AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene018518


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018518.t1 MTR_7g100430 98.797 582 7 0 1 582 1 582 0.0 1178
MS.gene018518.t1 MTR_1g115575 73.358 548 139 4 41 582 47 593 0.0 809
MS.gene018518.t1 MTR_2g096190 44.767 516 245 7 50 548 10 502 1.25e-127 385
MS.gene018518.t1 MTR_4g062100 44.618 511 245 8 56 551 19 506 2.97e-126 382
MS.gene018518.t1 MTR_7g117620 40.706 538 288 4 55 582 30 546 6.34e-117 358
MS.gene018518.t1 MTR_1g032100 43.333 480 254 6 120 582 53 531 1.27e-116 357
MS.gene018518.t1 MTR_7g100390 40.260 539 284 6 61 582 3 520 4.25e-109 337
MS.gene018518.t1 MTR_8g105260 39.876 484 265 7 120 582 60 538 6.28e-107 332
MS.gene018518.t1 MTR_2g101310 27.033 492 283 12 157 575 135 623 4.69e-36 143
MS.gene018518.t1 MTR_2g101310 25.991 227 132 4 112 303 24 249 1.45e-14 77.4
MS.gene018518.t1 MTR_2g101320 25.408 429 282 10 122 514 137 563 1.56e-22 102
MS.gene018518.t1 MTR_2g101320 25.161 310 208 6 69 359 37 341 9.64e-15 77.8
MS.gene018518.t1 MTR_2g101320 25.207 242 157 5 106 335 18 247 8.16e-14 74.7
MS.gene018518.t1 MTR_1g069110 26.110 383 240 9 162 512 18 389 5.18e-22 99.8
MS.gene018518.t1 MTR_2g101310 25.613 367 203 9 157 453 135 501 2.88e-19 91.7
MS.gene018518.t1 MTR_2g101310 25.991 227 132 4 112 303 24 249 3.85e-14 75.5
MS.gene018518.t1 MTR_3g105650 24.208 442 272 16 124 561 38 420 4.55e-18 87.4
MS.gene018518.t1 MTR_5g043640 34.463 177 111 4 124 298 20 193 8.62e-17 80.9
MS.gene018518.t1 MTR_8g073260 25.201 373 206 14 69 437 8 311 1.63e-16 82.8
MS.gene018518.t1 MTR_5g085810 24.286 420 256 14 162 524 273 687 3.52e-16 82.4
MS.gene018518.t1 MTR_8g080080 30.918 207 123 6 162 348 189 395 2.78e-15 79.7
MS.gene018518.t1 MTR_8g080080 26.007 273 170 10 65 316 133 394 3.49e-12 69.7
MS.gene018518.t1 MTR_6g027840 31.000 200 133 4 116 315 170 364 2.73e-14 76.3
MS.gene018518.t1 MTR_6g027840 30.918 207 135 6 111 314 129 330 3.01e-13 72.8
MS.gene018518.t1 MTR_3g058550 30.539 167 98 3 118 266 2 168 6.57e-14 71.6
MS.gene018518.t1 MTR_5g085480 26.502 283 170 10 66 314 87 365 8.02e-14 75.1
MS.gene018518.t1 MTR_1g089180 28.926 242 134 8 119 332 213 444 2.93e-13 72.8
MS.gene018518.t1 MTR_2g096760 30.332 211 125 5 120 314 11 215 3.16e-13 72.4
MS.gene018518.t1 MTR_8g040930 22.951 366 184 11 146 472 12 318 3.59e-12 68.6
MS.gene018518.t1 MTR_8g041240 22.951 366 184 11 146 472 12 318 3.59e-12 68.6
MS.gene018518.t1 MTR_3g055310 27.143 140 95 2 399 531 301 440 6.44e-12 68.6
MS.gene018518.t1 MTR_3g055310 27.143 140 95 2 399 531 329 468 6.99e-12 68.6
MS.gene018518.t1 MTR_3g055310 27.068 133 90 2 406 531 256 388 7.61e-12 67.8
MS.gene018518.t1 MTR_1g112830 29.730 185 124 4 114 296 160 340 7.66e-12 68.6
MS.gene018518.t1 MTR_3g055310 27.143 140 95 2 399 531 327 466 7.66e-12 68.2
MS.gene018518.t1 MTR_3g055310 27.143 140 95 2 399 531 354 493 8.80e-12 68.2
MS.gene018518.t1 MTR_3g055310 27.143 140 95 2 399 531 186 325 9.26e-12 67.4
MS.gene018518.t1 MTR_3g051060 29.518 166 100 3 118 266 54 219 1.08e-11 68.2
MS.gene018518.t1 MTR_8g467780 21.728 382 220 11 71 440 10 324 1.18e-11 67.4
MS.gene018518.t1 MTR_5g026800 33.557 149 95 4 154 302 8 152 4.89e-11 63.9
MS.gene018518.t1 MTR_8g069880 24.074 378 204 14 124 472 40 363 8.07e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene018518.t1 AT3G09550 73.129 588 141 4 11 582 28 614 0.0 838
MS.gene018518.t1 AT3G09550 73.129 588 141 4 11 582 21 607 0.0 837
MS.gene018518.t1 AT3G09550 73.129 588 141 4 11 582 21 607 0.0 837
MS.gene018518.t1 AT3G12360 69.739 575 163 5 11 582 24 590 0.0 786
MS.gene018518.t1 AT3G12360 69.739 575 163 5 11 582 12 578 0.0 785
MS.gene018518.t1 AT2G31820 42.065 523 268 5 65 573 148 649 3.07e-122 375
MS.gene018518.t1 AT5G60070 44.465 533 247 13 56 562 20 529 3.48e-119 364
MS.gene018518.t1 AT1G07710 43.013 551 268 8 56 582 15 543 2.39e-118 362
MS.gene018518.t1 AT1G07710 43.013 551 268 8 56 582 15 543 2.39e-118 362
MS.gene018518.t1 AT1G05640 42.315 527 268 8 65 576 110 615 1.39e-113 352
MS.gene018518.t1 AT2G01680 39.960 498 281 6 94 575 28 523 1.14e-111 344
MS.gene018518.t1 AT5G02620 40.237 507 273 6 56 548 5 495 4.99e-104 324
MS.gene018518.t1 AT5G02620 40.237 507 273 6 56 548 5 495 4.99e-104 324
MS.gene018518.t1 AT5G02620 40.237 507 273 6 56 548 5 495 4.99e-104 324
MS.gene018518.t1 AT5G02620 38.491 530 273 7 56 548 5 518 1.55e-98 310
MS.gene018518.t1 AT5G02620 38.491 530 273 7 56 548 5 518 1.55e-98 310
