AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene007486

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007486.t1 MTR_7g100430 90.722 582 11 3 11 549 1 582 0.0 1050
MS.gene007486.t1 MTR_1g115575 67.518 548 128 6 51 549 47 593 0.0 716
MS.gene007486.t1 MTR_4g062100 42.540 496 234 9 66 518 19 506 2.94e-110 340
MS.gene007486.t1 MTR_2g096190 42.800 500 235 10 60 515 10 502 3.84e-109 337
MS.gene007486.t1 MTR_7g117620 38.772 521 279 6 65 549 30 546 5.43e-99 310
MS.gene007486.t1 MTR_1g032100 39.792 480 248 8 110 549 53 531 1.42e-98 309
MS.gene007486.t1 MTR_7g100390 38.241 523 274 8 71 549 3 520 1.01e-92 293
MS.gene007486.t1 MTR_8g105260 36.570 484 258 9 110 549 60 538 4.76e-89 284
MS.gene007486.t1 MTR_2g101310 25.697 502 295 15 108 542 133 623 3.18e-28 119
MS.gene007486.t1 MTR_2g101310 25.600 250 139 6 79 283 2 249 7.68e-15 77.8
MS.gene007486.t1 MTR_3g105650 24.835 455 295 16 82 528 5 420 9.13e-20 92.4
MS.gene007486.t1 MTR_8g073260 26.126 333 210 10 79 404 8 311 9.73e-20 92.4
MS.gene007486.t1 MTR_1g069110 26.650 394 201 13 152 479 18 389 1.89e-19 91.7
MS.gene007486.t1 MTR_8g467780 25.146 342 208 11 81 404 10 321 2.87e-16 81.6
MS.gene007486.t1 MTR_5g043640 34.091 176 103 4 114 278 20 193 6.43e-15 75.1
MS.gene007486.t1 MTR_8g040930 25.076 331 197 10 136 439 12 318 1.15e-14 76.3
MS.gene007486.t1 MTR_8g041240 25.076 331 197 10 136 439 12 318 1.15e-14 76.3
MS.gene007486.t1 MTR_8g069880 24.507 355 208 12 114 439 40 363 1.86e-14 76.3
MS.gene007486.t1 MTR_2g101310 25.600 250 139 6 79 283 2 249 2.00e-14 76.3
MS.gene007486.t1 MTR_2g101310 27.536 207 136 2 147 339 135 341 3.28e-14 75.5
MS.gene007486.t1 MTR_3g058550 30.539 167 98 3 108 256 2 168 4.16e-14 72.0
MS.gene007486.t1 MTR_2g101320 26.122 245 139 7 79 286 2 241 5.36e-14 75.1
MS.gene007486.t1 MTR_2g101320 26.087 207 139 2 147 339 135 341 3.85e-13 72.4
MS.gene007486.t1 MTR_2g101320 24.270 445 269 12 82 481 142 563 8.22e-13 71.6
MS.gene007486.t1 MTR_8g068990 24.377 361 206 12 114 447 45 365 1.28e-13 73.6
MS.gene007486.t1 MTR_6g027840 25.733 307 190 7 1 295 84 364 2.56e-13 72.8
MS.gene007486.t1 MTR_8g080080 26.923 312 174 9 73 336 97 402 3.23e-13 72.8
MS.gene007486.t1 MTR_1g059930 26.102 295 187 10 114 404 45 312 2.50e-12 69.3
MS.gene007486.t1 MTR_8g039620 23.333 330 228 9 78 404 10 317 3.63e-12 68.9
MS.gene007486.t1 MTR_7g021090 23.367 398 245 14 78 448 5 369 4.28e-12 68.6
MS.gene007486.t1 MTR_3g055310 26.009 223 143 7 289 498 227 440 5.55e-12 68.6
MS.gene007486.t1 MTR_3g051060 29.518 166 100 3 108 256 54 219 6.19e-12 68.9
MS.gene007486.t1 MTR_8g066670 23.858 394 246 12 76 441 1066 1433 7.29e-12 68.9
MS.gene007486.t1 MTR_3g055310 26.009 223 143 7 289 498 253 466 8.14e-12 68.2
MS.gene007486.t1 MTR_3g055310 26.009 223 143 7 289 498 255 468 8.17e-12 68.2
MS.gene007486.t1 MTR_3g055310 28.125 128 85 2 378 498 261 388 8.51e-12 67.8
MS.gene007486.t1 MTR_3g055310 26.009 223 143 7 289 498 280 493 9.83e-12 67.8
MS.gene007486.t1 MTR_3g055310 28.125 128 85 2 378 498 198 325 1.37e-11 66.6
MS.gene007486.t1 MTR_8g072510 23.894 339 220 13 77 407 5 313 2.29e-11 66.6
MS.gene007486.t1 MTR_8g062410 25.954 262 171 8 77 336 5 245 4.06e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene007486.t1 AT3G09550 67.687 588 130 7 21 549 28 614 0.0 737
MS.gene007486.t1 AT3G09550 67.687 588 130 7 21 549 21 607 0.0 736
MS.gene007486.t1 AT3G09550 67.687 588 130 7 21 549 21 607 0.0 736
MS.gene007486.t1 AT3G12360 66.606 545 136 6 50 549 35 578 0.0 699
MS.gene007486.t1 AT3G12360 66.606 545 136 6 50 549 47 590 0.0 698
MS.gene007486.t1 AT2G31820 40.119 506 259 7 75 540 148 649 9.25e-106 332
MS.gene007486.t1 AT5G60070 42.146 522 238 13 63 529 17 529 1.18e-101 317
MS.gene007486.t1 AT1G05640 40.116 516 252 10 75 543 110 615 1.85e-99 314
MS.gene007486.t1 AT1G07710 40.561 535 261 10 66 549 15 543 4.19e-99 311
MS.gene007486.t1 AT1G07710 40.561 535 261 10 66 549 15 543 4.19e-99 311
MS.gene007486.t1 AT2G01680 37.778 450 241 7 110 522 56 503 3.40e-92 292
MS.gene007486.t1 AT5G02620 37.271 491 267 6 66 515 5 495 6.05e-85 273
MS.gene007486.t1 AT5G02620 37.271 491 267 6 66 515 5 495 6.05e-85 273
MS.gene007486.t1 AT5G02620 37.271 491 267 6 66 515 5 495 6.05e-85 273
MS.gene007486.t1 AT5G02620 35.603 514 267 7 66 515 5 518 1.24e-79 260
MS.gene007486.t1 AT5G02620 35.603 514 267 7 66 515 5 518 1.24e-79 260
MS.gene007486.t1 AT1G34050 25.053 471 305 12 73 513 83 535 4.10e-29 122
MS.gene007486.t1 AT1G10340 24.756 513 296 15 78 511 37 538 2.33e-28 119
MS.gene007486.t1 AT1G10340 24.951 509 296 15 78 511 37 534 2.69e-28 119
