Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73400.t1 | XP_003592620.2 | 99.8 | 429 | 1 | 0 | 1 | 429 | 1 | 429 | 1.10E-225 | 792.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73400.t1 | Q9M9C6 | 78.4 | 435 | 87 | 3 | 1 | 428 | 1 | 435 | 2.9e-171 | 602.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73400.t1 | A0A396K2P4 | 99.8 | 429 | 1 | 0 | 1 | 429 | 1 | 429 | 7.8e-226 | 792.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene053547 | MS.gene73400 | 0.811216 | 7.82E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene73400 | MS.gene007485 | PPI |
MS.gene054634 | MS.gene73400 | PPI |
MS.gene73400 | MS.gene062780 | PPI |
MS.gene044022 | MS.gene73400 | PPI |
MS.gene007487 | MS.gene73400 | PPI |
MS.gene018518 | MS.gene73400 | PPI |
MS.gene24384 | MS.gene73400 | PPI |
MS.gene012991 | MS.gene73400 | PPI |
MS.gene074613 | MS.gene73400 | PPI |
MS.gene73400 | MS.gene67109 | PPI |
MS.gene22482 | MS.gene73400 | PPI |
MS.gene061932 | MS.gene73400 | PPI |
MS.gene48493 | MS.gene73400 | PPI |
MS.gene007486 | MS.gene73400 | PPI |
MS.gene074612 | MS.gene73400 | PPI |
MS.gene73400 | MS.gene09785 | PPI |
MS.gene73400 | MS.gene38723 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73400.t1 | MTR_1g110210 | 98.154 | 325 | 6 | 0 | 1 | 325 | 1 | 325 | 0.0 | 656 |
MS.gene73400.t1 | MTR_7g112430 | 71.226 | 424 | 120 | 2 | 1 | 424 | 1 | 422 | 0.0 | 593 |
MS.gene73400.t1 | MTR_1g083750 | 69.104 | 424 | 127 | 3 | 1 | 422 | 1 | 422 | 0.0 | 575 |
MS.gene73400.t1 | MTR_1g019760 | 60.048 | 418 | 161 | 4 | 7 | 422 | 4 | 417 | 0.0 | 527 |
MS.gene73400.t1 | MTR_3g101540 | 58.962 | 424 | 166 | 5 | 6 | 425 | 3 | 422 | 0.0 | 511 |
MS.gene73400.t1 | MTR_3g101540 | 58.865 | 423 | 166 | 5 | 6 | 424 | 3 | 421 | 1.93e-180 | 510 |
MS.gene73400.t1 | MTR_1g019760 | 61.864 | 354 | 130 | 3 | 7 | 358 | 4 | 354 | 2.37e-163 | 466 |
MS.gene73400.t1 | MTR_1g083750 | 70.783 | 332 | 93 | 3 | 93 | 422 | 1 | 330 | 5.48e-159 | 452 |
MS.gene73400.t1 | MTR_7g029240 | 57.783 | 424 | 150 | 11 | 14 | 423 | 14 | 422 | 4.00e-146 | 422 |
MS.gene73400.t1 | MTR_1g014640 | 31.984 | 247 | 144 | 9 | 57 | 298 | 97 | 324 | 9.07e-27 | 110 |
MS.gene73400.t1 | MTR_1g013400 | 31.984 | 247 | 144 | 9 | 57 | 298 | 97 | 324 | 9.07e-27 | 110 |
MS.gene73400.t1 | MTR_1g115570 | 33.577 | 274 | 146 | 15 | 35 | 299 | 93 | 339 | 4.63e-26 | 108 |
MS.gene73400.t1 | MTR_3g105730 | 31.557 | 244 | 143 | 9 | 57 | 295 | 32 | 256 | 1.85e-25 | 105 |
MS.gene73400.t1 | MTR_3g105730 | 31.557 | 244 | 143 | 9 | 57 | 295 | 54 | 278 | 2.86e-25 | 105 |
MS.gene73400.t1 | MTR_4g125810 | 29.392 | 296 | 153 | 10 | 46 | 297 | 220 | 503 | 4.77e-23 | 101 |
MS.gene73400.t1 | MTR_3g464650 | 28.517 | 263 | 158 | 10 | 43 | 297 | 74 | 314 | 1.61e-22 | 97.8 |
MS.gene73400.t1 | MTR_3g091060 | 33.333 | 255 | 141 | 11 | 46 | 295 | 108 | 338 | 1.08e-21 | 96.3 |
MS.gene73400.t1 | MTR_3g464700 | 30.909 | 220 | 128 | 8 | 43 | 260 | 98 | 295 | 3.17e-21 | 94.4 |
MS.gene73400.t1 | MTR_5g071550 | 26.394 | 269 | 173 | 8 | 37 | 297 | 123 | 374 | 1.64e-20 | 93.2 |
MS.gene73400.t1 | MTR_4g123080 | 31.343 | 268 | 148 | 11 | 67 | 315 | 94 | 344 | 4.17e-20 | 91.7 |
MS.gene73400.t1 | MTR_2g008850 | 29.185 | 233 | 141 | 8 | 68 | 295 | 19 | 232 | 5.33e-20 | 89.0 |
MS.gene73400.t1 | MTR_8g463130 | 28.627 | 255 | 153 | 10 | 46 | 295 | 49 | 279 | 5.71e-20 | 89.7 |
MS.gene73400.t1 | MTR_4g123080 | 31.343 | 268 | 148 | 11 | 67 | 315 | 112 | 362 | 6.02e-20 | 91.3 |
MS.gene73400.t1 | MTR_8g463130 | 28.627 | 255 | 153 | 10 | 46 | 295 | 21 | 251 | 6.91e-20 | 89.0 |
MS.gene73400.t1 | MTR_2g078760 | 27.734 | 256 | 158 | 8 | 46 | 297 | 21 | 253 | 7.12e-20 | 89.0 |
MS.gene73400.t1 | MTR_2g078760 | 27.344 | 256 | 159 | 7 | 46 | 297 | 100 | 332 | 1.12e-19 | 90.1 |
MS.gene73400.t1 | MTR_2g008850 | 28.814 | 236 | 142 | 8 | 66 | 295 | 63 | 278 | 2.09e-19 | 88.2 |
MS.gene73400.t1 | MTR_1g086350 | 30.827 | 266 | 151 | 12 | 66 | 313 | 14 | 264 | 2.59e-19 | 88.2 |
MS.gene73400.t1 | MTR_5g009370 | 31.731 | 208 | 121 | 6 | 66 | 265 | 85 | 279 | 2.77e-19 | 89.0 |
MS.gene73400.t1 | MTR_1g086350 | 30.943 | 265 | 150 | 12 | 67 | 313 | 117 | 366 | 6.59e-19 | 88.6 |
MS.gene73400.t1 | MTR_1g086350 | 30.943 | 265 | 150 | 12 | 67 | 313 | 101 | 350 | 7.12e-19 | 88.2 |
MS.gene73400.t1 | MTR_3g074610 | 29.915 | 234 | 138 | 8 | 68 | 295 | 66 | 279 | 1.61e-18 | 85.9 |
MS.gene73400.t1 | MTR_4g094208 | 27.039 | 233 | 146 | 7 | 68 | 295 | 61 | 274 | 1.72e-18 | 85.5 |
MS.gene73400.t1 | MTR_5g063940 | 30.472 | 233 | 138 | 8 | 68 | 295 | 19 | 232 | 3.20e-18 | 84.0 |
MS.gene73400.t1 | MTR_2g040500 | 26.837 | 313 | 157 | 9 | 46 | 297 | 234 | 535 | 5.58e-18 | 86.7 |
MS.gene73400.t1 | MTR_5g063940 | 30.472 | 233 | 138 | 8 | 68 | 295 | 66 | 279 | 5.59e-18 | 84.0 |
MS.gene73400.t1 | MTR_5g071550 | 26.941 | 219 | 145 | 5 | 37 | 255 | 123 | 326 | 1.17e-17 | 84.3 |
MS.gene73400.t1 | MTR_1g015110 | 30.147 | 272 | 132 | 12 | 69 | 299 | 291 | 545 | 1.41e-17 | 85.5 |
MS.gene73400.t1 | MTR_3g104710 | 29.044 | 272 | 145 | 9 | 62 | 297 | 280 | 539 | 7.84e-17 | 83.2 |
MS.gene73400.t1 | MTR_1g050520 | 30.488 | 246 | 138 | 7 | 69 | 299 | 419 | 646 | 3.55e-16 | 81.3 |
MS.gene73400.t1 | MTR_8g102550 | 27.969 | 261 | 155 | 9 | 59 | 297 | 139 | 388 | 3.93e-16 | 80.1 |
MS.gene73400.t1 | MTR_2g078760 | 28.910 | 211 | 123 | 7 | 46 | 252 | 100 | 287 | 4.57e-16 | 78.6 |
MS.gene73400.t1 | MTR_6g081850 | 30.605 | 281 | 142 | 15 | 46 | 295 | 58 | 316 | 2.09e-15 | 77.0 |
MS.gene73400.t1 | MTR_4g094542 | 30.417 | 240 | 134 | 10 | 65 | 295 | 147 | 362 | 2.16e-15 | 77.8 |
MS.gene73400.t1 | MTR_3g068200 | 29.032 | 217 | 122 | 6 | 61 | 260 | 116 | 317 | 2.70e-15 | 77.4 |
MS.gene73400.t1 | MTR_4g116420 | 27.106 | 273 | 153 | 11 | 65 | 317 | 121 | 367 | 3.58e-14 | 73.9 |
MS.gene73400.t1 | MTR_3g491830 | 26.712 | 292 | 153 | 10 | 61 | 306 | 82 | 358 | 1.07e-13 | 72.8 |
MS.gene73400.t1 | MTR_1g028300 | 29.960 | 247 | 142 | 8 | 69 | 297 | 146 | 379 | 1.11e-13 | 72.8 |
MS.gene73400.t1 | MTR_5g080680 | 27.536 | 207 | 124 | 7 | 69 | 262 | 133 | 326 | 1.62e-13 | 72.0 |
MS.gene73400.t1 | MTR_4g007440 | 24.233 | 326 | 156 | 13 | 65 | 315 | 49 | 358 | 3.86e-13 | 70.9 |
MS.gene73400.t1 | MTR_3g107880 | 29.008 | 262 | 139 | 12 | 67 | 306 | 120 | 356 | 2.10e-12 | 68.6 |
MS.gene73400.t1 | MTR_3g107880 | 29.008 | 262 | 139 | 12 | 67 | 306 | 119 | 355 | 2.18e-12 | 68.6 |
