AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene22482


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22482.t1 MTR_7g100430 98.797 582 7 0 1 582 1 582 0.0 1177
MS.gene22482.t1 MTR_1g115575 73.358 548 139 4 41 582 47 593 0.0 808
MS.gene22482.t1 MTR_2g096190 44.961 516 244 7 50 548 10 502 5.89e-128 386
MS.gene22482.t1 MTR_4g062100 44.814 511 244 8 56 551 19 506 1.14e-126 383
MS.gene22482.t1 MTR_7g117620 40.892 538 287 4 55 582 30 546 3.29e-117 358
MS.gene22482.t1 MTR_1g032100 43.542 480 253 6 120 582 53 531 6.43e-117 357
MS.gene22482.t1 MTR_7g100390 40.445 539 283 6 61 582 3 520 1.47e-109 338
MS.gene22482.t1 MTR_8g105260 40.083 484 264 7 120 582 60 538 4.41e-107 332
MS.gene22482.t1 MTR_2g101310 26.829 492 284 12 157 575 135 623 7.58e-35 139
MS.gene22482.t1 MTR_2g101310 27.556 225 161 2 112 335 24 247 1.84e-14 77.0
MS.gene22482.t1 MTR_1g069110 26.371 383 239 9 162 512 18 389 3.80e-22 100
MS.gene22482.t1 MTR_2g101320 25.175 429 283 10 122 514 137 563 6.74e-22 100
MS.gene22482.t1 MTR_2g101320 25.161 310 208 6 69 359 37 341 2.92e-14 76.3
MS.gene22482.t1 MTR_2g101320 25.207 242 157 5 106 335 18 247 6.17e-14 75.1
MS.gene22482.t1 MTR_3g105650 24.434 442 271 16 124 561 38 420 2.59e-19 91.3
MS.gene22482.t1 MTR_2g101310 25.341 367 204 9 157 453 135 501 3.56e-18 88.2
MS.gene22482.t1 MTR_2g101310 27.556 225 161 2 112 335 24 247 5.34e-14 75.1
MS.gene22482.t1 MTR_8g073260 25.469 373 205 14 69 437 8 311 1.39e-17 85.9
MS.gene22482.t1 MTR_5g043640 34.463 177 111 4 124 298 20 193 1.10e-16 80.5
MS.gene22482.t1 MTR_5g085810 24.286 420 256 14 162 524 273 687 5.40e-16 82.0
MS.gene22482.t1 MTR_8g080080 31.163 215 127 7 162 356 189 402 1.09e-15 80.9
MS.gene22482.t1 MTR_8g080080 26.374 273 169 10 65 316 133 394 1.16e-11 68.2
MS.gene22482.t1 MTR_6g027840 31.000 200 133 4 116 315 170 364 6.58e-15 78.2
MS.gene22482.t1 MTR_6g027840 30.918 207 135 6 111 314 129 330 2.83e-13 72.8
MS.gene22482.t1 MTR_3g058550 30.539 167 98 3 118 266 2 168 1.26e-13 70.9
MS.gene22482.t1 MTR_2g096760 30.806 211 124 5 120 314 11 215 1.49e-13 73.6
MS.gene22482.t1 MTR_8g467780 22.251 382 218 11 71 440 10 324 1.58e-13 73.6
MS.gene22482.t1 MTR_5g085480 26.502 283 170 10 66 314 87 365 1.68e-13 73.9
MS.gene22482.t1 MTR_1g089180 28.926 242 134 8 119 332 213 444 3.99e-13 72.0
MS.gene22482.t1 MTR_8g040930 22.951 366 184 11 146 472 12 318 2.58e-12 69.3
MS.gene22482.t1 MTR_8g041240 22.951 366 184 11 146 472 12 318 2.58e-12 69.3
MS.gene22482.t1 MTR_3g055310 27.143 140 95 2 399 531 301 440 6.01e-12 68.6
MS.gene22482.t1 MTR_3g055310 27.143 140 95 2 399 531 329 468 6.99e-12 68.6
MS.gene22482.t1 MTR_3g055310 27.143 140 95 2 399 531 249 388 7.09e-12 68.2
MS.gene22482.t1 MTR_3g055310 27.143 140 95 2 399 531 327 466 7.21e-12 68.2
MS.gene22482.t1 MTR_3g055310 27.143 140 95 2 399 531 186 325 8.85e-12 67.4
MS.gene22482.t1 MTR_3g055310 27.143 140 95 2 399 531 354 493 9.11e-12 68.2
MS.gene22482.t1 MTR_3g051060 29.518 166 100 3 118 266 54 219 2.45e-11 67.0
MS.gene22482.t1 MTR_5g026800 33.557 149 95 4 154 302 8 152 2.61e-11 64.7
MS.gene22482.t1 MTR_8g069880 24.339 378 203 14 124 472 40 363 5.63e-11 65.5
MS.gene22482.t1 MTR_1g112830 29.189 185 125 4 114 296 160 340 5.69e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene22482.t1 AT3G09550 73.129 588 141 4 11 582 28 614 0.0 838
MS.gene22482.t1 AT3G09550 73.129 588 141 4 11 582 21 607 0.0 837
MS.gene22482.t1 AT3G09550 73.129 588 141 4 11 582 21 607 0.0 837
MS.gene22482.t1 AT3G12360 69.739 575 163 5 11 582 24 590 0.0 786
MS.gene22482.t1 AT3G12360 69.739 575 163 5 11 582 12 578 0.0 785
MS.gene22482.t1 AT2G31820 42.256 523 267 5 65 573 148 649 2.00e-122 376
MS.gene22482.t1 AT5G60070 44.653 533 246 13 56 562 20 529 2.14e-119 364
MS.gene22482.t1 AT1G07710 43.194 551 267 8 56 582 15 543 6.93e-119 363
MS.gene22482.t1 AT1G07710 43.194 551 267 8 56 582 15 543 6.93e-119 363
MS.gene22482.t1 AT1G05640 42.505 527 267 8 65 576 110 615 5.43e-114 353
MS.gene22482.t1 AT2G01680 40.161 498 280 6 94 575 28 523 6.40e-112 345
MS.gene22482.t1 AT5G02620 40.434 507 272 6 56 548 5 495 2.89e-104 325
MS.gene22482.t1 AT5G02620 40.434 507 272 6 56 548 5 495 2.89e-104 325
MS.gene22482.t1 AT5G02620 40.434 507 272 6 56 548 5 495 2.89e-104 325
MS.gene22482.t1 AT5G02620 38.679 530 272 7 56 548 5 518 1.09e-98 311
MS.gene22482.t1 AT5G02620 38.679 530 272 7 56 548 5 518 1.09e-98 311
MS.gene22482.t1 AT1G34050 26.230 488 247 14 162 546 58 535 1.68e-33 135