MS.gene007486.t1 AT2G24600 25.188 532 295 20 78 519 37 555 4.68e-28 119
MS.gene007486.t1 AT2G24600 25.188 532 295 20 78 519 37 555 4.68e-28 119
MS.gene007486.t1 AT5G54710 24.699 498 320 15 73 532 97 577 8.26e-27 115
MS.gene007486.t1 AT5G54710 24.699 498 320 15 73 532 142 622 8.99e-27 115
MS.gene007486.t1 AT1G03670 24.858 527 359 11 16 521 83 593 4.93e-26 112
MS.gene007486.t1 AT4G03500 24.082 490 278 15 79 500 137 600 6.80e-24 106
MS.gene007486.t1 AT4G03500 24.082 490 278 15 79 500 114 577 9.02e-24 105
MS.gene007486.t1 AT4G03500 24.082 490 278 15 79 500 114 577 9.02e-24 105
MS.gene007486.t1 AT4G03490 25.000 432 272 12 82 504 182 570 9.33e-21 96.7
MS.gene007486.t1 AT4G03490 25.000 432 272 12 82 504 172 560 1.02e-20 96.3
MS.gene007486.t1 AT5G50140 21.774 496 335 12 80 528 29 518 1.05e-20 95.9
MS.gene007486.t1 AT4G03490 25.000 432 272 12 82 504 182 570 1.05e-20 96.7
MS.gene007486.t1 AT4G03470 25.510 490 316 16 52 499 138 620 4.17e-19 91.7
MS.gene007486.t1 AT1G14500 26.975 367 235 12 79 434 2 346 4.12e-18 87.4
MS.gene007486.t1 AT5G54700 25.753 365 198 11 185 502 4 342 6.66e-18 87.0
MS.gene007486.t1 AT4G10720 24.286 420 267 16 115 519 39 422 7.54e-18 86.7
MS.gene007486.t1 AT5G54700 24.650 357 207 9 168 517 17 318 8.47e-18 85.5
MS.gene007486.t1 AT4G03440 24.795 488 308 16 48 512 231 682 2.08e-17 86.3
MS.gene007486.t1 AT4G03440 24.795 488 308 16 48 512 231 682 2.08e-17 86.3
MS.gene007486.t1 AT4G03440 24.795 488 308 16 48 512 238 689 2.80e-17 85.9
MS.gene007486.t1 AT4G03490 24.888 446 275 16 70 504 116 512 3.40e-17 85.5
MS.gene007486.t1 AT4G10720 25.758 330 218 10 115 436 39 349 4.62e-17 84.0
MS.gene007486.t1 AT4G03490 24.888 446 275 16 70 504 126 522 7.02e-17 84.3
MS.gene007486.t1 AT4G14390 24.421 475 295 14 80 495 168 637 7.65e-17 84.3
MS.gene007486.t1 AT4G03460 22.081 471 288 9 64 492 113 546 9.74e-17 84.0
MS.gene007486.t1 AT4G03460 22.081 471 288 9 64 492 145 578 1.31e-16 83.6
MS.gene007486.t1 AT2G03430 34.104 173 101 4 117 278 16 186 3.03e-16 79.0
MS.gene007486.t1 AT2G03430 31.858 226 135 7 79 291 13 232 3.07e-15 75.9
MS.gene007486.t1 AT4G14390 24.473 474 295 14 80 495 149 617 4.95e-16 82.0
MS.gene007486.t1 AT4G14390 24.473 474 295 14 80 495 168 636 6.95e-16 81.3
MS.gene007486.t1 AT4G03480 23.611 360 235 8 110 441 312 659 1.34e-15 80.5
MS.gene007486.t1 AT4G03480 23.611 360 235 8 110 441 309 656 1.37e-15 80.5
MS.gene007486.t1 AT5G15500 24.590 305 195 9 115 409 40 319 1.86e-14 76.3
MS.gene007486.t1 AT4G03450 24.685 397 252 11 79 447 154 531 9.54e-14 74.3
MS.gene007486.t1 AT4G03450 24.685 397 252 11 79 447 154 531 1.74e-13 73.6
MS.gene007486.t1 AT5G51160 26.471 272 168 7 145 404 44 295 4.44e-13 72.0
MS.gene007486.t1 AT3G18670 29.167 144 91 2 364 501 428 566 1.04e-12 71.2
MS.gene007486.t1 AT3G18670 29.167 144 91 2 364 501 483 621 1.14e-12 71.2
MS.gene007486.t1 AT1G14480 22.066 426 285 13 115 527 39 430 3.52e-12 68.9
MS.gene007486.t1 AT5G07270 28.755 233 120 9 110 317 3 214 4.67e-11 65.9

Find 148 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATATCAGAAGAGATTT+TGG 0.120998 7.3:-12339457 MS.gene007486:CDS
GATATTGTCAATATATTGTT+AGG 0.214361 7.3:-12339952 MS.gene007486:CDS
GACTATTAAATAGCATAAAT+TGG 0.217594 7.3:+12338740 None:intergenic
AGTCCTTCTTTGGTGGTATA+AGG 0.227846 7.3:+12340561 None:intergenic
TCTAGGGGTGGTTGGGGTGT+TGG 0.234547 7.3:+12340952 None:intergenic
GCAATCCTTGTTACTGTTGT+AGG 0.249078 7.3:-12338908 MS.gene007486:CDS
TCCCTCGTCATTTCCAATTC+TGG 0.254175 7.3:-12340872 MS.gene007486:CDS
TCCAAAATCTCTTCTGATAT+TGG 0.257559 7.3:+12339456 None:intergenic
GGGTGGGTCTAGGGGTGGTT+GGG 0.257724 7.3:+12340945 None:intergenic
CCTTGGCTGGTTGAGATCAT+TGG 0.276643 7.3:+12339395 None:intergenic
TACCTCTACCCTCTTCTTCC+TGG 0.277013 7.3:+12339766 None:intergenic
TTTACAAGATAGTCCTTCTT+TGG 0.279483 7.3:+12340551 None:intergenic
ATTGTAATGGGTGGTGTTCT+TGG 0.280140 7.3:-12338881 MS.gene007486:CDS
CTAGGGGTGGTTGGGGTGTT+GGG 0.284653 7.3:+12340953 None:intergenic
GACGAGGCGTTTGCCAGAAT+TGG 0.304324 7.3:+12340859 None:intergenic
GGTGGGTCTAGGGGTGGTTG+GGG 0.319326 7.3:+12340946 None:intergenic
CCTCACTCTTCGGTGACGTT+TGG 0.320261 7.3:+12338832 None:intergenic
CCTGGTGGGGATCATGATAA+TGG 0.324667 7.3:-12339169 MS.gene007486:CDS
TGCCGGAAGTGGAGAGGAAT+AGG 0.343790 7.3:+12340924 None:intergenic
GAGAGGAATAGGGTGGGTCT+AGG 0.344264 7.3:+12340935 None:intergenic
GGTGGTTGGGGTGTTGGGTT+CGG 0.348554 7.3:+12340958 None:intergenic
AGGGTGGGTCTAGGGGTGGT+TGG 0.353657 7.3:+12340944 None:intergenic
ATGCTGAAGTTGCGGATATA+AGG 0.362620 7.3:-12340677 MS.gene007486:CDS
GGAGACAAGAAGGGCTTTGC+CGG 0.364614 7.3:+12340907 None:intergenic
