Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72211.t1 | XP_003615883.1 | 98.8 | 644 | 8 | 0 | 1 | 644 | 1 | 644 | 0.00E+00 | 1278.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72211.t1 | Q9FGH9 | 69.1 | 638 | 176 | 7 | 1 | 635 | 1 | 620 | 6.9e-257 | 887.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72211.t1 | G7JZR5 | 98.8 | 644 | 8 | 0 | 1 | 644 | 1 | 644 | 0.0e+00 | 1278.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04915 | MS.gene72211 | 0.816423 | 5.57E-52 | -1.69E-46 |
MS.gene04917 | MS.gene72211 | 0.819127 | 1.37E-52 | -1.69E-46 |
MS.gene04998 | MS.gene72211 | 0.823577 | 1.29E-53 | -1.69E-46 |
MS.gene050359 | MS.gene72211 | 0.827384 | 1.61E-54 | -1.69E-46 |
MS.gene050646 | MS.gene72211 | 0.847686 | 9.88E-60 | -1.69E-46 |
MS.gene050654 | MS.gene72211 | 0.810296 | 1.24E-50 | -1.69E-46 |
MS.gene051184 | MS.gene72211 | 0.823762 | 1.16E-53 | -1.69E-46 |
MS.gene053879 | MS.gene72211 | 0.808609 | 2.85E-50 | -1.69E-46 |
MS.gene054892 | MS.gene72211 | 0.828402 | 9.17E-55 | -1.69E-46 |
MS.gene054893 | MS.gene72211 | 0.830878 | 2.29E-55 | -1.69E-46 |
MS.gene058429 | MS.gene72211 | 0.820107 | 8.17E-53 | -1.69E-46 |
MS.gene059007 | MS.gene72211 | 0.813956 | 1.97E-51 | -1.69E-46 |
MS.gene060259 | MS.gene72211 | 0.871211 | 8.12E-67 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72211.t1 | MTR_5g073450 | 98.758 | 644 | 8 | 0 | 1 | 644 | 1 | 644 | 0.0 | 1323 |
MS.gene72211.t1 | MTR_3g031130 | 69.612 | 645 | 176 | 5 | 1 | 642 | 1 | 628 | 0.0 | 870 |
MS.gene72211.t1 | MTR_5g073460 | 64.574 | 446 | 156 | 2 | 194 | 637 | 251 | 696 | 0.0 | 589 |
MS.gene72211.t1 | MTR_5g073480 | 57.666 | 437 | 119 | 5 | 194 | 627 | 252 | 625 | 2.68e-165 | 487 |
MS.gene72211.t1 | MTR_5g073620 | 62.575 | 334 | 105 | 2 | 194 | 525 | 280 | 595 | 1.49e-131 | 413 |
MS.gene72211.t1 | MTR_5g073620 | 38.760 | 258 | 136 | 4 | 378 | 634 | 833 | 1069 | 3.94e-41 | 161 |
MS.gene72211.t1 | MTR_8g021330 | 41.667 | 456 | 254 | 5 | 201 | 644 | 161 | 616 | 1.62e-123 | 379 |
MS.gene72211.t1 | MTR_4g103540 | 34.143 | 659 | 394 | 10 | 6 | 634 | 33 | 681 | 3.35e-117 | 365 |
MS.gene72211.t1 | MTR_6g033310 | 36.746 | 547 | 309 | 10 | 114 | 644 | 212 | 737 | 9.39e-114 | 358 |
MS.gene72211.t1 | MTR_7g013770 | 33.683 | 668 | 388 | 14 | 6 | 634 | 16 | 667 | 4.22e-112 | 352 |
MS.gene72211.t1 | MTR_7g026630 | 37.989 | 537 | 308 | 10 | 119 | 643 | 137 | 660 | 2.19e-111 | 349 |
MS.gene72211.t1 | MTR_1g057560 | 32.647 | 631 | 395 | 9 | 22 | 641 | 22 | 633 | 2.30e-108 | 340 |
MS.gene72211.t1 | MTR_5g074130 | 44.643 | 448 | 226 | 9 | 190 | 631 | 242 | 673 | 5.32e-108 | 343 |
MS.gene72211.t1 | MTR_1g090620 | 31.125 | 649 | 396 | 11 | 22 | 641 | 23 | 649 | 8.96e-106 | 334 |
MS.gene72211.t1 | MTR_1g117090 | 33.612 | 598 | 335 | 12 | 91 | 642 | 96 | 677 | 2.67e-96 | 310 |
MS.gene72211.t1 | MTR_5g073920 | 39.644 | 449 | 237 | 9 | 196 | 637 | 242 | 663 | 3.76e-93 | 303 |
MS.gene72211.t1 | MTR_3g025900 | 31.472 | 591 | 355 | 13 | 70 | 637 | 49 | 612 | 1.68e-88 | 288 |
MS.gene72211.t1 | MTR_3g464010 | 39.732 | 448 | 242 | 11 | 196 | 635 | 243 | 670 | 1.09e-83 | 277 |
MS.gene72211.t1 | MTR_5g093530 | 43.597 | 367 | 171 | 5 | 267 | 631 | 238 | 570 | 2.63e-83 | 273 |
MS.gene72211.t1 | MTR_2g096230 | 28.933 | 553 | 355 | 9 | 94 | 640 | 68 | 588 | 2.70e-82 | 271 |
MS.gene72211.t1 | MTR_4g062330 | 30.853 | 551 | 348 | 11 | 94 | 631 | 72 | 602 | 1.22e-79 | 265 |
MS.gene72211.t1 | MTR_5g073900 | 44.330 | 388 | 170 | 10 | 219 | 603 | 1 | 345 | 1.13e-76 | 249 |
MS.gene72211.t1 | MTR_5g073770 | 64.550 | 189 | 65 | 1 | 192 | 378 | 191 | 379 | 2.10e-74 | 244 |
MS.gene72211.t1 | MTR_1g067480 | 30.250 | 519 | 332 | 11 | 125 | 631 | 100 | 600 | 3.26e-72 | 244 |
MS.gene72211.t1 | MTR_1g067460 | 28.571 | 518 | 343 | 9 | 125 | 631 | 98 | 599 | 1.66e-66 | 229 |
MS.gene72211.t1 | MTR_5g073490 | 54.438 | 169 | 62 | 1 | 467 | 635 | 3 | 156 | 1.34e-57 | 191 |
MS.gene72211.t1 | MTR_5g073820 | 42.321 | 293 | 76 | 5 | 192 | 481 | 230 | 432 | 2.57e-52 | 187 |