MS.gene018518.t1 AT1G34050 26.230 488 247 14 162 546 58 535 1.00e-33 135
MS.gene018518.t1 AT1G10340 24.578 533 315 13 68 544 37 538 6.30e-32 130
MS.gene018518.t1 AT1G10340 24.764 529 315 13 68 544 37 534 6.70e-32 130
MS.gene018518.t1 AT2G24600 25.000 548 313 18 68 549 37 552 2.50e-30 126
MS.gene018518.t1 AT2G24600 25.000 548 313 18 68 549 37 552 2.50e-30 126
MS.gene018518.t1 AT4G03500 24.111 506 335 14 69 533 103 600 1.33e-29 124
MS.gene018518.t1 AT4G03500 24.111 506 335 14 69 533 80 577 1.77e-29 123
MS.gene018518.t1 AT4G03500 24.111 506 335 14 69 533 80 577 1.77e-29 123
MS.gene018518.t1 AT5G54710 25.197 508 323 16 103 565 127 622 2.01e-28 120
MS.gene018518.t1 AT5G54710 25.197 508 323 16 103 565 82 577 2.48e-28 120
MS.gene018518.t1 AT1G03670 26.136 440 287 8 125 554 182 593 3.04e-25 110
MS.gene018518.t1 AT5G50140 23.387 496 321 12 122 561 26 518 1.17e-23 105
MS.gene018518.t1 AT4G03490 25.701 428 274 12 127 543 182 576 3.94e-22 101
MS.gene018518.t1 AT4G03490 25.829 422 269 12 127 537 172 560 4.35e-22 100
MS.gene018518.t1 AT4G03490 25.829 422 269 12 127 537 182 570 4.84e-22 100
MS.gene018518.t1 AT4G03470 25.098 510 336 15 42 532 138 620 4.65e-21 97.8
MS.gene018518.t1 AT5G54700 25.067 375 211 9 195 535 4 342 6.19e-21 96.7
MS.gene018518.t1 AT4G03460 24.762 420 271 9 120 525 158 546 2.06e-20 95.5
MS.gene018518.t1 AT4G03460 24.762 420 271 9 120 525 190 578 2.73e-20 95.5
MS.gene018518.t1 AT5G54700 27.469 324 188 10 249 550 20 318 5.15e-20 92.0
MS.gene018518.t1 AT4G14390 23.554 484 331 12 70 528 168 637 2.64e-19 92.4
MS.gene018518.t1 AT3G18670 24.224 483 295 16 123 534 84 566 1.28e-18 90.1
MS.gene018518.t1 AT4G14390 23.602 483 331 12 70 528 149 617 2.07e-18 89.7
MS.gene018518.t1 AT4G14390 27.805 205 132 6 66 268 227 417 1.00e-11 68.2
MS.gene018518.t1 AT4G14390 23.602 483 331 12 70 528 168 636 2.54e-18 89.4
MS.gene018518.t1 AT4G14390 27.805 205 132 6 66 268 246 436 1.01e-11 68.2
MS.gene018518.t1 AT2G03430 35.057 174 108 4 127 298 16 186 3.83e-18 84.7
MS.gene018518.t1 AT4G03490 25.139 541 305 18 60 537 9 512 1.16e-17 87.4
MS.gene018518.t1 AT4G03490 25.046 547 310 18 60 543 19 528 1.43e-17 87.0
MS.gene018518.t1 AT4G03480 25.641 351 227 8 155 474 312 659 1.52e-16 83.6
MS.gene018518.t1 AT4G03480 25.641 351 227 8 155 474 309 656 1.61e-16 83.6
MS.gene018518.t1 AT5G15500 29.557 203 122 5 125 309 40 239 1.87e-16 82.8
MS.gene018518.t1 AT1G14500 24.625 333 177 8 155 467 68 346 1.93e-16 82.4
MS.gene018518.t1 AT5G51160 26.990 289 168 7 155 437 44 295 2.02e-15 79.3
MS.gene018518.t1 AT4G10720 22.727 440 272 15 125 552 39 422 4.45e-15 78.2
MS.gene018518.t1 AT2G24600 23.776 429 242 13 68 442 37 434 6.09e-15 78.2
MS.gene018518.t1 AT2G24600 23.776 429 242 13 68 442 37 434 6.09e-15 78.2
MS.gene018518.t1 AT4G10720 23.714 350 223 9 125 469 39 349 3.84e-14 75.1
MS.gene018518.t1 AT4G03450 25.594 379 233 11 120 480 184 531 6.61e-14 75.1
MS.gene018518.t1 AT4G03450 25.594 379 233 11 120 480 184 531 1.07e-13 74.7
MS.gene018518.t1 AT4G14390 24.619 394 248 10 70 435 149 521 1.57e-13 73.9
MS.gene018518.t1 AT4G14390 27.805 205 132 6 66 268 227 417 2.55e-11 66.6
MS.gene018518.t1 AT4G03440 24.752 404 253 13 162 545 317 689 6.89e-13 72.0
MS.gene018518.t1 AT3G18670 28.169 142 96 1 399 534 480 621 7.59e-13 72.0
MS.gene018518.t1 AT4G03440 24.752 404 253 13 162 545 310 682 8.08e-13 72.0
MS.gene018518.t1 AT4G03440 24.752 404 253 13 162 545 310 682 8.08e-13 72.0
MS.gene018518.t1 AT3G04710 28.906 256 151 9 43 280 30 272 1.25e-12 70.5
MS.gene018518.t1 AT3G04710 28.906 256 151 9 43 280 254 496 1.65e-12 70.9
MS.gene018518.t1 AT2G14255 28.270 237 156 7 125 352 26 257 2.90e-12 69.7
MS.gene018518.t1 AT3G04710 28.516 256 151 9 43 280 30 271 2.92e-11 66.2
MS.gene018518.t1 AT4G19150 32.143 140 92 3 162 301 20 156 7.52e-11 63.2

Find 154 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATATCAGAAGAGATTT+TGG 0.120998 7.4:+9819641 MS.gene018518:CDS
GATATTGTCAATATATTGTT+AGG 0.214361 7.4:+9819145 MS.gene018518:CDS
GACTATTAAATAGCATAAAT+TGG 0.217594 7.4:-9820359 None:intergenic
AGTCCTTCTTTGGTGGTATA+AGG 0.227846 7.4:-9818536 None:intergenic
TCTAGGGGTGGTTGGGGTGT+TGG 0.234547 7.4:-9818144 None:intergenic
GCAATCCTTGTTACTGTTGT+AGG 0.249078 7.4:+9820191 MS.gene018518:CDS
TCCCTCGTCATTTCCAATTC+TGG 0.254175 7.4:+9818224 MS.gene018518:CDS
TCCAAAATCTCTTCTGATAT+TGG 0.257559 7.4:-9819642 None:intergenic
GGGTGGGTCTAGGGGTGGTT+GGG 0.257724 7.4:-9818151 None:intergenic
CCTTGGCTGGTTGAGATCAT+TGG 0.276643 7.4:-9819703 None:intergenic