MS.gene73400.t1 | MTR_3g107880 | 29.008 | 262 | 139 | 12 | 67 | 306 | 62 | 298 | 2.52e-12 | 67.8 |
MS.gene73400.t1 | MTR_3g105880 | 32.394 | 142 | 69 | 5 | 128 | 258 | 156 | 281 | 4.11e-12 | 67.8 |
MS.gene73400.t1 | MTR_3g105880 | 32.394 | 142 | 69 | 5 | 128 | 258 | 156 | 281 | 8.66e-12 | 66.2 |
MS.gene73400.t1 | MTR_6g087000 | 27.019 | 322 | 169 | 16 | 23 | 297 | 79 | 381 | 1.20e-11 | 67.4 |
MS.gene73400.t1 | MTR_7g112490 | 30.964 | 197 | 111 | 10 | 131 | 308 | 200 | 390 | 1.41e-11 | 66.2 |
MS.gene73400.t1 | MTR_6g087000 | 27.019 | 322 | 169 | 16 | 23 | 297 | 79 | 381 | 1.61e-11 | 67.0 |
MS.gene73400.t1 | MTR_7g112490 | 30.964 | 197 | 111 | 10 | 131 | 308 | 182 | 372 | 1.84e-11 | 65.9 |
MS.gene73400.t1 | MTR_5g005810 | 28.627 | 255 | 142 | 13 | 66 | 297 | 334 | 571 | 5.97e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene73400.t1 | AT1G68410 | 80.046 | 436 | 78 | 5 | 1 | 428 | 1 | 435 | 0.0 | 698 |
MS.gene73400.t1 | AT1G68410 | 80.046 | 436 | 78 | 5 | 1 | 428 | 1 | 435 | 0.0 | 698 |
MS.gene73400.t1 | AT1G68410 | 80.046 | 436 | 78 | 5 | 1 | 428 | 1 | 435 | 0.0 | 698 |
MS.gene73400.t1 | AT1G68410 | 80.046 | 436 | 78 | 5 | 1 | 428 | 1 | 435 | 0.0 | 698 |
MS.gene73400.t1 | AT1G09160 | 70.047 | 424 | 125 | 2 | 1 | 424 | 1 | 422 | 0.0 | 597 |
MS.gene73400.t1 | AT1G09160 | 70.047 | 424 | 125 | 2 | 1 | 424 | 1 | 422 | 0.0 | 597 |
MS.gene73400.t1 | AT1G47380 | 63.133 | 415 | 152 | 1 | 11 | 425 | 7 | 420 | 0.0 | 540 |
MS.gene73400.t1 | AT4G26080 | 30.798 | 263 | 139 | 7 | 69 | 299 | 173 | 424 | 8.11e-25 | 106 |
MS.gene73400.t1 | AT4G31750 | 31.557 | 244 | 143 | 9 | 57 | 295 | 53 | 277 | 1.25e-24 | 103 |
MS.gene73400.t1 | AT4G31750 | 31.557 | 244 | 143 | 9 | 57 | 295 | 53 | 277 | 1.40e-24 | 103 |
MS.gene73400.t1 | AT4G31750 | 31.557 | 244 | 143 | 9 | 57 | 295 | 53 | 277 | 1.40e-24 | 103 |
MS.gene73400.t1 | AT5G10740 | 30.980 | 255 | 147 | 10 | 46 | 295 | 47 | 277 | 1.58e-24 | 104 |
MS.gene73400.t1 | AT5G10740 | 30.980 | 255 | 147 | 10 | 46 | 295 | 47 | 277 | 1.58e-24 | 104 |
MS.gene73400.t1 | AT1G78200 | 32.946 | 258 | 141 | 12 | 46 | 295 | 2 | 235 | 2.74e-24 | 101 |
MS.gene73400.t1 | AT1G78200 | 32.946 | 258 | 141 | 12 | 46 | 295 | 2 | 235 | 2.74e-24 | 101 |
MS.gene73400.t1 | AT1G67820 | 32.735 | 223 | 128 | 9 | 42 | 260 | 89 | 293 | 3.72e-24 | 103 |
MS.gene73400.t1 | AT1G67820 | 32.735 | 223 | 128 | 9 | 42 | 260 | 125 | 329 | 6.61e-24 | 103 |
MS.gene73400.t1 | AT1G78200 | 32.946 | 258 | 141 | 12 | 46 | 295 | 47 | 280 | 8.74e-24 | 100 |
MS.gene73400.t1 | AT1G78200 | 32.946 | 258 | 141 | 12 | 46 | 295 | 47 | 280 | 8.74e-24 | 100 |
MS.gene73400.t1 | AT1G78200 | 32.946 | 258 | 141 | 12 | 46 | 295 | 47 | 280 | 8.74e-24 | 100 |
MS.gene73400.t1 | AT1G34750 | 31.250 | 256 | 145 | 10 | 46 | 295 | 49 | 279 | 9.95e-24 | 100 |
MS.gene73400.t1 | AT1G34750 | 31.250 | 256 | 145 | 10 | 46 | 295 | 49 | 279 | 9.95e-24 | 100 |
MS.gene73400.t1 | AT1G34750 | 31.250 | 256 | 145 | 10 | 46 | 295 | 49 | 279 | 9.95e-24 | 100 |
MS.gene73400.t1 | AT5G53140 | 30.303 | 264 | 157 | 9 | 46 | 305 | 115 | 355 | 1.54e-23 | 102 |
MS.gene73400.t1 | AT5G53140 | 30.303 | 264 | 157 | 9 | 46 | 305 | 115 | 355 | 1.54e-23 | 102 |
MS.gene73400.t1 | AT5G57050 | 29.259 | 270 | 147 | 8 | 61 | 297 | 113 | 371 | 1.59e-23 | 102 |
MS.gene73400.t1 | AT5G57050 | 29.259 | 270 | 147 | 8 | 61 | 297 | 153 | 411 | 2.36e-23 | 102 |
MS.gene73400.t1 | AT5G24940 | 30.588 | 255 | 148 | 10 | 46 | 295 | 47 | 277 | 3.39e-23 | 101 |
MS.gene73400.t1 | AT1G43900 | 30.182 | 275 | 153 | 12 | 33 | 295 | 119 | 366 | 3.57e-23 | 100 |
MS.gene73400.t1 | AT1G22280 | 30.472 | 233 | 144 | 7 | 68 | 295 | 65 | 284 | 4.36e-23 | 99.0 |
MS.gene73400.t1 | AT1G07160 | 28.364 | 275 | 163 | 10 | 37 | 297 | 122 | 376 | 4.41e-23 | 100 |
MS.gene73400.t1 | AT2G34740 | 32.016 | 253 | 147 | 10 | 50 | 298 | 104 | 335 | 1.70e-22 | 98.2 |
MS.gene73400.t1 | AT2G40180 | 28.571 | 245 | 155 | 7 | 67 | 305 | 160 | 390 | 3.12e-22 | 98.2 |
MS.gene73400.t1 | AT1G22280 | 30.472 | 233 | 138 | 7 | 68 | 295 | 65 | 278 | 6.99e-22 | 95.5 |
MS.gene73400.t1 | AT4G28400 | 27.165 | 254 | 158 | 8 | 46 | 295 | 28 | 258 | 4.32e-20 | 89.7 |
MS.gene73400.t1 | AT2G20630 | 26.667 | 255 | 158 | 10 | 46 | 295 | 46 | 276 | 4.93e-20 | 90.1 |
MS.gene73400.t1 | AT4G28400 | 27.165 | 254 | 158 | 8 | 46 | 295 | 50 | 280 | 7.02e-20 | 89.7 |
MS.gene73400.t1 | AT2G20630 | 26.378 | 254 | 158 | 10 | 46 | 294 | 46 | 275 | 2.61e-19 | 88.2 |
MS.gene73400.t1 | AT2G40860 | 30.450 | 289 | 153 | 10 | 32 | 299 | 389 | 650 | 3.25e-19 | 90.5 |
MS.gene73400.t1 | AT2G30020 | 28.216 | 241 | 146 | 9 | 67 | 297 | 169 | 392 | 3.31e-19 | 89.4 |
MS.gene73400.t1 | AT3G51470 | 30.225 | 311 | 160 | 17 | 31 | 316 | 24 | 302 | 3.96e-19 | 88.2 |
MS.gene73400.t1 | AT2G40860 | 30.450 | 289 | 153 | 10 | 32 | 299 | 291 | 552 | 4.75e-19 | 89.7 |
MS.gene73400.t1 | AT3G51470 | 30.225 | 311 | 160 | 17 | 31 | 316 | 68 | 346 | 6.53e-19 | 88.2 |
MS.gene73400.t1 | AT2G40860 | 30.894 | 246 | 125 | 8 | 32 | 258 | 389 | 608 | 8.87e-18 | 86.3 |
MS.gene73400.t1 | AT2G34740 | 30.263 | 228 | 134 | 8 | 46 | 270 | 116 | 321 | 1.18e-17 | 84.0 |
MS.gene73400.t1 | AT2G34740 | 29.911 | 224 | 134 | 7 | 50 | 270 | 100 | 303 | 1.29e-17 | 83.6 |
MS.gene73400.t1 | AT1G34750 | 29.717 | 212 | 120 | 8 | 46 | 252 | 49 | 236 | 4.34e-17 | 80.9 |
MS.gene73400.t1 | AT3G15260 | 27.559 | 254 | 157 | 8 | 46 | 295 | 56 | 286 | 4.64e-17 | 81.6 |
MS.gene73400.t1 | AT3G15260 | 27.559 | 254 | 157 | 8 | 46 | 295 | 56 | 286 | 4.64e-17 | 81.6 |
MS.gene73400.t1 | AT1G48040 | 29.193 | 322 | 181 | 14 | 32 | 327 | 75 | 375 | 5.38e-17 | 82.8 |
MS.gene73400.t1 | AT2G25620 | 29.630 | 270 | 132 | 13 | 67 | 311 | 127 | 363 | 9.59e-17 | 82.0 |
MS.gene73400.t1 | AT2G25620 | 29.630 | 270 | 132 | 13 | 67 | 311 | 127 | 363 | 9.59e-17 | 82.0 |
MS.gene73400.t1 | AT3G62260 | 29.091 | 275 | 142 | 11 | 67 | 313 | 26 | 275 | 1.76e-16 | 80.1 |
MS.gene73400.t1 | AT1G18030 | 29.528 | 254 | 135 | 9 | 69 | 295 | 110 | 346 | 3.78e-16 | 79.7 |
MS.gene73400.t1 | AT3G62260 | 29.348 | 276 | 140 | 12 | 67 | 313 | 115 | 364 | 1.02e-15 | 79.0 |
MS.gene73400.t1 | AT3G62260 | 29.348 | 276 | 140 | 12 | 67 | 313 | 116 | 365 | 1.05e-15 | 79.0 |
MS.gene73400.t1 | AT1G72770 | 26.389 | 288 | 148 | 11 | 59 | 297 | 229 | 501 | 5.69e-15 | 77.4 |