GACGAGGGATTTGTTGGAGT+TGG 0.371967 7.3:+12340886 None:intergenic
CTTCCCACGACGGCCATTCA+TGG 0.373412 7.3:-12341008 MS.gene007486:CDS
CAATCCTTGTTACTGTTGTA+GGG 0.374512 7.3:-12338907 MS.gene007486:CDS
CACTTCATTGGCTGTGGTGG+TGG 0.381287 7.3:-12339080 MS.gene007486:CDS
TCCTCAGCTCGTCCCTTGGC+TGG 0.388294 7.3:+12339382 None:intergenic
GAAAGAGGAGCGTGGCCGGC+GGG 0.390146 7.3:+12340980 None:intergenic
GAGGAATAGGGTGGGTCTAG+GGG 0.395584 7.3:+12340937 None:intergenic
AAGGACTCACTTATTCGTTA+TGG 0.399648 7.3:-12339429 MS.gene007486:CDS
GTCCTTCTTTGGTGGTATAA+GGG 0.400914 7.3:+12340562 None:intergenic
AGAGGAATAGGGTGGGTCTA+GGG 0.406165 7.3:+12340936 None:intergenic
GTTCAAATAACTGTTGTTAG+AGG 0.406250 7.3:-12339058 MS.gene007486:CDS
TCTCTTTCTTCCTCACTCTT+CGG 0.407155 7.3:+12338822 None:intergenic
ATCTTATGATCCTAGTCAAT+TGG 0.414022 7.3:-12340034 MS.gene007486:CDS
AAGTTGCTTCTTGCTGCTGA+TGG 0.419284 7.3:-12339842 MS.gene007486:CDS
TGAATGGCCGTCGTGGGAAG+GGG 0.421910 7.3:+12341011 None:intergenic
GTCATGCTTCCTGACAAGTT+TGG 0.426669 7.3:-12339812 MS.gene007486:CDS
ATGAATGGCCGTCGTGGGAA+GGG 0.430958 7.3:+12341010 None:intergenic
GGAAATGACGAGGGATTTGT+TGG 0.436881 7.3:+12340880 None:intergenic
AAGAAGGGCTTTGCCGGAAG+TGG 0.440749 7.3:+12340913 None:intergenic
ATGAAGTGCATTCTTTCCAT+TGG 0.445344 7.3:+12339999 None:intergenic
GGAGATAAAGTCTGAGAGAA+GGG 0.447714 7.3:-12339035 MS.gene007486:CDS
TTCGGAAAGAGGAGCGTGGC+CGG 0.449506 7.3:+12340976 None:intergenic
TTCATGGCGTAATTCTGATT+CGG 0.456908 7.3:-12338777 MS.gene007486:CDS
CAAGGAATGGAACACATTCA+TGG 0.458877 7.3:-12338793 MS.gene007486:CDS
GAATAGGGTGGGTCTAGGGG+TGG 0.461324 7.3:+12340940 None:intergenic
AGGGCATTCGCATTGGTGTC+GGG 0.461867 7.3:+12339522 None:intergenic
GCAGTATTGCCAAACTTGTC+AGG 0.463768 7.3:+12339803 None:intergenic
ACTTCATTTATCTGCACGCC+AGG 0.464249 7.3:-12339983 MS.gene007486:CDS
CATGAATGGCCGTCGTGGGA+AGG 0.466907 7.3:+12341009 None:intergenic
GCAGCATCTTATATAGTAGT+TGG 0.467155 7.3:-12338950 MS.gene007486:CDS
CTGGTGGGGATCATGATAAT+GGG 0.468589 7.3:-12339168 MS.gene007486:CDS
GCAAATGTCTTGATTAGCTC+TGG 0.471908 7.3:+12340126 None:intergenic
ATCTTTCTTAATCTGAGTCA+TGG 0.474155 7.3:+12339356 None:intergenic
AGGACAAACGCCGCTTCATA+TGG 0.478041 7.3:-12339893 MS.gene007486:CDS
ACCCTATTCCTCTCCACTTC+CGG 0.480160 7.3:-12340926 MS.gene007486:CDS
GAGGGCATTCGCATTGGTGT+CGG 0.481466 7.3:+12339521 None:intergenic
ACAAGATAGTCCTTCTTTGG+TGG 0.484767 7.3:+12340554 None:intergenic
GGGGTGTTGGGTTCGGAAAG+AGG 0.490833 7.3:+12340965 None:intergenic
GGGAGATAAAGTCTGAGAGA+AGG 0.495604 7.3:-12339036 MS.gene007486:CDS
CCGGCGGGGTGATCCATGAA+TGG 0.498012 7.3:+12340995 None:intergenic
TCTTGTGAGGGCATTCGCAT+TGG 0.498367 7.3:+12339515 None:intergenic
GCCGGAAGTGGAGAGGAATA+GGG 0.499698 7.3:+12340925 None:intergenic
TTCAAATAACTGTTGTTAGA+GGG 0.504770 7.3:-12339057 MS.gene007486:CDS
AATAGCATTAGAGATGAAAA+AGG 0.505791 7.3:+12339111 None:intergenic
TTTCACTTCATTGGCTGTGG+TGG 0.508039 7.3:-12339083 MS.gene007486:CDS
GGCAGCATCACCGCGTTGCG+CGG 0.508234 7.3:+12340766 None:intergenic
GAATGGCCGTCGTGGGAAGG+GGG 0.508462 7.3:+12341012 None:intergenic
TCTTGATTAGCTCTGGATCA+TGG 0.513054 7.3:+12340133 None:intergenic
CTCCCTTATACCACCAAAGA+AGG 0.513242 7.3:-12340564 MS.gene007486:CDS
TAGTTGGTCGACGCAGCCTG+TGG 0.515142 7.3:-12338934 MS.gene007486:CDS
ATCCTTGTTACTGTTGTAGG+GGG 0.516823 7.3:-12338905 MS.gene007486:CDS
TGTTGGAGTTGGAGACAAGA+AGG 0.518725 7.3:+12340897 None:intergenic
GGAAAGAGGAGCGTGGCCGG+CGG 0.518995 7.3:+12340979 None:intergenic
TGCGGCTACAAGAGGGCATA+CGG 0.525316 7.3:-12340076 MS.gene007486:CDS
CTAGCTATCTCCAATTGACT+AGG 0.532153 7.3:+12340024 None:intergenic
AAAGAGGAGCGTGGCCGGCG+GGG 0.535243 7.3:+12340981 None:intergenic
GGAAGAAAGAGAAGATCTCA+AGG 0.537556 7.3:-12338811 MS.gene007486:CDS
TTGCATATTGCAGCAAATCA+AGG 0.538026 7.3:-12340507 MS.gene007486:CDS
CTCGGTGTCATTATGACGAC+CGG 0.538570 7.3:+12340799 None:intergenic
GGTTTCTGTGCTATTTGCAA+CGG 0.540421 7.3:-12339218 MS.gene007486:CDS
ATATTGTCAATATATTGTTA+GGG 0.541111 7.3:-12339951 MS.gene007486:CDS
AAAGAGAAGATCTCAAGGAA+TGG 0.541144 7.3:-12338806 MS.gene007486:CDS
CAGTCCTTCGAGCAAGCTGC+GGG 0.546468 7.3:+12339923 None:intergenic
CCAATGATCTCAACCAGCCA+AGG 0.546813 7.3:-12339395 MS.gene007486:CDS
TGTCAATATATTGTTAGGGA+AGG 0.552145 7.3:-12339947 MS.gene007486:CDS
CTTGTATCTGCGGCTACAAG+AGG 0.552318 7.3:-12340084 MS.gene007486:CDS
CCATTATCATGATCCCCACC+AGG 0.552472 7.3:+12339169 None:intergenic
GTCATTAACTTCATTAACAA+TGG 0.552902 7.3:+12340650 None:intergenic
TGTTAATGAAGTTAATGACT+TGG 0.556946 7.3:-12340646 MS.gene007486:CDS