TACCTCTACCCTCTTCTTCC+TGG 0.277013 7.4:-9819332 None:intergenic
TTTACAAGATAGTCCTTCTT+TGG 0.279483 7.4:-9818546 None:intergenic
ATTGTAATGGGTGGTGTTCT+TGG 0.280140 7.4:+9820218 MS.gene018518:CDS
CTAGGGGTGGTTGGGGTGTT+GGG 0.284653 7.4:-9818143 None:intergenic
GACGAGGCGTTTGCCAGAAT+TGG 0.304324 7.4:-9818237 None:intergenic
GGTGGGTCTAGGGGTGGTTG+GGG 0.319326 7.4:-9818150 None:intergenic
CCTCACTCTTCGGTGACGTT+TGG 0.320261 7.4:-9820267 None:intergenic
CCTGGTGGGGATCATGATAA+TGG 0.324667 7.4:+9819930 MS.gene018518:CDS
TGCCGGAAGTGGAGAGGAAT+AGG 0.343790 7.4:-9818172 None:intergenic
GAGAGGAATAGGGTGGGTCT+AGG 0.344264 7.4:-9818161 None:intergenic
GGTGGTTGGGGTGTTGGGTT+CGG 0.348554 7.4:-9818138 None:intergenic
AGGGTGGGTCTAGGGGTGGT+TGG 0.353657 7.4:-9818152 None:intergenic
ATGCTGAAGTTGCGGATATA+AGG 0.362620 7.4:+9818420 MS.gene018518:CDS
GGAGACAAGAAGGGCTTTGC+CGG 0.364614 7.4:-9818189 None:intergenic
GACGAGGGATTTGTTGGAGT+TGG 0.371967 7.4:-9818210 None:intergenic
CAATCCTTGTTACTGTTGTA+GGG 0.374512 7.4:+9820192 MS.gene018518:CDS
CACTTCATTGGCTGTGGTGG+TGG 0.381287 7.4:+9820019 MS.gene018518:CDS
TCCTCAGCTCGTCCCTTGGC+TGG 0.388294 7.4:-9819716 None:intergenic
GAAAGAGGAGCGTGGCCGGC+GGG 0.390146 7.4:-9818116 None:intergenic
GAGGAATAGGGTGGGTCTAG+GGG 0.395584 7.4:-9818159 None:intergenic
AAGGACTCACTTATTCGTTA+TGG 0.399648 7.4:+9819669 MS.gene018518:CDS
GTCCTTCTTTGGTGGTATAA+GGG 0.400914 7.4:-9818535 None:intergenic
AGAGGAATAGGGTGGGTCTA+GGG 0.406165 7.4:-9818160 None:intergenic
GTTCAAATAACTGTTGTTAG+AGG 0.406250 7.4:+9820041 MS.gene018518:CDS
GTGCAACTTGCGCAGCTCCT+TGG 0.406953 7.4:-9819820 None:intergenic
TCTCTTTCTTCCTCACTCTT+CGG 0.407155 7.4:-9820277 None:intergenic
GCGGTGATGCTGCCGCTGTT+AGG 0.410842 7.4:+9818339 MS.gene018518:CDS
CGCTTCATATGGCGGTCAAA+GGG 0.411725 7.4:+9819215 MS.gene018518:CDS
ATCTTATGATCCTAGTCAAT+TGG 0.414022 7.4:+9819063 MS.gene018518:CDS
AAGTTGCTTCTTGCTGCTGA+TGG 0.419284 7.4:+9819256 MS.gene018518:CDS
GTCATGCTTCCTGACAAGTT+TGG 0.426669 7.4:+9819286 MS.gene018518:CDS
AAAACAAACAAGAATGTGAA+TGG 0.428260 7.4:+9819792 MS.gene018518:CDS
TGCCGCTGTTAGGAATATTC+TGG 0.433235 7.4:+9818349 MS.gene018518:CDS
GGAAATGACGAGGGATTTGT+TGG 0.436881 7.4:-9818216 None:intergenic
AAGAAGGGCTTTGCCGGAAG+TGG 0.440749 7.4:-9818183 None:intergenic
ATGAAGTGCATTCTTTCCAT+TGG 0.445344 7.4:-9819098 None:intergenic
GGAGATAAAGTCTGAGAGAA+GGG 0.447714 7.4:+9820064 MS.gene018518:CDS
TTCGGAAAGAGGAGCGTGGC+CGG 0.449506 7.4:-9818120 None:intergenic
TTCATGGCGTAATTCTGATT+CGG 0.456908 7.4:+9820322 MS.gene018518:CDS
CAAGGAATGGAACACATTCA+TGG 0.458877 7.4:+9820306 MS.gene018518:CDS
GAATAGGGTGGGTCTAGGGG+TGG 0.461324 7.4:-9818156 None:intergenic
AGGGCATTCGCATTGGTGTC+GGG 0.461867 7.4:-9819576 None:intergenic
GCAGTATTGCCAAACTTGTC+AGG 0.463768 7.4:-9819295 None:intergenic
ACTTCATTTATCTGCACGCC+AGG 0.464249 7.4:+9819114 MS.gene018518:CDS
GCAGCATCTTATATAGTAGT+TGG 0.467155 7.4:+9820149 MS.gene018518:CDS
CTGGTGGGGATCATGATAAT+GGG 0.468589 7.4:+9819931 MS.gene018518:CDS
GCAAATGTCTTGATTAGCTC+TGG 0.471908 7.4:-9818971 None:intergenic
ATCTTTCTTAATCTGAGTCA+TGG 0.474155 7.4:-9819742 None:intergenic
AGGACAAACGCCGCTTCATA+TGG 0.478041 7.4:+9819204 MS.gene018518:CDS
ACCCTATTCCTCTCCACTTC+CGG 0.480160 7.4:+9818170 MS.gene018518:CDS
GAGGGCATTCGCATTGGTGT+CGG 0.481466 7.4:-9819577 None:intergenic
ACAAGATAGTCCTTCTTTGG+TGG 0.484767 7.4:-9818543 None:intergenic
GGGGTGTTGGGTTCGGAAAG+AGG 0.490833 7.4:-9818131 None:intergenic
CTGCGCAAGTTGCACAGAGC+AGG 0.494791 7.4:+9819828 MS.gene018518:CDS
GGGAGATAAAGTCTGAGAGA+AGG 0.495604 7.4:+9820063 MS.gene018518:CDS
TCTTGTGAGGGCATTCGCAT+TGG 0.498367 7.4:-9819583 None:intergenic
GCCGGAAGTGGAGAGGAATA+GGG 0.499698 7.4:-9818171 None:intergenic
CCGCTTCATATGGCGGTCAA+AGG 0.504074 7.4:+9819214 MS.gene018518:CDS
TTCAAATAACTGTTGTTAGA+GGG 0.504770 7.4:+9820042 MS.gene018518:CDS
AATAGCATTAGAGATGAAAA+AGG 0.505791 7.4:-9819988 None:intergenic
TTTCACTTCATTGGCTGTGG+TGG 0.508039 7.4:+9820016 MS.gene018518:CDS
TCTTGATTAGCTCTGGATCA+TGG 0.513054 7.4:-9818964 None:intergenic
CTCCCTTATACCACCAAAGA+AGG 0.513242 7.4:+9818533 MS.gene018518:CDS
TAGTTGGTCGACGCAGCCTG+TGG 0.515142 7.4:+9820165 MS.gene018518:CDS
ATCCTTGTTACTGTTGTAGG+GGG 0.516823 7.4:+9820194 MS.gene018518:CDS
TGAGATTGATGATCAAATGA+TGG 0.517261 7.4:+9818373 MS.gene018518:CDS
TGTTGGAGTTGGAGACAAGA+AGG 0.518725 7.4:-9818199 None:intergenic
GGAAAGAGGAGCGTGGCCGG+CGG 0.518995 7.4:-9818117 None:intergenic
AAACAAACAAGAATGTGAAT+GGG 0.523203 7.4:+9819793 MS.gene018518:CDS