MS.gene22482.t1 AT1G10340 24.578 533 315 13 68 544 37 538 1.01e-31 130
MS.gene22482.t1 AT1G10340 24.764 529 315 13 68 544 37 534 1.18e-31 129
MS.gene22482.t1 AT2G24600 25.000 548 313 18 68 549 37 552 4.14e-30 125
MS.gene22482.t1 AT2G24600 25.000 548 313 18 68 549 37 552 4.14e-30 125
MS.gene22482.t1 AT5G54710 25.394 508 322 16 103 565 82 577 9.60e-29 121
MS.gene22482.t1 AT5G54710 25.394 508 322 16 103 565 127 622 1.20e-28 121
MS.gene22482.t1 AT4G03500 23.913 506 336 14 69 533 103 600 1.50e-28 120
MS.gene22482.t1 AT4G03500 23.913 506 336 14 69 533 80 577 1.69e-28 120
MS.gene22482.t1 AT4G03500 23.913 506 336 14 69 533 80 577 1.69e-28 120
MS.gene22482.t1 AT1G03670 26.364 440 286 8 125 554 182 593 1.98e-25 111
MS.gene22482.t1 AT5G50140 23.387 496 321 12 122 561 26 518 3.24e-23 103
MS.gene22482.t1 AT4G03490 26.047 430 274 13 125 543 180 576 1.86e-22 102
MS.gene22482.t1 AT4G03490 26.303 422 267 13 127 537 182 570 2.30e-22 101
MS.gene22482.t1 AT4G03490 26.303 422 267 13 127 537 172 560 2.40e-22 101
MS.gene22482.t1 AT5G54700 25.797 345 188 8 223 535 34 342 2.19e-21 97.8
MS.gene22482.t1 AT4G03460 25.000 420 270 9 120 525 158 546 1.40e-20 96.3
MS.gene22482.t1 AT4G03470 25.098 510 336 15 42 532 138 620 1.45e-20 96.3
MS.gene22482.t1 AT4G03460 25.000 420 270 9 120 525 190 578 1.77e-20 95.9
MS.gene22482.t1 AT5G54700 27.778 324 187 10 249 550 20 318 4.74e-20 92.4
MS.gene22482.t1 AT4G14390 23.554 484 331 12 70 528 168 637 7.99e-19 90.9
MS.gene22482.t1 AT4G14390 23.602 483 331 12 70 528 149 617 5.38e-18 88.2
MS.gene22482.t1 AT2G03430 35.057 174 108 4 127 298 16 186 6.16e-18 84.0
MS.gene22482.t1 AT4G14390 23.602 483 331 12 70 528 168 636 8.21e-18 87.8
MS.gene22482.t1 AT3G18670 24.017 483 296 16 123 534 84 566 9.53e-18 87.4
MS.gene22482.t1 AT5G15500 30.049 203 121 5 125 309 40 239 1.86e-17 85.9
MS.gene22482.t1 AT4G03490 25.139 541 305 18 60 537 9 512 2.98e-17 85.9
MS.gene22482.t1 AT4G03490 25.046 547 310 18 60 543 19 528 3.63e-17 85.5
MS.gene22482.t1 AT1G14500 24.625 333 177 8 155 467 68 346 3.19e-16 81.6
MS.gene22482.t1 AT4G03480 25.641 351 227 8 155 474 309 656 4.16e-16 82.4
MS.gene22482.t1 AT4G03480 25.641 351 227 8 155 474 312 659 4.45e-16 82.0
MS.gene22482.t1 AT4G10720 22.727 440 272 15 125 552 39 422 1.41e-15 79.7
MS.gene22482.t1 AT5G51160 26.990 289 168 7 155 437 44 295 5.53e-15 77.8
MS.gene22482.t1 AT2G24600 23.776 429 242 13 68 442 37 434 8.95e-15 77.8
MS.gene22482.t1 AT2G24600 23.776 429 242 13 68 442 37 434 8.95e-15 77.8
MS.gene22482.t1 AT4G10720 23.714 350 223 9 125 469 39 349 9.67e-15 77.0
MS.gene22482.t1 AT4G03450 25.594 379 233 11 120 480 184 531 4.71e-14 75.5
MS.gene22482.t1 AT4G03450 25.594 379 233 11 120 480 184 531 9.27e-14 74.7
MS.gene22482.t1 AT4G14390 24.619 394 248 10 70 435 149 521 5.16e-13 72.0
MS.gene22482.t1 AT3G18670 28.169 142 96 1 399 534 480 621 8.06e-13 71.6
MS.gene22482.t1 AT4G03440 23.898 431 278 13 155 545 269 689 1.62e-12 70.9
MS.gene22482.t1 AT4G03440 23.898 431 278 13 155 545 262 682 1.66e-12 70.9
MS.gene22482.t1 AT4G03440 23.898 431 278 13 155 545 262 682 1.66e-12 70.9
MS.gene22482.t1 AT3G04710 28.516 256 152 9 43 280 30 272 1.34e-11 67.4
MS.gene22482.t1 AT3G04710 28.516 256 152 9 43 280 254 496 1.84e-11 67.4
MS.gene22482.t1 AT5G54610 28.342 187 121 3 125 300 39 223 2.88e-11 66.2
MS.gene22482.t1 AT2G14255 27.848 237 157 7 125 352 26 257 3.85e-11 66.2
MS.gene22482.t1 AT4G19150 32.143 140 92 3 162 301 20 156 4.34e-11 63.9

Find 155 sgRNAs with CRISPR-Local

Find 187 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATATCAGAAGAGATTT+TGG 0.120998 7.4:+9788711 MS.gene22482:CDS
GACTATTAAATAGCATAAAT+TGG 0.217594 7.4:-9789429 None:intergenic
AGTCCTTCTTTGGTGGTATA+AGG 0.227846 7.4:-9787603 None:intergenic
TCTAGGGGTGGTTGGGGTGT+TGG 0.234547 7.4:-9787211 None:intergenic
CTTTCTCAGCAGCTGTAAAA+AGG 0.236683 7.4:-9787551 None:intergenic
GATATTGTCAAGATATTGTT+AGG 0.241959 7.4:+9788215 MS.gene22482:CDS
GCAATCCTTGTTACTGTTGT+AGG 0.249078 7.4:+9789261 MS.gene22482:CDS
TCCCTCGTCATTTCCAATTC+TGG 0.254175 7.4:+9787291 MS.gene22482:CDS
TCCAAAATCTCTTCTGATAT+TGG 0.257559 7.4:-9788712 None:intergenic
GGGTGGGTCTAGGGGTGGTT+GGG 0.257724 7.4:-9787218 None:intergenic
CCTTGGCTGGTTGAGATCAT+TGG 0.276643 7.4:-9788773 None:intergenic
TACCTCTACCCTCTTCTTCC+TGG 0.277013 7.4:-9788402 None:intergenic
TTTACAAGATAGTCCTTCTT+TGG 0.279483 7.4:-9787613 None:intergenic
ATTGTAATGGGTGGTGTTCT+TGG 0.280140 7.4:+9789288 MS.gene22482:CDS