MS.gene72211.t1 | MTR_5g073960 | 49.758 | 207 | 76 | 6 | 177 | 378 | 233 | 416 | 5.19e-45 | 166 |
MS.gene72211.t1 | MTR_5g073780 | 39.669 | 242 | 124 | 4 | 394 | 634 | 4 | 224 | 2.77e-44 | 158 |
MS.gene72211.t1 | MTR_1g009620 | 26.296 | 521 | 333 | 10 | 131 | 642 | 184 | 662 | 6.55e-39 | 153 |
MS.gene72211.t1 | MTR_5g074190 | 34.333 | 300 | 119 | 8 | 336 | 632 | 184 | 408 | 1.01e-32 | 132 |
MS.gene72211.t1 | MTR_5g073650 | 38.776 | 196 | 78 | 3 | 202 | 396 | 173 | 327 | 3.34e-30 | 122 |
MS.gene72211.t1 | MTR_1g017910 | 25.901 | 444 | 270 | 12 | 197 | 602 | 236 | 658 | 1.28e-29 | 125 |
MS.gene72211.t1 | MTR_5g073810 | 38.776 | 196 | 78 | 3 | 202 | 396 | 275 | 429 | 5.32e-28 | 117 |
MS.gene72211.t1 | MTR_4g008260 | 25.113 | 442 | 296 | 12 | 205 | 632 | 220 | 640 | 3.52e-26 | 114 |
MS.gene72211.t1 | MTR_0229s0040 | 31.746 | 189 | 123 | 2 | 458 | 642 | 31 | 217 | 4.38e-23 | 99.0 |
MS.gene72211.t1 | MTR_4g019260 | 45.946 | 74 | 34 | 1 | 267 | 340 | 2 | 69 | 3.96e-13 | 65.1 |
MS.gene72211.t1 | MTR_3g031110 | 63.333 | 60 | 19 | 1 | 279 | 335 | 17 | 76 | 1.49e-12 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene72211.t1 | AT5G58430 | 69.436 | 638 | 174 | 7 | 1 | 635 | 1 | 620 | 0.0 | 892 |
MS.gene72211.t1 | AT1G07000 | 50.078 | 645 | 265 | 10 | 1 | 635 | 1 | 598 | 0.0 | 635 |
MS.gene72211.t1 | AT5G50380 | 35.000 | 660 | 386 | 11 | 7 | 634 | 24 | 672 | 1.09e-120 | 374 |
MS.gene72211.t1 | AT5G13990 | 38.330 | 587 | 328 | 14 | 74 | 643 | 124 | 693 | 5.26e-120 | 373 |
MS.gene72211.t1 | AT3G14090 | 36.280 | 543 | 317 | 7 | 126 | 643 | 85 | 623 | 6.03e-118 | 365 |
MS.gene72211.t1 | AT1G72470 | 41.394 | 459 | 250 | 7 | 201 | 644 | 178 | 632 | 5.95e-117 | 363 |
MS.gene72211.t1 | AT5G13150 | 36.752 | 585 | 308 | 13 | 91 | 643 | 99 | 653 | 3.18e-113 | 354 |
MS.gene72211.t1 | AT1G54090 | 39.735 | 453 | 260 | 6 | 201 | 642 | 170 | 620 | 2.97e-112 | 350 |
MS.gene72211.t1 | AT5G03540 | 32.808 | 634 | 383 | 9 | 22 | 635 | 22 | 632 | 5.84e-109 | 342 |
MS.gene72211.t1 | AT5G03540 | 32.675 | 658 | 390 | 11 | 22 | 641 | 22 | 664 | 2.16e-107 | 339 |
MS.gene72211.t1 | AT5G03540 | 35.902 | 532 | 305 | 7 | 119 | 635 | 7 | 517 | 4.19e-106 | 331 |
MS.gene72211.t1 | AT5G52340 | 30.941 | 627 | 409 | 6 | 22 | 641 | 22 | 631 | 6.55e-106 | 334 |
MS.gene72211.t1 | AT3G29400 | 32.340 | 671 | 403 | 16 | 4 | 643 | 7 | 657 | 2.70e-94 | 305 |
MS.gene72211.t1 | AT5G52350 | 33.909 | 463 | 291 | 4 | 176 | 635 | 129 | 579 | 2.89e-86 | 281 |
MS.gene72211.t1 | AT2G39380 | 28.261 | 552 | 369 | 7 | 94 | 634 | 76 | 611 | 2.16e-77 | 259 |
MS.gene72211.t1 | AT5G59730 | 28.783 | 608 | 367 | 14 | 63 | 634 | 22 | 599 | 4.88e-75 | 253 |
MS.gene72211.t1 | AT5G59730 | 28.783 | 608 | 367 | 14 | 63 | 634 | 22 | 599 | 6.81e-75 | 252 |
MS.gene72211.t1 | AT5G61010 | 27.134 | 656 | 412 | 15 | 15 | 643 | 23 | 639 | 8.17e-73 | 247 |
MS.gene72211.t1 | AT5G61010 | 27.134 | 656 | 412 | 15 | 15 | 643 | 23 | 639 | 8.17e-73 | 247 |
MS.gene72211.t1 | AT3G55150 | 28.545 | 550 | 370 | 8 | 94 | 634 | 76 | 611 | 1.35e-72 | 246 |
MS.gene72211.t1 | AT1G07725 | 27.799 | 536 | 320 | 9 | 125 | 633 | 96 | 591 | 3.30e-72 | 244 |
MS.gene72211.t1 | AT3G09530 | 26.547 | 614 | 415 | 9 | 35 | 633 | 10 | 602 | 1.14e-69 | 238 |
MS.gene72211.t1 | AT2G28640 | 28.489 | 523 | 330 | 8 | 125 | 637 | 94 | 582 | 3.67e-68 | 234 |
MS.gene72211.t1 | AT3G09520 | 28.164 | 561 | 363 | 10 | 89 | 632 | 68 | 605 | 1.52e-66 | 230 |
MS.gene72211.t1 | AT2G28650 | 28.842 | 423 | 278 | 5 | 212 | 631 | 152 | 554 | 3.69e-53 | 192 |
MS.gene72211.t1 | AT4G31540 | 25.775 | 516 | 335 | 9 | 135 | 642 | 190 | 665 | 9.07e-40 | 155 |
MS.gene72211.t1 | AT1G51640 | 24.494 | 445 | 301 | 10 | 209 | 632 | 196 | 626 | 1.62e-25 | 112 |
Find 139 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGCAGGGTCCTTGTAAATTT+TGG | 0.099808 | 5.2:-61947003 | None:intergenic |
CAGCCATATTGTTATTATTA+TGG | 0.186970 | 5.2:-61945657 | None:intergenic |
TTTCATCTGATCATCCAATT+TGG | 0.193703 | 5.2:+61945839 | MS.gene72211:CDS |