MS.gene73400.t1 | AT1G72770 | 26.389 | 288 | 148 | 11 | 59 | 297 | 229 | 501 | 5.69e-15 | 77.4 |
MS.gene73400.t1 | AT1G72770 | 26.389 | 288 | 148 | 11 | 59 | 297 | 229 | 501 | 5.69e-15 | 77.4 |
MS.gene73400.t1 | AT1G17550 | 27.599 | 279 | 137 | 11 | 69 | 297 | 238 | 501 | 5.79e-15 | 77.0 |
MS.gene73400.t1 | AT1G17550 | 27.599 | 279 | 137 | 11 | 69 | 297 | 238 | 501 | 5.79e-15 | 77.0 |
MS.gene73400.t1 | AT1G07430 | 28.507 | 221 | 125 | 7 | 62 | 265 | 151 | 355 | 8.59e-15 | 76.3 |
MS.gene73400.t1 | AT3G11410 | 27.679 | 224 | 121 | 7 | 62 | 260 | 131 | 338 | 1.02e-13 | 72.8 |
MS.gene73400.t1 | AT5G27930 | 26.804 | 291 | 169 | 12 | 42 | 294 | 66 | 350 | 3.68e-13 | 70.9 |
MS.gene73400.t1 | AT5G27930 | 26.804 | 291 | 169 | 12 | 42 | 294 | 66 | 350 | 3.68e-13 | 70.9 |
MS.gene73400.t1 | AT5G51760 | 26.984 | 252 | 142 | 8 | 41 | 265 | 87 | 323 | 7.48e-13 | 70.1 |
MS.gene73400.t1 | AT5G57050 | 31.138 | 167 | 97 | 6 | 61 | 220 | 153 | 308 | 9.39e-13 | 69.3 |
MS.gene73400.t1 | AT5G51760 | 26.984 | 252 | 142 | 8 | 41 | 265 | 117 | 353 | 1.04e-12 | 69.7 |
MS.gene73400.t1 | AT5G59220 | 29.167 | 216 | 127 | 8 | 62 | 265 | 142 | 343 | 1.53e-12 | 69.3 |
MS.gene73400.t1 | AT1G18030 | 29.952 | 207 | 106 | 8 | 69 | 253 | 110 | 299 | 3.58e-12 | 67.4 |
MS.gene73400.t1 | AT2G40860 | 30.088 | 226 | 113 | 8 | 32 | 238 | 389 | 588 | 5.40e-12 | 68.2 |
MS.gene73400.t1 | AT3G05640 | 29.388 | 245 | 138 | 13 | 71 | 287 | 96 | 333 | 2.19e-11 | 65.5 |
MS.gene73400.t1 | AT3G05640 | 29.388 | 245 | 138 | 13 | 71 | 287 | 96 | 333 | 2.19e-11 | 65.5 |
MS.gene73400.t1 | AT3G05640 | 29.388 | 245 | 138 | 13 | 71 | 287 | 96 | 333 | 2.19e-11 | 65.5 |
Find 117 sgRNAs with CRISPR-Local
Find 287 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTTAACCCTCTTGTTCTT+AGG | 0.128917 | 1.4:-84079528 | None:intergenic |
TAATTGCTTCTGATGGAATA+TGG | 0.192465 | 1.4:+84079318 | MS.gene73400:CDS |
TGTGCTCTTCCTCGAGGGCT+TGG | 0.272782 | 1.4:+84078369 | MS.gene73400:CDS |
CCTAAGAACAAGAGGGTTAA+AGG | 0.275358 | 1.4:+84079528 | MS.gene73400:CDS |
TTACCTAGGGCGTTGGTTGC+TGG | 0.278710 | 1.4:+84078414 | MS.gene73400:CDS |
CTTTAACCCTCTTGTTCTTA+GGG | 0.310359 | 1.4:-84079527 | None:intergenic |
TCTGGTTCACAGATCTTTGA+TGG | 0.328672 | 1.4:+84078288 | MS.gene73400:intron |
GTTGGTGGCAATTCGTTATC+AGG | 0.338618 | 1.4:-84079586 | None:intergenic |
ACTGATTGTCAGCGTGTTCC+CGG | 0.349411 | 1.4:+84078125 | MS.gene73400:CDS |
GTGCTCTTCCTCGAGGGCTT+GGG | 0.386635 | 1.4:+84078370 | MS.gene73400:CDS |
ACCTTCACTTGTTTGACATA+AGG | 0.398711 | 1.4:-84079158 | None:intergenic |
AGAGATGAAAAGTGAGAAGA+TGG | 0.405375 | 1.4:+84078034 | MS.gene73400:CDS |
CTATGCCTTTCAAGGTCAAT+AGG | 0.410238 | 1.4:+84079101 | MS.gene73400:CDS |
ACTTGTTTGACATAAGGTAT+TGG | 0.425889 | 1.4:-84079152 | None:intergenic |
TGCCGAACTTGCTGCTATGC+AGG | 0.428289 | 1.4:+84079388 | MS.gene73400:CDS |
GAGAAGCCTACTGTAAGAAT+TGG | 0.429166 | 1.4:+84078056 | MS.gene73400:CDS |
AACTCGGGGCAATCAACATC+TGG | 0.433595 | 1.4:+84081681 | MS.gene73400:CDS |
AAACGACGTTGAAGAGTTCC+CGG | 0.433785 | 1.4:-84078144 | None:intergenic |
GTGGAAGAATTGTTTGAAGA+AGG | 0.437789 | 1.4:+84079715 | MS.gene73400:CDS |
TAAGCTGTCGAAGAAGCTTT+CGG | 0.444989 | 1.4:+84079681 | MS.gene73400:CDS |
CAGGAGGTCTATGCCTTTCA+AGG | 0.453251 | 1.4:+84079093 | MS.gene73400:CDS |
AGACTTATAATTGCTTCTGA+TGG | 0.454700 | 1.4:+84079311 | MS.gene73400:CDS |
TGCTGCTGCTGTTTATACTA+AGG | 0.456471 | 1.4:+84078323 | MS.gene73400:CDS |
AACCTGCATAGCAGCAAGTT+CGG | 0.460496 | 1.4:-84079390 | None:intergenic |
TGGCCTCCGGTGAAGGGAGG+CGG | 0.465495 | 1.4:+84077970 | MS.gene73400:CDS |
TGCTGCTATGCAGGTTGTAA+AGG | 0.471653 | 1.4:+84079397 | MS.gene73400:CDS |
GACCTCCTGGCCAGCATCGA+AGG | 0.472439 | 1.4:-84079079 | None:intergenic |
AATTGCTTCTGATGGAATAT+GGG | 0.474848 | 1.4:+84079319 | MS.gene73400:CDS |
GGTCCCCTTCGATGCTGGCC+AGG | 0.475255 | 1.4:+84079074 | MS.gene73400:CDS |
TAGTCTATGATCAACTGTTA+AGG | 0.478725 | 1.4:-84078734 | None:intergenic |
GGATGCTGTATCATCAGAAC+TGG | 0.480880 | 1.4:+84079340 | MS.gene73400:CDS |
AGATTGGTCCCCTTCGATGC+TGG | 0.482698 | 1.4:+84079069 | MS.gene73400:intron |
GTTGGTAGGCTTAGCATTGT+CGG | 0.485201 | 1.4:+84078893 | MS.gene73400:CDS |
TTGCCATGGCTTCGAACTTG+TGG | 0.487147 | 1.4:-84081781 | None:intergenic |
TGGACGGATATGCCCTCGCT+TGG | 0.492365 | 1.4:-84081741 | None:intergenic |
CAAGCTGCTCAATCTAAGAA+AGG | 0.493673 | 1.4:+84078080 | MS.gene73400:CDS |
TCAATAGGAGACATGGATGT+TGG | 0.494506 | 1.4:+84079116 | MS.gene73400:CDS |
AAGCTGCTCAATCTAAGAAA+GGG | 0.500245 | 1.4:+84078081 | MS.gene73400:CDS |
TGGATTTGTCAAGACTGATA+AGG | 0.501738 | 1.4:+84078434 | MS.gene73400:CDS |
TGCATAGCAGCAAGTTCGGC+AGG | 0.507672 | 1.4:-84079386 | None:intergenic |
CGACAATCACAACATAGAAA+AGG | 0.508453 | 1.4:-84081807 | None:intergenic |
ATGATGCCGCCTCCCTTCAC+CGG | 0.514749 | 1.4:-84077976 | None:intergenic |
TCTCCACAAGTTCGAAGCCA+TGG | 0.517653 | 1.4:+84081778 | MS.gene73400:CDS |
TAAGATATGGCCTCCGGTGA+AGG | 0.520359 | 1.4:+84077963 | None:intergenic |
AACTATCACAAATGTGGCTG+TGG | 0.524845 | 1.4:-84078635 | None:intergenic |
GCTTTCGGCTATAAATATAG+TGG | 0.529624 | 1.4:+84079696 | MS.gene73400:CDS |
CTTGAAAGGCATAGACCTCC+TGG | 0.529945 | 1.4:-84079092 | None:intergenic |
AAAAGGTCCCGTGATACTGC+TGG | 0.531393 | 1.4:+84079658 | MS.gene73400:CDS |
AGGATGCAATGGAAGGAAAA+CGG | 0.532714 | 1.4:+84081838 | MS.gene73400:CDS |
GCAAGCTTTACCTAGGGCGT+TGG | 0.533024 | 1.4:+84078407 | MS.gene73400:CDS |
CTGATTGTCAGCGTGTTCCC+GGG | 0.534330 | 1.4:+84078126 | MS.gene73400:CDS |
ACCTCCTGGCCAGCATCGAA+GGG | 0.540520 | 1.4:-84079078 | None:intergenic |
TGTCTCCTATTGACCTTGAA+AGG | 0.545734 | 1.4:-84079106 | None:intergenic |
GAAAATTGAACCTGCGTGGA+CGG | 0.545829 | 1.4:-84081757 | None:intergenic |
TGTTGTGTGCTCTTCCTCGA+GGG | 0.548020 | 1.4:+84078364 | MS.gene73400:CDS |
CTCTTAAGCAATGCAGCAAG+AGG | 0.548373 | 1.4:-84078011 | None:intergenic |
GGTGGCAATTCGTTATCAGG+TGG | 0.548447 | 1.4:-84079583 | None:intergenic |
GCTTGACCAATTCTTACAGT+AGG | 0.550389 | 1.4:-84078062 | None:intergenic |
AGGGAACGTGTTACTGCAAG+TGG | 0.553158 | 1.4:+84078863 | MS.gene73400:CDS |
TTAGGAAATGATGAAAACTC+GGG | 0.553371 | 1.4:+84081666 | MS.gene73400:CDS |
AGTGGTTGCAAGCTTTACCT+AGG | 0.559227 | 1.4:+84078400 | MS.gene73400:CDS |
GTGGAGTAAGATATGGCCTC+CGG | 0.560962 | 1.4:+84077957 | None:intergenic |
GTGGCAATTCGTTATCAGGT+GGG | 0.563887 | 1.4:-84079582 | None:intergenic |