TTGGAGATAGCTAGATCCAA+TGG 0.558617 7.3:-12340015 MS.gene007486:CDS
TCAGTCCTTCGAGCAAGCTG+CGG 0.564899 7.3:+12339922 None:intergenic
CTCTACCCTCTTCTTCCTGG+TGG 0.567336 7.3:+12339769 None:intergenic
TTGCGCGGCAAGATGAAGCT+CGG 0.569249 7.3:+12340781 None:intergenic
TGCTACCAACTCTGTAACTG+TGG 0.569261 7.3:-12339239 MS.gene007486:CDS
GTTAATGAAGTTAATGACTT+GGG 0.570722 7.3:-12340645 MS.gene007486:CDS
GTTGGAGTTGGAGACAAGAA+GGG 0.573938 7.3:+12340898 None:intergenic
CTGCATTGCATGTAGCCACC+AGG 0.574200 7.3:-12339784 MS.gene007486:CDS
ACCAGCCAAGGGACGAGCTG+AGG 0.575224 7.3:-12339383 MS.gene007486:CDS
CACCAGGAAGAAGAGGGTAG+AGG 0.576801 7.3:-12339768 MS.gene007486:intron
TGCAACTCCTCTTGTATCTG+CGG 0.578451 7.3:-12340094 MS.gene007486:CDS
AATCCTTGTTACTGTTGTAG+GGG 0.579425 7.3:-12338906 MS.gene007486:CDS
TCAAATAACTGTTGTTAGAG+GGG 0.580153 7.3:-12339056 MS.gene007486:CDS
AGGACCCGCAGCTTGCTCGA+AGG 0.582573 7.3:-12339927 MS.gene007486:CDS
CCATTCATGGATCACCCCGC+CGG 0.583675 7.3:-12340995 MS.gene007486:CDS
TGATCCATGAATGGCCGTCG+TGG 0.585158 7.3:+12341004 None:intergenic
TGATTTGCTGCAATATGCAA+TGG 0.587424 7.3:+12340510 None:intergenic
TGTAGCCACCAGGAAGAAGA+GGG 0.588374 7.3:-12339774 MS.gene007486:CDS
TCCTTGTTACTGTTGTAGGG+GGG 0.588655 7.3:-12338904 MS.gene007486:CDS
TGACAATATCAACATATCCC+TGG 0.589135 7.3:+12339965 None:intergenic
GATCCATGAATGGCCGTCGT+GGG 0.591024 7.3:+12341005 None:intergenic
TAACAAGGATTGCAGCCCAC+AGG 0.594685 7.3:+12338918 None:intergenic
AGTTGGTCGACGCAGCCTGT+GGG 0.602868 7.3:-12338933 MS.gene007486:CDS
GCTCGAAGGACTGATAAGAA+AGG 0.603769 7.3:-12339913 MS.gene007486:CDS
CTTCATCTTGCCGCGCAACG+CGG 0.604158 7.3:-12340776 MS.gene007486:CDS
ATGTAGCCACCAGGAAGAAG+AGG 0.605868 7.3:-12339775 MS.gene007486:CDS
AGTGCTTCCGCAAGGTCAAG+AGG 0.607646 7.3:+12339480 None:intergenic
TGATAATGGGATGGCTGTGA+TGG 0.612051 7.3:-12339155 MS.gene007486:CDS
TGCCAGAATTGGAAATGACG+AGG 0.612477 7.3:+12340870 None:intergenic
GTCTGAGAGAAGGGTTACAG+AGG 0.613101 7.3:-12339026 MS.gene007486:CDS
GCCAGAATTGGAAATGACGA+GGG 0.613573 7.3:+12340871 None:intergenic
TGGGGATCATGATAATGGGA+TGG 0.614869 7.3:-12339164 MS.gene007486:CDS
CTTCATTTATCTGCACGCCA+GGG 0.616151 7.3:-12339982 MS.gene007486:CDS
AGGTGATCAATAAGATGATG+TGG 0.618952 7.3:-12339006 MS.gene007486:CDS
AAATATGTAAAACAGGTCAC+CGG 0.619209 7.3:-12340818 MS.gene007486:CDS
TTGTATCTGCGGCTACAAGA+GGG 0.620058 7.3:-12340083 MS.gene007486:CDS
CTTGTAGCCGCAGATACAAG+AGG 0.624185 7.3:+12340087 None:intergenic
CCTTTGACCGCCATATGAAG+CGG 0.627600 7.3:+12339883 None:intergenic
AGAAACCACAGTTACAGAGT+TGG 0.633035 7.3:+12339234 None:intergenic
GGGCTTTGCCGGAAGTGGAG+AGG 0.635402 7.3:+12340918 None:intergenic
CAATGATCTCAACCAGCCAA+GGG 0.638090 7.3:-12339394 MS.gene007486:CDS
TCTTGCTGGGTGTCTCGACG+AGG 0.640598 7.3:+12340843 None:intergenic
CCAAACGTCACCGAAGAGTG+AGG 0.649993 7.3:-12338832 MS.gene007486:CDS
CAAAACACCTCTTGACCTTG+CGG 0.650691 7.3:-12339487 MS.gene007486:CDS
GGAAGTGGAGAGGAATAGGG+TGG 0.652742 7.3:+12340928 None:intergenic
ATATTGGAAGTGCTTCCGCA+AGG 0.654649 7.3:+12339472 None:intergenic
ACAAACGCCGCTTCATATGG+CGG 0.659247 7.3:-12339890 MS.gene007486:intron
AAAACGACCTTTCTCAGCTG+CGG 0.663709 7.3:+12340605 None:intergenic
GCAGCAAATCAAGGTCACAA+AGG 0.668138 7.3:-12340498 MS.gene007486:intron
TGGGTTCGGAAAGAGGAGCG+TGG 0.686370 7.3:+12340972 None:intergenic
CATTATCATGATCCCCACCA+GGG 0.695526 7.3:+12339170 None:intergenic
TGCTGCAACAAATGAAACTG+AGG 0.698675 7.3:+12338967 None:intergenic
GAAGTGGAGAGGAATAGGGT+GGG 0.699796 7.3:+12340929 None:intergenic
TGAGTTTGATGCTGAAGTTG+CGG 0.701626 7.3:-12340685 MS.gene007486:intron
GCAATGGATCAAAACCAGAG+CGG 0.786525 7.3:+12340526 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTATAGAAAAAAAATTG+TGG - chr7.3:12339351-12339370 MS.gene007486:CDS 15.0%
!! ATATTGTCAATATATTGTTA+GGG - chr7.3:12339813-12339832 MS.gene007486:CDS 15.0%
!! TGTTATATTACTCAAAATAA+AGG + chr7.3:12340139-12340158 None:intergenic 15.0%
!! CAAGAAAAAATATGTAAAAC+AGG - chr7.3:12338939-12338958 MS.gene007486:CDS 20.0%
!! GATATTGTCAATATATTGTT+AGG - chr7.3:12339812-12339831 MS.gene007486:CDS 20.0%
!! GTTATATATATTGTTGTGAA+TGG - chr7.3:12339580-12339599 MS.gene007486:intron 20.0%
!!! TTTACATATTTTTTCTTGCT+GGG + chr7.3:12338937-12338956 None:intergenic 20.0%
!!! TTTTACATATTTTTTCTTGC+TGG + chr7.3:12338938-12338957 None:intergenic 20.0%
! AAAACAAACAAGAATGTGAA+TGG - chr7.3:12340458-12340477 MS.gene007486:intron 25.0%
! AAACAAACAAGAATGTGAAT+GGG - chr7.3:12340459-12340478 MS.gene007486:intron 25.0%
! AATAGCATTAGAGATGAAAA+AGG + chr7.3:12340656-12340675 None:intergenic 25.0%
