Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73012.t1 | XP_013463768.1 | 96.8 | 313 | 10 | 0 | 2 | 314 | 540 | 852 | 5.80E-160 | 573.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73012.t1 | F4JT76 | 60.7 | 326 | 112 | 3 | 2 | 314 | 560 | 882 | 1.9e-95 | 350.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73012.t1 | A0A072V8X8 | 96.8 | 313 | 10 | 0 | 2 | 314 | 540 | 852 | 4.2e-160 | 573.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051676 | MS.gene73012 | 0.813387 | 2.63E-51 | -1.69E-46 |
| MS.gene051902 | MS.gene73012 | 0.840359 | 9.12E-58 | -1.69E-46 |
| MS.gene053045 | MS.gene73012 | 0.801767 | 7.71E-49 | -1.69E-46 |
| MS.gene053599 | MS.gene73012 | 0.800872 | 1.18E-48 | -1.69E-46 |
| MS.gene056764 | MS.gene73012 | 0.800477 | 1.42E-48 | -1.69E-46 |
| MS.gene057102 | MS.gene73012 | 0.801891 | 7.27E-49 | -1.69E-46 |
| MS.gene057576 | MS.gene73012 | 0.811958 | 5.39E-51 | -1.69E-46 |
| MS.gene057584 | MS.gene73012 | 0.803555 | 3.30E-49 | -1.69E-46 |
| MS.gene060365 | MS.gene73012 | 0.809506 | 1.83E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATAGTTTTTATATCTAAA+AGG | - | 8571:45850-45869 | MS.gene73012:intergenic | 10.0% |
| !! | AAACAATATATAAAACACAA+CGG | - | 8571:44631-44650 | MS.gene73012:intergenic | 15.0% |
| !! | AAAGTTGAAAATAATAACTT+GGG | - | 8571:45493-45512 | MS.gene73012:intergenic | 15.0% |
| !! | AAGAGAAAAATTTATTGTAT+TGG | - | 8571:45990-46009 | MS.gene73012:intergenic | 15.0% |
| !! | AGTTTATATTTCAAATTATG+TGG | + | 8571:44459-44478 | MS.gene73012:intron | 15.0% |
| !! | ATTTCAGATATGAATATATT+AGG | - | 8571:46239-46258 | MS.gene73012:intergenic | 15.0% |
| !!! | AAAAGTACATATTTTCATTT+TGG | + | 8571:44431-44450 | MS.gene73012:intron | 15.0% |
| !!! | AAACTGAAAAATAACAATTT+TGG | - | 8571:45408-45427 | MS.gene73012:intergenic | 15.0% |
| !!! | AACTGAAAAATAACAATTTT+GGG | - | 8571:45407-45426 | MS.gene73012:intergenic | 15.0% |
| !!! | AAGTTATTATTTTCAACTTT+GGG | + | 8571:45493-45512 | MS.gene73012:intron | 15.0% |
| !!! | ATATCTGAAATAGAAAATAA+TGG | + | 8571:46248-46267 | MS.gene73012:intron | 15.0% |
| !!! | ATATTAGGTTTTTATCAAAT+TGG | - | 8571:46224-46243 | MS.gene73012:intergenic | 15.0% |
| !! | AAAACTCTAGTTAATTGAAA+TGG | - | 8571:46844-46863 | MS.gene73012:intergenic | 20.0% |
| !! | AAACTCTAGTTAATTGAAAT+GGG | - | 8571:46843-46862 | MS.gene73012:intergenic | 20.0% |
| !! | AAATTAACCGTATTAACTAT+TGG | - | 8571:45539-45558 | MS.gene73012:intergenic | 20.0% |
| !! | ACATTCAAAAAACTTAATAC+AGG | - | 8571:47005-47024 | MS.gene73012:intergenic | 20.0% |
