGAGCAGCG+GGG - chr5.2:17954401-17954420 None:intergenic 60.0%
! AGGAGTCGATCTGGTGGTGC+TGG + chr5.2:17953188-17953207 MS.gene72198:CDS 60.0%
! CAGCAGCAGGCCCTTGTTGT+TGG - chr5.2:17952094-17952113 None:intergenic 60.0%
CACGAGCAGCGGGGACATCA+TGG - chr5.2:17954392-17954411 None:intergenic 65.0%
CATGATGTCCCCGCTGCTCG+TGG + chr5.2:17954390-17954409 MS.gene72198:CDS 65.0%
GTCCCCGCTGCTCGTGGAAG+TGG + chr5.2:17954396-17954415 MS.gene72198:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 17951214 17954583 17951214 ID=MS.gene72198
chr5.2 mRNA 17951214 17954583 17951214 ID=MS.gene72198.t1;Parent=MS.gene72198
chr5.2 exon 17951214 17951429 17951214 ID=MS.gene72198.t1.exon1;Parent=MS.gene72198.t1
chr5.2 CDS 17951214 17951429 17951214 ID=cds.MS.gene72198.t1;Parent=MS.gene72198.t1
chr5.2 exon 17951981 17952166 17951981 ID=MS.gene72198.t1.exon2;Parent=MS.gene72198.t1
chr5.2 CDS 17951981 17952166 17951981 ID=cds.MS.gene72198.t1;Parent=MS.gene72198.t1
chr5.2 exon 17952609 17953249 17952609 ID=MS.gene72198.t1.exon3;Parent=MS.gene72198.t1
chr5.2 CDS 17952609 17953249 17952609 ID=cds.MS.gene72198.t1;Parent=MS.gene72198.t1
chr5.2 exon 17953536 17953700 17953536 ID=MS.gene72198.t1.exon4;Parent=MS.gene72198.t1
chr5.2 CDS 17953536 17953700 17953536 ID=cds.MS.gene72198.t1;Parent=MS.gene72198.t1
chr5.2 exon 17954284 17954583 17954284 ID=MS.gene72198.t1.exon5;Parent=MS.gene72198.t1
chr5.2 CDS 17954284 17954583 17954284 ID=cds.MS.gene72198.t1;Parent=MS.gene72198.t1
Gene Sequence