! ATATATATTGTTGTGAATGG+TGG - chr7.3:12339583-12339602 MS.gene007486:intron 25.0%
! GTCATTAACTTCATTAACAA+TGG + chr7.3:12339117-12339136 None:intergenic 25.0%
! GTTAATGAAGTTAATGACTT+GGG - chr7.3:12339119-12339138 MS.gene007486:CDS 25.0%
! TGTTAATGAAGTTAATGACT+TGG - chr7.3:12339118-12339137 MS.gene007486:CDS 25.0%
! TTCAAATAACTGTTGTTAGA+GGG - chr7.3:12340707-12340726 MS.gene007486:intron 25.0%
AAAATCATAACCTGACTGTT+TGG + chr7.3:12339527-12339546 None:intergenic 30.0%
AAATATGTAAAACAGGTCAC+CGG - chr7.3:12338946-12338965 MS.gene007486:CDS 30.0%
ATCTTATGATCCTAGTCAAT+TGG - chr7.3:12339730-12339749 MS.gene007486:intron 30.0%
ATCTTTCTTAATCTGAGTCA+TGG + chr7.3:12340411-12340430 None:intergenic 30.0%
CTTATTTCCATAAGCTCTTT+AGG - chr7.3:12339396-12339415 MS.gene007486:CDS 30.0%
GTTCAAATAACTGTTGTTAG+AGG - chr7.3:12340706-12340725 MS.gene007486:intron 30.0%
TCAAATAACTGTTGTTAGAG+GGG - chr7.3:12340708-12340727 MS.gene007486:intron 30.0%
TCCAAAATCTCTTCTGATAT+TGG + chr7.3:12340311-12340330 None:intergenic 30.0%
TGTCAATATATTGTTAGGGA+AGG - chr7.3:12339817-12339836 MS.gene007486:CDS 30.0%
TTTACAAGATAGTCCTTCTT+TGG + chr7.3:12339216-12339235 None:intergenic 30.0%
! TATTGCACTTTTCACTTCAT+TGG - chr7.3:12340672-12340691 MS.gene007486:CDS 30.0%
! TCCAATATCAGAAGAGATTT+TGG - chr7.3:12340307-12340326 MS.gene007486:intron 30.0%
! TCTTCAATGAGTATTGTCAT+AGG - chr7.3:12339307-12339326 MS.gene007486:intron 30.0%
! TGAGATTGATGATCAAATGA+TGG - chr7.3:12339041-12339060 MS.gene007486:CDS 30.0%
AAAGAGAAGATCTCAAGGAA+TGG - chr7.3:12340958-12340977 MS.gene007486:CDS 35.0%
AAGGACTCACTTATTCGTTA+TGG - chr7.3:12340335-12340354 MS.gene007486:intron 35.0%
AATCCTTGTTACTGTTGTAG+GGG - chr7.3:12340858-12340877 MS.gene007486:CDS 35.0%
AGGTGATCAATAAGATGATG+TGG - chr7.3:12340758-12340777 MS.gene007486:intron 35.0%
ATGAAGTGCATTCTTTCCAT+TGG + chr7.3:12339768-12339787 None:intergenic 35.0%
CAATCCTTGTTACTGTTGTA+GGG - chr7.3:12340857-12340876 MS.gene007486:CDS 35.0%
GCAGCATCTTATATAGTAGT+TGG - chr7.3:12340814-12340833 MS.gene007486:CDS 35.0%
TAGCTATCCTAAAGAGCTTA+TGG + chr7.3:12339406-12339425 None:intergenic 35.0%
TGACAATATCAACATATCCC+TGG + chr7.3:12339802-12339821 None:intergenic 35.0%
TTCATGGCGTAATTCTGATT+CGG - chr7.3:12340987-12341006 MS.gene007486:CDS 35.0%
TTGCATATTGCAGCAAATCA+AGG - chr7.3:12339257-12339276 MS.gene007486:intron 35.0%
! ACGTTTTTATCCAAACAGTC+AGG - chr7.3:12339514-12339533 MS.gene007486:CDS 35.0%
!! AGAAGAGATTTTGGAGATCA+AGG - chr7.3:12340316-12340335 MS.gene007486:intron 35.0%
!! TGATTTGCTGCAATATGCAA+TGG + chr7.3:12339257-12339276 None:intergenic 35.0%
ACAAGATAGTCCTTCTTTGG+TGG + chr7.3:12339213-12339232 None:intergenic 40.0%
AGAAACCACAGTTACAGAGT+TGG + chr7.3:12340533-12340552 None:intergenic 40.0%
AGCCAGAATATTCCTAACAG+CGG + chr7.3:12339022-12339041 None:intergenic 40.0%
AGTGTAACTGCAAAACCATG+TGG - chr7.3:12340066-12340085 MS.gene007486:CDS 40.0%
ATCCTTGTTACTGTTGTAGG+GGG - chr7.3:12340859-12340878 MS.gene007486:CDS 40.0%
ATGCTGAAGTTGCGGATATA+AGG - chr7.3:12339087-12339106 MS.gene007486:CDS 40.0%
CAAGGAATGGAACACATTCA+TGG - chr7.3:12340971-12340990 MS.gene007486:CDS 40.0%
CTAGCTATCTCCAATTGACT+AGG + chr7.3:12339743-12339762 None:intergenic 40.0%
CTATCTTGTAAAAACCGCTC+TGG - chr7.3:12339224-12339243 MS.gene007486:CDS 40.0%
GCAATCCTTGTTACTGTTGT+AGG - chr7.3:12340856-12340875 MS.gene007486:CDS 40.0%
GGAAGAAAGAGAAGATCTCA+AGG - chr7.3:12340953-12340972 MS.gene007486:CDS 40.0%
GGAGATAAAGTCTGAGAGAA+GGG - chr7.3:12340729-12340748 MS.gene007486:intron 40.0%
TATAACTAGCGAACTCCACA+TGG + chr7.3:12340084-12340103 None:intergenic 40.0%
TCAAAGGGTTAACTGTGAAG+TGG - chr7.3:12339897-12339916 MS.gene007486:CDS 40.0%
TCTCTTTCTTCCTCACTCTT+CGG + chr7.3:12340945-12340964 None:intergenic 40.0%
TGAGTTTGATGCTGAAGTTG+CGG - chr7.3:12339079-12339098 MS.gene007486:CDS 40.0%
TGCTGCAACAAATGAAACTG+AGG + chr7.3:12340800-12340819 None:intergenic 40.0%
TTGGAGATAGCTAGATCCAA+TGG - chr7.3:12339749-12339768 MS.gene007486:intron 40.0%
! AGTCCTTCTTTGGTGGTATA+AGG + chr7.3:12339206-12339225 None:intergenic 40.0%
! GCAAATGTCTTGATTAGCTC+TGG + chr7.3:12339641-12339660 None:intergenic 40.0%
! GTCCTTCTTTGGTGGTATAA+GGG + chr7.3:12339205-12339224 None:intergenic 40.0%
! TGTTTTGTGGTCTCTTGTGA+GGG + chr7.3:12340264-12340283 None:intergenic 40.0%
!! ACTTTTCACTTCATTGGCTG+TGG - chr7.3:12340678-12340697 MS.gene007486:CDS 40.0%
!! ATTGTAATGGGTGGTGTTCT+TGG - chr7.3:12340883-12340902 MS.gene007486:CDS 40.0%
!! GGTTTCTGTGCTATTTGCAA+CGG - chr7.3:12340546-12340565 MS.gene007486:CDS 40.0%
!! TCTTGATTAGCTCTGGATCA+TGG + chr7.3:12339634-12339653 None:intergenic 40.0%