CTAGGGGTGGTTGGGGTGTT+GGG 0.284653 7.4:-9787210 None:intergenic
GACGAGGCGTTTGCCAGAAT+TGG 0.304324 7.4:-9787304 None:intergenic
GGTGGGTCTAGGGGTGGTTG+GGG 0.319326 7.4:-9787217 None:intergenic
CCTCACTCTTCGGTGACGTT+TGG 0.320261 7.4:-9789337 None:intergenic
CCTGGTGGGGATCATGATAA+TGG 0.324667 7.4:+9789000 MS.gene22482:CDS
TGCCGGAAGTGGAGAGGAAT+AGG 0.343790 7.4:-9787239 None:intergenic
GAGAGGAATAGGGTGGGTCT+AGG 0.344264 7.4:-9787228 None:intergenic
GGTGGTTGGGGTGTTGGGTT+CGG 0.348554 7.4:-9787205 None:intergenic
AGGGTGGGTCTAGGGGTGGT+TGG 0.353657 7.4:-9787219 None:intergenic
ATGCTGAAGTTGCGGATATA+AGG 0.362620 7.4:+9787487 MS.gene22482:CDS
GGAGACAAGAAGGGCTTTGC+CGG 0.364614 7.4:-9787256 None:intergenic
GACGAGGGATTTGTTGGAGT+TGG 0.371967 7.4:-9787277 None:intergenic
CAATCCTTGTTACTGTTGTA+GGG 0.374512 7.4:+9789262 MS.gene22482:CDS
CACTTCATTGGCTGTGGTGG+TGG 0.381287 7.4:+9789089 MS.gene22482:CDS
TCCTCAGCTCGTCCCTTGGC+TGG 0.388294 7.4:-9788786 None:intergenic
GAAAGAGGAGCGTGGCCGGC+GGG 0.390146 7.4:-9787183 None:intergenic
GAGGAATAGGGTGGGTCTAG+GGG 0.395584 7.4:-9787226 None:intergenic
AAGGACTCACTTATTCGTTA+TGG 0.399648 7.4:+9788739 MS.gene22482:CDS
GTCCTTCTTTGGTGGTATAA+GGG 0.400914 7.4:-9787602 None:intergenic
AGAGGAATAGGGTGGGTCTA+GGG 0.406165 7.4:-9787227 None:intergenic
GTTCAAATAACTGTTGTTAG+AGG 0.406250 7.4:+9789111 MS.gene22482:CDS
TCTCTTTCTTCCTCACTCTT+CGG 0.407155 7.4:-9789347 None:intergenic
CGCTTCATATGGCGGTCAAA+GGG 0.411725 7.4:+9788285 MS.gene22482:CDS
AAGTTGCTTCTTGCTGCTGA+TGG 0.419284 7.4:+9788326 MS.gene22482:CDS
GCGGTGATGCTGCCGCTGTC+AGG 0.425588 7.4:+9787406 MS.gene22482:CDS
GTCATGCTTCCTGACAAGTT+TGG 0.426669 7.4:+9788356 MS.gene22482:CDS
AAAACAAACAAGAATGTGAA+TGG 0.428260 7.4:+9788862 MS.gene22482:CDS
TGCCGCTGTCAGGAATATTC+TGG 0.433235 7.4:+9787416 MS.gene22482:CDS
GGAAATGACGAGGGATTTGT+TGG 0.436881 7.4:-9787283 None:intergenic
AAGAAGGGCTTTGCCGGAAG+TGG 0.440749 7.4:-9787250 None:intergenic
ATGAAGTGCATTCTTTCCAT+TGG 0.445344 7.4:-9788168 None:intergenic
GGAGATAAAGTCTGAGAGAA+GGG 0.447714 7.4:+9789134 MS.gene22482:CDS
TTCGGAAAGAGGAGCGTGGC+CGG 0.449506 7.4:-9787187 None:intergenic
TTCATGGCGTAATTCTGATT+CGG 0.456908 7.4:+9789392 MS.gene22482:CDS
CAAGGAATGGAACACATTCA+TGG 0.458877 7.4:+9789376 MS.gene22482:CDS
GAATAGGGTGGGTCTAGGGG+TGG 0.461324 7.4:-9787223 None:intergenic
AGGGCATTCGCATTGGTGTC+GGG 0.461867 7.4:-9788646 None:intergenic
GCAGTATTGCCAAACTTGTC+AGG 0.463768 7.4:-9788365 None:intergenic
ACTTCATTTATCTGCACGCC+AGG 0.464249 7.4:+9788184 MS.gene22482:CDS
GCAGCATCTTATATAGTAGT+TGG 0.467155 7.4:+9789219 MS.gene22482:CDS
CTGGTGGGGATCATGATAAT+GGG 0.468589 7.4:+9789001 MS.gene22482:CDS
GCAAATGTCTTGATTAGCTC+TGG 0.471908 7.4:-9788041 None:intergenic
ATCTTTCTTAATCTGAGTCA+TGG 0.474155 7.4:-9788812 None:intergenic
AGGACAAACGCCGCTTCATA+TGG 0.478041 7.4:+9788274 MS.gene22482:CDS
ACCCTATTCCTCTCCACTTC+CGG 0.480160 7.4:+9787237 MS.gene22482:CDS
GTGCAACTTGCGTAGCTCCT+TGG 0.480210 7.4:-9788890 None:intergenic
GAGGGCATTCGCATTGGTGT+CGG 0.481466 7.4:-9788647 None:intergenic
ACAAGATAGTCCTTCTTTGG+TGG 0.484767 7.4:-9787610 None:intergenic
AAGGTCTGCCATTGTTAATG+AGG 0.486750 7.4:+9787506 MS.gene22482:CDS
GGGGTGTTGGGTTCGGAAAG+AGG 0.490833 7.4:-9787198 None:intergenic
GGGAGATAAAGTCTGAGAGA+AGG 0.495604 7.4:+9789133 MS.gene22482:CDS
TCTTGTGAGGGCATTCGCAT+TGG 0.498367 7.4:-9788653 None:intergenic
GCCGGAAGTGGAGAGGAATA+GGG 0.499698 7.4:-9787238 None:intergenic
CCGCTTCATATGGCGGTCAA+AGG 0.504074 7.4:+9788284 MS.gene22482:CDS
TTCAAATAACTGTTGTTAGA+GGG 0.504770 7.4:+9789112 MS.gene22482:CDS
AATAGCATTAGAGATGAAAA+AGG 0.505791 7.4:-9789058 None:intergenic
TTTCACTTCATTGGCTGTGG+TGG 0.508039 7.4:+9789086 MS.gene22482:CDS
GGCAGCATCACCGCGTTGCG+CGG 0.508234 7.4:-9787397 None:intergenic
TCTTGATTAGCTCTGGATCA+TGG 0.513054 7.4:-9788034 None:intergenic
CTCCCTTATACCACCAAAGA+AGG 0.513242 7.4:+9787600 MS.gene22482:CDS
TAGTTGGTCGACGCAGCCTG+TGG 0.515142 7.4:+9789235 MS.gene22482:CDS
ATCCTTGTTACTGTTGTAGG+GGG 0.516823 7.4:+9789264 MS.gene22482:CDS
TGAGATTGATGATCAAATGA+TGG 0.517261 7.4:+9787440 MS.gene22482:CDS
TGTTGGAGTTGGAGACAAGA+AGG 0.518725 7.4:-9787266 None:intergenic
GGAAAGAGGAGCGTGGCCGG+CGG 0.518995 7.4:-9787184 None:intergenic
AAACAAACAAGAATGTGAAT+GGG 0.523203 7.4:+9788863 MS.gene22482:CDS
TGCGGCTACAAGAGGGCATA+CGG 0.525316 7.4:+9788091 MS.gene22482:CDS
TGTTAATGAGGTTAATGACT+TGG 0.526230 7.4:+9787518 MS.gene22482:CDS
CTACGCAAGTTGCACAGAGC+AGG 0.527125 7.4:+9788898 MS.gene22482:CDS