CGAATGGTTGCCGGTGGATT+TGG | 0.193761 | 5.2:+61946246 | MS.gene72211:CDS |
TCCGGCTAAGGCGGGTGTTC+CGG | 0.217088 | 5.2:+61946770 | MS.gene72211:CDS |
CCGGCTAAGGCGGGTGTTCC+GGG | 0.220217 | 5.2:+61946771 | MS.gene72211:CDS |
GAAATTGAAAGATGGATTAA+AGG | 0.249788 | 5.2:+61946396 | MS.gene72211:CDS |
AAAACTCAATGATTTGTTTC+AGG | 0.259634 | 5.2:+61947469 | MS.gene72211:CDS |
AAAGCTGAAGATAGTGAATT+AGG | 0.282933 | 5.2:+61947071 | MS.gene72211:CDS |
AGAGCGGTTGTTTAAAATTC+TGG | 0.290101 | 5.2:+61946587 | MS.gene72211:CDS |
TCCAAGAGCTTTCACAGCTT+TGG | 0.295611 | 5.2:+61945774 | MS.gene72211:CDS |
AGGAGAGTTTATCGAGATTA+GGG | 0.303056 | 5.2:+61946316 | MS.gene72211:CDS |
AACATTGCGTGACCTAATTT+CGG | 0.312781 | 5.2:+61946620 | MS.gene72211:CDS |
AATGGATCAATGCAACATAA+TGG | 0.314221 | 5.2:+61947209 | MS.gene72211:CDS |
ACAACTCAAATTCCGAAATT+AGG | 0.319266 | 5.2:-61946632 | None:intergenic |
GCTGATAAATATATTAAGTA+TGG | 0.333613 | 5.2:+61947428 | MS.gene72211:CDS |
ATGGATCAATGCAACATAAT+GGG | 0.338830 | 5.2:+61947210 | MS.gene72211:CDS |
TACAGATTTAGCTTCGCTTT+CGG | 0.343027 | 5.2:-61947514 | None:intergenic |
TATCTTTGATGAACAACTTA+AGG | 0.343532 | 5.2:+61947313 | MS.gene72211:CDS |
AGCTCATGGAATAAGGTGTT+TGG | 0.350167 | 5.2:+61947167 | MS.gene72211:CDS |
TCAGCAGAGTCTGCCCAAAT+TGG | 0.354285 | 5.2:-61945853 | None:intergenic |
TTCATCACGTAACGCGTAAT+CGG | 0.355133 | 5.2:-61946807 | None:intergenic |
TCAAAGAAGCTCATGGAATA+AGG | 0.361831 | 5.2:+61947160 | MS.gene72211:CDS |
GAATGGTTGCCGGTGGATTT+GGG | 0.370483 | 5.2:+61946247 | MS.gene72211:CDS |
TTCGTCTTTGTCGGTGCAAA+TGG | 0.370914 | 5.2:+61946938 | MS.gene72211:CDS |
AAGGCGGGTGTTCCGGGTGG+TGG | 0.371274 | 5.2:+61946777 | MS.gene72211:CDS |
GAGGAGAGTTTATCGAGATT+AGG | 0.373650 | 5.2:+61946315 | MS.gene72211:CDS |
TTCATCTGATCATCCAATTT+GGG | 0.376514 | 5.2:+61945840 | MS.gene72211:CDS |
AGGCCATAATAATAACAATA+TGG | 0.381566 | 5.2:+61945654 | MS.gene72211:CDS |
AATTCACCGAATCGCTGTTC+CGG | 0.381882 | 5.2:-61946074 | None:intergenic |
TAGTTGCCGGAGAGAATTCT+TGG | 0.391094 | 5.2:+61946293 | MS.gene72211:CDS |
GAGCAAGTGTTTGAAGACTA+TGG | 0.392698 | 5.2:+61946867 | MS.gene72211:CDS |
GGTGCAAATGGATTGGATTA+TGG | 0.395788 | 5.2:+61946950 | MS.gene72211:CDS |
GCTCATGGAATAAGGTGTTT+GGG | 0.397422 | 5.2:+61947168 | MS.gene72211:CDS |
TGCATCCTATCATCCATCTT+AGG | 0.400142 | 5.2:-61946909 | None:intergenic |
GCATTCATCTTCGTCTTTGT+CGG | 0.400996 | 5.2:+61946929 | MS.gene72211:CDS |
ATTACTATATGGAAGAGATT+GGG | 0.401127 | 5.2:+61946696 | MS.gene72211:CDS |
CTTTGTCGGTGCAAATGGAT+TGG | 0.403105 | 5.2:+61946943 | MS.gene72211:CDS |
TCCGTTACCGGCATCGCAAC+CGG | 0.408585 | 5.2:-61946159 | None:intergenic |
ACAATTTCGTAATCCGTTAC+CGG | 0.411017 | 5.2:-61946171 | None:intergenic |
AGCTTCTTTGATACTGCATA+TGG | 0.412400 | 5.2:-61947148 | None:intergenic |
TTAGCTTCGCTTTCGGCTAC+CGG | 0.424223 | 5.2:-61947507 | None:intergenic |
GGAATGAAGCAATTACTATA+TGG | 0.424616 | 5.2:+61946685 | MS.gene72211:CDS |
AAACTCAATGATTTGTTTCA+GGG | 0.430768 | 5.2:+61947470 | MS.gene72211:CDS |
TCCAAAGCTGTGAAAGCTCT+TGG | 0.431111 | 5.2:-61945775 | None:intergenic |
AATTACTATATGGAAGAGAT+TGG | 0.434289 | 5.2:+61946695 | MS.gene72211:CDS |
ATCGCGAAACGAATGGTTGC+CGG | 0.437422 | 5.2:+61946237 | MS.gene72211:CDS |
CGCATGTGTACAGTAGTTGC+CGG | 0.441409 | 5.2:+61946280 | MS.gene72211:CDS |
GAATTTGATTCGAAGGGATC+CGG | 0.454380 | 5.2:+61946752 | MS.gene72211:CDS |
ATTATCCTAAGATGGATGAT+AGG | 0.458844 | 5.2:+61946904 | MS.gene72211:CDS |
AGGTGAAGAGGATCTGATTC+CGG | 0.459732 | 5.2:+61946140 | MS.gene72211:CDS |
CCCGGAACACCCGCCTTAGC+CGG | 0.464875 | 5.2:-61946771 | None:intergenic |
TCTGATTCCGGTTGCGATGC+CGG | 0.465064 | 5.2:+61946152 | MS.gene72211:CDS |
TTTCAGAATGTTGCTGAAGT+TGG | 0.466451 | 5.2:+61947398 | MS.gene72211:CDS |
GATTCGAAGGGATCCGGCTA+AGG | 0.472839 | 5.2:+61946758 | MS.gene72211:CDS |
CAGGGAAGCAGCGGATCAAC+CGG | 0.475342 | 5.2:+61947488 | MS.gene72211:CDS |
TTCGCCGATGCGGTCGCGAT+TGG | 0.475906 | 5.2:+61946552 | MS.gene72211:CDS |
GGATGAGTTTCGTTCTCTCA+TGG | 0.480828 | 5.2:+61946014 | MS.gene72211:CDS |