AAAACGACCTTTCTCAGCTG+CGG + chr7.3:12339162-12339181 None:intergenic 45.0%
AAGTTGCTTCTTGCTGCTGA+TGG - chr7.3:12339922-12339941 MS.gene007486:CDS 45.0%
ACTTCATTTATCTGCACGCC+AGG - chr7.3:12339781-12339800 MS.gene007486:CDS 45.0%
CAAAACACCTCTTGACCTTG+CGG - chr7.3:12340277-12340296 MS.gene007486:intron 45.0%
CAATGATCTCAACCAGCCAA+GGG - chr7.3:12340370-12340389 MS.gene007486:intron 45.0%
CATTATCATGATCCCCACCA+GGG + chr7.3:12340597-12340616 None:intergenic 45.0%
CTCCCTTATACCACCAAAGA+AGG - chr7.3:12339200-12339219 MS.gene007486:CDS 45.0%
CTGGTGGGGATCATGATAAT+GGG - chr7.3:12340596-12340615 MS.gene007486:CDS 45.0%
CTTCATTTATCTGCACGCCA+GGG - chr7.3:12339782-12339801 MS.gene007486:CDS 45.0%
GAATGTGAATGGGATTGCCA+AGG - chr7.3:12340469-12340488 MS.gene007486:intron 45.0%
GCAATGGATCAAAACCAGAG+CGG + chr7.3:12339241-12339260 None:intergenic 45.0%
GCAGCAAATCAAGGTCACAA+AGG - chr7.3:12339266-12339285 MS.gene007486:intron 45.0%
GCAGTATTGCCAAACTTGTC+AGG + chr7.3:12339964-12339983 None:intergenic 45.0%
GCCAGAATTGGAAATGACGA+GGG + chr7.3:12338896-12338915 None:intergenic 45.0%
GCTCGAAGGACTGATAAGAA+AGG - chr7.3:12339851-12339870 MS.gene007486:intron 45.0%
GGAAATGACGAGGGATTTGT+TGG + chr7.3:12338887-12338906 None:intergenic 45.0%
GGGAGATAAAGTCTGAGAGA+AGG - chr7.3:12340728-12340747 MS.gene007486:intron 45.0%
GTCATGCTTCCTGACAAGTT+TGG - chr7.3:12339952-12339971 MS.gene007486:CDS 45.0%
GTTGGAGTTGGAGACAAGAA+GGG + chr7.3:12338869-12338888 None:intergenic 45.0%
GTTGTAGGGGGGATTGTAAT+GGG - chr7.3:12340871-12340890 MS.gene007486:CDS 45.0%
TCCCTCGTCATTTCCAATTC+TGG - chr7.3:12338892-12338911 MS.gene007486:CDS 45.0%
TCCTTGTTACTGTTGTAGGG+GGG - chr7.3:12340860-12340879 MS.gene007486:CDS 45.0%
TGCAACTCCTCTTGTATCTG+CGG - chr7.3:12339670-12339689 MS.gene007486:intron 45.0%
TGCCAGAATTGGAAATGACG+AGG + chr7.3:12338897-12338916 None:intergenic 45.0%
TGCCGCTGTTAGGAATATTC+TGG - chr7.3:12339017-12339036 MS.gene007486:CDS 45.0%
TGCTACCAACTCTGTAACTG+TGG - chr7.3:12340525-12340544 MS.gene007486:CDS 45.0%
TGTTGGAGTTGGAGACAAGA+AGG + chr7.3:12338870-12338889 None:intergenic 45.0%
TGTTGTAGGGGGGATTGTAA+TGG - chr7.3:12340870-12340889 MS.gene007486:CDS 45.0%
TTGTATCTGCGGCTACAAGA+GGG - chr7.3:12339681-12339700 MS.gene007486:intron 45.0%
! CTTTTTACCGCAGCTGAGAA+AGG - chr7.3:12339152-12339171 MS.gene007486:CDS 45.0%
! GTGTTTTGTGGTCTCTTGTG+AGG + chr7.3:12340265-12340284 None:intergenic 45.0%
! TCAAATGATGGAACGCTCAG+TGG - chr7.3:12339053-12339072 MS.gene007486:CDS 45.0%
! TTTCACTTCATTGGCTGTGG+TGG - chr7.3:12340681-12340700 MS.gene007486:CDS 45.0%
!! ATATTGGAAGTGCTTCCGCA+AGG + chr7.3:12340295-12340314 None:intergenic 45.0%
!! TGATAATGGGATGGCTGTGA+TGG - chr7.3:12340609-12340628 MS.gene007486:CDS 45.0%
!! TGGGGATCATGATAATGGGA+TGG - chr7.3:12340600-12340619 MS.gene007486:CDS 45.0%
!!! CAAGGTCAAGAGGTGTTTTG+TGG + chr7.3:12340277-12340296 None:intergenic 45.0%
ACAAACGCCGCTTCATATGG+CGG - chr7.3:12339874-12339893 MS.gene007486:intron 50.0%
ACCCTATTCCTCTCCACTTC+CGG - chr7.3:12338838-12338857 MS.gene007486:CDS 50.0%
AGAGGAATAGGGTGGGTCTA+GGG + chr7.3:12338831-12338850 None:intergenic 50.0%
AGGACAAACGCCGCTTCATA+TGG - chr7.3:12339871-12339890 MS.gene007486:intron 50.0%
ATGTAGCCACCAGGAAGAAG+AGG - chr7.3:12339989-12340008 MS.gene007486:CDS 50.0%
CCAATGATCTCAACCAGCCA+AGG - chr7.3:12340369-12340388 MS.gene007486:intron 50.0%
CCATTATCATGATCCCCACC+AGG + chr7.3:12340598-12340617 None:intergenic 50.0%
CCTGGTGGGGATCATGATAA+TGG - chr7.3:12340595-12340614 MS.gene007486:CDS 50.0%
CCTTTGACCGCCATATGAAG+CGG + chr7.3:12339884-12339903 None:intergenic 50.0%
CGCTTCATATGGCGGTCAAA+GGG - chr7.3:12339882-12339901 MS.gene007486:intron 50.0%
CTCAGCTGCGGTAAAAAGTG+CGG + chr7.3:12339150-12339169 None:intergenic 50.0%
CTTGTAGCCGCAGATACAAG+AGG + chr7.3:12339680-12339699 None:intergenic 50.0%
CTTGTATCTGCGGCTACAAG+AGG - chr7.3:12339680-12339699 MS.gene007486:intron 50.0%
GAAGTGGAGAGGAATAGGGT+GGG + chr7.3:12338838-12338857 None:intergenic 50.0%
GTCTGAGAGAAGGGTTACAG+AGG - chr7.3:12340738-12340757 MS.gene007486:intron 50.0%
TAACAAGGATTGCAGCCCAC+AGG + chr7.3:12340849-12340868 None:intergenic 50.0%
TACCTCTACCCTCTTCTTCC+TGG + chr7.3:12340001-12340020 None:intergenic 50.0%
TCCCCCCTACAACAGTAACA+AGG + chr7.3:12340864-12340883 None:intergenic 50.0%
TGTAGCCACCAGGAAGAAGA+GGG - chr7.3:12339990-12340009 MS.gene007486:CDS 50.0%
! ACTTTTCACAGTCCCTGGTG+GGG - chr7.3:12340582-12340601 MS.gene007486:CDS 50.0%
! CACTTTTCACAGTCCCTGGT+GGG - chr7.3:12340581-12340600 MS.gene007486:CDS 50.0%
! CCTTGGCTGGTTGAGATCAT+TGG + chr7.3:12340372-12340391 None:intergenic 50.0%