CTAGCTATCTCCAATTGACT+AGG 0.532153 7.4:-9788143 None:intergenic
AAAGAGGAGCGTGGCCGGCG+GGG 0.535243 7.4:-9787182 None:intergenic
GGAAGAAAGAGAAGATCTCA+AGG 0.537556 7.4:+9789358 MS.gene22482:CDS
TTGCATATTGCAGCAAATCA+AGG 0.538026 7.4:+9787657 MS.gene22482:CDS
CTCGGTGTCATTATGACGAC+CGG 0.538570 7.4:-9787364 None:intergenic
GGTTTCTGTGCTATTTGCAA+CGG 0.540421 7.4:+9788951 MS.gene22482:CDS
AAAGAGAAGATCTCAAGGAA+TGG 0.541144 7.4:+9789363 MS.gene22482:CDS
CAGTCCTTCGAGCAAGCTGC+GGG 0.546468 7.4:-9788244 None:intergenic
CCAATGATCTCAACCAGCCA+AGG 0.546813 7.4:+9788773 MS.gene22482:CDS
CTTGTATCTGCGGCTACAAG+AGG 0.552318 7.4:+9788083 MS.gene22482:CDS
CCATTATCATGATCCCCACC+AGG 0.552472 7.4:-9789000 None:intergenic
GTTAATGAGGTTAATGACTT+GGG 0.556052 7.4:+9787519 MS.gene22482:CDS
TTGGAGATAGCTAGATCCAA+TGG 0.558617 7.4:+9788152 MS.gene22482:CDS
TCAGTCCTTCGAGCAAGCTG+CGG 0.564899 7.4:-9788245 None:intergenic
CTCTACCCTCTTCTTCCTGG+TGG 0.567336 7.4:-9788399 None:intergenic
TTGCGCGGCAAGATGAAGCT+CGG 0.569249 7.4:-9787382 None:intergenic
TGCTACCAACTCTGTAACTG+TGG 0.569261 7.4:+9788930 MS.gene22482:CDS
GTTGGAGTTGGAGACAAGAA+GGG 0.573938 7.4:-9787265 None:intergenic
CTGCATTGCATGTAGCCACC+AGG 0.574200 7.4:+9788384 MS.gene22482:CDS
ACCAGCCAAGGGACGAGCTG+AGG 0.575224 7.4:+9788785 MS.gene22482:CDS
CACCAGGAAGAAGAGGGTAG+AGG 0.576801 7.4:+9788400 MS.gene22482:CDS
TGTCAAGATATTGTTAGGGA+AGG 0.577406 7.4:+9788220 MS.gene22482:CDS
TGCAACTCCTCTTGTATCTG+CGG 0.578451 7.4:+9788073 MS.gene22482:CDS
ATATTGTCAAGATATTGTTA+GGG 0.578514 7.4:+9788216 MS.gene22482:CDS
AATCCTTGTTACTGTTGTAG+GGG 0.579425 7.4:+9789263 MS.gene22482:CDS
TCAAATAACTGTTGTTAGAG+GGG 0.580153 7.4:+9789113 MS.gene22482:CDS
AGGACCCGCAGCTTGCTCGA+AGG 0.582573 7.4:+9788240 MS.gene22482:CDS
CCATTCATGGATCACCCCGC+CGG 0.583675 7.4:+9787168 None:intergenic
TGATTTGCTGCAATATGCAA+TGG 0.587424 7.4:-9787654 None:intergenic
TGTAGCCACCAGGAAGAAGA+GGG 0.588374 7.4:+9788394 MS.gene22482:CDS
TCCTTGTTACTGTTGTAGGG+GGG 0.588655 7.4:+9789265 MS.gene22482:CDS
TGACAATATCAACATATCCC+TGG 0.590389 7.4:-9788202 None:intergenic
TAACAAGGATTGCAGCCCAC+AGG 0.594685 7.4:-9789251 None:intergenic
GAGATTGATGATCAAATGAT+GGG 0.600031 7.4:+9787441 MS.gene22482:CDS
AGTTGGTCGACGCAGCCTGT+GGG 0.602868 7.4:+9789236 MS.gene22482:CDS
GCTCGAAGGACTGATAAGAA+AGG 0.603769 7.4:+9788254 MS.gene22482:CDS
CTTCATCTTGCCGCGCAACG+CGG 0.604158 7.4:+9787387 MS.gene22482:CDS
ATGTAGCCACCAGGAAGAAG+AGG 0.605868 7.4:+9788393 MS.gene22482:CDS
AGTGCTTCCGCAAGGTCAAG+AGG 0.607646 7.4:-9788688 None:intergenic
GTCATTAACCTCATTAACAA+TGG 0.608033 7.4:-9787514 None:intergenic
AGGTGATCAATAAGATGATG+TGG 0.610483 7.4:+9789163 MS.gene22482:CDS
TGATAATGGGATGGCTGTGA+TGG 0.612051 7.4:+9789014 MS.gene22482:CDS
TGCCAGAATTGGAAATGACG+AGG 0.612477 7.4:-9787293 None:intergenic
GTCTGAGAGAAGGGTTACAG+AGG 0.613101 7.4:+9789143 MS.gene22482:CDS
GCCAGAATTGGAAATGACGA+GGG 0.613573 7.4:-9787292 None:intergenic
TGGGGATCATGATAATGGGA+TGG 0.614869 7.4:+9789005 MS.gene22482:CDS
CTTCATTTATCTGCACGCCA+GGG 0.616151 7.4:+9788185 MS.gene22482:CDS
AAATATGTAAAACAGGTCAC+CGG 0.619209 7.4:+9787345 MS.gene22482:CDS
TTGTATCTGCGGCTACAAGA+GGG 0.620058 7.4:+9788084 MS.gene22482:CDS
CCTTTGACCGCCATATGAAG+CGG 0.622609 7.4:-9788284 None:intergenic
CTTGTAGCCGCAGATACAAG+AGG 0.624185 7.4:-9788080 None:intergenic
CAAAGGGGTTAACTGTGAAG+TGG 0.630420 7.4:+9788301 MS.gene22482:CDS
AGAAACCACAGTTACAGAGT+TGG 0.633035 7.4:-9788935 None:intergenic
GAATGTGAATGGGATTGCCA+AGG 0.633102 7.4:+9788873 MS.gene22482:CDS
GGGCTTTGCCGGAAGTGGAG+AGG 0.635402 7.4:-9787245 None:intergenic
CAATGATCTCAACCAGCCAA+GGG 0.638090 7.4:+9788774 MS.gene22482:CDS
TCTTGCTGGGTGTCTCGACG+AGG 0.640598 7.4:-9787320 None:intergenic
CCAAACGTCACCGAAGAGTG+AGG 0.649993 7.4:+9789337 MS.gene22482:CDS
CAAAACACCTCTTGACCTTG+CGG 0.650691 7.4:+9788681 MS.gene22482:CDS
GGAAGTGGAGAGGAATAGGG+TGG 0.652742 7.4:-9787235 None:intergenic
ATATTGGAAGTGCTTCCGCA+AGG 0.654649 7.4:-9788696 None:intergenic
AGCCAGAATATTCCTGACAG+CGG 0.659039 7.4:-9787418 None:intergenic
ACAAACGCCGCTTCATATGG+CGG 0.659247 7.4:+9788277 MS.gene22482:CDS
GCAGCAAATCAAGGTCACAA+AGG 0.668138 7.4:+9787666 MS.gene22482:CDS
GCTTCATATGGCGGTCAAAG+GGG 0.676524 7.4:+9788286 MS.gene22482:CDS
TGGGTTCGGAAAGAGGAGCG+TGG 0.686370 7.4:-9787191 None:intergenic
CAAATGATGGGAACGCTCAG+TGG 0.691348 7.4:+9787453 MS.gene22482:CDS
CATTATCATGATCCCCACCA+GGG 0.695526 7.4:-9788999 None:intergenic
TGCTGCAACAAATGAAACTG+AGG 0.698675 7.4:-9789202 None:intergenic