| !! | CAAAGTTGAAAATAATAACT+TGG | - | 8571:45494-45513 | MS.gene73012:intergenic | 20.0% |
| !!! | ACTGAAAAATAACAATTTTG+GGG | - | 8571:45406-45425 | MS.gene73012:intergenic | 20.0% |
| !!! | ATAAGTTAGAATCAATTTTC+AGG | + | 8571:46088-46107 | MS.gene73012:intron | 20.0% |
| !!! | ATTTTTTCTAAATTGTGTTC+AGG | + | 8571:46883-46902 | MS.gene73012:intron | 20.0% |
| !!! | CAAGTTATTATTTTCAACTT+TGG | + | 8571:45492-45511 | MS.gene73012:intron | 20.0% |
| !!! | CAATCTGTTAGTTTTAATTT+GGG | - | 8571:44506-44525 | MS.gene73012:intergenic | 20.0% |
| !!! | TAAGTTAGAATCAATTTTCA+GGG | + | 8571:46089-46108 | MS.gene73012:intron | 20.0% |
| !!! | TGGTTTTATTGGAAATATTT+TGG | - | 8571:46384-46403 | MS.gene73012:intergenic | 20.0% |
| !!! | TTTATGAAATTGTTGTTACA+CGG | + | 8571:47041-47060 | MS.gene73012:intron | 20.0% |
| ! | AAAAAAACAAAATGGAAGCA+TGG | - | 8571:46152-46171 | MS.gene73012:intergenic | 25.0% |
| ! | AACAACAATTTCATAAACTC+TGG | - | 8571:47038-47057 | MS.gene73012:intergenic | 25.0% |
| ! | AACAATTATTATGGAACAGA+AGG | - | 8571:45361-45380 | MS.gene73012:intergenic | 25.0% |
| ! | AATAAATATTAGAAGCTCCA+AGG | + | 8571:46181-46200 | MS.gene73012:intron | 25.0% |
| ! | AATAGAAGTTGCATACAATA+GGG | - | 8571:45110-45129 | MS.gene73012:intergenic | 25.0% |
| ! | AATTAAAACTAACAGATTGG+TGG | + | 8571:44507-44526 | MS.gene73012:intron | 25.0% |
| ! | ACATTAGTTGAAATCTGATA+GGG | - | 8571:46608-46627 | MS.gene73012:intergenic | 25.0% |
| ! | ATAACTTTGTTCTTCATTTC+TGG | + | 8571:47076-47095 | MS.gene73012:intron | 25.0% |
| ! | ATGCTGAGTTAAAAAATTCA+CGG | + | 8571:46716-46735 | MS.gene73012:intron | 25.0% |
| ! | CATTTAGGTGTCAAAAATTA+TGG | + | 8571:44692-44711 | MS.gene73012:intron | 25.0% |
| ! | CCAAATTAAAACTAACAGAT+TGG | + | 8571:44504-44523 | MS.gene73012:intron | 25.0% |
| ! | CGCAAATGTAACAATTATTA+TGG | - | 8571:45370-45389 | MS.gene73012:intergenic | 25.0% |
| ! | GAATCAACCAATAGTTAATA+CGG | + | 8571:45529-45548 | MS.gene73012:intron | 25.0% |
| ! | TATCTTCTTCAACACAATTA+GGG | - | 8571:44818-44837 | MS.gene73012:intergenic | 25.0% |
| ! | TGATTTCTGCAAAAGAATTT+AGG | + | 8571:45908-45927 | MS.gene73012:intron | 25.0% |
| ! | TTACCAAGAAAAAAGATGAT+AGG | + | 8571:46409-46428 | MS.gene73012:intron | 25.0% |
| ! | TTATCTTCTTCAACACAATT+AGG | - | 8571:44819-44838 | MS.gene73012:intergenic | 25.0% |
| !! | AAGTTAGAATCAATTTTCAG+GGG | + | 8571:46090-46109 | MS.gene73012:intron | 25.0% |
| !! | AATAGCAATTTTCTATTCTC+TGG | - | 8571:47137-47156 | MS.gene73012:intergenic | 25.0% |