CAGCTTACCAGCAGTATCAC+GGG | 0.564104 | 1.4:-84079665 | None:intergenic |
CTTGATCTTGCTCCAAGCGA+GGG | 0.564745 | 1.4:+84081729 | MS.gene73400:CDS |
ACTGCAAGTGGAGGTGAAGT+TGG | 0.568657 | 1.4:+84078875 | MS.gene73400:CDS |
TTGTGATTGTCGCGATAAGA+AGG | 0.569451 | 1.4:+84081818 | MS.gene73400:CDS |
CAAGTGGAGGTGAAGTTGGT+AGG | 0.576583 | 1.4:+84078879 | MS.gene73400:CDS |
AGGTGGTCACAGCACCACCC+TGG | 0.576787 | 1.4:-84078714 | None:intergenic |
GGTGGTCACAGCACCACCCT+GGG | 0.577010 | 1.4:-84078713 | None:intergenic |
AAGATATGGCCTCCGGTGAA+GGG | 0.577203 | 1.4:+84077964 | None:intergenic |
ATTAGGAAATGATGAAAACT+CGG | 0.579096 | 1.4:+84081665 | MS.gene73400:CDS |
GAGGGCTTGGGCGAGACGAG+TGG | 0.581649 | 1.4:+84078382 | MS.gene73400:CDS |
CCACATTTGTGATAGTTGAT+CGG | 0.583822 | 1.4:+84078641 | MS.gene73400:CDS |
CCCCTTCGATGCTGGCCAGG+AGG | 0.584688 | 1.4:+84079077 | MS.gene73400:CDS |
GATAAGAAGGATGCAATGGA+AGG | 0.584937 | 1.4:+84081831 | MS.gene73400:CDS |
AATCCAGCAACCAACGCCCT+AGG | 0.587420 | 1.4:-84078417 | None:intergenic |
ACAGCTTACCAGCAGTATCA+CGG | 0.589791 | 1.4:-84079666 | None:intergenic |
AACGACGTTGAAGAGTTCCC+GGG | 0.591223 | 1.4:-84078143 | None:intergenic |
ACCTTATGTCAAACAAGTGA+AGG | 0.591802 | 1.4:+84079157 | MS.gene73400:CDS |
TTCAAGGTCAATAGGAGACA+TGG | 0.592569 | 1.4:+84079109 | MS.gene73400:CDS |
ACTTGATCTTGCTCCAAGCG+AGG | 0.593031 | 1.4:+84081728 | MS.gene73400:CDS |
TAGGAAGCCCTAAGAACAAG+AGG | 0.593966 | 1.4:+84079520 | MS.gene73400:intron |
GATCAGCAATGCTTGCTGAA+AGG | 0.596385 | 1.4:+84079737 | MS.gene73400:CDS |
GTGGTTGCAAGCTTTACCTA+GGG | 0.600761 | 1.4:+84078401 | MS.gene73400:CDS |
ATGCCGCCTCCCTTCACCGG+AGG | 0.602036 | 1.4:-84077973 | None:intergenic |
TCGTTGTATACTAGATACCC+AGG | 0.602267 | 1.4:+84078696 | MS.gene73400:CDS |
GTGTTGTGTGCTCTTCCTCG+AGG | 0.603560 | 1.4:+84078363 | MS.gene73400:CDS |
TCGCGATAAGAAGGATGCAA+TGG | 0.608406 | 1.4:+84081827 | MS.gene73400:CDS |
CAGATCTTTGATGGACACAA+TGG | 0.608852 | 1.4:+84078297 | MS.gene73400:intron |
TAGCATTGTCGGAGGTGCTG+AGG | 0.609567 | 1.4:+84078904 | MS.gene73400:CDS |
TCGTCTCGCCCAAGCCCTCG+AGG | 0.610958 | 1.4:-84078378 | None:intergenic |
ACTGTGACAGTTGCATCAGT+TGG | 0.612361 | 1.4:+84078667 | MS.gene73400:CDS |
ACAAGTTCGAAGCCATGGCA+AGG | 0.618267 | 1.4:+84081783 | MS.gene73400:CDS |
CATTTGTGATAGTTGATCGG+TGG | 0.623061 | 1.4:+84078644 | MS.gene73400:CDS |
TTTAGCTATCAAAAGCTGGT+GGG | 0.624289 | 1.4:+84079288 | MS.gene73400:intron |
AGCTGCTCAATCTAAGAAAG+GGG | 0.626609 | 1.4:+84078082 | MS.gene73400:CDS |
TCTATGATCAACTGTTAAGG+TGG | 0.627145 | 1.4:-84078731 | None:intergenic |
CTGGCAGCAAAATCTTGCCG+TGG | 0.632235 | 1.4:+84079359 | MS.gene73400:CDS |
CCGATCAACTATCACAAATG+TGG | 0.640192 | 1.4:-84078641 | None:intergenic |
TGCTCAATCTAAGAAAGGGG+AGG | 0.643437 | 1.4:+84078085 | MS.gene73400:CDS |
CAAGTTCGGCAGGCAAACCA+CGG | 0.645152 | 1.4:-84079376 | None:intergenic |
CGCTTGGAGCAAGATCAAGT+TGG | 0.652054 | 1.4:-84081725 | None:intergenic |
AGGAAGCCCTAAGAACAAGA+GGG | 0.655679 | 1.4:+84079521 | MS.gene73400:intron |
CCTCCTGGCCAGCATCGAAG+GGG | 0.656740 | 1.4:-84079077 | None:intergenic |
GATAAGGAATTTCAGAGCAG+AGG | 0.660496 | 1.4:+84078450 | MS.gene73400:CDS |
CATAGAAAAGGACCTTGCCA+TGG | 0.661304 | 1.4:-84081795 | None:intergenic |
ATATGGCCTCCGGTGAAGGG+AGG | 0.664809 | 1.4:+84077967 | None:intergenic |
GGTAGGCTTAGCATTGTCGG+AGG | 0.666572 | 1.4:+84078896 | MS.gene73400:CDS |
TATGACACTTTCACTCCACT+AGG | 0.675400 | 1.4:-84081861 | None:intergenic |
GAGGGCATATCCGTCCACGC+AGG | 0.679729 | 1.4:+84081747 | MS.gene73400:CDS |
GAACGTGTTACTGCAAGTGG+AGG | 0.682299 | 1.4:+84078866 | MS.gene73400:CDS |
CGTTGTATACTAGATACCCA+GGG | 0.684411 | 1.4:+84078697 | MS.gene73400:CDS |
ATGGAAGGAAAACGGCCTAG+TGG | 0.685068 | 1.4:+84081846 | MS.gene73400:CDS |
TAGGAAATGATGAAAACTCG+GGG | 0.696713 | 1.4:+84081667 | MS.gene73400:CDS |
TGGAGAAAATTGAACCTGCG+TGG | 0.709652 | 1.4:-84081761 | None:intergenic |
TGTATACTAGATACCCAGGG+TGG | 0.787728 | 1.4:+84078700 | MS.gene73400:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAACTAAAAATTTTAAACA+AGG | - | chr1.4:84079039-84079058 | None:intergenic | 10.0% |
!!! | TCTCTTTTATAAATTTTTAA+AGG | - | chr1.4:84081430-84081449 | None:intergenic | 10.0% |
!!! | TTAATAGTTTTAACTTTTAA+AGG | + | chr1.4:84081535-84081554 | MS.gene73400:intron | 10.0% |
!! | AAAATTTGCAATACATTTAT+AGG | + | chr1.4:84081053-84081072 | MS.gene73400:intron | 15.0% |
!! | AAATTTGCAATACATTTATA+GGG | + | chr1.4:84081054-84081073 | MS.gene73400:intron | 15.0% |
!! | ATAAGAAATTGCAAAAAATT+TGG | + | chr1.4:84081168-84081187 | MS.gene73400:intron | 15.0% |
!! | TAAGAAATTGCAAAAAATTT+GGG | + | chr1.4:84081169-84081188 | MS.gene73400:intron | 15.0% |
!!! | AATTTTGATATTTATCTCTA+AGG | + | chr1.4:84078781-84078800 | MS.gene73400:intron | 15.0% |
!!! | ATTTTTTTTCATTCAAGAAA+AGG | + | chr1.4:84079641-84079660 | MS.gene73400:CDS | 15.0% |
!!! | TATAAATTATGAAACTGTTT+TGG | + | chr1.4:84081609-84081628 | MS.gene73400:intron | 15.0% |
!! | AATTTGCAATACATTTATAG+GGG | + | chr1.4:84081055-84081074 | MS.gene73400:intron | 20.0% |
!! | ATATATACGTATATGCATAT+AGG | + | chr1.4:84080811-84080830 | MS.gene73400:intron | 20.0% |
!! | CAACATGTATATATATATAC+AGG | - | chr1.4:84080891-84080910 | None:intergenic | 20.0% |
!! | CTTTAATAATAATGTTCTGT+AGG | + | chr1.4:84079966-84079985 | MS.gene73400:intron | 20.0% |
!! | GGTTTATATAAGAAATTCAA+GGG | + | chr1.4:84081138-84081157 | MS.gene73400:intron | 20.0% |
!! | GTTTATATAAGAAATTCAAG+GGG | + | chr1.4:84081139-84081158 | MS.gene73400:intron | 20.0% |
!! | TATATAAACCCCTATAAATT+GGG | - | chr1.4:84081128-84081147 | None:intergenic | 20.0% |
!! | TCTGATTTAATATGAAGATA+AGG | - | chr1.4:84080485-84080504 | None:intergenic | 20.0% |
!! | TTAAAACTATTAATGTGACT+TGG | - | chr1.4:84081528-84081547 | None:intergenic | 20.0% |
!! | TTATATAAACCCCTATAAAT+TGG | - | chr1.4:84081129-84081148 | None:intergenic | 20.0% |
!! | TTGTAAAATAAACATGACTA+TGG | + | chr1.4:84080375-84080394 | MS.gene73400:intron | 20.0% |
!!! | ACTTTGAAGATTTTACATTT+AGG | + | chr1.4:84080091-84080110 | MS.gene73400:intron | 20.0% |
!!! | AGTTTTTAATTGATGAATAC+CGG | + | chr1.4:84079786-84079805 | MS.gene73400:intron | 20.0% |
!!! | ATTTTGAATATTTTGACTGA+TGG | + | chr1.4:84080195-84080214 | MS.gene73400:intron | 20.0% |
!!! | GCTTGTAATATTTTGTTAAA+CGG | + | chr1.4:84081356-84081375 | MS.gene73400:intron | 20.0% |