CAAATCTTCTCAAATTTCGA+TGG | 0.480862 | 5.2:+61945691 | MS.gene72211:CDS |
CGGTGTTTGATGATTTATGC+AGG | 0.484441 | 5.2:+61947273 | MS.gene72211:CDS |
TTGAAGATGAAATTGAAAGA+TGG | 0.490489 | 5.2:+61946388 | MS.gene72211:CDS |
ATTGAAGGATTATCCTAAGA+TGG | 0.495216 | 5.2:+61946896 | MS.gene72211:CDS |
ACCGTTTGATTCTGAAGAAG+AGG | 0.499752 | 5.2:+61946098 | MS.gene72211:CDS |
GCCGTACCGGAACAGCGATT+CGG | 0.500658 | 5.2:+61946068 | MS.gene72211:CDS |
TCCGGTTGCGATGCCGGTAA+CGG | 0.500704 | 5.2:+61946158 | MS.gene72211:CDS |
ATCTTAGGATAATCCTTCAA+TGG | 0.501748 | 5.2:-61946894 | None:intergenic |
ATCAGTATAGTGTGTCTTTG+AGG | 0.503425 | 5.2:+61946664 | MS.gene72211:CDS |
TCCTCTTCTTCAGAATCAAA+CGG | 0.503787 | 5.2:-61946099 | None:intergenic |
TTGACTTAACGCCGCCGTAC+CGG | 0.507619 | 5.2:+61946055 | MS.gene72211:CDS |
AAGAAAACATAGCACAAAGC+AGG | 0.512116 | 5.2:-61947020 | None:intergenic |
TTCGTGCTGCGTGTAGGTCT+AGG | 0.512500 | 5.2:+61946835 | MS.gene72211:CDS |
GCAATGAAGTTTGCATAAGC+TGG | 0.514549 | 5.2:-61947371 | None:intergenic |
AGTTGGAGAATTTGATTCGA+AGG | 0.519933 | 5.2:+61946745 | MS.gene72211:CDS |
ACACGCTATGTTCCGTCTTG+AGG | 0.520932 | 5.2:+61945993 | MS.gene72211:CDS |
TAAACAACCGCTCTGGCGAC+CGG | 0.521805 | 5.2:-61946578 | None:intergenic |
AGTGAGAGATTCGGCGGTCG+AGG | 0.522517 | 5.2:-61945813 | None:intergenic |
ACCGAATCGCTGTTCCGGTA+CGG | 0.526372 | 5.2:-61946069 | None:intergenic |
TGAGAAAGTCGCTGCGGTCG+AGG | 0.527276 | 5.2:+61945738 | MS.gene72211:CDS |
CGAAGGGATCCGGCTAAGGC+GGG | 0.530606 | 5.2:+61946762 | MS.gene72211:CDS |
TCGAAGGGATCCGGCTAAGG+CGG | 0.531883 | 5.2:+61946761 | MS.gene72211:CDS |
TGATTCTGAAGAAGAGGATG+AGG | 0.534419 | 5.2:+61946104 | MS.gene72211:CDS |
TATGCAGGGTTCAATCTACA+TGG | 0.536987 | 5.2:+61947288 | MS.gene72211:CDS |
GTTGGAGAATTTGATTCGAA+GGG | 0.538931 | 5.2:+61946746 | MS.gene72211:CDS |
ATGCGGTCGCGATTGGAAGC+CGG | 0.541344 | 5.2:+61946559 | MS.gene72211:CDS |
TGCAGTATCAAAGAAGCTCA+TGG | 0.545663 | 5.2:+61947153 | MS.gene72211:CDS |
TCTTTCATGGAGGTTTGTAG+AGG | 0.546182 | 5.2:+61946507 | MS.gene72211:CDS |
TGTTCACAAAATGCAGTGGC+AGG | 0.547500 | 5.2:+61946362 | MS.gene72211:CDS |
GAAGAGGATGAGGAAATTGA+CGG | 0.549221 | 5.2:+61946114 | MS.gene72211:CDS |
TCACGAGATCGCGAAACGAA+TGG | 0.552800 | 5.2:+61946230 | MS.gene72211:CDS |
TTACTATATGGAAGAGATTG+GGG | 0.558787 | 5.2:+61946697 | MS.gene72211:CDS |
TGGATTTATCACCGGTGAGG+TGG | 0.560283 | 5.2:-61945933 | None:intergenic |
AGACTATGGACATCCATTGA+AGG | 0.560704 | 5.2:+61946881 | MS.gene72211:CDS |
ATGAAACGTAGTGAGAGATT+CGG | 0.561154 | 5.2:-61945822 | None:intergenic |
ATTACCTTCGTGCTGCGTGT+AGG | 0.569605 | 5.2:+61946829 | MS.gene72211:CDS |
TCGCATAATCGTCTCTCACT+CGG | 0.570608 | 5.2:-61946447 | None:intergenic |
GCTTCCAATCGCGACCGCAT+CGG | 0.571514 | 5.2:-61946556 | None:intergenic |
AATTGACGGTGGAGGTGAAG+AGG | 0.582467 | 5.2:+61946128 | MS.gene72211:CDS |
AGCTAAATCCAAAATTTACA+AGG | 0.584221 | 5.2:+61946995 | MS.gene72211:CDS |
GTTGTTGAATTTCGCCGATG+CGG | 0.585215 | 5.2:+61946542 | MS.gene72211:CDS |
GCGTGCAAGACACGTGGCGA+TGG | 0.587844 | 5.2:-61945953 | None:intergenic |
GATGAGGAAATTGACGGTGG+AGG | 0.590732 | 5.2:+61946120 | MS.gene72211:CDS |
TCTCCTCCAAGAATTCTCTC+CGG | 0.592000 | 5.2:-61946299 | None:intergenic |
GAGGATGAGGAAATTGACGG+TGG | 0.597078 | 5.2:+61946117 | MS.gene72211:CDS |
CACGTGTCTTGCACGCGCTG+AGG | 0.603781 | 5.2:+61945960 | MS.gene72211:CDS |
TTGCCGGAGAGAATTCTTGG+AGG | 0.606882 | 5.2:+61946296 | MS.gene72211:CDS |
GCAGAGTGGAACCACCTCAC+CGG | 0.613195 | 5.2:+61945922 | MS.gene72211:CDS |
GGTGTTTGATGATTTATGCA+GGG | 0.615103 | 5.2:+61947274 | MS.gene72211:CDS |
ACACTCTTTCCCAAATCCAC+CGG | 0.617998 | 5.2:-61946256 | None:intergenic |
CTTATGCAAACTTCATTGCG+AGG | 0.624221 | 5.2:+61947375 | MS.gene72211:CDS |
TGGATCAATGCAACATAATG+GGG | 0.624314 | 5.2:+61947211 | MS.gene72211:CDS |
AGATCGTTAATCGTCGCCGA+CGG | 0.628141 | 5.2:-61946207 | None:intergenic |
TTTCGATGGAAGATTCTCGA+AGG | 0.631139 | 5.2:+61945705 | MS.gene72211:CDS |