| !! | ATTTGGTTTCTTAGATTCAT+CGG | - | 8571:44943-44962 | MS.gene73012:intergenic | 25.0% |
| !! | CTGAAAAATAACAATTTTGG+GGG | - | 8571:45405-45424 | MS.gene73012:intergenic | 25.0% |
| !! | CTGTTATAATAGATGAGTTT+TGG | - | 8571:46491-46510 | MS.gene73012:intergenic | 25.0% |
| !! | TGTATTGTTCTCTGAATTTT+TGG | + | 8571:45822-45841 | MS.gene73012:intron | 25.0% |
| !!! | ATAATGGATTGAAATTCATC+AGG | - | 8571:44756-44775 | MS.gene73012:intergenic | 25.0% |
| !!! | CCAATCTGTTAGTTTTAATT+TGG | - | 8571:44507-44526 | MS.gene73012:intergenic | 25.0% |
| !!! | CTTTTTTCTTGGTAATAGAA+TGG | - | 8571:46404-46423 | MS.gene73012:intergenic | 25.0% |
| !!! | TATAATAGATGAGTTTTGGA+GGG | - | 8571:46487-46506 | MS.gene73012:intergenic | 25.0% |
| !!! | TATGAAAATATTTTGGGCAA+CGG | - | 8571:46444-46463 | MS.gene73012:intergenic | 25.0% |
| !!! | TGGTAATAGAATGGTTTTAT+TGG | - | 8571:46395-46414 | MS.gene73012:intergenic | 25.0% |
| !!! | TTATAATAGATGAGTTTTGG+AGG | - | 8571:46488-46507 | MS.gene73012:intergenic | 25.0% |
| AAAGGTCCATTATTAATGTG+GGG | - | 8571:46573-46592 | MS.gene73011:intergenic | 30.0% | |
| ATACACACGATACTAATTAG+AGG | - | 8571:45466-45485 | MS.gene73012:intergenic | 30.0% | |
| ATAGAAGTTGCATACAATAG+GGG | - | 8571:45109-45128 | MS.gene73012:intergenic | 30.0% | |
| ATAGGGTCACTATTAATGAA+AGG | - | 8571:46591-46610 | MS.gene73012:intergenic | 30.0% | |
| CACATTAGTTGAAATCTGAT+AGG | - | 8571:46609-46628 | MS.gene73012:intergenic | 30.0% | |
| GAAAGGTCCATTATTAATGT+GGG | - | 8571:46574-46593 | MS.gene73012:intergenic | 30.0% | |
| GAATAGAAGTTGCATACAAT+AGG | - | 8571:45111-45130 | MS.gene73012:intergenic | 30.0% | |
| GAATCTAAGAAACCAAATAG+AGG | + | 8571:44945-44964 | MS.gene73012:CDS | 30.0% | |
| GATTTACTATGACCTCTATT+TGG | - | 8571:44960-44979 | MS.gene73012:intergenic | 30.0% | |
| TACACACGATACTAATTAGA+GGG | - | 8571:45465-45484 | MS.gene73012:intergenic | 30.0% | |
| TGAAAGGTCCATTATTAATG+TGG | - | 8571:46575-46594 | MS.gene73012:intergenic | 30.0% | |
| TTCAAACAGTTACCATGATT+TGG | + | 8571:44839-44858 | MS.gene73012:CDS | 30.0% | |
| TTCATACATGCTATTATTCC+TGG | + | 8571:46965-46984 | MS.gene73012:CDS | 30.0% | |
| ! | AATGATAATGAGTGATGAGA+TGG | - | 8571:45966-45985 | MS.gene73012:intergenic | 30.0% |
| ! | ATTCTTTTGCAGAAATCACT+TGG | - | 8571:45906-45925 | MS.gene73012:intergenic | 30.0% |
| ! | TACTAATTAGAGGGCATAAT+TGG | - | 8571:45456-45475 | MS.gene73012:intergenic | 30.0% |
| ! | TGGAAAAAGCGTATTGATAA+TGG | - | 8571:44772-44791 | MS.gene73012:intergenic | 30.0% |
| ! | TTAATTTGGGAGTTCAATCA+GGG | - | 8571:44493-44512 | MS.gene73012:intergenic | 30.0% |