! | AAAGAAATTGCCCAATTTAT+AGG | + | chr1.4:84081115-84081134 | MS.gene73400:intron | 25.0% |
! | AAGAAATTGCCCAATTTATA+GGG | + | chr1.4:84081116-84081135 | MS.gene73400:intron | 25.0% |
! | AGAGGATATTGTTAAGTATT+TGG | - | chr1.4:84080280-84080299 | None:intergenic | 25.0% |
! | ATAGAATGCTATTCTTATTG+AGG | + | chr1.4:84078506-84078525 | MS.gene73400:intron | 25.0% |
! | ATCGAGACTTATTCAAATAT+TGG | + | chr1.4:84080120-84080139 | MS.gene73400:intron | 25.0% |
! | ATTAGGAAATGATGAAAACT+CGG | + | chr1.4:84081665-84081684 | MS.gene73400:CDS | 25.0% |
! | ATTATGTCATGTAGTTCAAA+AGG | - | chr1.4:84078221-84078240 | None:intergenic | 25.0% |
! | GACAATGTATCATTATGTTA+AGG | - | chr1.4:84080567-84080586 | None:intergenic | 25.0% |
! | GGGTTTATATAAGAAATTCA+AGG | + | chr1.4:84081137-84081156 | MS.gene73400:intron | 25.0% |
! | TAAAAAATGAAAGCAATCTC+CGG | - | chr1.4:84078259-84078278 | None:intergenic | 25.0% |
! | TATACATGTATACGTTATAC+AGG | - | chr1.4:84080736-84080755 | None:intergenic | 25.0% |
! | TTAAAGGATGCAAGATTATA+CGG | + | chr1.4:84081551-84081570 | MS.gene73400:intron | 25.0% |
!! | AATATTGGTAACTGGTTAAA+TGG | + | chr1.4:84080065-84080084 | MS.gene73400:intron | 25.0% |
!! | ATCTTCCTAATTTCCATTTT+AGG | - | chr1.4:84078964-84078983 | None:intergenic | 25.0% |
!! | TATACGGTGTCAAATTTATT+AGG | + | chr1.4:84081567-84081586 | MS.gene73400:intron | 25.0% |
!! | TGTTCTTTTAATAACAACGA+GGG | + | chr1.4:84079921-84079940 | MS.gene73400:intron | 25.0% |
!!! | AGTTTTGAATAATTGCAGAT+TGG | + | chr1.4:84079053-84079072 | MS.gene73400:intron | 25.0% |
!!! | ATACTTTTTCCATCCTAAAA+TGG | + | chr1.4:84078948-84078967 | MS.gene73400:intron | 25.0% |
!!! | CTTTATGTTGTGTTTTTGTT+GGG | - | chr1.4:84080541-84080560 | None:intergenic | 25.0% |
!!! | TTTATGTTGTGTTTTTGTTG+GGG | - | chr1.4:84080540-84080559 | None:intergenic | 25.0% |
!!! | TTTTCTAGCATCTTATCAAA+CGG | + | chr1.4:84078997-84079016 | MS.gene73400:intron | 25.0% |
AAAAAACTTACACTTTGTCG+TGG | + | chr1.4:84079263-84079282 | MS.gene73400:intron | 30.0% | |
AAATTGCAAAAAATTTGGGC+CGG | + | chr1.4:84081173-84081192 | MS.gene73400:intron | 30.0% | |
AAGTGAAATCATATCTACAC+CGG | - | chr1.4:84081481-84081500 | None:intergenic | 30.0% | |
AATCATATAGGGTAGAATCT+GGG | + | chr1.4:84080037-84080056 | MS.gene73400:intron | 30.0% | |
AATGCTATTCTTATTGAGGA+TGG | + | chr1.4:84078510-84078529 | MS.gene73400:intron | 30.0% | |
AATTGCTTCTGATGGAATAT+GGG | + | chr1.4:84079319-84079338 | MS.gene73400:CDS | 30.0% | |
ACAAATGGAGGTTAATTCAT+AGG | + | chr1.4:84079885-84079904 | MS.gene73400:intron | 30.0% | |
ACAGAAAAAGTTAACTAACG+CGG | - | chr1.4:84078807-84078826 | None:intergenic | 30.0% | |
ACTTGTTTGACATAAGGTAT+TGG | - | chr1.4:84079155-84079174 | None:intergenic | 30.0% | |
AGAAATTGCCCAATTTATAG+GGG | + | chr1.4:84081117-84081136 | MS.gene73400:intron | 30.0% | |
AGACAAAATCAGATTAGGTT+AGG | - | chr1.4:84078598-84078617 | None:intergenic | 30.0% | |
AGACTTATAATTGCTTCTGA+TGG | + | chr1.4:84079311-84079330 | MS.gene73400:CDS | 30.0% | |
AGGATTTCTGTCATTACAAA+TGG | + | chr1.4:84079870-84079889 | MS.gene73400:intron | 30.0% | |
ATAGAAGGAAAACAATATGC+AGG | - | chr1.4:84079830-84079849 | None:intergenic | 30.0% | |
ATTTCTGTCATTACAAATGG+AGG | + | chr1.4:84079873-84079892 | MS.gene73400:intron | 30.0% | |
CCAACAAAAACACAACATAA+AGG | + | chr1.4:84080539-84080558 | MS.gene73400:intron | 30.0% | |
GCTTTAGTCAAATATTAGCT+TGG | - | chr1.4:84080312-84080331 | None:intergenic | 30.0% | |
GTTTAACTCGAATTTACAAC+AGG | + | chr1.4:84080910-84080929 | MS.gene73400:intron | 30.0% | |
TAATCATATAGGGTAGAATC+TGG | + | chr1.4:84080036-84080055 | MS.gene73400:intron | 30.0% | |
TAATTGCTTCTGATGGAATA+TGG | + | chr1.4:84079318-84079337 | MS.gene73400:CDS | 30.0% | |
TACAAGCTTATAATGCTTCT+AGG | - | chr1.4:84081343-84081362 | None:intergenic | 30.0% | |
TAGAAGGAAAACAATATGCA+GGG | - | chr1.4:84079829-84079848 | None:intergenic | 30.0% | |
TAGTCTATGATCAACTGTTA+AGG | - | chr1.4:84078737-84078756 | None:intergenic | 30.0% | |
TATAATCAACGACGGAAATA+AGG | - | chr1.4:84079208-84079227 | None:intergenic | 30.0% | |
TCCATCCTAAAATGGAAATT+AGG | + | chr1.4:84078956-84078975 | MS.gene73400:intron | 30.0% | |
TCGCTTAATCTGATTTAGAA+GGG | - | chr1.4:84080172-84080191 | None:intergenic | 30.0% | |
TTAGGAAATGATGAAAACTC+GGG | + | chr1.4:84081666-84081685 | MS.gene73400:CDS | 30.0% | |
TTCGCTTAATCTGATTTAGA+AGG | - | chr1.4:84080173-84080192 | None:intergenic | 30.0% | |
! | AACCTAATCTGATTTTGTCT+AGG | + | chr1.4:84078598-84078617 | MS.gene73400:intron | 30.0% |
! | ACGTATTCCTACTGTTATTT+AGG | + | chr1.4:84079501-84079520 | MS.gene73400:intron | 30.0% |
! | ATGAGTTGAACTGTATATAC+AGG | + | chr1.4:84078840-84078859 | MS.gene73400:intron | 30.0% |
! | ATTCAAATATTGGTTGAGAG+AGG | + | chr1.4:84080130-84080149 | MS.gene73400:intron | 30.0% |
! | CTGTTCTTTTAATAACAACG+AGG | + | chr1.4:84079920-84079939 | MS.gene73400:intron | 30.0% |
! | GATTAGTTGAAACTAGAGAA+GGG | + | chr1.4:84080238-84080257 | MS.gene73400:intron | 30.0% |
! | GGAATATTCAGAAGATTTTC+CGG | - | chr1.4:84079808-84079827 | None:intergenic | 30.0% |
! | GTTCTTTTAATAACAACGAG+GGG | + | chr1.4:84079922-84079941 | MS.gene73400:intron | 30.0% |
! | TATTTCCGTCGTTGATTATA+AGG | + | chr1.4:84079208-84079227 | MS.gene73400:intron | 30.0% |
! | TGATTAGTTGAAACTAGAGA+AGG | + | chr1.4:84080237-84080256 | MS.gene73400:intron | 30.0% |
! | TGCATATTGTTTTCCTTCTA+TGG | + | chr1.4:84079829-84079848 | MS.gene73400:intron | 30.0% |
! | TTAGCTTGGAATCTTATTAG+AGG | - | chr1.4:84080298-84080317 | None:intergenic | 30.0% |
! | TTATACTATAGTGATGACGA+CGG | + | chr1.4:84080013-84080032 | MS.gene73400:intron | 30.0% |
! | TTGTTTCTCAATTCCTACTT+GGG | + | chr1.4:84081263-84081282 | MS.gene73400:intron | 30.0% |
! | TTTGTTTCTCAATTCCTACT+TGG | + | chr1.4:84081262-84081281 | MS.gene73400:intron | 30.0% |
!! | AACTTTTTCTGTATTGCTCA+TGG | + | chr1.4:84078815-84078834 | MS.gene73400:intron | 30.0% |
!! | CCTTTATGTTGTGTTTTTGT+TGG | - | chr1.4:84080542-84080561 | None:intergenic | 30.0% |
!! | TCCTAATTTCCATTTTAGGA+TGG | - | chr1.4:84078960-84078979 | None:intergenic | 30.0% |
!!! | CATTTTTTACTCACTTCTTC+TGG | + | chr1.4:84078270-84078289 | MS.gene73400:intron | 30.0% |
!!! | TATTGCAAATTTTTTTCGCC+CGG | - | chr1.4:84081046-84081065 | None:intergenic | 30.0% |