TGTTAACGAAGTTAATGACT+TGG 0.523723 7.4:+9818451 MS.gene018518:CDS
TGCGGCTACAAGAGGGCATA+CGG 0.525316 7.4:+9819021 MS.gene018518:CDS
CTAGCTATCTCCAATTGACT+AGG 0.532153 7.4:-9819073 None:intergenic
AAAGAGGAGCGTGGCCGGCG+GGG 0.535243 7.4:-9818115 None:intergenic
GTTAACGAAGTTAATGACTT+GGG 0.535760 7.4:+9818452 MS.gene018518:CDS
GGAAGAAAGAGAAGATCTCA+AGG 0.537556 7.4:+9820288 MS.gene018518:CDS
TTGCATATTGCAGCAAATCA+AGG 0.538026 7.4:+9818590 MS.gene018518:CDS
CTCGGTGTCATTATGACGAC+CGG 0.538570 7.4:-9818297 None:intergenic
GGTTTCTGTGCTATTTGCAA+CGG 0.540421 7.4:+9819881 MS.gene018518:CDS
ATATTGTCAATATATTGTTA+GGG 0.541111 7.4:+9819146 MS.gene018518:CDS
AAAGAGAAGATCTCAAGGAA+TGG 0.541144 7.4:+9820293 MS.gene018518:CDS
CAGTCCTTCGAGCAAGCTGC+GGG 0.546468 7.4:-9819174 None:intergenic
CCAATGATCTCAACCAGCCA+AGG 0.546813 7.4:+9819703 MS.gene018518:CDS
TGTCAATATATTGTTAGGGA+AGG 0.552145 7.4:+9819150 MS.gene018518:CDS
CTTGTATCTGCGGCTACAAG+AGG 0.552318 7.4:+9819013 MS.gene018518:CDS
CCATTATCATGATCCCCACC+AGG 0.552472 7.4:-9819930 None:intergenic
GTCATTAACTTCGTTAACAA+TGG 0.552902 7.4:-9818447 None:intergenic
TTGGAGATAGCTAGATCCAA+TGG 0.558617 7.4:+9819082 MS.gene018518:CDS
TCAGTCCTTCGAGCAAGCTG+CGG 0.564899 7.4:-9819175 None:intergenic
CTCTACCCTCTTCTTCCTGG+TGG 0.567336 7.4:-9819329 None:intergenic
TGCTACCAACTCTGTAACTG+TGG 0.569261 7.4:+9819860 MS.gene018518:CDS
TTGCGCAGCAAGATGAAGCT+CGG 0.573480 7.4:-9818315 None:intergenic
GTTGGAGTTGGAGACAAGAA+GGG 0.573938 7.4:-9818198 None:intergenic
CTGCATTGCATGTAGCCACC+AGG 0.574200 7.4:+9819314 MS.gene018518:CDS
ACCAGCCAAGGGACGAGCTG+AGG 0.575224 7.4:+9819715 MS.gene018518:CDS
CACCAGGAAGAAGAGGGTAG+AGG 0.576801 7.4:+9819330 MS.gene018518:CDS
TGCAACTCCTCTTGTATCTG+CGG 0.578451 7.4:+9819003 MS.gene018518:CDS
AATCCTTGTTACTGTTGTAG+GGG 0.579425 7.4:+9820193 MS.gene018518:CDS
CTTCATCTTGCTGCGCAACG+CGG 0.580064 7.4:+9818320 MS.gene018518:CDS
TCAAATAACTGTTGTTAGAG+GGG 0.580153 7.4:+9820043 MS.gene018518:CDS
AGGACCCGCAGCTTGCTCGA+AGG 0.582573 7.4:+9819170 MS.gene018518:CDS
CCATTCATGGATCACCCCGC+CGG 0.583675 7.4:+9818101 None:intergenic
TGATTTGCTGCAATATGCAA+TGG 0.587424 7.4:-9818587 None:intergenic
TGTAGCCACCAGGAAGAAGA+GGG 0.588374 7.4:+9819324 MS.gene018518:CDS
TCCTTGTTACTGTTGTAGGG+GGG 0.588655 7.4:+9820195 MS.gene018518:CDS
TGACAATATCAACATATCCC+TGG 0.589135 7.4:-9819132 None:intergenic
TAACAAGGATTGCAGCCCAC+AGG 0.594685 7.4:-9820181 None:intergenic
GAGATTGATGATCAAATGAT+GGG 0.600031 7.4:+9818374 MS.gene018518:CDS
AGTTGGTCGACGCAGCCTGT+GGG 0.602868 7.4:+9820166 MS.gene018518:CDS
GCTCGAAGGACTGATAAGAA+AGG 0.603769 7.4:+9819184 MS.gene018518:CDS
ATGTAGCCACCAGGAAGAAG+AGG 0.605868 7.4:+9819323 MS.gene018518:CDS
AGTGCTTCCGCAAGGTCAAG+AGG 0.607646 7.4:-9819618 None:intergenic
TGATAATGGGATGGCTGTGA+TGG 0.612051 7.4:+9819944 MS.gene018518:CDS
TGCCAGAATTGGAAATGACG+AGG 0.612477 7.4:-9818226 None:intergenic
GTCTGAGAGAAGGGTTACAG+AGG 0.613101 7.4:+9820073 MS.gene018518:CDS
GCCAGAATTGGAAATGACGA+GGG 0.613573 7.4:-9818225 None:intergenic
TGGGGATCATGATAATGGGA+TGG 0.614869 7.4:+9819935 MS.gene018518:CDS
CTTCATTTATCTGCACGCCA+GGG 0.616151 7.4:+9819115 MS.gene018518:CDS
AGGTGATCAATAAGATGATG+TGG 0.618952 7.4:+9820093 MS.gene018518:CDS
AAATATGTAAAACAGGTCAC+CGG 0.619209 7.4:+9818278 MS.gene018518:CDS
TTGTATCTGCGGCTACAAGA+GGG 0.620058 7.4:+9819014 MS.gene018518:CDS
CCTTTGACCGCCATATGAAG+CGG 0.622609 7.4:-9819214 None:intergenic
CTTGTAGCCGCAGATACAAG+AGG 0.624185 7.4:-9819010 None:intergenic
CAAAGGGGTTAACTGTGAAG+TGG 0.630420 7.4:+9819231 MS.gene018518:CDS
AGAAACCACAGTTACAGAGT+TGG 0.633035 7.4:-9819865 None:intergenic
GAATGTGAATGGGATTGCCA+AGG 0.633102 7.4:+9819803 MS.gene018518:CDS
GGGCTTTGCCGGAAGTGGAG+AGG 0.635402 7.4:-9818178 None:intergenic
CAATGATCTCAACCAGCCAA+GGG 0.638090 7.4:+9819704 MS.gene018518:CDS
TCTTGCTGGGTGTCTCGACG+AGG 0.640598 7.4:-9818253 None:intergenic
CCAAACGTCACCGAAGAGTG+AGG 0.649993 7.4:+9820267 MS.gene018518:CDS
CAAAACACCTCTTGACCTTG+CGG 0.650691 7.4:+9819611 MS.gene018518:CDS
GGAAGTGGAGAGGAATAGGG+TGG 0.652742 7.4:-9818168 None:intergenic
ATATTGGAAGTGCTTCCGCA+AGG 0.654649 7.4:-9819626 None:intergenic
AGCCAGAATATTCCTAACAG+CGG 0.659039 7.4:-9818351 None:intergenic
ACAAACGCCGCTTCATATGG+CGG 0.659247 7.4:+9819207 MS.gene018518:CDS
AAAACGACCTTTCTCAGCTG+CGG 0.663709 7.4:-9818492 None:intergenic
GCAGCAAATCAAGGTCACAA+AGG 0.668138 7.4:+9818599 MS.gene018518:CDS
GCTTCATATGGCGGTCAAAG+GGG 0.676524 7.4:+9819216 MS.gene018518:CDS
TGGGTTCGGAAAGAGGAGCG+TGG 0.686370 7.4:-9818124 None:intergenic