| !! | AGGGGGTATGAAAATATTTT+GGG | - | 8571:46450-46469 | MS.gene73012:intergenic | 30.0% |
| !! | CATTTCTGGTGTAAGAAATT+CGG | + | 8571:47090-47109 | MS.gene73012:intron | 30.0% |
| !! | CTAGAGTTTTGTCATTCTTT+TGG | + | 8571:46854-46873 | MS.gene73012:intron | 30.0% |
| !! | TATAAGACCATTTTTCCCTA+TGG | - | 8571:46041-46060 | MS.gene73012:intergenic | 30.0% |
| !! | TTTAATTTGGGAGTTCAATC+AGG | - | 8571:44494-44513 | MS.gene73012:intergenic | 30.0% |
| !!! | ATAATAGATGAGTTTTGGAG+GGG | - | 8571:46486-46505 | MS.gene73012:intergenic | 30.0% |
| !!! | ATTGGAAATATTTTGGCTTG+AGG | - | 8571:46377-46396 | MS.gene73012:intergenic | 30.0% |
| !!! | CAACCTATCATCTTTTTTCT+TGG | - | 8571:46415-46434 | MS.gene73012:intergenic | 30.0% |
| !!! | TAGAGATGAACAGTTTTTTG+AGG | - | 8571:44654-44673 | MS.gene73012:intergenic | 30.0% |
| !!! | TATCAATACGCTTTTTCCAT+TGG | + | 8571:44773-44792 | MS.gene73012:CDS | 30.0% |
| AACAGCTACAGCATTTACTT+AGG | - | 8571:46778-46797 | MS.gene73011:intergenic | 35.0% | |
| AAGGTCCATTATTAATGTGG+GGG | - | 8571:46572-46591 | MS.gene73012:intergenic | 35.0% | |
| ACTTCAAGATTTCTACCACA+CGG | - | 8571:45744-45763 | MS.gene73012:intergenic | 35.0% | |
| ATATCCCTTGCTTTGCATTT+AGG | + | 8571:44677-44696 | MS.gene73012:intron | 35.0% | |
| ATGAGTGATGAGATGGATAA+TGG | - | 8571:45959-45978 | MS.gene73012:intergenic | 35.0% | |
| ATTGGAACAGGATGAAAGTA+AGG | - | 8571:46121-46140 | MS.gene73012:intergenic | 35.0% | |
| CTCTCTTAATATGCTTGTGT+AGG | + | 8571:45194-45213 | MS.gene73012:intron | 35.0% | |
| CTGACAATCAATAAAAGCCT+TGG | - | 8571:44574-44593 | MS.gene73012:intergenic | 35.0% | |
| GGTCAAACTAAAAGAGATAG+AGG | - | 8571:45938-45957 | MS.gene73012:intergenic | 35.0% | |
| TAACAGATTGGTGGAAGATT+GGG | + | 8571:44516-44535 | MS.gene73012:intron | 35.0% | |
| TAGAAGTTGCATACAATAGG+GGG | - | 8571:45108-45127 | MS.gene73012:intergenic | 35.0% | |
| TGTAGCTGTAATGAACTCAT+GGG | - | 8571:44409-44428 | MS.gene73012:intergenic | 35.0% | |
| TTATCACATGGTAAACTGGT+TGG | + | 8571:45052-45071 | MS.gene73012:intron | 35.0% | |
| TTCAACTCCATAGGGAAAAA+TGG | + | 8571:46031-46050 | MS.gene73012:intron | 35.0% | |
| TTCTCGGGTCAGTTTAAATT+TGG | + | 8571:44599-44618 | MS.gene73012:intron | 35.0% | |
| TTCTGTTGTACAGTTACAGA+GGG | - | 8571:46303-46322 | MS.gene73012:intergenic | 35.0% | |
| TTGATTGTCAGCATGATTCT+CGG | + | 8571:44583-44602 | MS.gene73012:CDS | 35.0% | |
| TTGGTTATCACATGGTAAAC+TGG | + | 8571:45048-45067 | MS.gene73012:CDS | 35.0% | |