AGAAAACATAGCACAAAGCA+GGG | 0.634160 | 5.2:-61947019 | None:intergenic |
CGTGGCGATGGATTTATCAC+CGG | 0.638141 | 5.2:-61945941 | None:intergenic |
CTCAGCGCGTGCAAGACACG+TGG | 0.639873 | 5.2:-61945959 | None:intergenic |
TTGGAAGCCGGTCGCCAGAG+CGG | 0.641608 | 5.2:+61946571 | MS.gene72211:CDS |
GCTAAGGCGGGTGTTCCGGG+TGG | 0.643592 | 5.2:+61946774 | MS.gene72211:CDS |
GCGAAACGAATGGTTGCCGG+TGG | 0.645091 | 5.2:+61946240 | MS.gene72211:CDS |
TAGTAGCTTCTGTTGCAGAG+TGG | 0.651348 | 5.2:+61945908 | MS.gene72211:CDS |
AACGAAACTCATCCTCAAGA+CGG | 0.651495 | 5.2:-61946005 | None:intergenic |
GATTTGTTTCAGGGAAGCAG+CGG | 0.656597 | 5.2:+61947479 | MS.gene72211:CDS |
CGTTCTCTCATGGAACGCGG+TGG | 0.656643 | 5.2:+61946024 | MS.gene72211:CDS |
TGTGATCGATGCGTTACCGT+CGG | 0.659737 | 5.2:+61946191 | MS.gene72211:CDS |
CGATGGATTTATCACCGGTG+AGG | 0.664178 | 5.2:-61945936 | None:intergenic |
AGAAGAGAAATTACTCGCTG+TGG | 0.664906 | 5.2:+61945609 | MS.gene72211:CDS |
ATCGGATGTAGTCCACCACC+CGG | 0.665264 | 5.2:-61946789 | None:intergenic |
GTGTAGGTCTAGGCAGACAT+TGG | 0.668930 | 5.2:+61946845 | MS.gene72211:CDS |
TGGCAACAAGAGTTTCTCGA+TGG | 0.669952 | 5.2:-61947351 | None:intergenic |
ATATATTAAGTATGGAACAG+AGG | 0.672378 | 5.2:+61947436 | MS.gene72211:CDS |
AGAAGCTACTAAGTCGTCAA+CGG | 0.673884 | 5.2:-61945896 | None:intergenic |
TTTCGTTCTCTCATGGAACG+CGG | 0.674207 | 5.2:+61946021 | MS.gene72211:CDS |
GAATCGCTGTTCCGGTACGG+CGG | 0.676085 | 5.2:-61946066 | None:intergenic |
AAGATGTTCACAAAATGCAG+TGG | 0.676259 | 5.2:+61946358 | MS.gene72211:CDS |
AACGGCGTCGAGAAAAGCAG+CGG | 0.676927 | 5.2:-61945878 | None:intergenic |
TACTATATGGAAGAGATTGG+GGG | 0.699675 | 5.2:+61946698 | MS.gene72211:CDS |
AAACGTAGTGAGAGATTCGG+CGG | 0.706086 | 5.2:-61945819 | None:intergenic |
GAAGCTGAAATCGTTCAACA+CGG | 0.721492 | 5.2:+61947253 | MS.gene72211:CDS |
TCTTTCTGAGAAAGTCGCTG+CGG | 0.726564 | 5.2:+61945732 | MS.gene72211:CDS |
TAGACCTACACGCAGCACGA+AGG | 0.738639 | 5.2:-61946833 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GCTGATAAATATATTAAGTA+TGG | + | chr5.2:61947428-61947447 | MS.gene72211:CDS | 20.0% |
! | AATTACTATATGGAAGAGAT+TGG | + | chr5.2:61946695-61946714 | MS.gene72211:CDS | 25.0% |
! | AGCTAAATCCAAAATTTACA+AGG | + | chr5.2:61946995-61947014 | MS.gene72211:CDS | 25.0% |
! | AGGCCATAATAATAACAATA+TGG | + | chr5.2:61945654-61945673 | MS.gene72211:CDS | 25.0% |
! | ATATATTAAGTATGGAACAG+AGG | + | chr5.2:61947436-61947455 | MS.gene72211:CDS | 25.0% |
! | ATTACTATATGGAAGAGATT+GGG | + | chr5.2:61946696-61946715 | MS.gene72211:CDS | 25.0% |
! | TATCTTTGATGAACAACTTA+AGG | + | chr5.2:61947313-61947332 | MS.gene72211:CDS | 25.0% |
! | TTGAAGATGAAATTGAAAGA+TGG | + | chr5.2:61946388-61946407 | MS.gene72211:CDS | 25.0% |
!! | CAGCCATATTGTTATTATTA+TGG | - | chr5.2:61945660-61945679 | None:intergenic | 25.0% |
!! | TTTTCTTGATGAATAATTGC+AGG | + | chr5.2:61947036-61947055 | MS.gene72211:CDS | 25.0% |
!!! | AAAACTCAATGATTTGTTTC+AGG | + | chr5.2:61947469-61947488 | MS.gene72211:CDS | 25.0% |
!!! | AAACTCAATGATTTGTTTCA+GGG | + | chr5.2:61947470-61947489 | MS.gene72211:CDS | 25.0% |
!!! | GAAATTGAAAGATGGATTAA+AGG | + | chr5.2:61946396-61946415 | MS.gene72211:CDS | 25.0% |
AAAAACACACTGCGAAAATT+CGG | + | chr5.2:61947120-61947139 | MS.gene72211:CDS | 30.0% | |
AAAGCTGAAGATAGTGAATT+AGG | + | chr5.2:61947071-61947090 | MS.gene72211:CDS | 30.0% | |
AATGGATCAATGCAACATAA+TGG | + | chr5.2:61947209-61947228 | MS.gene72211:CDS | 30.0% | |
ACAACTCAAATTCCGAAATT+AGG | - | chr5.2:61946635-61946654 | None:intergenic | 30.0% | |
ATCTTAGGATAATCCTTCAA+TGG | - | chr5.2:61946897-61946916 | None:intergenic | 30.0% | |
ATGGATCAATGCAACATAAT+GGG | + | chr5.2:61947210-61947229 | MS.gene72211:CDS | 30.0% | |
ATTATCCTAAGATGGATGAT+AGG | + | chr5.2:61946904-61946923 | MS.gene72211:CDS | 30.0% | |
ATTGAAGGATTATCCTAAGA+TGG | + | chr5.2:61946896-61946915 | MS.gene72211:CDS | 30.0% | |
CAAATCTTCTCAAATTTCGA+TGG | + | chr5.2:61945691-61945710 | MS.gene72211:CDS | 30.0% | |