!! CTCGGTGTCATTATGACGAC+CGG + chr7.3:12338968-12338987 None:intergenic 50.0%
!! GACGAGGGATTTGTTGGAGT+TGG + chr7.3:12338881-12338900 None:intergenic 50.0%
!! TCTTGTGAGGGCATTCGCAT+TGG + chr7.3:12340252-12340271 None:intergenic 50.0%
AAGAAGGGCTTTGCCGGAAG+TGG + chr7.3:12338854-12338873 None:intergenic 55.0%
AGTGCTTCCGCAAGGTCAAG+AGG + chr7.3:12340287-12340306 None:intergenic 55.0%
ATGAATGGCCGTCGTGGGAA+GGG + chr7.3:12338757-12338776 None:intergenic 55.0%
ATTACTCCCCCTTCCCACGA+CGG - chr7.3:12338746-12338765 MS.gene007486:CDS 55.0%
CACCAGGAAGAAGAGGGTAG+AGG - chr7.3:12339996-12340015 MS.gene007486:CDS 55.0%
CCAAACGTCACCGAAGAGTG+AGG - chr7.3:12340932-12340951 MS.gene007486:CDS 55.0%
CCGCTTCATATGGCGGTCAA+AGG - chr7.3:12339881-12339900 MS.gene007486:intron 55.0%
CCTCACTCTTCGGTGACGTT+TGG + chr7.3:12340935-12340954 None:intergenic 55.0%
CTCTACCCTCTTCTTCCTGG+TGG + chr7.3:12339998-12340017 None:intergenic 55.0%
CTGCATTGCATGTAGCCACC+AGG - chr7.3:12339980-12339999 MS.gene007486:CDS 55.0%
GAGAGGAATAGGGTGGGTCT+AGG + chr7.3:12338832-12338851 None:intergenic 55.0%
GAGGAATAGGGTGGGTCTAG+GGG + chr7.3:12338830-12338849 None:intergenic 55.0%
GATCCATGAATGGCCGTCGT+GGG + chr7.3:12338762-12338781 None:intergenic 55.0%
GCCGGAAGTGGAGAGGAATA+GGG + chr7.3:12338842-12338861 None:intergenic 55.0%
GGAAGTGGAGAGGAATAGGG+TGG + chr7.3:12338839-12338858 None:intergenic 55.0%
GGAGACAAGAAGGGCTTTGC+CGG + chr7.3:12338860-12338879 None:intergenic 55.0%
TCAGTCCTTCGAGCAAGCTG+CGG + chr7.3:12339845-12339864 None:intergenic 55.0%
TGATCCATGAATGGCCGTCG+TGG + chr7.3:12338763-12338782 None:intergenic 55.0%
TGCCGGAAGTGGAGAGGAAT+AGG + chr7.3:12338843-12338862 None:intergenic 55.0%
TTGCGCGGCAAGATGAAGCT+CGG + chr7.3:12338986-12339005 None:intergenic 55.0%
! AGGGCATTCGCATTGGTGTC+GGG + chr7.3:12340245-12340264 None:intergenic 55.0%
! CACTTCATTGGCTGTGGTGG+TGG - chr7.3:12340684-12340703 MS.gene007486:CDS 55.0%
! GACGAGGCGTTTGCCAGAAT+TGG + chr7.3:12338908-12338927 None:intergenic 55.0%
! GCACTTTTCACAGTCCCTGG+TGG - chr7.3:12340580-12340599 MS.gene007486:CDS 55.0%
! GCAGCACTTTTCACAGTCCC+TGG - chr7.3:12340577-12340596 MS.gene007486:CDS 55.0%
! GTAGGGGGGATTGTAATGGG+TGG - chr7.3:12340874-12340893 MS.gene007486:CDS 55.0%
! GTTTTCCTCAGCTCGTCCCT+TGG + chr7.3:12340389-12340408 None:intergenic 55.0%
! TGCGGCTACAAGAGGGCATA+CGG - chr7.3:12339688-12339707 MS.gene007486:intron 55.0%
!! GAGGGCATTCGCATTGGTGT+CGG + chr7.3:12340246-12340265 None:intergenic 55.0%
AGTTGGTCGACGCAGCCTGT+GGG - chr7.3:12340831-12340850 MS.gene007486:CDS 60.0%
CAGTCCTTCGAGCAAGCTGC+GGG + chr7.3:12339844-12339863 None:intergenic 60.0%
CATGAATGGCCGTCGTGGGA+AGG + chr7.3:12338758-12338777 None:intergenic 60.0%
CCATTCATGGATCACCCCGC+CGG - chr7.3:12338769-12338788 MS.gene007486:CDS 60.0%
CTGCGCAAGTTGCACAGAGC+AGG - chr7.3:12340494-12340513 MS.gene007486:intron 60.0%
CTTCATCTTGCCGCGCAACG+CGG - chr7.3:12338988-12339007 MS.gene007486:CDS 60.0%
CTTCCCACGACGGCCATTCA+TGG - chr7.3:12338756-12338775 MS.gene007486:CDS 60.0%
GAATAGGGTGGGTCTAGGGG+TGG + chr7.3:12338827-12338846 None:intergenic 60.0%
GTGCAACTTGCGCAGCTCCT+TGG + chr7.3:12340489-12340508 None:intergenic 60.0%
TAGTTGGTCGACGCAGCCTG+TGG - chr7.3:12340830-12340849 MS.gene007486:CDS 60.0%
TCTAGGGGTGGTTGGGGTGT+TGG + chr7.3:12338815-12338834 None:intergenic 60.0%
TCTTGCTGGGTGTCTCGACG+AGG + chr7.3:12338924-12338943 None:intergenic 60.0%
TGAATGGCCGTCGTGGGAAG+GGG + chr7.3:12338756-12338775 None:intergenic 60.0%
TGGGTTCGGAAAGAGGAGCG+TGG + chr7.3:12338795-12338814 None:intergenic 60.0%
! CTAGGGGTGGTTGGGGTGTT+GGG + chr7.3:12338814-12338833 None:intergenic 60.0%
! TTCGGAAAGAGGAGCGTGGC+CGG + chr7.3:12338791-12338810 None:intergenic 60.0%
!! GGGGTGTTGGGTTCGGAAAG+AGG + chr7.3:12338802-12338821 None:intergenic 60.0%
!! GGTGGTTGGGGTGTTGGGTT+CGG + chr7.3:12338809-12338828 None:intergenic 60.0%
ACCAGCCAAGGGACGAGCTG+AGG - chr7.3:12340381-12340400 MS.gene007486:intron 65.0%
AGGGTGGGTCTAGGGGTGGT+TGG + chr7.3:12338823-12338842 None:intergenic 65.0%
CCGGCGGGGTGATCCATGAA+TGG + chr7.3:12338772-12338791 None:intergenic 65.0%
GAATGGCCGTCGTGGGAAGG+GGG + chr7.3:12338755-12338774 None:intergenic 65.0%
GCGGTGATGCTGCCGCTGTT+AGG - chr7.3:12339007-12339026 MS.gene007486:CDS 65.0%
GGGCTTTGCCGGAAGTGGAG+AGG + chr7.3:12338849-12338868 None:intergenic 65.0%
GGGTGGGTCTAGGGGTGGTT+GGG + chr7.3:12338822-12338841 None:intergenic 65.0%
GGTGGGTCTAGGGGTGGTTG+GGG + chr7.3:12338821-12338840 None:intergenic 65.0%
TCCTCAGCTCGTCCCTTGGC+TGG + chr7.3:12340385-12340404 None:intergenic 65.0%
! AGGACCCGCAGCTTGCTCGA+AGG - chr7.3:12339837-12339856 MS.gene007486:CDS 65.0%