CAAATGATGGGAACGCTCAG+TGG 0.691348 7.4:+9818386 MS.gene018518:CDS
CATTATCATGATCCCCACCA+GGG 0.695526 7.4:-9819929 None:intergenic
TGCTGCAACAAATGAAACTG+AGG 0.698675 7.4:-9820132 None:intergenic
GAAGTGGAGAGGAATAGGGT+GGG 0.699796 7.4:-9818167 None:intergenic
TGAGTTTGATGCTGAAGTTG+CGG 0.701626 7.4:+9818412 MS.gene018518:CDS
GCAATGGATCAAAACCAGAG+CGG 0.786525 7.4:-9818571 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTTTATAGAAAAAAAATTG+TGG + chr7.4:9818684-9818703 MS.gene018518:intron 15.0%
!! ATATTGTCAATATATTGTTA+GGG + chr7.4:9819146-9819165 MS.gene018518:CDS 15.0%
!! TGTTATATTACTCAAAATAA+AGG - chr7.4:9819473-9819492 None:intergenic 15.0%
!! CAAGAAAAAATATGTAAAAC+AGG + chr7.4:9818271-9818290 MS.gene018518:CDS 20.0%
!! GATATTGTCAATATATTGTT+AGG + chr7.4:9819145-9819164 MS.gene018518:CDS 20.0%
!! GTTATATATATTGTTGTGAA+TGG + chr7.4:9818913-9818932 MS.gene018518:intron 20.0%
!!! TTTACATATTTTTTCTTGCT+GGG - chr7.4:9818269-9818288 None:intergenic 20.0%
!!! TTTTACATATTTTTTCTTGC+TGG - chr7.4:9818270-9818289 None:intergenic 20.0%
! AAAACAAACAAGAATGTGAA+TGG + chr7.4:9819792-9819811 MS.gene018518:CDS 25.0%
! AAACAAACAAGAATGTGAAT+GGG + chr7.4:9819793-9819812 MS.gene018518:CDS 25.0%
! AATAGCATTAGAGATGAAAA+AGG - chr7.4:9819991-9820010 None:intergenic 25.0%
! ATATATATTGTTGTGAATGG+TGG + chr7.4:9818916-9818935 MS.gene018518:intron 25.0%
! TTCAAATAACTGTTGTTAGA+GGG + chr7.4:9820042-9820061 MS.gene018518:CDS 25.0%
AAAATCATAACCTGACTGTT+TGG - chr7.4:9818860-9818879 None:intergenic 30.0%
AAATATGTAAAACAGGTCAC+CGG + chr7.4:9818278-9818297 MS.gene018518:CDS 30.0%
ATCTTATGATCCTAGTCAAT+TGG + chr7.4:9819063-9819082 MS.gene018518:CDS 30.0%
ATCTTTCTTAATCTGAGTCA+TGG - chr7.4:9819745-9819764 None:intergenic 30.0%
CTTATTTCCATAAGCTCTTT+AGG + chr7.4:9818729-9818748 MS.gene018518:intron 30.0%
GTCATTAACTTCGTTAACAA+TGG - chr7.4:9818450-9818469 None:intergenic 30.0%
GTTAACGAAGTTAATGACTT+GGG + chr7.4:9818452-9818471 MS.gene018518:CDS 30.0%
GTTCAAATAACTGTTGTTAG+AGG + chr7.4:9820041-9820060 MS.gene018518:CDS 30.0%
TCAAATAACTGTTGTTAGAG+GGG + chr7.4:9820043-9820062 MS.gene018518:CDS 30.0%
TCCAAAATCTCTTCTGATAT+TGG - chr7.4:9819645-9819664 None:intergenic 30.0%
TGTCAATATATTGTTAGGGA+AGG + chr7.4:9819150-9819169 MS.gene018518:CDS 30.0%
TGTTAACGAAGTTAATGACT+TGG + chr7.4:9818451-9818470 MS.gene018518:CDS 30.0%
TTTACAAGATAGTCCTTCTT+TGG - chr7.4:9818549-9818568 None:intergenic 30.0%
! GAGATTGATGATCAAATGAT+GGG + chr7.4:9818374-9818393 MS.gene018518:CDS 30.0%
! TATTGCACTTTTCACTTCAT+TGG + chr7.4:9820007-9820026 MS.gene018518:CDS 30.0%
! TCCAATATCAGAAGAGATTT+TGG + chr7.4:9819641-9819660 MS.gene018518:CDS 30.0%
! TCTTCAATGAGTATTGTCAT+AGG + chr7.4:9818640-9818659 MS.gene018518:intron 30.0%
! TGAGATTGATGATCAAATGA+TGG + chr7.4:9818373-9818392 MS.gene018518:CDS 30.0%
AAAGAGAAGATCTCAAGGAA+TGG + chr7.4:9820293-9820312 MS.gene018518:CDS 35.0%
AAGGACTCACTTATTCGTTA+TGG + chr7.4:9819669-9819688 MS.gene018518:CDS 35.0%
AATCCTTGTTACTGTTGTAG+GGG + chr7.4:9820193-9820212 MS.gene018518:CDS 35.0%
AGGTGATCAATAAGATGATG+TGG + chr7.4:9820093-9820112 MS.gene018518:CDS 35.0%
ATGAAGTGCATTCTTTCCAT+TGG - chr7.4:9819101-9819120 None:intergenic 35.0%
CAATCCTTGTTACTGTTGTA+GGG + chr7.4:9820192-9820211 MS.gene018518:CDS 35.0%
GCAGCATCTTATATAGTAGT+TGG + chr7.4:9820149-9820168 MS.gene018518:CDS 35.0%
TAGCTATCCTAAAGAGCTTA+TGG - chr7.4:9818739-9818758 None:intergenic 35.0%
TGACAATATCAACATATCCC+TGG - chr7.4:9819135-9819154 None:intergenic 35.0%
TTCATGGCGTAATTCTGATT+CGG + chr7.4:9820322-9820341 MS.gene018518:CDS 35.0%
TTGCATATTGCAGCAAATCA+AGG + chr7.4:9818590-9818609 MS.gene018518:CDS 35.0%
! ACGTTTTTATCCAAACAGTC+AGG + chr7.4:9818847-9818866 MS.gene018518:intron 35.0%
!! AGAAGAGATTTTGGAGATCA+AGG + chr7.4:9819650-9819669 MS.gene018518:CDS 35.0%
!! TGATTTGCTGCAATATGCAA+TGG - chr7.4:9818590-9818609 None:intergenic 35.0%
ACAAGATAGTCCTTCTTTGG+TGG - chr7.4:9818546-9818565 None:intergenic 40.0%
AGAAACCACAGTTACAGAGT+TGG - chr7.4:9819868-9819887 None:intergenic 40.0%
AGCCAGAATATTCCTAACAG+CGG - chr7.4:9818354-9818373 None:intergenic 40.0%
AGTGTAACTGCAAAACCATG+TGG + chr7.4:9819400-9819419 MS.gene018518:intron 40.0%
ATCCTTGTTACTGTTGTAGG+GGG + chr7.4:9820194-9820213 MS.gene018518:CDS 40.0%
ATGCTGAAGTTGCGGATATA+AGG + chr7.4:9818420-9818439 MS.gene018518:CDS 40.0%
CAAGGAATGGAACACATTCA+TGG + chr7.4:9820306-9820325 MS.gene018518:CDS 40.0%
CTAGCTATCTCCAATTGACT+AGG - chr7.4:9819076-9819095 None:intergenic 40.0%