AAGCTGCTCAATCTAAGAAA+GGG | + | chr1.4:84078081-84078100 | MS.gene73400:CDS | 35.0% | |
ACATATCAATTCCTGATCCT+CGG | - | chr1.4:84078553-84078572 | None:intergenic | 35.0% | |
ACCTTATGTCAAACAAGTGA+AGG | + | chr1.4:84079157-84079176 | MS.gene73400:CDS | 35.0% | |
ACCTTCACTTGTTTGACATA+AGG | - | chr1.4:84079161-84079180 | None:intergenic | 35.0% | |
AGAGATGAAAAGTGAGAAGA+TGG | + | chr1.4:84078034-84078053 | MS.gene73400:CDS | 35.0% | |
AGGTATACGTATACGTATAC+AGG | - | chr1.4:84080716-84080735 | None:intergenic | 35.0% | |
AGTTGAACTGTATATACAGG+AGG | + | chr1.4:84078843-84078862 | MS.gene73400:intron | 35.0% | |
ATGACGACGGTAATCATATA+GGG | + | chr1.4:84080026-84080045 | MS.gene73400:intron | 35.0% | |
ATGGAGGTTAATTCATAGGT+TGG | + | chr1.4:84079889-84079908 | MS.gene73400:intron | 35.0% | |
CAAATAGATGTCAGATGAAC+TGG | - | chr1.4:84080443-84080462 | None:intergenic | 35.0% | |
CCACATTTGTGATAGTTGAT+CGG | + | chr1.4:84078641-84078660 | MS.gene73400:CDS | 35.0% | |
CGACAATCACAACATAGAAA+AGG | - | chr1.4:84081810-84081829 | None:intergenic | 35.0% | |
CGCTTAATCTGATTTAGAAG+GGG | - | chr1.4:84080171-84080190 | None:intergenic | 35.0% | |
CTCCTAGACAAAATCAGATT+AGG | - | chr1.4:84078603-84078622 | None:intergenic | 35.0% | |
CTTTAACCCTCTTGTTCTTA+GGG | - | chr1.4:84079530-84079549 | None:intergenic | 35.0% | |
GCTTTCGGCTATAAATATAG+TGG | + | chr1.4:84079696-84079715 | MS.gene73400:CDS | 35.0% | |
GTAATGACAGAAATCCTGTT+GGG | - | chr1.4:84079867-84079886 | None:intergenic | 35.0% | |
GTCAACTTCGCAATATGATT+TGG | - | chr1.4:84079469-84079488 | None:intergenic | 35.0% | |
GTGGAAGAATTGTTTGAAGA+AGG | + | chr1.4:84079715-84079734 | MS.gene73400:CDS | 35.0% | |
GTTGAACTGTATATACAGGA+GGG | + | chr1.4:84078844-84078863 | MS.gene73400:intron | 35.0% | |
TAGGAAATGATGAAAACTCG+GGG | + | chr1.4:84081667-84081686 | MS.gene73400:CDS | 35.0% | |
TCTATGATCAACTGTTAAGG+TGG | - | chr1.4:84078734-84078753 | None:intergenic | 35.0% | |
TCTTATTGAGGATGGAATCA+TGG | + | chr1.4:84078518-84078537 | MS.gene73400:intron | 35.0% | |
TGGATTTGTCAAGACTGATA+AGG | + | chr1.4:84078434-84078453 | MS.gene73400:CDS | 35.0% | |
TGTAATGACAGAAATCCTGT+TGG | - | chr1.4:84079868-84079887 | None:intergenic | 35.0% | |
TTAGGAAGATAGCTTACAAC+TGG | + | chr1.4:84078974-84078993 | MS.gene73400:intron | 35.0% | |
TTCATCATTTCCTAATCTGC+AGG | - | chr1.4:84081661-84081680 | None:intergenic | 35.0% | |
TTGACTGATGGTCAAAATGA+AGG | + | chr1.4:84080207-84080226 | MS.gene73400:intron | 35.0% | |
TTTAGCTATCAAAAGCTGGT+GGG | + | chr1.4:84079288-84079307 | MS.gene73400:intron | 35.0% | |
! | ATAGGCCTTATAATCAACGA+CGG | - | chr1.4:84079216-84079235 | None:intergenic | 35.0% |
! | TACAAGGTTTTCGTATAGAC+TGG | + | chr1.4:84080989-84081008 | MS.gene73400:intron | 35.0% |
! | TTGACAACATTGTTGTTGTC+CGG | + | chr1.4:84081459-84081478 | MS.gene73400:intron | 35.0% |
! | TTTTGTCTAGGAGAAACTTC+TGG | + | chr1.4:84078610-84078629 | MS.gene73400:intron | 35.0% |
!! | TTTTAGCTATCAAAAGCTGG+TGG | + | chr1.4:84079287-84079306 | MS.gene73400:intron | 35.0% |
!!! | ATTGCAAATTTTTTTCGCCC+GGG | - | chr1.4:84081045-84081064 | None:intergenic | 35.0% |
!!! | GGATTTTAGCTATCAAAAGC+TGG | + | chr1.4:84079284-84079303 | MS.gene73400:intron | 35.0% |
!!! | TCAGCTTATTCCGCTTTTTT+GGG | - | chr1.4:84079618-84079637 | None:intergenic | 35.0% |
!!! | TTCAGCTTATTCCGCTTTTT+TGG | - | chr1.4:84079619-84079638 | None:intergenic | 35.0% |
AAAGACCTTGTAGGATGCAT+AGG | - | chr1.4:84079234-84079253 | None:intergenic | 40.0% | |
AACTATCACAAATGTGGCTG+TGG | - | chr1.4:84078638-84078657 | None:intergenic | 40.0% | |
AATACATTGACACCAGTCCA+GGG | - | chr1.4:84081240-84081259 | None:intergenic | 40.0% | |
AATCATGGAATACAGAACCG+AGG | + | chr1.4:84078533-84078552 | MS.gene73400:intron | 40.0% | |
AGAATCTGGGCTTCGAATAT+TGG | + | chr1.4:84080050-84080069 | MS.gene73400:intron | 40.0% | |
AGCTGCTCAATCTAAGAAAG+GGG | + | chr1.4:84078082-84078101 | MS.gene73400:CDS | 40.0% | |
AGGATGCAATGGAAGGAAAA+CGG | + | chr1.4:84081838-84081857 | MS.gene73400:CDS | 40.0% | |
AGGGCTTCCTAAATAACAGT+AGG | - | chr1.4:84079511-84079530 | None:intergenic | 40.0% | |
ATCCTACAAGGTCTTTGTTC+AGG | + | chr1.4:84079238-84079257 | MS.gene73400:intron | 40.0% | |
ATCCTGAACAAAGACCTTGT+AGG | - | chr1.4:84079243-84079262 | None:intergenic | 40.0% | |
CAAGCTGCTCAATCTAAGAA+AGG | + | chr1.4:84078080-84078099 | MS.gene73400:CDS | 40.0% | |
CATTTGTGATAGTTGATCGG+TGG | + | chr1.4:84078644-84078663 | MS.gene73400:CDS | 40.0% | |
CCGATCAACTATCACAAATG+TGG | - | chr1.4:84078644-84078663 | None:intergenic | 40.0% | |
CCTAAGAACAAGAGGGTTAA+AGG | + | chr1.4:84079528-84079547 | MS.gene73400:CDS | 40.0% | |
CCTTTAACCCTCTTGTTCTT+AGG | - | chr1.4:84079531-84079550 | None:intergenic | 40.0% | |
CGTTGTATACTAGATACCCA+GGG | + | chr1.4:84078697-84078716 | MS.gene73400:CDS | 40.0% | |
CTATGCCTTTCAAGGTCAAT+AGG | + | chr1.4:84079101-84079120 | MS.gene73400:CDS | 40.0% | |
GAGAAGCCTACTGTAAGAAT+TGG | + | chr1.4:84078056-84078075 | MS.gene73400:CDS | 40.0% | |
GATAAGAAGGATGCAATGGA+AGG | + | chr1.4:84081831-84081850 | MS.gene73400:CDS | 40.0% | |
GATAAGGAATTTCAGAGCAG+AGG | + | chr1.4:84078450-84078469 | MS.gene73400:CDS | 40.0% | |
GATGACGACGGTAATCATAT+AGG | + | chr1.4:84080025-84080044 | MS.gene73400:intron | 40.0% | |
GCTTGACCAATTCTTACAGT+AGG | - | chr1.4:84078065-84078084 | None:intergenic | 40.0% | |
GCTTGCATAAAATCCCAAGT+AGG | - | chr1.4:84081279-84081298 | None:intergenic | 40.0% | |
TAAGCTGTCGAAGAAGCTTT+CGG | + | chr1.4:84079681-84079700 | MS.gene73400:CDS | 40.0% | |
TAATAGCTTAGCTAGCTGTC+CGG | + | chr1.4:84078237-84078256 | MS.gene73400:intron | 40.0% | |
TATGACACTTTCACTCCACT+AGG | - | chr1.4:84081864-84081883 | None:intergenic | 40.0% | |
TCAACGACGGAAATAAGGAA+AGG | - | chr1.4:84079203-84079222 | None:intergenic | 40.0% | |
TCAATAGGAGACATGGATGT+TGG | + | chr1.4:84079116-84079135 | MS.gene73400:CDS | 40.0% | |
TCGTTGTATACTAGATACCC+AGG | + | chr1.4:84078696-84078715 | MS.gene73400:CDS | 40.0% | |
TGTCTCCTATTGACCTTGAA+AGG | - | chr1.4:84079109-84079128 | None:intergenic | 40.0% | |
TTCAAGGTCAATAGGAGACA+TGG | + | chr1.4:84079109-84079128 | MS.gene73400:CDS | 40.0% | |
TTGTGATTGTCGCGATAAGA+AGG | + | chr1.4:84081818-84081837 | MS.gene73400:CDS | 40.0% | |
! | CAGATCTTTGATGGACACAA+TGG | + | chr1.4:84078297-84078316 | MS.gene73400:intron | 40.0% |
! | CCAGGATTTTTATAAAGCCC+GGG | + | chr1.4:84081025-84081044 | MS.gene73400:intron | 40.0% |