>MS.gene72198

ATGTCAACAACTTTCTCTGACCTTTTAGCTTCTCCTTCTGCTGCTTCTTCAGATGATAATAACAATTCAAGGGGTGTGCCAAAATTTAAGTCTACACCCCCTCCTTCTTTGCCTTTGTCACCTCCCCCTGTTTCTCCTTCTTCTTACTTTGCTATTCCTCCTGGTTTAAGCCCTGCTGACCTTCTTGATTCTCCTGTTATGCTTAACTCTTCCAATGTTAGTTTCTTTCATTTTCTTCACTTTTTTGTTTGATATTTTTTTCAGTGTTTTTTGTTTGTTTTTGTTTTAAGAGAGTAAAGTTTTGAACTTTATTTGTTTTTTTTGACATGGGTTGTCTTTGTTTTTCATCATCTATGTTTCATGGGTTTGATGATAAACAAGTGAAGTTTGAACATGTTTTTTGGTTTTTGTTTTTGTTTTTGACAGAAAACATGTTTTTTGTTGTTGTTAAGATTGTTTGTTTTGTGTTTGGTTTTGTTGACTATGATTTTTTATGCTAAGAAAAGTTTGAACAAAGGAAAGTTTAGACTTTTTTTTCCTTTTTTTACAAGAGTTGACTAAATAATTAATTTGATTTTTTTGACATATGTTCAATGGTTTTGATGTTGAAGAAGAGCTTTTCATTTATTTTTAATCAATTGAAGGTTGAATATGAACATGCTTTAGTTTTTTTTTTTTGTTGGTGATTTTTGTTTCTTTGTCTATTTTAATGCTGTTACTGAATTTATGGGCATGTGTCAATATTGTTTTTGTTTGTTTTGATGCAGATTTTGCCATCACCTACAACTGGTGCTTTTGCTGCTCAAAGCAACTACAATTGGATGAACAATTCTGAGGGGAATCAGCAAATGAGAAAGGAAAATTTCTCTTTTCAAACCCAACAACAAGGGCCTGCTGCTGTTACTGCATCCACAACAACTTTTCAATCATCAACTGTTGGTGGAGTTCAACAAGTATGTTGTAACCAATTTTATAAGCATTTATTGCATGTTTGGATTATTTGTATGTTAAGCTGAGTTACTGTATGTGATTGTGATTTAACAAAAGCTAAGCTTTACTTTTGAGATTAAAAAAATTGAAGTTGGATTTGTTGCACTTACAAATGTCACACATTCATGTAGTCAGTACATTATTGACGGTCCATTAGTCTAGATTGGACAGTCTAGATTGCAAGTTTAGAATTTTGCGATTTAATATTTAATCAAAATGCGCTTTCTTTCTGCACTGTTTGATCTTGATCCAATGATCATCGATGTTTTGAAGTTATGACTAGAACTAATCCAAATCCAACAAAAATAATGTGATCAACTTTTTGAACCTATGTCTTTTATCTTATTGGTTTTTGAAATGAAAAAGTTATTTTCTCTAAAAATGTTCAACTTTTTCATGTAACAGCAACAGCAATGGAGTTATCAAGAGAACACAAATCAGAATGCTTTTTCTTCTGAAAAGAATATGATACAAACTGAAAACAACAACTCTTCAATGCAGAGTTTTTCACCTGAGATTGCTAGTGTTCAAACCAACAACACCAACAATGGATTTCAATCAGACTACTCCAGTTACCAGCAACCACAGCAACCAACTCAAACCTTAAGCCGAAGATCAGATGATGGATACAATTGGCGAAAATATGGACAAAAGCAAGTTAAGGGAAGTGAAAATCCGAGAAGTTACTACAAATGCACTTACCCTAACTGTCCTACTAAGAAGAAAGTTGAGAGATCAATTGAGGGACAAGTTACTGAGATAGTTTATAAGGGTACTCATAATCATGCTAAGCCTCAATGCACAAGGAGAAACTCGTCATCATCTTCTAATGCTCTCGTGGTTGTTCCTGTTAATCCAATCAATGAAATCCATGATCAGTCATATGCATCACATGGTAATGGACAAATGGATTCTGCTGCTACTCCTGAGAATTCTTCAATATCAATTGGAGGTGATGATGATTTTGAGCAGAGTTCTCACCAAAGGAGTCGATCTGGTGGTGCTGGTGATGAATTTGATGAAGAGGAACCTGAGGCTAAAAGATGGTAAATTTTTTATTTTATTTCAACACTTGGCACCATAAATATGATTCAATGTTTTGTTGATGTTCTTAAATTGCTGATGCGGTCGCAATTTTATTATGTCACGAGCCTTTATGTTGAAGTAAAATGCAGGCTGATGCGGCCGCAATTGCAGTTGTGATGTCGTTGCTCATATATTATTATATTGTGGTTGTGGACTGCAATTTAAAACTACTATGGTCTTGTCTTGATATATTCATTTATGTAGGTTTTATTTCATGGCTAATTTAAGTTTACATAAAATTTTCAGGAAAAATGAAGGTGAAAATGAGGGTATATCAGCACAACCTGCAAGTAGAACTGTGAGAGAACCTAGAGTTGTAGTTCAGACAACAAGTGACATTGATATCCTGGATGATGGTTACAGATGGAGGAAATATGGACAGAAAGTTGTTAAGGGAAATCCAAATCCAAGGTAAAAAAATAACTAACTTTATGTTTACTTCTTGAAATTTATACAGTTTTGAAGTTCTTTTAAAAAGTACTACTAGTTAATTTGAGTATCCAATGATGGATTTCCTCACTCCCATGATTGCAGTTTACAAATATTACCTAGTCAAATGTGGTAAAAAGTTACAATTGTGTAATGAATTGTATTTGTTCTCTATCTGTTTTAGGTGCTTTAGCATTATTGCTTGTTTCTTTTTGGAAACTCTACTATAGATTAAACCTGTACCAATTTTCCTTGCCTTTTCTAATTTGGCTATTTCTTGGTCAAATTTGGTAACTATGATATTCTCAAATTTGCATGCTATCTAGAAAAAGAATAGTAGTTCTAGACTATATATCACATACACTTCAAATTGAACATGTGTGTGACGCCGACATGACACTGACAGATATGGTTACATATAGTTATTTCATTTTCTCAAATTATTATCAACGTTGACTTGTTGTTAGTGTCTGTGTCTGTGTCCATGTTATGTCCGTTTCTGTGTCGGTGTTTTATATGTTCTAGATTGTGTTATCTAATTTTGTGTTTAATTTATGACTTGTAGGAGTTACTACAAATGCACACACCCTAACTGTCCAGTGAGGAAGCATGTCGAACGTGCCTCACATGATTTAAGGGCTGTGATCACAACTTATGAGGGAAAGCATAACCATGATGTCCCCGCTGCTCGTGGAAGTGGAAGCCATTCTGTGAACAGACCAATGCCAAACAACCCTTCAAATCCAAACAATGGAGCAATGGCCATAAGGCCTCTTCAGAGTCAGAGGCCACAGCAAGCACCTCAAGGACAATCACCATTCAACCTTCAAATGCTGCAGGGCCAAGGAAATTATGGATTCTCAAG
Protein sequence

>MS.gene72198.t1

MSTTFSDLLASPSAASSDDNNNSRGVPKFKSTPPPSLPLSPPPVSPSSYFAIPPGLSPADLLDSPVMLNSSNILPSPTTGAFAAQSNYNWMNNSEGNQQMRKENFSFQTQQQGPAAVTASTTTFQSSTVGGVQQQQQWSYQENTNQNAFSSEKNMIQTENNNSSMQSFSPEIASVQTNNTNNGFQSDYSSYQQPQQPTQTLSRRSDDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSIEGQVTEIVYKGTHNHAKPQCTRRNSSSSSNALVVVPVNPINEIHDQSYASHGNGQMDSAATPENSSISIGGDDDFEQSSHQRSRSGGAGDEFDEEEPEAKRWKNEGENEGISAQPASRTVREPRVVVQTTSDIDILDDGYRWRKYGQKVVKGNPNPRSYYKCTHPNCPVRKHVERASHDLRAVITTYEGKHNHDVPAARGSGSHSVNRPMPNNPSNPNNGAMAIRPLQSQRPQQAPQGQSPFNLQMLQGQGNYGFS