CTATCTTGTAAAAACCGCTC+TGG + chr7.4:9818557-9818576 MS.gene018518:CDS 40.0%
GCAATCCTTGTTACTGTTGT+AGG + chr7.4:9820191-9820210 MS.gene018518:CDS 40.0%
GGAAGAAAGAGAAGATCTCA+AGG + chr7.4:9820288-9820307 MS.gene018518:CDS 40.0%
GGAGATAAAGTCTGAGAGAA+GGG + chr7.4:9820064-9820083 MS.gene018518:CDS 40.0%
TATAACTAGCGAACTCCACA+TGG - chr7.4:9819418-9819437 None:intergenic 40.0%
TCTCTTTCTTCCTCACTCTT+CGG - chr7.4:9820280-9820299 None:intergenic 40.0%
TGAGTTTGATGCTGAAGTTG+CGG + chr7.4:9818412-9818431 MS.gene018518:CDS 40.0%
TGCTGCAACAAATGAAACTG+AGG - chr7.4:9820135-9820154 None:intergenic 40.0%
TTGGAGATAGCTAGATCCAA+TGG + chr7.4:9819082-9819101 MS.gene018518:CDS 40.0%
! AGTCCTTCTTTGGTGGTATA+AGG - chr7.4:9818539-9818558 None:intergenic 40.0%
! GCAAATGTCTTGATTAGCTC+TGG - chr7.4:9818974-9818993 None:intergenic 40.0%
! GTCCTTCTTTGGTGGTATAA+GGG - chr7.4:9818538-9818557 None:intergenic 40.0%
! TGTTTTGTGGTCTCTTGTGA+GGG - chr7.4:9819598-9819617 None:intergenic 40.0%
!! ACTTTTCACTTCATTGGCTG+TGG + chr7.4:9820013-9820032 MS.gene018518:CDS 40.0%
!! ATTGTAATGGGTGGTGTTCT+TGG + chr7.4:9820218-9820237 MS.gene018518:CDS 40.0%
!! GGTTTCTGTGCTATTTGCAA+CGG + chr7.4:9819881-9819900 MS.gene018518:CDS 40.0%
!! TCTTGATTAGCTCTGGATCA+TGG - chr7.4:9818967-9818986 None:intergenic 40.0%
AAAACGACCTTTCTCAGCTG+CGG - chr7.4:9818495-9818514 None:intergenic 45.0%
AAGTTGCTTCTTGCTGCTGA+TGG + chr7.4:9819256-9819275 MS.gene018518:CDS 45.0%
ACTTCATTTATCTGCACGCC+AGG + chr7.4:9819114-9819133 MS.gene018518:CDS 45.0%
CAAAACACCTCTTGACCTTG+CGG + chr7.4:9819611-9819630 MS.gene018518:CDS 45.0%
CAAAGGGGTTAACTGTGAAG+TGG + chr7.4:9819231-9819250 MS.gene018518:CDS 45.0%
CAATGATCTCAACCAGCCAA+GGG + chr7.4:9819704-9819723 MS.gene018518:CDS 45.0%
CATTATCATGATCCCCACCA+GGG - chr7.4:9819932-9819951 None:intergenic 45.0%
CTCCCTTATACCACCAAAGA+AGG + chr7.4:9818533-9818552 MS.gene018518:CDS 45.0%
CTGGTGGGGATCATGATAAT+GGG + chr7.4:9819931-9819950 MS.gene018518:CDS 45.0%
CTTCATTTATCTGCACGCCA+GGG + chr7.4:9819115-9819134 MS.gene018518:CDS 45.0%
GAATGTGAATGGGATTGCCA+AGG + chr7.4:9819803-9819822 MS.gene018518:CDS 45.0%
GCAATGGATCAAAACCAGAG+CGG - chr7.4:9818574-9818593 None:intergenic 45.0%
GCAGCAAATCAAGGTCACAA+AGG + chr7.4:9818599-9818618 MS.gene018518:CDS 45.0%
GCAGTATTGCCAAACTTGTC+AGG - chr7.4:9819298-9819317 None:intergenic 45.0%
GCCAGAATTGGAAATGACGA+GGG - chr7.4:9818228-9818247 None:intergenic 45.0%
GCTCGAAGGACTGATAAGAA+AGG + chr7.4:9819184-9819203 MS.gene018518:CDS 45.0%
GGAAATGACGAGGGATTTGT+TGG - chr7.4:9818219-9818238 None:intergenic 45.0%
GGGAGATAAAGTCTGAGAGA+AGG + chr7.4:9820063-9820082 MS.gene018518:CDS 45.0%
GTCATGCTTCCTGACAAGTT+TGG + chr7.4:9819286-9819305 MS.gene018518:CDS 45.0%
GTTGGAGTTGGAGACAAGAA+GGG - chr7.4:9818201-9818220 None:intergenic 45.0%
GTTGTAGGGGGGATTGTAAT+GGG + chr7.4:9820206-9820225 MS.gene018518:CDS 45.0%
TCCCTCGTCATTTCCAATTC+TGG + chr7.4:9818224-9818243 MS.gene018518:CDS 45.0%
TCCTTGTTACTGTTGTAGGG+GGG + chr7.4:9820195-9820214 MS.gene018518:CDS 45.0%
TGCAACTCCTCTTGTATCTG+CGG + chr7.4:9819003-9819022 MS.gene018518:CDS 45.0%
TGCCAGAATTGGAAATGACG+AGG - chr7.4:9818229-9818248 None:intergenic 45.0%
TGCCGCTGTTAGGAATATTC+TGG + chr7.4:9818349-9818368 MS.gene018518:CDS 45.0%
TGCTACCAACTCTGTAACTG+TGG + chr7.4:9819860-9819879 MS.gene018518:CDS 45.0%
TGTTGGAGTTGGAGACAAGA+AGG - chr7.4:9818202-9818221 None:intergenic 45.0%
TGTTGTAGGGGGGATTGTAA+TGG + chr7.4:9820205-9820224 MS.gene018518:CDS 45.0%
TTGTATCTGCGGCTACAAGA+GGG + chr7.4:9819014-9819033 MS.gene018518:CDS 45.0%
! CTTTTTACCGCAGCTGAGAA+AGG + chr7.4:9818485-9818504 MS.gene018518:CDS 45.0%
! GTGTTTTGTGGTCTCTTGTG+AGG - chr7.4:9819599-9819618 None:intergenic 45.0%
! TTTCACTTCATTGGCTGTGG+TGG + chr7.4:9820016-9820035 MS.gene018518:CDS 45.0%
!! ATATTGGAAGTGCTTCCGCA+AGG - chr7.4:9819629-9819648 None:intergenic 45.0%
!! TGATAATGGGATGGCTGTGA+TGG + chr7.4:9819944-9819963 MS.gene018518:CDS 45.0%
!! TGGGGATCATGATAATGGGA+TGG + chr7.4:9819935-9819954 MS.gene018518:CDS 45.0%
!!! CAAGGTCAAGAGGTGTTTTG+TGG - chr7.4:9819611-9819630 None:intergenic 45.0%
ACAAACGCCGCTTCATATGG+CGG + chr7.4:9819207-9819226 MS.gene018518:CDS 50.0%
ACCCTATTCCTCTCCACTTC+CGG + chr7.4:9818170-9818189 MS.gene018518:CDS 50.0%
AGAGGAATAGGGTGGGTCTA+GGG - chr7.4:9818163-9818182 None:intergenic 50.0%
AGGACAAACGCCGCTTCATA+TGG + chr7.4:9819204-9819223 MS.gene018518:CDS 50.0%
ATGTAGCCACCAGGAAGAAG+AGG + chr7.4:9819323-9819342 MS.gene018518:CDS 50.0%
CCAATGATCTCAACCAGCCA+AGG + chr7.4:9819703-9819722 MS.gene018518:CDS 50.0%