| TTTCTGTTGTACAGTTACAG+AGG | - | 8571:46304-46323 | MS.gene73012:intergenic | 35.0% | |
| ! | TCTCAACCTCTTTTCTACAA+AGG | + | 8571:45023-45042 | MS.gene73012:CDS | 35.0% |
| !! | AATATTTTGGGCAACGGTTA+TGG | - | 8571:46438-46457 | MS.gene73012:intergenic | 35.0% |
| !! | CAGGGGGTATGAAAATATTT+TGG | - | 8571:46451-46470 | MS.gene73012:intergenic | 35.0% |
| !!! | GAAATATTTTGGCTTGAGGA+AGG | - | 8571:46373-46392 | MS.gene73012:intergenic | 35.0% |
| !!! | GCTGTAGCTGTTGATTTTTT+CGG | + | 8571:46786-46805 | MS.gene73012:intron | 35.0% |
| !!! | TAATAGATGAGTTTTGGAGG+GGG | - | 8571:46485-46504 | MS.gene73012:intergenic | 35.0% |
| AAATGCATTCTCACAGCTGA+GGG | - | 8571:45608-45627 | MS.gene73011:intergenic | 40.0% | |
| AACATGTCAACTTGTGCTTG+GGG | + | 8571:45777-45796 | MS.gene73012:CDS | 40.0% | |
| AGAACATGTCAACTTGTGCT+TGG | + | 8571:45775-45794 | MS.gene73012:CDS | 40.0% | |
| AGGTCCATTATTAATGTGGG+GGG | - | 8571:46571-46590 | MS.gene73012:intergenic | 40.0% | |
| ATGGATGAGAAGATTGGAAC+AGG | - | 8571:46133-46152 | MS.gene73012:intergenic | 40.0% | |
| CATTGTTAGTCGCCAAATCA+TGG | - | 8571:44854-44873 | MS.gene73012:intergenic | 40.0% | |
| CCAACACCTTTGTAGAAAAG+AGG | - | 8571:45032-45051 | MS.gene73012:intergenic | 40.0% | |
| CTAAATTGTGTTCAGGTGTC+TGG | + | 8571:46890-46909 | MS.gene73012:intron | 40.0% | |
| CTAACAGATTGGTGGAAGAT+TGG | + | 8571:44515-44534 | MS.gene73012:intron | 40.0% | |
| CTGTAGCTGTAATGAACTCA+TGG | - | 8571:44410-44429 | MS.gene73012:intergenic | 40.0% | |
| GAACATGTCAACTTGTGCTT+GGG | + | 8571:45776-45795 | MS.gene73012:CDS | 40.0% | |
| GACACCTAAATGCAAAGCAA+GGG | - | 8571:44684-44703 | MS.gene73012:intergenic | 40.0% | |
| GCTCTGCAATTTACAATCTG+AGG | + | 8571:46272-46291 | MS.gene73012:intron | 40.0% | |
| GCTTATATATTGTCCTGCAC+TGG | + | 8571:46676-46695 | MS.gene73012:intron | 40.0% | |
| GTGTTAATGAAACCCAGCTT+GGG | + | 8571:46626-46645 | MS.gene73012:intron | 40.0% | |
| TAAATGCATTCTCACAGCTG+AGG | - | 8571:45609-45628 | MS.gene73012:intergenic | 40.0% | |
| TATCTTCTGTTTGCTTCCAG+TGG | + | 8571:45640-45659 | MS.gene73012:intron | 40.0% | |
| TCCCTATGGAGTTGAATGTT+GGG | - | 8571:46027-46046 | MS.gene73012:intergenic | 40.0% | |
| TGACACCTAAATGCAAAGCA+AGG | - | 8571:44685-44704 | MS.gene73012:intergenic | 40.0% | |
| TGATGCTGCTCATGTAAGAT+GGG | + | 8571:44308-44327 | MS.gene73012:CDS | 40.0% | |
| TGATTGTCAGCATGATTCTC+GGG | + | 8571:44584-44603 | MS.gene73012:CDS | 40.0% | |
| TGGTTTCTTAGATTCATCGG+TGG | - | 8571:44940-44959 | MS.gene73012:intergenic | 40.0% | |
| TGTGTTAATGAAACCCAGCT+TGG | + | 8571:46625-46644 | MS.gene73012:intron | 40.0% | |