GGAATGAAGCAATTACTATA+TGG | + | chr5.2:61946685-61946704 | MS.gene72211:CDS | 30.0% | |
TTACTATATGGAAGAGATTG+GGG | + | chr5.2:61946697-61946716 | MS.gene72211:CDS | 30.0% | |
TTCATCTGATCATCCAATTT+GGG | + | chr5.2:61945840-61945859 | MS.gene72211:CDS | 30.0% | |
TTTCATCTGATCATCCAATT+TGG | + | chr5.2:61945839-61945858 | MS.gene72211:CDS | 30.0% | |
! | AGCAATTAGAGGGATTTTTA+TGG | + | chr5.2:61946722-61946741 | MS.gene72211:CDS | 30.0% |
!! | TTTTTGAAGGTGGAGAATAA+TGG | + | chr5.2:61947191-61947210 | MS.gene72211:CDS | 30.0% |
AACATTGCGTGACCTAATTT+CGG | + | chr5.2:61946620-61946639 | MS.gene72211:CDS | 35.0% | |
AAGAAAACATAGCACAAAGC+AGG | - | chr5.2:61947023-61947042 | None:intergenic | 35.0% | |
AAGATGTTCACAAAATGCAG+TGG | + | chr5.2:61946358-61946377 | MS.gene72211:CDS | 35.0% | |
ACAATTTCGTAATCCGTTAC+CGG | - | chr5.2:61946174-61946193 | None:intergenic | 35.0% | |
AGAAAACATAGCACAAAGCA+GGG | - | chr5.2:61947022-61947041 | None:intergenic | 35.0% | |
AGCTTCTTTGATACTGCATA+TGG | - | chr5.2:61947151-61947170 | None:intergenic | 35.0% | |
AGGAGAGTTTATCGAGATTA+GGG | + | chr5.2:61946316-61946335 | MS.gene72211:CDS | 35.0% | |
ATCAGTATAGTGTGTCTTTG+AGG | + | chr5.2:61946664-61946683 | MS.gene72211:CDS | 35.0% | |
ATGAAACGTAGTGAGAGATT+CGG | - | chr5.2:61945825-61945844 | None:intergenic | 35.0% | |
TACTATATGGAAGAGATTGG+GGG | + | chr5.2:61946698-61946717 | MS.gene72211:CDS | 35.0% | |
TCAAAGAAGCTCATGGAATA+AGG | + | chr5.2:61947160-61947179 | MS.gene72211:CDS | 35.0% | |
TCCTCTTCTTCAGAATCAAA+CGG | - | chr5.2:61946102-61946121 | None:intergenic | 35.0% | |
TGGATCAATGCAACATAATG+GGG | + | chr5.2:61947211-61947230 | MS.gene72211:CDS | 35.0% | |
TTTCAGAATGTTGCTGAAGT+TGG | + | chr5.2:61947398-61947417 | MS.gene72211:CDS | 35.0% | |
! | AGAATTTTAAACAACCGCTC+TGG | - | chr5.2:61946588-61946607 | None:intergenic | 35.0% |
! | AGAGCGGTTGTTTAAAATTC+TGG | + | chr5.2:61946587-61946606 | MS.gene72211:CDS | 35.0% |
! | AGCTGCAGATTTTTCTTTCA+TGG | + | chr5.2:61946494-61946513 | MS.gene72211:CDS | 35.0% |
! | AGTTGGAGAATTTGATTCGA+AGG | + | chr5.2:61946745-61946764 | MS.gene72211:CDS | 35.0% |
! | GGTGTTTGATGATTTATGCA+GGG | + | chr5.2:61947274-61947293 | MS.gene72211:CDS | 35.0% |
! | GTTGGAGAATTTGATTCGAA+GGG | + | chr5.2:61946746-61946765 | MS.gene72211:CDS | 35.0% |
! | TAGAGGGATTTTTATGGAGT+TGG | + | chr5.2:61946728-61946747 | MS.gene72211:CDS | 35.0% |
! | TGCAGATTTTTCTTTCATGG+AGG | + | chr5.2:61946497-61946516 | MS.gene72211:CDS | 35.0% |
!! | TAAGGTGTTTGGGTTTTTGA+AGG | + | chr5.2:61947178-61947197 | MS.gene72211:CDS | 35.0% |
!!! | AGTGAATTAGGAGCACTTTT+AGG | + | chr5.2:61947083-61947102 | MS.gene72211:CDS | 35.0% |
AACGAAACTCATCCTCAAGA+CGG | - | chr5.2:61946008-61946027 | None:intergenic | 40.0% | |
AGAAGAGAAATTACTCGCTG+TGG | + | chr5.2:61945609-61945628 | MS.gene72211:CDS | 40.0% | |
AGAAGCTACTAAGTCGTCAA+CGG | - | chr5.2:61945899-61945918 | None:intergenic | 40.0% | |
AGACTATGGACATCCATTGA+AGG | + | chr5.2:61946881-61946900 | MS.gene72211:CDS | 40.0% | |
CTTATGCAAACTTCATTGCG+AGG | + | chr5.2:61947375-61947394 | MS.gene72211:CDS | 40.0% | |
GAAGAGGATGAGGAAATTGA+CGG | + | chr5.2:61946114-61946133 | MS.gene72211:CDS | 40.0% | |
GAAGCTGAAATCGTTCAACA+CGG | + | chr5.2:61947253-61947272 | MS.gene72211:CDS | 40.0% | |
GAGCAAGTGTTTGAAGACTA+TGG | + | chr5.2:61946867-61946886 | MS.gene72211:CDS | 40.0% | |
GAGGAGAGTTTATCGAGATT+AGG | + | chr5.2:61946315-61946334 | MS.gene72211:CDS | 40.0% | |
GCAATGAAGTTTGCATAAGC+TGG | - | chr5.2:61947374-61947393 | None:intergenic | 40.0% | |
GCATTCATCTTCGTCTTTGT+CGG | + | chr5.2:61946929-61946948 | MS.gene72211:CDS | 40.0% | |
TATGCAGGGTTCAATCTACA+TGG | + | chr5.2:61947288-61947307 | MS.gene72211:CDS | 40.0% | |
TCTTTCATGGAGGTTTGTAG+AGG | + | chr5.2:61946507-61946526 | MS.gene72211:CDS | 40.0% | |
TGCAGTATCAAAGAAGCTCA+TGG | + | chr5.2:61947153-61947172 | MS.gene72211:CDS | 40.0% | |
TGCATCCTATCATCCATCTT+AGG | - | chr5.2:61946912-61946931 | None:intergenic | 40.0% | |
TTCATCACGTAACGCGTAAT+CGG | - | chr5.2:61946810-61946829 | None:intergenic | 40.0% | |