GAAGTGGAGAGGAATAGGGT+GGG 0.699796 7.4:-9787234 None:intergenic
TGAGTTTGATGCTGAAGTTG+CGG 0.701626 7.4:+9787479 MS.gene22482:CDS
GCAATGGATCAAAACCAGAG+CGG 0.786525 7.4:-9787638 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAGAAAAAAAAAAATTG+TGG + chr7.4:9787754-9787773 MS.gene22482:intron 10.0%
!! TGTTATATTACTCAAAATAA+AGG - chr7.4:9788543-9788562 None:intergenic 15.0%
!! ATATTGTCAAGATATTGTTA+GGG + chr7.4:9788216-9788235 MS.gene22482:CDS 20.0%
!! CAAGAAAAAATATGTAAAAC+AGG + chr7.4:9787338-9787357 MS.gene22482:CDS 20.0%
!! GTTATATATATTGTTGTGAA+TGG + chr7.4:9787983-9788002 MS.gene22482:intron 20.0%
!!! TTTACATATTTTTTCTTGCT+GGG - chr7.4:9787336-9787355 None:intergenic 20.0%
!!! TTTTACATATTTTTTCTTGC+TGG - chr7.4:9787337-9787356 None:intergenic 20.0%
! AAAACAAACAAGAATGTGAA+TGG + chr7.4:9788862-9788881 MS.gene22482:CDS 25.0%
! AAACAAACAAGAATGTGAAT+GGG + chr7.4:9788863-9788882 MS.gene22482:CDS 25.0%
! AATAGCATTAGAGATGAAAA+AGG - chr7.4:9789061-9789080 None:intergenic 25.0%
! ATATATATTGTTGTGAATGG+TGG + chr7.4:9787986-9788005 MS.gene22482:intron 25.0%
! GATATTGTCAAGATATTGTT+AGG + chr7.4:9788215-9788234 MS.gene22482:CDS 25.0%
! TTCAAATAACTGTTGTTAGA+GGG + chr7.4:9789112-9789131 MS.gene22482:CDS 25.0%
!! ATTTTATGATCCTAGTCAAT+TGG + chr7.4:9788133-9788152 MS.gene22482:CDS 25.0%
AAAATCATAACCTGACTGTT+TGG - chr7.4:9787930-9787949 None:intergenic 30.0%
AAATATGTAAAACAGGTCAC+CGG + chr7.4:9787345-9787364 MS.gene22482:CDS 30.0%
ATCTTTCTTAATCTGAGTCA+TGG - chr7.4:9788815-9788834 None:intergenic 30.0%
CTTATTTCCATAAGCTCTTT+AGG + chr7.4:9787799-9787818 MS.gene22482:intron 30.0%
GTCATTAACCTCATTAACAA+TGG - chr7.4:9787517-9787536 None:intergenic 30.0%
GTTAATGAGGTTAATGACTT+GGG + chr7.4:9787519-9787538 MS.gene22482:CDS 30.0%
GTTCAAATAACTGTTGTTAG+AGG + chr7.4:9789111-9789130 MS.gene22482:CDS 30.0%
TCAAATAACTGTTGTTAGAG+GGG + chr7.4:9789113-9789132 MS.gene22482:CDS 30.0%
TCCAAAATCTCTTCTGATAT+TGG - chr7.4:9788715-9788734 None:intergenic 30.0%
TGTTAATGAGGTTAATGACT+TGG + chr7.4:9787518-9787537 MS.gene22482:CDS 30.0%
TTTACAAGATAGTCCTTCTT+TGG - chr7.4:9787616-9787635 None:intergenic 30.0%
! GAGATTGATGATCAAATGAT+GGG + chr7.4:9787441-9787460 MS.gene22482:CDS 30.0%
! TATTGCACTTTTCACTTCAT+TGG + chr7.4:9789077-9789096 MS.gene22482:CDS 30.0%
! TCCAATATCAGAAGAGATTT+TGG + chr7.4:9788711-9788730 MS.gene22482:CDS 30.0%
! TCTTCAATGAGTATTGTCAT+AGG + chr7.4:9787707-9787726 MS.gene22482:intron 30.0%
! TGAGATTGATGATCAAATGA+TGG + chr7.4:9787440-9787459 MS.gene22482:CDS 30.0%
AAAGAGAAGATCTCAAGGAA+TGG + chr7.4:9789363-9789382 MS.gene22482:CDS 35.0%
AAGGACTCACTTATTCGTTA+TGG + chr7.4:9788739-9788758 MS.gene22482:CDS 35.0%
AATCCTTGTTACTGTTGTAG+GGG + chr7.4:9789263-9789282 MS.gene22482:CDS 35.0%
AGGTGATCAATAAGATGATG+TGG + chr7.4:9789163-9789182 MS.gene22482:CDS 35.0%
ATGAAGTGCATTCTTTCCAT+TGG - chr7.4:9788171-9788190 None:intergenic 35.0%
CAATCCTTGTTACTGTTGTA+GGG + chr7.4:9789262-9789281 MS.gene22482:CDS 35.0%
GCAGCATCTTATATAGTAGT+TGG + chr7.4:9789219-9789238 MS.gene22482:CDS 35.0%
TAGCTATCCTAAAGAGCTTA+TGG - chr7.4:9787809-9787828 None:intergenic 35.0%
TGACAATATCAACATATCCC+TGG - chr7.4:9788205-9788224 None:intergenic 35.0%
TGTCAAGATATTGTTAGGGA+AGG + chr7.4:9788220-9788239 MS.gene22482:CDS 35.0%
TTCATGGCGTAATTCTGATT+CGG + chr7.4:9789392-9789411 MS.gene22482:CDS 35.0%
TTGCATATTGCAGCAAATCA+AGG + chr7.4:9787657-9787676 MS.gene22482:CDS 35.0%
TTTCTCAGCAGCTGTAAAAA+GGG - chr7.4:9787553-9787572 None:intergenic 35.0%
! ACGTTTTTATCCAAACAGTC+AGG + chr7.4:9787917-9787936 MS.gene22482:intron 35.0%
!! AGAAGAGATTTTGGAGATCA+AGG + chr7.4:9788720-9788739 MS.gene22482:CDS 35.0%
!! TGATTTGCTGCAATATGCAA+TGG - chr7.4:9787657-9787676 None:intergenic 35.0%
AAGGTCTGCCATTGTTAATG+AGG + chr7.4:9787506-9787525 MS.gene22482:CDS 40.0%
ACAAGATAGTCCTTCTTTGG+TGG - chr7.4:9787613-9787632 None:intergenic 40.0%
AGAAACCACAGTTACAGAGT+TGG - chr7.4:9788938-9788957 None:intergenic 40.0%
AGTGTAACTGCAAAACCATG+AGG + chr7.4:9788470-9788489 MS.gene22482:intron 40.0%
ATCCTTGTTACTGTTGTAGG+GGG + chr7.4:9789264-9789283 MS.gene22482:CDS 40.0%
ATGCTGAAGTTGCGGATATA+AGG + chr7.4:9787487-9787506 MS.gene22482:CDS 40.0%
CAAGGAATGGAACACATTCA+TGG + chr7.4:9789376-9789395 MS.gene22482:CDS 40.0%
CTAGCTATCTCCAATTGACT+AGG - chr7.4:9788146-9788165 None:intergenic 40.0%
CTATCTTGTAAAAACCGCTC+TGG + chr7.4:9787624-9787643 MS.gene22482:CDS 40.0%
CTTTCTCAGCAGCTGTAAAA+AGG - chr7.4:9787554-9787573 None:intergenic 40.0%
GCAATCCTTGTTACTGTTGT+AGG + chr7.4:9789261-9789280 MS.gene22482:CDS 40.0%