CCATTATCATGATCCCCACC+AGG - chr7.4:9819933-9819952 None:intergenic 50.0%
CCTGGTGGGGATCATGATAA+TGG + chr7.4:9819930-9819949 MS.gene018518:CDS 50.0%
CCTTTGACCGCCATATGAAG+CGG - chr7.4:9819217-9819236 None:intergenic 50.0%
CGCTTCATATGGCGGTCAAA+GGG + chr7.4:9819215-9819234 MS.gene018518:CDS 50.0%
CTCAGCTGCGGTAAAAAGTG+CGG - chr7.4:9818483-9818502 None:intergenic 50.0%
CTTGTAGCCGCAGATACAAG+AGG - chr7.4:9819013-9819032 None:intergenic 50.0%
CTTGTATCTGCGGCTACAAG+AGG + chr7.4:9819013-9819032 MS.gene018518:CDS 50.0%
GAAGTGGAGAGGAATAGGGT+GGG - chr7.4:9818170-9818189 None:intergenic 50.0%
GCTTCATATGGCGGTCAAAG+GGG + chr7.4:9819216-9819235 MS.gene018518:CDS 50.0%
GTCTGAGAGAAGGGTTACAG+AGG + chr7.4:9820073-9820092 MS.gene018518:CDS 50.0%
TAACAAGGATTGCAGCCCAC+AGG - chr7.4:9820184-9820203 None:intergenic 50.0%
TACCTCTACCCTCTTCTTCC+TGG - chr7.4:9819335-9819354 None:intergenic 50.0%
TCCCCCCTACAACAGTAACA+AGG - chr7.4:9820199-9820218 None:intergenic 50.0%
TGTAGCCACCAGGAAGAAGA+GGG + chr7.4:9819324-9819343 MS.gene018518:CDS 50.0%
TTGCGCAGCAAGATGAAGCT+CGG - chr7.4:9818318-9818337 None:intergenic 50.0%
! ACTTTTCACAGTCCCTGGTG+GGG + chr7.4:9819917-9819936 MS.gene018518:CDS 50.0%
! CAAATGATGGGAACGCTCAG+TGG + chr7.4:9818386-9818405 MS.gene018518:CDS 50.0%
! CACTTTTCACAGTCCCTGGT+GGG + chr7.4:9819916-9819935 MS.gene018518:CDS 50.0%
! CCTTGGCTGGTTGAGATCAT+TGG - chr7.4:9819706-9819725 None:intergenic 50.0%
!! CTCGGTGTCATTATGACGAC+CGG - chr7.4:9818300-9818319 None:intergenic 50.0%
!! GACGAGGGATTTGTTGGAGT+TGG - chr7.4:9818213-9818232 None:intergenic 50.0%
!! TCTTGTGAGGGCATTCGCAT+TGG - chr7.4:9819586-9819605 None:intergenic 50.0%
AAGAAGGGCTTTGCCGGAAG+TGG - chr7.4:9818186-9818205 None:intergenic 55.0%
AGTGCTTCCGCAAGGTCAAG+AGG - chr7.4:9819621-9819640 None:intergenic 55.0%
CACCAGGAAGAAGAGGGTAG+AGG + chr7.4:9819330-9819349 MS.gene018518:CDS 55.0%
CCAAACGTCACCGAAGAGTG+AGG + chr7.4:9820267-9820286 MS.gene018518:CDS 55.0%
CCGCTTCATATGGCGGTCAA+AGG + chr7.4:9819214-9819233 MS.gene018518:CDS 55.0%
CCTCACTCTTCGGTGACGTT+TGG - chr7.4:9820270-9820289 None:intergenic 55.0%
CTCTACCCTCTTCTTCCTGG+TGG - chr7.4:9819332-9819351 None:intergenic 55.0%
CTGCATTGCATGTAGCCACC+AGG + chr7.4:9819314-9819333 MS.gene018518:CDS 55.0%
CTTCATCTTGCTGCGCAACG+CGG + chr7.4:9818320-9818339 MS.gene018518:CDS 55.0%
GAGAGGAATAGGGTGGGTCT+AGG - chr7.4:9818164-9818183 None:intergenic 55.0%
GAGGAATAGGGTGGGTCTAG+GGG - chr7.4:9818162-9818181 None:intergenic 55.0%
GCCGGAAGTGGAGAGGAATA+GGG - chr7.4:9818174-9818193 None:intergenic 55.0%
GGAAGTGGAGAGGAATAGGG+TGG - chr7.4:9818171-9818190 None:intergenic 55.0%
GGAGACAAGAAGGGCTTTGC+CGG - chr7.4:9818192-9818211 None:intergenic 55.0%
TCAGTCCTTCGAGCAAGCTG+CGG - chr7.4:9819178-9819197 None:intergenic 55.0%
TGCCGGAAGTGGAGAGGAAT+AGG - chr7.4:9818175-9818194 None:intergenic 55.0%
! AGGGCATTCGCATTGGTGTC+GGG - chr7.4:9819579-9819598 None:intergenic 55.0%
! CACTTCATTGGCTGTGGTGG+TGG + chr7.4:9820019-9820038 MS.gene018518:CDS 55.0%
! GACGAGGCGTTTGCCAGAAT+TGG - chr7.4:9818240-9818259 None:intergenic 55.0%
! GCACTTTTCACAGTCCCTGG+TGG + chr7.4:9819915-9819934 MS.gene018518:CDS 55.0%
! GCAGCACTTTTCACAGTCCC+TGG + chr7.4:9819912-9819931 MS.gene018518:CDS 55.0%
! GTAGGGGGGATTGTAATGGG+TGG + chr7.4:9820209-9820228 MS.gene018518:CDS 55.0%
! GTTTTCCTCAGCTCGTCCCT+TGG - chr7.4:9819723-9819742 None:intergenic 55.0%
! TGCGGCTACAAGAGGGCATA+CGG + chr7.4:9819021-9819040 MS.gene018518:CDS 55.0%
!! GAGGGCATTCGCATTGGTGT+CGG - chr7.4:9819580-9819599 None:intergenic 55.0%
AGTTGGTCGACGCAGCCTGT+GGG + chr7.4:9820166-9820185 MS.gene018518:CDS 60.0%
CAGTCCTTCGAGCAAGCTGC+GGG - chr7.4:9819177-9819196 None:intergenic 60.0%
CTGCGCAAGTTGCACAGAGC+AGG + chr7.4:9819828-9819847 MS.gene018518:CDS 60.0%
GAATAGGGTGGGTCTAGGGG+TGG - chr7.4:9818159-9818178 None:intergenic 60.0%
GTGCAACTTGCGCAGCTCCT+TGG - chr7.4:9819823-9819842 None:intergenic 60.0%
TAGTTGGTCGACGCAGCCTG+TGG + chr7.4:9820165-9820184 MS.gene018518:CDS 60.0%
TCTAGGGGTGGTTGGGGTGT+TGG - chr7.4:9818147-9818166 None:intergenic 60.0%
TCTTGCTGGGTGTCTCGACG+AGG - chr7.4:9818256-9818275 None:intergenic 60.0%
TGGGTTCGGAAAGAGGAGCG+TGG - chr7.4:9818127-9818146 None:intergenic 60.0%
! CTAGGGGTGGTTGGGGTGTT+GGG - chr7.4:9818146-9818165 None:intergenic 60.0%
! TTCGGAAAGAGGAGCGTGGC+CGG - chr7.4:9818123-9818142 None:intergenic 60.0%
!! GGGGTGTTGGGTTCGGAAAG+AGG - chr7.4:9818134-9818153 None:intergenic 60.0%
!! GGTGGTTGGGGTGTTGGGTT+CGG - chr7.4:9818141-9818160 None:intergenic 60.0%