! | GCCAGGATTTTTATAAAGCC+CGG | + | chr1.4:84081024-84081043 | MS.gene73400:intron | 40.0% |
! | TCTGGTTCACAGATCTTTGA+TGG | + | chr1.4:84078288-84078307 | MS.gene73400:intron | 40.0% |
! | TGCTGCTGCTGTTTATACTA+AGG | + | chr1.4:84078323-84078342 | MS.gene73400:CDS | 40.0% |
! | TGTTGATTGAGACATACTCG+AGG | + | chr1.4:84081385-84081404 | MS.gene73400:intron | 40.0% |
!! | AACGTCGTTTTCTGTATTCG+CGG | + | chr1.4:84078157-84078176 | MS.gene73400:CDS | 40.0% |
!! | GACAAAAGCATCACCATAGA+AGG | - | chr1.4:84079845-84079864 | None:intergenic | 40.0% |
!! | TATGCTATGCTTGCTGTAGT+TGG | + | chr1.4:84079433-84079452 | MS.gene73400:intron | 40.0% |
!!! | AGCTTATTCCGCTTTTTTGG+GGG | - | chr1.4:84079616-84079635 | None:intergenic | 40.0% |
!!! | CAGCTTATTCCGCTTTTTTG+GGG | - | chr1.4:84079617-84079636 | None:intergenic | 40.0% |
AAACGACGTTGAAGAGTTCC+CGG | - | chr1.4:84078147-84078166 | None:intergenic | 45.0% | |
AACCTGCATAGCAGCAAGTT+CGG | - | chr1.4:84079393-84079412 | None:intergenic | 45.0% | |
ACAGCTTACCAGCAGTATCA+CGG | - | chr1.4:84079669-84079688 | None:intergenic | 45.0% | |
ACCAATTGTGCCTGCAGATT+AGG | + | chr1.4:84081648-84081667 | MS.gene73400:intron | 45.0% | |
ACTGTGACAGTTGCATCAGT+TGG | + | chr1.4:84078667-84078686 | MS.gene73400:CDS | 45.0% | |
AGGAAGCCCTAAGAACAAGA+GGG | + | chr1.4:84079521-84079540 | MS.gene73400:intron | 45.0% | |
AGTGGTTGCAAGCTTTACCT+AGG | + | chr1.4:84078400-84078419 | MS.gene73400:CDS | 45.0% | |
ATACATTGACACCAGTCCAG+GGG | - | chr1.4:84081239-84081258 | None:intergenic | 45.0% | |
ATGACTATGGCATTGTGCAC+TGG | + | chr1.4:84080388-84080407 | MS.gene73400:intron | 45.0% | |
CAATACATTGACACCAGTCC+AGG | - | chr1.4:84081241-84081260 | None:intergenic | 45.0% | |
CAGATGAACTGGAGTTACAG+CGG | - | chr1.4:84080432-84080451 | None:intergenic | 45.0% | |
CATAGAAAAGGACCTTGCCA+TGG | - | chr1.4:84081798-84081817 | None:intergenic | 45.0% | |
CTACAGCAAGCATAGCATAG+TGG | - | chr1.4:84079432-84079451 | None:intergenic | 45.0% | |
CTCTTAAGCAATGCAGCAAG+AGG | - | chr1.4:84078014-84078033 | None:intergenic | 45.0% | |
GAAAATTGAACCTGCGTGGA+CGG | - | chr1.4:84081760-84081779 | None:intergenic | 45.0% | |
GGATGCTGTATCATCAGAAC+TGG | + | chr1.4:84079340-84079359 | MS.gene73400:CDS | 45.0% | |
GTGGCAATTCGTTATCAGGT+GGG | - | chr1.4:84079585-84079604 | None:intergenic | 45.0% | |
GTGGTTGCAAGCTTTACCTA+GGG | + | chr1.4:84078401-84078420 | MS.gene73400:CDS | 45.0% | |
TAAGGCCTATGCATCCTACA+AGG | + | chr1.4:84079226-84079245 | MS.gene73400:intron | 45.0% | |
TAGGAAGCCCTAAGAACAAG+AGG | + | chr1.4:84079520-84079539 | MS.gene73400:intron | 45.0% | |
TCCTAATCTGCAGGCACAAT+TGG | - | chr1.4:84081652-84081671 | None:intergenic | 45.0% | |
TCGCGATAAGAAGGATGCAA+TGG | + | chr1.4:84081827-84081846 | MS.gene73400:CDS | 45.0% | |
TGCTCAATCTAAGAAAGGGG+AGG | + | chr1.4:84078085-84078104 | MS.gene73400:CDS | 45.0% | |
TGCTGCTATGCAGGTTGTAA+AGG | + | chr1.4:84079397-84079416 | MS.gene73400:CDS | 45.0% | |
TGGAGAAAATTGAACCTGCG+TGG | - | chr1.4:84081764-84081783 | None:intergenic | 45.0% | |
TGTATACTAGATACCCAGGG+TGG | + | chr1.4:84078700-84078719 | MS.gene73400:CDS | 45.0% | |
TTTCGTATAGACTGGTGCAG+TGG | + | chr1.4:84080997-84081016 | MS.gene73400:intron | 45.0% | |
! | AATTTCAGAGCAGAGGTGTG+TGG | + | chr1.4:84078457-84078476 | MS.gene73400:intron | 45.0% |
! | CCCGGGCTTTATAAAAATCC+TGG | - | chr1.4:84081028-84081047 | None:intergenic | 45.0% |
! | GATCAGCAATGCTTGCTGAA+AGG | + | chr1.4:84079737-84079756 | MS.gene73400:CDS | 45.0% |
! | GGGCTTCGAATATTGGTAAC+TGG | + | chr1.4:84080057-84080076 | MS.gene73400:intron | 45.0% |
! | GTTGGTAGGCTTAGCATTGT+CGG | + | chr1.4:84078893-84078912 | MS.gene73400:CDS | 45.0% |
!! | GTTGGTGGCAATTCGTTATC+AGG | - | chr1.4:84079589-84079608 | None:intergenic | 45.0% |
!!! | TTATTCCGCTTTTTTGGGGG+AGG | - | chr1.4:84079613-84079632 | None:intergenic | 45.0% |
!! | TATATATATATATATATACA+AGG | + | chr1.4:84080645-84080664 | MS.gene73400:intron | 5.0% |
AAAAAATTTGGGCCGGAGCC+CGG | + | chr1.4:84081180-84081199 | MS.gene73400:intron | 50.0% | |
AAAAGGTCCCGTGATACTGC+TGG | + | chr1.4:84079658-84079677 | MS.gene73400:CDS | 50.0% | |
AACGACGTTGAAGAGTTCCC+GGG | - | chr1.4:84078146-84078165 | None:intergenic | 50.0% | |
AACTCGGGGCAATCAACATC+TGG | + | chr1.4:84081681-84081700 | MS.gene73400:CDS | 50.0% | |
ACAAGTTCGAAGCCATGGCA+AGG | + | chr1.4:84081783-84081802 | MS.gene73400:CDS | 50.0% | |
ACTGATTGTCAGCGTGTTCC+CGG | + | chr1.4:84078125-84078144 | MS.gene73400:CDS | 50.0% | |
ACTGCAAGTGGAGGTGAAGT+TGG | + | chr1.4:84078875-84078894 | MS.gene73400:CDS | 50.0% | |
ACTTGATCTTGCTCCAAGCG+AGG | + | chr1.4:84081728-84081747 | MS.gene73400:CDS | 50.0% | |
ATGGAAGGAAAACGGCCTAG+TGG | + | chr1.4:84081846-84081865 | MS.gene73400:CDS | 50.0% | |
CAACACCTCCCCCAAAAAAG+CGG | + | chr1.4:84079605-84079624 | MS.gene73400:CDS | 50.0% | |
CAGCTTACCAGCAGTATCAC+GGG | - | chr1.4:84079668-84079687 | None:intergenic | 50.0% | |
CAGGAGGTCTATGCCTTTCA+AGG | + | chr1.4:84079093-84079112 | MS.gene73400:CDS | 50.0% | |
CGCTTGGAGCAAGATCAAGT+TGG | - | chr1.4:84081728-84081747 | None:intergenic | 50.0% | |
CTTGATCTTGCTCCAAGCGA+GGG | + | chr1.4:84081729-84081748 | MS.gene73400:CDS | 50.0% | |
GGAATACAGAACCGAGGATC+AGG | + | chr1.4:84078539-84078558 | MS.gene73400:intron | 50.0% | |
GGTGGCAATTCGTTATCAGG+TGG | - | chr1.4:84079586-84079605 | None:intergenic | 50.0% | |
TCTCCACAAGTTCGAAGCCA+TGG | + | chr1.4:84081778-84081797 | MS.gene73400:CDS | 50.0% | |
TGGGGTACAGACTGCTGAAA+TGG | - | chr1.4:84080522-84080541 | None:intergenic | 50.0% | |
TGTTGTGTGCTCTTCCTCGA+GGG | + | chr1.4:84078364-84078383 | MS.gene73400:CDS | 50.0% | |
TTGCCATGGCTTCGAACTTG+TGG | - | chr1.4:84081784-84081803 | None:intergenic | 50.0% | |
! | AGGGAACGTGTTACTGCAAG+TGG | + | chr1.4:84078863-84078882 | MS.gene73400:CDS | 50.0% |
! | CAAGTGGAGGTGAAGTTGGT+AGG | + | chr1.4:84078879-84078898 | MS.gene73400:CDS | 50.0% |
! | CTTGAAAGGCATAGACCTCC+TGG | - | chr1.4:84079095-84079114 | None:intergenic | 50.0% |
! | GAACGTGTTACTGCAAGTGG+AGG | + | chr1.4:84078866-84078885 | MS.gene73400:CDS | 50.0% |
! | GGTGATGCTTTTGTCCCAAC+AGG | + | chr1.4:84079850-84079869 | MS.gene73400:intron | 50.0% |
!!! | TTTTTTGGGGGAGGTGTTGG+TGG | - | chr1.4:84079604-84079623 | None:intergenic | 50.0% |
AAAAATTTGGGCCGGAGCCC+GGG | + | chr1.4:84081181-84081200 | MS.gene73400:intron | 55.0% | |