GGAAGAAAGAGAAGATCTCA+AGG + chr7.4:9789358-9789377 MS.gene22482:CDS 40.0%
GGAGATAAAGTCTGAGAGAA+GGG + chr7.4:9789134-9789153 MS.gene22482:CDS 40.0%
TATAACTAGCGAACTCCTCA+TGG - chr7.4:9788488-9788507 None:intergenic 40.0%
TCTCTTTCTTCCTCACTCTT+CGG - chr7.4:9789350-9789369 None:intergenic 40.0%
TGAGTTTGATGCTGAAGTTG+CGG + chr7.4:9787479-9787498 MS.gene22482:CDS 40.0%
TGCTGCAACAAATGAAACTG+AGG - chr7.4:9789205-9789224 None:intergenic 40.0%
TTGGAGATAGCTAGATCCAA+TGG + chr7.4:9788152-9788171 MS.gene22482:CDS 40.0%
! AGTCCTTCTTTGGTGGTATA+AGG - chr7.4:9787606-9787625 None:intergenic 40.0%
! CTTTTTACAGCTGCTGAGAA+AGG + chr7.4:9787552-9787571 MS.gene22482:CDS 40.0%
! GCAAATGTCTTGATTAGCTC+TGG - chr7.4:9788044-9788063 None:intergenic 40.0%
! GTCCTTCTTTGGTGGTATAA+GGG - chr7.4:9787605-9787624 None:intergenic 40.0%
! TGTTTTGTGGTCTCTTGTGA+GGG - chr7.4:9788668-9788687 None:intergenic 40.0%
!! ACTTTTCACTTCATTGGCTG+TGG + chr7.4:9789083-9789102 MS.gene22482:CDS 40.0%
!! ATTGTAATGGGTGGTGTTCT+TGG + chr7.4:9789288-9789307 MS.gene22482:CDS 40.0%
!! GGTTTCTGTGCTATTTGCAA+CGG + chr7.4:9788951-9788970 MS.gene22482:CDS 40.0%
!! TCTTGATTAGCTCTGGATCA+TGG - chr7.4:9788037-9788056 None:intergenic 40.0%
AAGTTGCTTCTTGCTGCTGA+TGG + chr7.4:9788326-9788345 MS.gene22482:CDS 45.0%
ACTTCATTTATCTGCACGCC+AGG + chr7.4:9788184-9788203 MS.gene22482:CDS 45.0%
AGCCAGAATATTCCTGACAG+CGG - chr7.4:9787421-9787440 None:intergenic 45.0%
CAAAACACCTCTTGACCTTG+CGG + chr7.4:9788681-9788700 MS.gene22482:CDS 45.0%
CAAAGGGGTTAACTGTGAAG+TGG + chr7.4:9788301-9788320 MS.gene22482:CDS 45.0%
CAATGATCTCAACCAGCCAA+GGG + chr7.4:9788774-9788793 MS.gene22482:CDS 45.0%
CATTATCATGATCCCCACCA+GGG - chr7.4:9789002-9789021 None:intergenic 45.0%
CTCCCTTATACCACCAAAGA+AGG + chr7.4:9787600-9787619 MS.gene22482:CDS 45.0%
CTGGTGGGGATCATGATAAT+GGG + chr7.4:9789001-9789020 MS.gene22482:CDS 45.0%
CTTCATTTATCTGCACGCCA+GGG + chr7.4:9788185-9788204 MS.gene22482:CDS 45.0%
GAATGTGAATGGGATTGCCA+AGG + chr7.4:9788873-9788892 MS.gene22482:CDS 45.0%
GCAATGGATCAAAACCAGAG+CGG - chr7.4:9787641-9787660 None:intergenic 45.0%
GCAGCAAATCAAGGTCACAA+AGG + chr7.4:9787666-9787685 MS.gene22482:CDS 45.0%
GCAGTATTGCCAAACTTGTC+AGG - chr7.4:9788368-9788387 None:intergenic 45.0%
GCCAGAATTGGAAATGACGA+GGG - chr7.4:9787295-9787314 None:intergenic 45.0%
GCTCGAAGGACTGATAAGAA+AGG + chr7.4:9788254-9788273 MS.gene22482:CDS 45.0%
GGAAATGACGAGGGATTTGT+TGG - chr7.4:9787286-9787305 None:intergenic 45.0%
GGGAGATAAAGTCTGAGAGA+AGG + chr7.4:9789133-9789152 MS.gene22482:CDS 45.0%
GTCATGCTTCCTGACAAGTT+TGG + chr7.4:9788356-9788375 MS.gene22482:CDS 45.0%
GTTGGAGTTGGAGACAAGAA+GGG - chr7.4:9787268-9787287 None:intergenic 45.0%
GTTGTAGGGGGGATTGTAAT+GGG + chr7.4:9789276-9789295 MS.gene22482:CDS 45.0%
TCCCTCGTCATTTCCAATTC+TGG + chr7.4:9787291-9787310 MS.gene22482:CDS 45.0%
TCCTTGTTACTGTTGTAGGG+GGG + chr7.4:9789265-9789284 MS.gene22482:CDS 45.0%
TGCAACTCCTCTTGTATCTG+CGG + chr7.4:9788073-9788092 MS.gene22482:CDS 45.0%
TGCCAGAATTGGAAATGACG+AGG - chr7.4:9787296-9787315 None:intergenic 45.0%
TGCTACCAACTCTGTAACTG+TGG + chr7.4:9788930-9788949 MS.gene22482:CDS 45.0%
TGTTGGAGTTGGAGACAAGA+AGG - chr7.4:9787269-9787288 None:intergenic 45.0%
TGTTGTAGGGGGGATTGTAA+TGG + chr7.4:9789275-9789294 MS.gene22482:CDS 45.0%
TTGTATCTGCGGCTACAAGA+GGG + chr7.4:9788084-9788103 MS.gene22482:CDS 45.0%
! GTGTTTTGTGGTCTCTTGTG+AGG - chr7.4:9788669-9788688 None:intergenic 45.0%
! TTTCACTTCATTGGCTGTGG+TGG + chr7.4:9789086-9789105 MS.gene22482:CDS 45.0%
!! ATATTGGAAGTGCTTCCGCA+AGG - chr7.4:9788699-9788718 None:intergenic 45.0%
!! TGATAATGGGATGGCTGTGA+TGG + chr7.4:9789014-9789033 MS.gene22482:CDS 45.0%
!! TGGGGATCATGATAATGGGA+TGG + chr7.4:9789005-9789024 MS.gene22482:CDS 45.0%
!!! CAAGGTCAAGAGGTGTTTTG+TGG - chr7.4:9788681-9788700 None:intergenic 45.0%
ACAAACGCCGCTTCATATGG+CGG + chr7.4:9788277-9788296 MS.gene22482:CDS 50.0%
ACCCTATTCCTCTCCACTTC+CGG + chr7.4:9787237-9787256 MS.gene22482:CDS 50.0%
AGAGGAATAGGGTGGGTCTA+GGG - chr7.4:9787230-9787249 None:intergenic 50.0%
AGGACAAACGCCGCTTCATA+TGG + chr7.4:9788274-9788293 MS.gene22482:CDS 50.0%
ATGTAGCCACCAGGAAGAAG+AGG + chr7.4:9788393-9788412 MS.gene22482:CDS 50.0%
CCAATGATCTCAACCAGCCA+AGG + chr7.4:9788773-9788792 MS.gene22482:CDS 50.0%
CCATTATCATGATCCCCACC+AGG - chr7.4:9789003-9789022 None:intergenic 50.0%
CCTGGTGGGGATCATGATAA+TGG + chr7.4:9789000-9789019 MS.gene22482:CDS 50.0%
CCTTTGACCGCCATATGAAG+CGG - chr7.4:9788287-9788306 None:intergenic 50.0%