| TGTTAATGAAACCCAGCTTG+GGG | + | 8571:46627-46646 | MS.gene73012:intron | 40.0% | |
| TTCCCTATGGAGTTGAATGT+TGG | - | 8571:46028-46047 | MS.gene73012:intergenic | 40.0% | |
| TTCTCCCCCCACATTAATAA+TGG | + | 8571:46564-46583 | MS.gene73012:intron | 40.0% | |
| TTTAACTCAGCATTGTCCTG+CGG | - | 8571:46709-46728 | MS.gene73012:intergenic | 40.0% | |
| ! | ACAACTTCTGAAGATAGTGC+TGG | - | 8571:45718-45737 | MS.gene73012:intergenic | 40.0% |
| !! | CAAAGGTGTTGGTTATCACA+TGG | + | 8571:45040-45059 | MS.gene73012:CDS | 40.0% |
| !! | CCTCTTTTCTACAAAGGTGT+TGG | + | 8571:45029-45048 | MS.gene73012:CDS | 40.0% |
| !!! | AATAGATGAGTTTTGGAGGG+GGG | - | 8571:46484-46503 | MS.gene73012:intergenic | 40.0% |
| AACTCCTGCAGTTTCAACCT+AGG | - | 8571:44366-44385 | MS.gene73012:intergenic | 45.0% | |
| AATTATGGCAGTGCATGACC+AGG | + | 8571:44707-44726 | MS.gene73012:CDS | 45.0% | |
| AGATTGGGATACAGCATCTG+TGG | + | 8571:44531-44550 | MS.gene73012:CDS | 45.0% | |
| AGTGCATGACCAGGAAACAT+GGG | + | 8571:44716-44735 | MS.gene73012:CDS | 45.0% | |
| AGTTGAATGTTGGGCAGTGA+AGG | - | 8571:46018-46037 | MS.gene73012:intergenic | 45.0% | |
| CAATATATGCTCCCCAAGCT+GGG | - | 8571:46641-46660 | MS.gene73012:intergenic | 45.0% | |
| CATCAAAGAGCTCAGATCCT+TGG | - | 8571:46201-46220 | MS.gene73012:intergenic | 45.0% | |
| CCAGAAGACAATGCATCCAA+TGG | - | 8571:44792-44811 | MS.gene73012:intergenic | 45.0% | |
| CCATTGGATGCATTGTCTTC+TGG | + | 8571:44789-44808 | MS.gene73012:CDS | 45.0% | |
| CTTGAGCAATATCAAGCCAC+TGG | - | 8571:45659-45678 | MS.gene73012:intergenic | 45.0% | |
| GATTGGGATACAGCATCTGT+GGG | + | 8571:44532-44551 | MS.gene73012:CDS | 45.0% | |
| GCAGAAACGAAGAAGACAGT+TGG | + | 8571:46339-46358 | MS.gene73012:intron | 45.0% | |
| GCCCAACATTCAACTCCATA+GGG | + | 8571:46023-46042 | MS.gene73012:intron | 45.0% | |
| GTAAGATGGGCAAAGCTTCT+GGG | + | 8571:44321-44340 | MS.gene73012:CDS | 45.0% | |
| GTGATGCTGCTCATGTAAGA+TGG | + | 8571:44307-44326 | MS.gene73012:CDS | 45.0% | |
| GTTGAATGTTGGGCAGTGAA+GGG | - | 8571:46017-46036 | MS.gene73012:intergenic | 45.0% | |
| TAACAATGATGCTCGGTCGA+TGG | + | 8571:44866-44885 | MS.gene73012:CDS | 45.0% | |
| TAAGATGGGCAAAGCTTCTG+GGG | + | 8571:44322-44341 | MS.gene73012:CDS | 45.0% | |
| TCAATATATGCTCCCCAAGC+TGG | - | 8571:46642-46661 | MS.gene73012:intergenic | 45.0% | |
| TCACAGCTGAGGGCTAAAAT+GGG | - | 8571:45598-45617 | MS.gene73012:intergenic | 45.0% | |
| TGCCCAACATTCAACTCCAT+AGG | + | 8571:46022-46041 | MS.gene73012:intron | 45.0% | |