AACAACGAGGGGCTGAAGCT+AGG | + | chr1.4:84079933-84079952 | MS.gene73400:intron | 55.0% | |
AATCCAGCAACCAACGCCCT+AGG | - | chr1.4:84078420-84078439 | None:intergenic | 55.0% | |
ACAACGAGGGGCTGAAGCTA+GGG | + | chr1.4:84079934-84079953 | MS.gene73400:intron | 55.0% | |
CAAGTTCGGCAGGCAAACCA+CGG | - | chr1.4:84079379-84079398 | None:intergenic | 55.0% | |
CGTATAGACTGGTGCAGTGG+CGG | + | chr1.4:84081000-84081019 | MS.gene73400:intron | 55.0% | |
CTGATTGTCAGCGTGTTCCC+GGG | + | chr1.4:84078126-84078145 | MS.gene73400:CDS | 55.0% | |
CTGGCAGCAAAATCTTGCCG+TGG | + | chr1.4:84079359-84079378 | MS.gene73400:CDS | 55.0% | |
GCAAGCTTTACCTAGGGCGT+TGG | + | chr1.4:84078407-84078426 | MS.gene73400:CDS | 55.0% | |
GGTAGGCTTAGCATTGTCGG+AGG | + | chr1.4:84078896-84078915 | MS.gene73400:CDS | 55.0% | |
GTGTTGTGTGCTCTTCCTCG+AGG | + | chr1.4:84078363-84078382 | MS.gene73400:CDS | 55.0% | |
TGCATAGCAGCAAGTTCGGC+AGG | - | chr1.4:84079389-84079408 | None:intergenic | 55.0% | |
! | AGATTGGTCCCCTTCGATGC+TGG | + | chr1.4:84079069-84079088 | MS.gene73400:intron | 55.0% |
! | GAGCAGAGGTGTGTGGACTT+TGG | + | chr1.4:84078464-84078483 | MS.gene73400:intron | 55.0% |
!! | TAGCATTGTCGGAGGTGCTG+AGG | + | chr1.4:84078904-84078923 | MS.gene73400:CDS | 55.0% |
!! | TGCCGAACTTGCTGCTATGC+AGG | + | chr1.4:84079388-84079407 | MS.gene73400:CDS | 55.0% |
!! | TTACCTAGGGCGTTGGTTGC+TGG | + | chr1.4:84078414-84078433 | MS.gene73400:CDS | 55.0% |
!!! | CGCTTTTTTGGGGGAGGTGT+TGG | - | chr1.4:84079607-84079626 | None:intergenic | 55.0% |
ATGATGCCGCCTCCCTTCAC+CGG | - | chr1.4:84077979-84077998 | None:intergenic | 60.0% | |
CAACGAGGGGCTGAAGCTAG+GGG | + | chr1.4:84079935-84079954 | MS.gene73400:intron | 60.0% | |
CATTGACACCAGTCCAGGGG+CGG | - | chr1.4:84081236-84081255 | None:intergenic | 60.0% | |
GTGCTCTTCCTCGAGGGCTT+GGG | + | chr1.4:84078370-84078389 | MS.gene73400:CDS | 60.0% | |
TGGACGGATATGCCCTCGCT+TGG | - | chr1.4:84081744-84081763 | None:intergenic | 60.0% | |
TGTGCTCTTCCTCGAGGGCT+TGG | + | chr1.4:84078369-84078388 | MS.gene73400:CDS | 60.0% | |
! | ACCTCCTGGCCAGCATCGAA+GGG | - | chr1.4:84079081-84079100 | None:intergenic | 60.0% |
AGGTGGTCACAGCACCACCC+TGG | - | chr1.4:84078717-84078736 | None:intergenic | 65.0% | |
CCAGTCCAGGGGCGGTTCTA+AGG | - | chr1.4:84081228-84081247 | None:intergenic | 65.0% | |
CCTTAGAACCGCCCCTGGAC+TGG | + | chr1.4:84081225-84081244 | MS.gene73400:intron | 65.0% | |
GGTGGTCACAGCACCACCCT+GGG | - | chr1.4:84078716-84078735 | None:intergenic | 65.0% | |
! | CCTCCTGGCCAGCATCGAAG+GGG | - | chr1.4:84079080-84079099 | None:intergenic | 65.0% |
! | GACCTCCTGGCCAGCATCGA+AGG | - | chr1.4:84079082-84079101 | None:intergenic | 65.0% |
! | GAGGGCATATCCGTCCACGC+AGG | + | chr1.4:84081747-84081766 | MS.gene73400:CDS | 65.0% |
ATGCCGCCTCCCTTCACCGG+AGG | - | chr1.4:84077976-84077995 | None:intergenic | 70.0% | |
CCCCTTCGATGCTGGCCAGG+AGG | + | chr1.4:84079077-84079096 | MS.gene73400:CDS | 70.0% | |
CGAGGGGCTGAAGCTAGGGG+AGG | + | chr1.4:84079938-84079957 | MS.gene73400:intron | 70.0% | |
GAGGGCTTGGGCGAGACGAG+TGG | + | chr1.4:84078382-84078401 | MS.gene73400:CDS | 70.0% | |
GGTCCCCTTCGATGCTGGCC+AGG | + | chr1.4:84079074-84079093 | MS.gene73400:CDS | 70.0% | |
TCGTCTCGCCCAAGCCCTCG+AGG | - | chr1.4:84078381-84078400 | None:intergenic | 70.0% | |
TGGCCTCCGGTGAAGGGAGG+CGG | + | chr1.4:84077970-84077989 | MS.gene73400:CDS | 70.0% | |
! | ACTGGTGCAGTGGCGGAGCC+AGG | + | chr1.4:84081007-84081026 | MS.gene73400:intron | 70.0% |
!! | CCAGGGGCGGTTCTAAGGCC+CGG | - | chr1.4:84081223-84081242 | None:intergenic | 70.0% |
!! | GTTCTAAGGCCCGGCGAGCC+CGG | - | chr1.4:84081214-84081233 | None:intergenic | 70.0% |
!! | TTCTAAGGCCCGGCGAGCCC+GGG | - | chr1.4:84081213-84081232 | None:intergenic | 70.0% |
CCGGGCCTTAGAACCGCCCC+TGG | + | chr1.4:84081220-84081239 | MS.gene73400:intron | 75.0% | |
! | CCGGAGCCCGGGCGAGTGCC+CGG | + | chr1.4:84081192-84081211 | MS.gene73400:intron | 85.0% |
! | CCGGGCACTCGCCCGGGCTC+CGG | - | chr1.4:84081195-84081214 | None:intergenic | 85.0% |
! | CGGAGCCCGGGCGAGTGCCC+GGG | + | chr1.4:84081193-84081212 | MS.gene73400:intron | 85.0% |
! | GCGAGCCCGGGCACTCGCCC+GGG | - | chr1.4:84081201-84081220 | None:intergenic | 85.0% |
! | GGCGAGCCCGGGCACTCGCC+CGG | - | chr1.4:84081202-84081221 | None:intergenic | 85.0% |
! | GGCGAGTGCCCGGGCTCGCC+GGG | + | chr1.4:84081202-84081221 | MS.gene73400:intron | 85.0% |
! | GGGCGAGTGCCCGGGCTCGC+CGG | + | chr1.4:84081201-84081220 | MS.gene73400:intron | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 84077969 | 84081884 | 84077969 | ID=MS.gene73400 |
chr1.4 | mRNA | 84077969 | 84081884 | 84077969 | ID=MS.gene73400.t1;Parent=MS.gene73400 |
chr1.4 | exon | 84077969 | 84078178 | 84077969 | ID=MS.gene73400.t1.exon1;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84077969 | 84078178 | 84077969 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84078300 | 84078471 | 84078300 | ID=MS.gene73400.t1.exon2;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84078300 | 84078471 | 84078300 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84078620 | 84078773 | 84078620 | ID=MS.gene73400.t1.exon3;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84078620 | 84078773 | 84078620 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84078862 | 84078925 | 84078862 | ID=MS.gene73400.t1.exon4;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84078862 | 84078925 | 84078862 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84079071 | 84079178 | 84079071 | ID=MS.gene73400.t1.exon5;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84079071 | 84079178 | 84079071 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84079293 | 84079418 | 84079293 | ID=MS.gene73400.t1.exon6;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84079293 | 84079418 | 84079293 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84079523 | 84079758 | 84079523 | ID=MS.gene73400.t1.exon7;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84079523 | 84079758 | 84079523 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
chr1.4 | exon | 84081665 | 84081884 | 84081665 | ID=MS.gene73400.t1.exon8;Parent=MS.gene73400.t1 |
chr1.4 | CDS | 84081665 | 84081884 | 84081665 | ID=cds.MS.gene73400.t1;Parent=MS.gene73400.t1 |
Gene Sequence |
Protein sequence |