ACCAGCCAAGGGACGAGCTG+AGG + chr7.4:9819715-9819734 MS.gene018518:CDS 65.0%
AGGGTGGGTCTAGGGGTGGT+TGG - chr7.4:9818155-9818174 None:intergenic 65.0%
GCGGTGATGCTGCCGCTGTT+AGG + chr7.4:9818339-9818358 MS.gene018518:CDS 65.0%
GGGCTTTGCCGGAAGTGGAG+AGG - chr7.4:9818181-9818200 None:intergenic 65.0%
GGGTGGGTCTAGGGGTGGTT+GGG - chr7.4:9818154-9818173 None:intergenic 65.0%
GGTGGGTCTAGGGGTGGTTG+GGG - chr7.4:9818153-9818172 None:intergenic 65.0%
TCCTCAGCTCGTCCCTTGGC+TGG - chr7.4:9819719-9819738 None:intergenic 65.0%
! AGGACCCGCAGCTTGCTCGA+AGG + chr7.4:9819170-9819189 MS.gene018518:CDS 65.0%
! AAAGAGGAGCGTGGCCGGCG+GGG - chr7.4:9818118-9818137 None:intergenic 70.0%
! GAAAGAGGAGCGTGGCCGGC+GGG - chr7.4:9818119-9818138 None:intergenic 70.0%
! GGAAAGAGGAGCGTGGCCGG+CGG - chr7.4:9818120-9818139 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 9818107 9820376 9818107 ID=MS.gene018518
chr7.4 mRNA 9818107 9820376 9818107 ID=MS.gene018518.t1;Parent=MS.gene018518
chr7.4 exon 9818107 9818620 9818107 ID=MS.gene018518.t1.exon1;Parent=MS.gene018518.t1
chr7.4 CDS 9818107 9818620 9818107 ID=cds.MS.gene018518.t1;Parent=MS.gene018518.t1
chr7.4 exon 9818942 9819351 9818942 ID=MS.gene018518.t1.exon2;Parent=MS.gene018518.t1
chr7.4 CDS 9818942 9819351 9818942 ID=cds.MS.gene018518.t1;Parent=MS.gene018518.t1
chr7.4 exon 9819552 9820376 9819552 ID=MS.gene018518.t1.exon3;Parent=MS.gene018518.t1
chr7.4 CDS 9819552 9820376 9819552 ID=cds.MS.gene018518.t1;Parent=MS.gene018518.t1
Gene Sequence

>MS.gene018518

ATGGATCACCCCGCCGGCCACGCTCCTCTTTCCGAACCCAACACCCCAACCACCCCTAGACCCACCCTATTCCTCTCCACTTCCGGCAAAGCCCTTCTTGTCTCCAACTCCAACAAATCCCTCGTCATTTCCAATTCTGGCAAACGCCTCGTCGAGACACCCAGCAAGAAAAAATATGTAAAACAGGTCACCGGTCGTCATAATGACACCGAGCTTCATCTTGCTGCGCAACGCGGTGATGCTGCCGCTGTTAGGAATATTCTGGCTGAGATTGATGATCAAATGATGGGAACGCTCAGTGGTGCTGAGTTTGATGCTGAAGTTGCGGATATAAGGTCTGCCATTGTTAACGAAGTTAATGACTTGGGTGAAACCGCACTTTTTACCGCAGCTGAGAAAGGTCGTTTTGATGTTGTTAAAGAGCTTCTCCCTTATACCACCAAAGAAGGACTATCTTGTAAAAACCGCTCTGGTTTTGATCCATTGCATATTGCAGCAAATCAAGGTCACAAAGGTATAATATCAGACACATTTCTTCAATGAGTATTGTCATAGGCACTTGTTAGATATTTGTGATAGTTTATAGAAAAAAAATTGTGGCATGTCTATAAGCTGTTTTTAGCTTATTTCCATAAGCTCTTTAGGATAGCTAATGAAAACAACTTATAACATATATGAAAACAATTGTTAGAGAAATAACTTGTACATAAGCACTTTTATTATTAGTGTTTATGCTAGAAACGTTTTTATCCAAACAGTCAGGTTATGATTTTGATATTGATTATTAGTTGTTCTTTGTAGACACTGTTATATATATTGTTGTGAATGGTGGCAGAGATTGTGCAGTTGCTGCTAGACCATGATCCAGAGCTAATCAAGACATTTGCACAGTCAAATGCAACTCCTCTTGTATCTGCGGCTACAAGAGGGCATACGGATATTGTTGAATTGTTACTATCTTATGATCCTAGTCAATTGGAGATAGCTAGATCCAATGGAAAGAATGCACTTCATTTATCTGCACGCCAGGGATATGTTGATATTGTCAATATATTGTTAGGGAAGGACCCGCAGCTTGCTCGAAGGACTGATAAGAAAGGACAAACGCCGCTTCATATGGCGGTCAAAGGGGTTAACTGTGAAGTGGTGAAGTTGCTTCTTGCTGCTGATGGTGCAAGTGTCATGCTTCCTGACAAGTTTGGCAATACTGCATTGCATGTAGCCACCAGGAAGAAGAGGGTAGAGGTAATATCTTAGCTGCTCAATTTTAAACATTGATATGATACATAAAGTAGTGTAACTGCAAAACCATGTGGAGTTCGCTAGTTATATATGTCATATAGTTTTTACATCTACAACGATGCCTTTATTTTGAGTAATATAACAAACATGTCTGATTTTAACTTGAAGAGTGAACTAGTTATGACACACAAGAGTTGATGCAGATAGTGAATGAGTTGTTGCTTCTTCCCGACACCAATGCGAATGCCCTCACAAGAGACCACAAAACACCTCTTGACCTTGCGGAAGCACTTCCAATATCAGAAGAGATTTTGGAGATCAAGGACTCACTTATTCGTTATGGTGCAGTTAAAGCCAATGATCTCAACCAGCCAAGGGACGAGCTGAGGAAAACCATGACTCAGATTAAGAAAGATGTTTCTTTTCAGCTTGAACAAACTCGAAAAACAAACAAGAATGTGAATGGGATTGCCAAGGAGCTGCGCAAGTTGCACAGAGCAGGAATCAACAATGCTACCAACTCTGTAACTGTGGTTTCTGTGCTATTTGCAACGGTTGCATTTGCAGCACTTTTCACAGTCCCTGGTGGGGATCATGATAATGGGATGGCTGTGATGGTTCACACTGCATCTTTCAAGACCTTTTTCATCTCTAATGCTATTGCACTTTTCACTTCATTGGCTGTGGTGGTGGTTCAAATAACTGTTGTTAGAGGGGAGATAAAGTCTGAGAGAAGGGTTACAGAGGTGATCAATAAGATGATGTGGTTAGCGTCTGTGTGCACCTCAGTTTCATTTGTTGCAGCATCTTATATAGTAGTTGGTCGACGCAGCCTGTGGGCTGCAATCCTTGTTACTGTTGTAGGGGGGATTGTAATGGGTGGTGTTCTTGGAACAATGACATACTATGTTATCAAATCCAAACGTCACCGAAGAGTGAGGAAGAAAGAGAAGATCTCAAGGAATGGAACACATTCATGGCGTAATTCTGATTCGGAATCAGAAGTAAATCCAATTTATGCTATTTAA

Protein sequence

>MS.gene018518.t1

MDHPAGHAPLSEPNTPTTPRPTLFLSTSGKALLVSNSNKSLVISNSGKRLVETPSKKKYVKQVTGRHNDTELHLAAQRGDAAAVRNILAEIDDQMMGTLSGAEFDAEVADIRSAIVNEVNDLGETALFTAAEKGRFDVVKELLPYTTKEGLSCKNRSGFDPLHIAANQGHKEIVQLLLDHDPELIKTFAQSNATPLVSAATRGHTDIVELLLSYDPSQLEIARSNGKNALHLSARQGYVDIVNILLGKDPQLARRTDKKGQTPLHMAVKGVNCEVVKLLLAADGASVMLPDKFGNTALHVATRKKRVEIVNELLLLPDTNANALTRDHKTPLDLAEALPISEEILEIKDSLIRYGAVKANDLNQPRDELRKTMTQIKKDVSFQLEQTRKTNKNVNGIAKELRKLHRAGINNATNSVTVVSVLFATVAFAALFTVPGGDHDNGMAVMVHTASFKTFFISNAIALFTSLAVVVVQITVVRGEIKSERRVTEVINKMMWLASVCTSVSFVAASYIVVGRRSLWAAILVTVVGGIVMGGVLGTMTYYVIKSKRHRRVRKKEKISRNGTHSWRNSDSESEVNPIYAI