CGCTTCATATGGCGGTCAAA+GGG + chr7.4:9788285-9788304 MS.gene22482:CDS 50.0%
CTCAGCAGCTGTAAAAAGGG+CGG - chr7.4:9787550-9787569 None:intergenic 50.0%
CTTGTAGCCGCAGATACAAG+AGG - chr7.4:9788083-9788102 None:intergenic 50.0%
CTTGTATCTGCGGCTACAAG+AGG + chr7.4:9788083-9788102 MS.gene22482:CDS 50.0%
GAAGTGGAGAGGAATAGGGT+GGG - chr7.4:9787237-9787256 None:intergenic 50.0%
GCTTCATATGGCGGTCAAAG+GGG + chr7.4:9788286-9788305 MS.gene22482:CDS 50.0%
GTCTGAGAGAAGGGTTACAG+AGG + chr7.4:9789143-9789162 MS.gene22482:CDS 50.0%
TAACAAGGATTGCAGCCCAC+AGG - chr7.4:9789254-9789273 None:intergenic 50.0%
TACCTCTACCCTCTTCTTCC+TGG - chr7.4:9788405-9788424 None:intergenic 50.0%
TCCCCCCTACAACAGTAACA+AGG - chr7.4:9789269-9789288 None:intergenic 50.0%
TGCCGCTGTCAGGAATATTC+TGG + chr7.4:9787416-9787435 MS.gene22482:CDS 50.0%
TGTAGCCACCAGGAAGAAGA+GGG + chr7.4:9788394-9788413 MS.gene22482:CDS 50.0%
! ACTTTTCACAGTCCCTGGTG+GGG + chr7.4:9788987-9789006 MS.gene22482:CDS 50.0%
! CAAATGATGGGAACGCTCAG+TGG + chr7.4:9787453-9787472 MS.gene22482:CDS 50.0%
! CACTTTTCACAGTCCCTGGT+GGG + chr7.4:9788986-9789005 MS.gene22482:CDS 50.0%
! CCTTGGCTGGTTGAGATCAT+TGG - chr7.4:9788776-9788795 None:intergenic 50.0%
!! CTCGGTGTCATTATGACGAC+CGG - chr7.4:9787367-9787386 None:intergenic 50.0%
!! GACGAGGGATTTGTTGGAGT+TGG - chr7.4:9787280-9787299 None:intergenic 50.0%
!! TCTTGTGAGGGCATTCGCAT+TGG - chr7.4:9788656-9788675 None:intergenic 50.0%
AAGAAGGGCTTTGCCGGAAG+TGG - chr7.4:9787253-9787272 None:intergenic 55.0%
AGTGCTTCCGCAAGGTCAAG+AGG - chr7.4:9788691-9788710 None:intergenic 55.0%
CACCAGGAAGAAGAGGGTAG+AGG + chr7.4:9788400-9788419 MS.gene22482:CDS 55.0%
CCAAACGTCACCGAAGAGTG+AGG + chr7.4:9789337-9789356 MS.gene22482:CDS 55.0%
CCGCTTCATATGGCGGTCAA+AGG + chr7.4:9788284-9788303 MS.gene22482:CDS 55.0%
CCTCACTCTTCGGTGACGTT+TGG - chr7.4:9789340-9789359 None:intergenic 55.0%
CTACGCAAGTTGCACAGAGC+AGG + chr7.4:9788898-9788917 MS.gene22482:CDS 55.0%
CTCTACCCTCTTCTTCCTGG+TGG - chr7.4:9788402-9788421 None:intergenic 55.0%
CTGCATTGCATGTAGCCACC+AGG + chr7.4:9788384-9788403 MS.gene22482:CDS 55.0%
GAGAGGAATAGGGTGGGTCT+AGG - chr7.4:9787231-9787250 None:intergenic 55.0%
GAGGAATAGGGTGGGTCTAG+GGG - chr7.4:9787229-9787248 None:intergenic 55.0%
GCCGGAAGTGGAGAGGAATA+GGG - chr7.4:9787241-9787260 None:intergenic 55.0%
GGAAGTGGAGAGGAATAGGG+TGG - chr7.4:9787238-9787257 None:intergenic 55.0%
GGAGACAAGAAGGGCTTTGC+CGG - chr7.4:9787259-9787278 None:intergenic 55.0%
GTGCAACTTGCGTAGCTCCT+TGG - chr7.4:9788893-9788912 None:intergenic 55.0%
TCAGTCCTTCGAGCAAGCTG+CGG - chr7.4:9788248-9788267 None:intergenic 55.0%
TGCCGGAAGTGGAGAGGAAT+AGG - chr7.4:9787242-9787261 None:intergenic 55.0%
TTGCGCGGCAAGATGAAGCT+CGG - chr7.4:9787385-9787404 None:intergenic 55.0%
! AGGGCATTCGCATTGGTGTC+GGG - chr7.4:9788649-9788668 None:intergenic 55.0%
! CACTTCATTGGCTGTGGTGG+TGG + chr7.4:9789089-9789108 MS.gene22482:CDS 55.0%
! GACGAGGCGTTTGCCAGAAT+TGG - chr7.4:9787307-9787326 None:intergenic 55.0%
! GCACTTTTCACAGTCCCTGG+TGG + chr7.4:9788985-9789004 MS.gene22482:CDS 55.0%
! GCAGCACTTTTCACAGTCCC+TGG + chr7.4:9788982-9789001 MS.gene22482:CDS 55.0%
! GTAGGGGGGATTGTAATGGG+TGG + chr7.4:9789279-9789298 MS.gene22482:CDS 55.0%
! GTTTTCCTCAGCTCGTCCCT+TGG - chr7.4:9788793-9788812 None:intergenic 55.0%
! TGCGGCTACAAGAGGGCATA+CGG + chr7.4:9788091-9788110 MS.gene22482:CDS 55.0%
!! GAGGGCATTCGCATTGGTGT+CGG - chr7.4:9788650-9788669 None:intergenic 55.0%
AGTTGGTCGACGCAGCCTGT+GGG + chr7.4:9789236-9789255 MS.gene22482:CDS 60.0%
CAGTCCTTCGAGCAAGCTGC+GGG - chr7.4:9788247-9788266 None:intergenic 60.0%
CTTCATCTTGCCGCGCAACG+CGG + chr7.4:9787387-9787406 MS.gene22482:CDS 60.0%
GAATAGGGTGGGTCTAGGGG+TGG - chr7.4:9787226-9787245 None:intergenic 60.0%
TAGTTGGTCGACGCAGCCTG+TGG + chr7.4:9789235-9789254 MS.gene22482:CDS 60.0%
TCTAGGGGTGGTTGGGGTGT+TGG - chr7.4:9787214-9787233 None:intergenic 60.0%
TCTTGCTGGGTGTCTCGACG+AGG - chr7.4:9787323-9787342 None:intergenic 60.0%
TGGGTTCGGAAAGAGGAGCG+TGG - chr7.4:9787194-9787213 None:intergenic 60.0%
! CTAGGGGTGGTTGGGGTGTT+GGG - chr7.4:9787213-9787232 None:intergenic 60.0%
! TTCGGAAAGAGGAGCGTGGC+CGG - chr7.4:9787190-9787209 None:intergenic 60.0%
!! GGGGTGTTGGGTTCGGAAAG+AGG - chr7.4:9787201-9787220 None:intergenic 60.0%
!! GGTGGTTGGGGTGTTGGGTT+CGG - chr7.4:9787208-9787227 None:intergenic 60.0%
ACCAGCCAAGGGACGAGCTG+AGG + chr7.4:9788785-9788804 MS.gene22482:CDS 65.0%
AGGGTGGGTCTAGGGGTGGT+TGG - chr7.4:9787222-9787241 None:intergenic 65.0%