TTTCGATGGAAGATTCTCGA+AGG | + | chr5.2:61945705-61945724 | MS.gene72211:CDS | 40.0% | |
! | ACCGTTTGATTCTGAAGAAG+AGG | + | chr5.2:61946098-61946117 | MS.gene72211:CDS | 40.0% |
! | AGCAGGGTCCTTGTAAATTT+TGG | - | chr5.2:61947006-61947025 | None:intergenic | 40.0% |
! | AGCTCATGGAATAAGGTGTT+TGG | + | chr5.2:61947167-61947186 | MS.gene72211:CDS | 40.0% |
! | CGGTGTTTGATGATTTATGC+AGG | + | chr5.2:61947273-61947292 | MS.gene72211:CDS | 40.0% |
! | GAATTTGATTCGAAGGGATC+CGG | + | chr5.2:61946752-61946771 | MS.gene72211:CDS | 40.0% |
! | GCTCATGGAATAAGGTGTTT+GGG | + | chr5.2:61947168-61947187 | MS.gene72211:CDS | 40.0% |
! | TGATTCTGAAGAAGAGGATG+AGG | + | chr5.2:61946104-61946123 | MS.gene72211:CDS | 40.0% |
!! | GAGCACTTTTAGGAGATGAT+TGG | + | chr5.2:61947093-61947112 | MS.gene72211:CDS | 40.0% |
!! | GGTGCAAATGGATTGGATTA+TGG | + | chr5.2:61946950-61946969 | MS.gene72211:CDS | 40.0% |
!!! | TTATGCGATCGCGTGTTTTT+TGG | + | chr5.2:61946462-61946481 | MS.gene72211:CDS | 40.0% |
AAACGTAGTGAGAGATTCGG+CGG | - | chr5.2:61945822-61945841 | None:intergenic | 45.0% | |
AATTCACCGAATCGCTGTTC+CGG | - | chr5.2:61946077-61946096 | None:intergenic | 45.0% | |
ACACTCTTTCCCAAATCCAC+CGG | - | chr5.2:61946259-61946278 | None:intergenic | 45.0% | |
AGATTGGGGGAAGCAATTAG+AGG | + | chr5.2:61946711-61946730 | MS.gene72211:CDS | 45.0% | |
AGGTGAAGAGGATCTGATTC+CGG | + | chr5.2:61946140-61946159 | MS.gene72211:CDS | 45.0% | |
CGTCACATAGCAAAAACGCT+AGG | + | chr5.2:61945634-61945653 | MS.gene72211:CDS | 45.0% | |
CTTTGTCGGTGCAAATGGAT+TGG | + | chr5.2:61946943-61946962 | MS.gene72211:CDS | 45.0% | |
GATTGGGGGAAGCAATTAGA+GGG | + | chr5.2:61946712-61946731 | MS.gene72211:CDS | 45.0% | |
GGATGAGTTTCGTTCTCTCA+TGG | + | chr5.2:61946014-61946033 | MS.gene72211:CDS | 45.0% | |
GTTGTTGAATTTCGCCGATG+CGG | + | chr5.2:61946542-61946561 | MS.gene72211:CDS | 45.0% | |
TAGTAGCTTCTGTTGCAGAG+TGG | + | chr5.2:61945908-61945927 | MS.gene72211:CDS | 45.0% | |
TAGTTGCCGGAGAGAATTCT+TGG | + | chr5.2:61946293-61946312 | MS.gene72211:CDS | 45.0% | |
TCCAAAGCTGTGAAAGCTCT+TGG | - | chr5.2:61945778-61945797 | None:intergenic | 45.0% | |
TCCAAGAGCTTTCACAGCTT+TGG | + | chr5.2:61945774-61945793 | MS.gene72211:CDS | 45.0% | |
TCGCATAATCGTCTCTCACT+CGG | - | chr5.2:61946450-61946469 | None:intergenic | 45.0% | |
TCTCCTCCAAGAATTCTCTC+CGG | - | chr5.2:61946302-61946321 | None:intergenic | 45.0% | |
TGGCAACAAGAGTTTCTCGA+TGG | - | chr5.2:61947354-61947373 | None:intergenic | 45.0% | |
TGTTCACAAAATGCAGTGGC+AGG | + | chr5.2:61946362-61946381 | MS.gene72211:CDS | 45.0% | |
TTCGTCTTTGTCGGTGCAAA+TGG | + | chr5.2:61946938-61946957 | MS.gene72211:CDS | 45.0% | |
TTTCGTTCTCTCATGGAACG+CGG | + | chr5.2:61946021-61946040 | MS.gene72211:CDS | 45.0% | |
! | GATTTGTTTCAGGGAAGCAG+CGG | + | chr5.2:61947479-61947498 | MS.gene72211:CDS | 45.0% |
! | TCTTTCTGAGAAAGTCGCTG+CGG | + | chr5.2:61945732-61945751 | MS.gene72211:CDS | 45.0% |
!! | GGTGTTTGGGTTTTTGAAGG+TGG | + | chr5.2:61947181-61947200 | MS.gene72211:CDS | 45.0% |
AATTGACGGTGGAGGTGAAG+AGG | + | chr5.2:61946128-61946147 | MS.gene72211:CDS | 50.0% | |
ACACGCTATGTTCCGTCTTG+AGG | + | chr5.2:61945993-61946012 | MS.gene72211:CDS | 50.0% | |
AGATCGTTAATCGTCGCCGA+CGG | - | chr5.2:61946210-61946229 | None:intergenic | 50.0% | |
ATCGCGAAACGAATGGTTGC+CGG | + | chr5.2:61946237-61946256 | MS.gene72211:CDS | 50.0% | |
ATTACCTTCGTGCTGCGTGT+AGG | + | chr5.2:61946829-61946848 | MS.gene72211:CDS | 50.0% | |
CGCATGTGTACAGTAGTTGC+CGG | + | chr5.2:61946280-61946299 | MS.gene72211:CDS | 50.0% | |
GAGGATGAGGAAATTGACGG+TGG | + | chr5.2:61946117-61946136 | MS.gene72211:CDS | 50.0% | |
GATGAGGAAATTGACGGTGG+AGG | + | chr5.2:61946120-61946139 | MS.gene72211:CDS | 50.0% | |
GTGTAGGTCTAGGCAGACAT+TGG | + | chr5.2:61946845-61946864 | MS.gene72211:CDS | 50.0% | |
TCACGAGATCGCGAAACGAA+TGG | + | chr5.2:61946230-61946249 | MS.gene72211:CDS | 50.0% | |
TCAGCAGAGTCTGCCCAAAT+TGG | - | chr5.2:61945856-61945875 | None:intergenic | 50.0% | |