| TGGCGACTAACAATGATGCT+CGG | + | 8571:44859-44878 | MS.gene73012:CDS | 45.0% | |
| TGTAAGATGGGCAAAGCTTC+TGG | + | 8571:44320-44339 | MS.gene73012:CDS | 45.0% | |
| TTCAGAAGTTGTTCTCCGTG+TGG | + | 8571:45726-45745 | MS.gene73012:CDS | 45.0% | |
| ! | GGAAGCATGGATGAGAAGAT+TGG | - | 8571:46139-46158 | MS.gene73012:intergenic | 45.0% |
| ! | TGGTAAACTGGTTGGTCATC+TGG | + | 8571:45060-45079 | MS.gene73012:intron | 45.0% |
| !! | CTGAAGATAGTGCTGGCAAA+AGG | - | 8571:45711-45730 | MS.gene73012:intergenic | 45.0% |
| !!! | ATAGATGAGTTTTGGAGGGG+GGG | - | 8571:46483-46502 | MS.gene73012:intergenic | 45.0% |
| !! | TAAAAAAAAAAAAAACAAAA+TGG | - | 8571:46160-46179 | MS.gene73012:intergenic | 5.0% |
| AAACAACAGAATGGGGCACG+TGG | - | 8571:46546-46565 | MS.gene73011:intergenic | 50.0% | |
| AACAACAGAATGGGGCACGT+GGG | - | 8571:46545-46564 | MS.gene73011:intergenic | 50.0% | |
| AAGATGGGCAAAGCTTCTGG+GGG | + | 8571:44323-44342 | MS.gene73012:CDS | 50.0% | |
| ACCTAGGATGGAGAGTAGCA+CGG | - | 8571:44350-44369 | MS.gene73012:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | - | 8571:45156-45175 | MS.gene73012:intergenic | 50.0% | |
| CAGGTGTGCGAATTTGTACC+AGG | - | 8571:46986-47005 | MS.gene73012:intergenic | 50.0% | |
| CAGTGCATGACCAGGAAACA+TGG | + | 8571:44715-44734 | MS.gene73012:CDS | 50.0% | |
| CCTGCAGTTTCAACCTAGGA+TGG | - | 8571:44362-44381 | MS.gene73012:intergenic | 50.0% | |
| CTATCTCCACCCATGTTTCC+TGG | - | 8571:44728-44747 | MS.gene73012:intergenic | 50.0% | |
| CTCACAGCTGAGGGCTAAAA+TGG | - | 8571:45599-45618 | MS.gene73012:intergenic | 50.0% | |
| CTGTGGGATACTGCATTCAC+AGG | + | 8571:44548-44567 | MS.gene73012:CDS | 50.0% | |
| GATACTGCATTCACAGGCCA+AGG | + | 8571:44554-44573 | MS.gene73012:CDS | 50.0% | |
| GGGGGAGAAACAACAGAATG+GGG | - | 8571:46553-46572 | MS.gene73012:intergenic | 50.0% | |
| GGGGGGAGAAACAACAGAAT+GGG | - | 8571:46554-46573 | MS.gene73012:intergenic | 50.0% | |
| GTCCATCACCTCTAAACACC+TGG | + | 8571:46919-46938 | MS.gene73012:CDS | 50.0% | |
| TGGGGGGAGAAACAACAGAA+TGG | - | 8571:46555-46574 | MS.gene73012:intergenic | 50.0% | |
| ! | CCATCCTAGGTTGAAACTGC+AGG | + | 8571:44359-44378 | MS.gene73012:CDS | 50.0% |
| ACAACAGAATGGGGCACGTG+GGG | - | 8571:46544-46563 | MS.gene73012:intergenic | 55.0% | |
| AGGGGGGGTAACAGTATCAG+GGG | - | 8571:46468-46487 | MS.gene73012:intergenic | 55.0% | |
| CGCCAGGTGTTTAGAGGTGA+TGG | - | 8571:46924-46943 | MS.gene73012:intergenic | 55.0% | |
| CTGCACTGGAAAGAAACCGC+AGG | + | 8571:46690-46709 | MS.gene73012:intron | 55.0% | |
| CTGCGGTTTCTTTCCAGTGC+AGG | - | 8571:46692-46711 | MS.gene73012:intergenic | 55.0% | |