GGGCTTTGCCGGAAGTGGAG+AGG - chr7.4:9787248-9787267 None:intergenic 65.0%
GGGTGGGTCTAGGGGTGGTT+GGG - chr7.4:9787221-9787240 None:intergenic 65.0%
GGTGGGTCTAGGGGTGGTTG+GGG - chr7.4:9787220-9787239 None:intergenic 65.0%
TCCTCAGCTCGTCCCTTGGC+TGG - chr7.4:9788789-9788808 None:intergenic 65.0%
! AGGACCCGCAGCTTGCTCGA+AGG + chr7.4:9788240-9788259 MS.gene22482:CDS 65.0%
GCGGTGATGCTGCCGCTGTC+AGG + chr7.4:9787406-9787425 MS.gene22482:CDS 70.0%
GGCAGCATCACCGCGTTGCG+CGG - chr7.4:9787400-9787419 None:intergenic 70.0%
! AAAGAGGAGCGTGGCCGGCG+GGG - chr7.4:9787185-9787204 None:intergenic 70.0%
! GAAAGAGGAGCGTGGCCGGC+GGG - chr7.4:9787186-9787205 None:intergenic 70.0%
! GGAAAGAGGAGCGTGGCCGG+CGG - chr7.4:9787187-9787206 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 9787174 9789446 9787174 ID=MS.gene22482
chr7.4 mRNA 9787174 9789446 9787174 ID=MS.gene22482.t1;Parent=MS.gene22482
chr7.4 exon 9787174 9787687 9787174 ID=MS.gene22482.t1.exon1;Parent=MS.gene22482.t1
chr7.4 CDS 9787174 9787687 9787174 ID=cds.MS.gene22482.t1;Parent=MS.gene22482.t1
chr7.4 exon 9788012 9788421 9788012 ID=MS.gene22482.t1.exon2;Parent=MS.gene22482.t1
chr7.4 CDS 9788012 9788421 9788012 ID=cds.MS.gene22482.t1;Parent=MS.gene22482.t1
chr7.4 exon 9788622 9789446 9788622 ID=MS.gene22482.t1.exon3;Parent=MS.gene22482.t1
chr7.4 CDS 9788622 9789446 9788622 ID=cds.MS.gene22482.t1;Parent=MS.gene22482.t1
Gene Sequence

>MS.gene22482

ATGGATCACCCCGCCGGCCACGCTCCTCTTTCCGAACCCAACACCCCAACCACCCCTAGACCCACCCTATTCCTCTCCACTTCCGGCAAAGCCCTTCTTGTCTCCAACTCCAACAAATCCCTCGTCATTTCCAATTCTGGCAAACGCCTCGTCGAGACACCCAGCAAGAAAAAATATGTAAAACAGGTCACCGGTCGTCATAATGACACCGAGCTTCATCTTGCCGCGCAACGCGGTGATGCTGCCGCTGTCAGGAATATTCTGGCTGAGATTGATGATCAAATGATGGGAACGCTCAGTGGTGCTGAGTTTGATGCTGAAGTTGCGGATATAAGGTCTGCCATTGTTAATGAGGTTAATGACTTGGGTGAAACCGCCCTTTTTACAGCTGCTGAGAAAGGTCGTTTTGATGTTGTTAAAGAGCTTCTCCCTTATACCACCAAAGAAGGACTATCTTGTAAAAACCGCTCTGGTTTTGATCCATTGCATATTGCAGCAAATCAAGGTCACAAAGGTATAATATCAGACACATTTCTTCAATGAGTATTGTCATAGGCACTTGTTAGATATTTGTGATAGTTTATAGAAAAAAAAAAATTGTGGCATGTCTATAAGCTGTTTTTAACTTATTTCCATAAGCTCTTTAGGATAGCTAATGAAAACAACTTATAACATATATGAAAACAATTGTTAGAGAAATAACTTGTACATAAGCACTTTTATTATTAGTGTTTATGCTAGAAACGTTTTTATCCAAACAGTCAGGTTATGATTTTGATATTGATTATTAGTTGTTCTTTGTAGACACTGTTATATATATTGTTGTGAATGGTGGCAGAGATTGTGCAGTTGCTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCGGCTACAAGAGGGCATACGGATATTGTTGAATTGTTACTATTTTATGATCCTAGTCAATTGGAGATAGCTAGATCCAATGGAAAGAATGCACTTCATTTATCTGCACGCCAGGGATATGTTGATATTGTCAAGATATTGTTAGGGAAGGACCCGCAGCTTGCTCGAAGGACTGATAAGAAAGGACAAACGCCGCTTCATATGGCGGTCAAAGGGGTTAACTGTGAAGTGGTGAAGTTGCTTCTTGCTGCTGATGGTGCAAGTGTCATGCTTCCTGACAAGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGAGGGTAGAGGTAATATCTTAGCTGCTCAATTTTAAACATTGATATGATACATAAAGTAGTGTAACTGCAAAACCATGAGGAGTTCGCTAGTTATATATGTCATATAGTTTTTACATCTACAACGATGCCTTTATTTTGAGTAATATAACAAACATGTCTGATTTTAACTTGAAGAGTGAACTAGTTATGACACACAAGAGTTGATGCAGATAGTGAATGAGTTGTTGCTTCTTCCCGACACCAATGCGAATGCCCTCACAAGAGACCACAAAACACCTCTTGACCTTGCGGAAGCACTTCCAATATCAGAAGAGATTTTGGAGATCAAGGACTCACTTATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAGCCAAGGGACGAGCTGAGGAAAACCATGACTCAGATTAAGAAAGATGTTTCTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAATGGGATTGCCAAGGAGCTACGCAAGTTGCACAGAGCAGGAATCAACAATGCTACCAACTCTGTAACTGTGGTTTCTGTGCTATTTGCAACGGTTGCATTTGCAGCACTTTTCACAGTCCCTGGTGGGGATCATGATAATGGGATGGCTGTGATGGTTCACACTGCATCTTTCAAGACCTTTTTCATCTCTAATGCTATTGCACTTTTCACTTCATTGGCTGTGGTGGTGGTTCAAATAACTGTTGTTAGAGGGGAGATAAAGTCTGAGAGAAGGGTTACAGAGGTGATCAATAAGATGATGTGGCTAGCGTCTGTGTGCACCTCAGTTTCATTTGTTGCAGCATCTTATATAGTAGTTGGTCGACGCAGCCTGTGGGCTGCAATCCTTGTTACTGTTGTAGGGGGGATTGTAATGGGTGGTGTTCTTGGAACAATGACATACTATGTTATCAAATCCAAACGTCACCGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGAATGGAACACATTCATGGCGTAATTCTGATTCGGAATCAGAAGTAAATCCAATTTATGCTATTTAA

Protein sequence

>MS.gene22482.t1

MDHPAGHAPLSEPNTPTTPRPTLFLSTSGKALLVSNSNKSLVISNSGKRLVETPSKKKYVKQVTGRHNDTELHLAAQRGDAAAVRNILAEIDDQMMGTLSGAEFDAEVADIRSAIVNEVNDLGETALFTAAEKGRFDVVKELLPYTTKEGLSCKNRSGFDPLHIAANQGHKEIVQLLLDHDPELIKTFAQSNATPLVSAATRGHTDIVELLLFYDPSQLEIARSNGKNALHLSARQGYVDIVKILLGKDPQLARRTDKKGQTPLHMAVKGVNCEVVKLLLAADGASVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNANALTRDHKTPLDLAEALPISEEILEIKDSLIRYGAVKANDLNQPRDELRKTMTQIKKDVSFQLEQTRKTNKNVNGIAKELRKLHRAGINNATNSVTVVSVLFATVAFAALFTVPGGDHDNGMAVMVHTASFKTFFISNAIALFTSLAVVVVQITVVRGEIKSERRVTEVINKMMWLASVCTSVSFVAASYIVVGRRSLWAAILVTVVGGIVMGGVLGTMTYYVIKSKRHRRVRKKEKISRNGTHSWRNSDSESEVNPIYAI