TGGATTTATCACCGGTGAGG+TGG | - | chr5.2:61945936-61945955 | None:intergenic | 50.0% | |
TGTGATCGATGCGTTACCGT+CGG | + | chr5.2:61946191-61946210 | MS.gene72211:CDS | 50.0% | |
TTAGCTTCGCTTTCGGCTAC+CGG | - | chr5.2:61947510-61947529 | None:intergenic | 50.0% | |
TTGCCGGAGAGAATTCTTGG+AGG | + | chr5.2:61946296-61946315 | MS.gene72211:CDS | 50.0% | |
! | CGATGGATTTATCACCGGTG+AGG | - | chr5.2:61945939-61945958 | None:intergenic | 50.0% |
! | CGTGGCGATGGATTTATCAC+CGG | - | chr5.2:61945944-61945963 | None:intergenic | 50.0% |
! | GAATGGTTGCCGGTGGATTT+GGG | + | chr5.2:61946247-61946266 | MS.gene72211:CDS | 50.0% |
ACCGAATCGCTGTTCCGGTA+CGG | - | chr5.2:61946072-61946091 | None:intergenic | 55.0% | |
ATCGGATGTAGTCCACCACC+CGG | - | chr5.2:61946792-61946811 | None:intergenic | 55.0% | |
GATTCGAAGGGATCCGGCTA+AGG | + | chr5.2:61946758-61946777 | MS.gene72211:CDS | 55.0% | |
TAAACAACCGCTCTGGCGAC+CGG | - | chr5.2:61946581-61946600 | None:intergenic | 55.0% | |
TAGACCTACACGCAGCACGA+AGG | - | chr5.2:61946836-61946855 | None:intergenic | 55.0% | |
TCTGATTCCGGTTGCGATGC+CGG | + | chr5.2:61946152-61946171 | MS.gene72211:CDS | 55.0% | |
TTCGTGCTGCGTGTAGGTCT+AGG | + | chr5.2:61946835-61946854 | MS.gene72211:CDS | 55.0% | |
TTGACTTAACGCCGCCGTAC+CGG | + | chr5.2:61946055-61946074 | MS.gene72211:CDS | 55.0% | |
! | AACGGCGTCGAGAAAAGCAG+CGG | - | chr5.2:61945881-61945900 | None:intergenic | 55.0% |
! | CGAATGGTTGCCGGTGGATT+TGG | + | chr5.2:61946246-61946265 | MS.gene72211:CDS | 55.0% |
AGTGAGAGATTCGGCGGTCG+AGG | - | chr5.2:61945816-61945835 | None:intergenic | 60.0% | |
ATGCGGTCGCGATTGGAAGC+CGG | + | chr5.2:61946559-61946578 | MS.gene72211:CDS | 60.0% | |
CAGGGAAGCAGCGGATCAAC+CGG | + | chr5.2:61947488-61947507 | MS.gene72211:CDS | 60.0% | |
CGTTCTCTCATGGAACGCGG+TGG | + | chr5.2:61946024-61946043 | MS.gene72211:CDS | 60.0% | |
GAATCGCTGTTCCGGTACGG+CGG | - | chr5.2:61946069-61946088 | None:intergenic | 60.0% | |
GCAGAGTGGAACCACCTCAC+CGG | + | chr5.2:61945922-61945941 | MS.gene72211:CDS | 60.0% | |
GCCGTACCGGAACAGCGATT+CGG | + | chr5.2:61946068-61946087 | MS.gene72211:CDS | 60.0% | |
GCGAAACGAATGGTTGCCGG+TGG | + | chr5.2:61946240-61946259 | MS.gene72211:CDS | 60.0% | |
GCTTCCAATCGCGACCGCAT+CGG | - | chr5.2:61946559-61946578 | None:intergenic | 60.0% | |
TCCGGTTGCGATGCCGGTAA+CGG | + | chr5.2:61946158-61946177 | MS.gene72211:CDS | 60.0% | |
TCCGTTACCGGCATCGCAAC+CGG | - | chr5.2:61946162-61946181 | None:intergenic | 60.0% | |
TCGAAGGGATCCGGCTAAGG+CGG | + | chr5.2:61946761-61946780 | MS.gene72211:CDS | 60.0% | |
TGAGAAAGTCGCTGCGGTCG+AGG | + | chr5.2:61945738-61945757 | MS.gene72211:CDS | 60.0% | |
CACGTGTCTTGCACGCGCTG+AGG | + | chr5.2:61945960-61945979 | MS.gene72211:CDS | 65.0% | |
CGAAGGGATCCGGCTAAGGC+GGG | + | chr5.2:61946762-61946781 | MS.gene72211:CDS | 65.0% | |
CTCAGCGCGTGCAAGACACG+TGG | - | chr5.2:61945962-61945981 | None:intergenic | 65.0% | |
GCGTGCAAGACACGTGGCGA+TGG | - | chr5.2:61945956-61945975 | None:intergenic | 65.0% | |
TCCGGCTAAGGCGGGTGTTC+CGG | + | chr5.2:61946770-61946789 | MS.gene72211:CDS | 65.0% | |
TTCGCCGATGCGGTCGCGAT+TGG | + | chr5.2:61946552-61946571 | MS.gene72211:CDS | 65.0% | |
TTGGAAGCCGGTCGCCAGAG+CGG | + | chr5.2:61946571-61946590 | MS.gene72211:CDS | 65.0% | |
AAGGCGGGTGTTCCGGGTGG+TGG | + | chr5.2:61946777-61946796 | MS.gene72211:CDS | 70.0% | |
CCCGGAACACCCGCCTTAGC+CGG | - | chr5.2:61946774-61946793 | None:intergenic | 70.0% | |
CCGGCTAAGGCGGGTGTTCC+GGG | + | chr5.2:61946771-61946790 | MS.gene72211:CDS | 70.0% | |
GCTAAGGCGGGTGTTCCGGG+TGG | + | chr5.2:61946774-61946793 | MS.gene72211:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 61945595 | 61947529 | 61945595 | ID=MS.gene72211 |
chr5.2 | mRNA | 61945595 | 61947529 | 61945595 | ID=MS.gene72211.t1;Parent=MS.gene72211 |
chr5.2 | exon | 61945595 | 61947529 | 61945595 | ID=MS.gene72211.t1.exon1;Parent=MS.gene72211.t1 |
chr5.2 | CDS | 61945595 | 61947529 | 61945595 | ID=cds.MS.gene72211.t1;Parent=MS.gene72211.t1 |
Gene Sequence |
Protein sequence |