| GAGAGAGAGAGAGGAGAGAG+AGG | - | 8571:45149-45168 | MS.gene73012:intergenic | 55.0% | |
| GAGGGGGGGTAACAGTATCA+GGG | - | 8571:46469-46488 | MS.gene73012:intergenic | 55.0% | |
| GCATGACCAGGAAACATGGG+TGG | + | 8571:44719-44738 | MS.gene73012:CDS | 55.0% | |
| GCTTGGGGCTAAAGCAATGC+AGG | + | 8571:45792-45811 | MS.gene73012:CDS | 55.0% | |
| ! | TCCGTGCTACTCTCCATCCT+AGG | + | 8571:44346-44365 | MS.gene73012:CDS | 55.0% |
| AATGGGGCACGTGGGGTAAG+GGG | - | 8571:46537-46556 | MS.gene73012:intergenic | 60.0% | |
| AGAATGGGGCACGTGGGGTA+AGG | - | 8571:46539-46558 | MS.gene73012:intergenic | 60.0% | |
| CACCTCTAAACACCTGGCGC+TGG | + | 8571:46925-46944 | MS.gene73012:CDS | 60.0% | |
| GAATGGGGCACGTGGGGTAA+GGG | - | 8571:46538-46557 | MS.gene73012:intergenic | 60.0% | |
| GGAGGGGGGGTAACAGTATC+AGG | - | 8571:46470-46489 | MS.gene73012:intergenic | 60.0% | |
| GGGGGGGTAACAGTATCAGG+GGG | - | 8571:46467-46486 | MS.gene73012:intergenic | 60.0% | |
| TGCCAGCGCCAGGTGTTTAG+AGG | - | 8571:46930-46949 | MS.gene73012:intergenic | 60.0% | |
| !! | TGACTTGACTTGCCAGCGCC+AGG | - | 8571:46940-46959 | MS.gene73012:intergenic | 60.0% |
| GCTCGGTCGATGGCAGACAC+TGG | + | 8571:44876-44895 | MS.gene73012:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8571 | gene | 44263 | 47184 | 44263 | ID=MS.gene73012 |
| 8571 | mRNA | 44263 | 47184 | 44263 | ID=MS.gene73012.t1;Parent=MS.gene73012 |
| 8571 | exon | 44263 | 44434 | 44263 | ID=MS.gene73012.t1.exon1;Parent=MS.gene73012.t1 |
| 8571 | CDS | 44263 | 44434 | 44263 | ID=cds.MS.gene73012.t1;Parent=MS.gene73012.t1 |
| 8571 | exon | 44522 | 44605 | 44522 | ID=MS.gene73012.t1.exon2;Parent=MS.gene73012.t1 |
| 8571 | CDS | 44522 | 44605 | 44522 | ID=cds.MS.gene73012.t1;Parent=MS.gene73012.t1 |
| 8571 | exon | 44699 | 45069 | 44699 | ID=MS.gene73012.t1.exon3;Parent=MS.gene73012.t1 |
| 8571 | CDS | 44699 | 45069 | 44699 | ID=cds.MS.gene73012.t1;Parent=MS.gene73012.t1 |
| 8571 | exon | 45660 | 45813 | 45660 | ID=MS.gene73012.t1.exon4;Parent=MS.gene73012.t1 |
| 8571 | CDS | 45660 | 45813 | 45660 | ID=cds.MS.gene73012.t1;Parent=MS.gene73012.t1 |
| 8571 | exon | 46905 | 46986 | 46905 | ID=MS.gene73012.t1.exon5;Parent=MS.gene73012.t1 |
| 8571 | CDS | 46905 | 46986 | 46905 | ID=cds.MS.gene73012.t1;Parent=MS.gene73012.t1 |
| 8571 | exon | 47105 | 47184 | 47105 | ID=MS.gene73012.t1.exon6;Parent=MS.gene73012.t1 |
| 8571 | CDS | 47105 | 47184 | 47105 | ID=cds.MS.gene73012.t1;Parent=MS.gene73012.t1 |
| Gene Sequence |
| Protein sequence |