GGCAGCATCACCGCGTTGCG+CGG + chr7.3:12339001-12339020 None:intergenic 70.0%
! AAAGAGGAGCGTGGCCGGCG+GGG + chr7.3:12338786-12338805 None:intergenic 70.0%
! GAAAGAGGAGCGTGGCCGGC+GGG + chr7.3:12338787-12338806 None:intergenic 70.0%
! GGAAAGAGGAGCGTGGCCGG+CGG + chr7.3:12338788-12338807 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.3 gene 12338745 12341041 12338745 ID=MS.gene007486
chr7.3 mRNA 12338745 12341041 12338745 ID=MS.gene007486.t1;Parent=MS.gene007486
chr7.3 exon 12340763 12341041 12340763 ID=MS.gene007486.t1.exon1;Parent=MS.gene007486.t1
chr7.3 CDS 12340763 12341041 12340763 ID=cds.MS.gene007486.t1;Parent=MS.gene007486.t1
chr7.3 exon 12340499 12340703 12340499 ID=MS.gene007486.t1.exon2;Parent=MS.gene007486.t1
chr7.3 CDS 12340499 12340703 12340499 ID=cds.MS.gene007486.t1;Parent=MS.gene007486.t1
chr7.3 exon 12339891 12340177 12339891 ID=MS.gene007486.t1.exon3;Parent=MS.gene007486.t1
chr7.3 CDS 12339891 12340177 12339891 ID=cds.MS.gene007486.t1;Parent=MS.gene007486.t1
chr7.3 exon 12339769 12339861 12339769 ID=MS.gene007486.t1.exon4;Parent=MS.gene007486.t1
chr7.3 CDS 12339769 12339861 12339769 ID=cds.MS.gene007486.t1;Parent=MS.gene007486.t1
chr7.3 exon 12339314 12339568 12339314 ID=MS.gene007486.t1.exon5;Parent=MS.gene007486.t1
chr7.3 CDS 12339314 12339568 12339314 ID=cds.MS.gene007486.t1;Parent=MS.gene007486.t1
chr7.3 exon 12338745 12339275 12338745 ID=MS.gene007486.t1.exon6;Parent=MS.gene007486.t1
chr7.3 CDS 12338745 12339275 12338745 ID=cds.MS.gene007486.t1;Parent=MS.gene007486.t1
Gene Sequence

>MS.gene007486

CATTACTCCCCCTTCCCACGACGGCCATTCATGGATCACCCCGCCGGCCACGCTCCTCTTTCCGAACCCAACACCCCAACCACCCCTAGACCCACCCTATTCCTCTCCACTTCCGGCAAAGCCCTTCTTGTCTCCAACTCCAACAAATCCCTCGTCATTTCCAATTCTGGCAAACGCCTCGTCGAGACACCCAGCAAGAAAAAATATGTAAAACAGGTCACCGGTCGTCATAATGACACCGAGCTTCATCTTGCCGCGCAACGCGGTGATGCTGCCGCTGTTAGGAATATTCTGGCTGAGATTGATGATCAAATGATGGAACGCTCAGTGGTGCTGAGTTTGATGCTGAAGTTGCGGATATAAGGTCTGCCATTGTTAATGAAGTTAATGACTTGGGTGAAACCGCACTTTTTACCGCAGCTGAGAAAGGTCGTTTTGATGTTGTTAAAGAACTTCTCCCTTATACCACCAAAGAAGGACTATCTTGTAAAAACCGCTCTGGTTTTGATCCATTGCATATTGCAGCAAATCAAGGTCACAAAGGTATAATATCAGACACATTTCTTCAATGAGTATTGTCATAGGCACTTGTTAGATATTTGTGATAGTTTATAGAAAAAAAATTGTGGCATGTCTATAAGCTGTTTTTAACTTATTTCCATAAGCTCTTTAGGATAGCTAATGAAAACAACTTATAACATATATGAAAACAATTGTTAGAGAAATAACTTGTACATAAGCACTTTTATTATTAGTGTTTATGCTAGAAACGTTTTTATCCAAACAGTCAGGTTATGATTTTGATATTGATTATTAGTTGTTCTTTGTAGACACTGTTATATATATTGTTGTGAATGGTGGCAGAGATTGTGCAGTTGCTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCGGCTACAAGAGGGCATACGGATATTGTTGAATTGTTACTATCTTATGATCCTAGTCAATTGGAGATAGCTAGATCCAATGGAAAGAATGCACTTCATTTATCTGCACGCCAGGGATATGTTGATATTGTCAATATATTGTTAGGGAAGGACCCGCAGCTTGCTCGAAGGACTGATAAGAAAGGACAAACGCCGCTTCATATGGCGGTCAAAGGGTTAACTGTGAAGTGGTGAAGTTGCTTCTTGCTGCTGATGGTGCAAGTGTCATGCTTCCTGACAAGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGAGGGTAGAGGTAATATCTTAGCTGCTCAATTTTAAACATTGATATGATACATAAAGTAGTGTAACTGCAAAACCATGTGGAGTTCGCTAGTTATATATGTCATATAGTTTTTACATCTACAACGATGCCTTTATTTTGAGTAATATAACAAACATGTCTGATTTTAACTTGAAGAGTGAACTAGTTATGACACACAAGAGTTGATGCAGATAGTGAATGAGTTGTTGCTTCTTCCCGACACCAATGCGAATGCCCTCACAAGAGACCACAAAACACCTCTTGACCTTGCGGAAGCACTTCCAATATCAGAAGAGATTTTGGAGATCAAGGACTCACTTATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAGCCAAGGGACGAGCTGAGGAAAACCATGACTCAGATTAAGAAAGATGTTTCTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAATGGGATTGCCAAGGAGCTGCGCAAGTTGCACAGAGCAGGAATCACAATGCTACCAACTCTGTAACTGTGGTTTCTGTGCTATTTGCAACGGTTGCATTTGCAGCACTTTTCACAGTCCCTGGTGGGGATCATGATAATGGGATGGCTGTGATGGTTCACACTGCATCTTTCAAGACCTTTTTCATCTCTAATGCTATTGCACTTTTCACTTCATTGGCTGTGGTGGTGGTTCAAATAACTGTTGTTAGAGGGGAGATAAAGTCTGAGAGAAGGGTTACAGAGGTGATCAATAAGATGATGTGGTTAGCGTCTGTGTGCACCTCAGTTTCATTTGTTGCAGCATCTTATATAGTAGTTGGTCGACGCAGCCTGTGGGCTGCAATCCTTGTTACTGTTGTAGGGGGGATTGTAATGGGTGGTGTTCTTGGAACAATGACATACTATGTTATCAAATCCAAACGTCACCGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGAATGGAACACATTCATGGCGTAATTCTGATTCGGAATCAGAAGTAAATCCAATTTATGCTATTTAA
Protein sequence

>MS.gene007486.t1

HYSPFPRRPFMDHPAGHAPLSEPNTPTTPRPTLFLSTSGKALLVSNSNKSLVISNSGKRLVETPSKKKYVKQVTGRHNDTELHLAAQRGDAAAFDAEVADIRSAIVNEVNDLGETALFTAAEKGRFDVVKELLPYTTKEGLSCKNRSGFDPLHIAANQGHKEIVQLLLDHDPELIKTFAQSNATPLVSAATRGHTDIVELLLSYDPSQLEIARSNGKNALHLSARQGYVDIVNILLGKDPQLARRTDKKGQTPLHMALLLAADGASVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNANALTRDHKTPLDLAEALPISEEILEIKDSLIRYGAVKANDLNQPRDELRKTMTQIKKDVSFQLEQTRKTNKNSRNHNATNSVTVVSVLFATVAFAALFTVPGGDHDNGMAVMVHTASFKTFFISNAIALFTSLAVVVVQITVVRGEIKSERRVTEVINKMMWLASVCTSVSFVAASYIVVGRRSLWAAILVTVVGGIVMGGVLGTMTYYVIKSKRHRRVRKKEKISRNGTHSWRNSDSESEVNPIYAI