Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018518.t1 | XP_003625554.1 | 98.6 | 582 | 8 | 0 | 1 | 582 | 1 | 582 | 1.20E-206 | 729.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018518.t1 | Q9C7A2 | 76.1 | 522 | 123 | 2 | 63 | 582 | 69 | 590 | 2.7e-127 | 457.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018518.t1 | G7L1N1 | 98.6 | 582 | 8 | 0 | 1 | 582 | 1 | 582 | 8.5e-207 | 729.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018518.t1 | MTR_7g100430 | 98.797 | 582 | 7 | 0 | 1 | 582 | 1 | 582 | 0.0 | 1178 |
MS.gene018518.t1 | MTR_1g115575 | 73.358 | 548 | 139 | 4 | 41 | 582 | 47 | 593 | 0.0 | 809 |
MS.gene018518.t1 | MTR_2g096190 | 44.767 | 516 | 245 | 7 | 50 | 548 | 10 | 502 | 1.25e-127 | 385 |
MS.gene018518.t1 | MTR_4g062100 | 44.618 | 511 | 245 | 8 | 56 | 551 | 19 | 506 | 2.97e-126 | 382 |
MS.gene018518.t1 | MTR_7g117620 | 40.706 | 538 | 288 | 4 | 55 | 582 | 30 | 546 | 6.34e-117 | 358 |
MS.gene018518.t1 | MTR_1g032100 | 43.333 | 480 | 254 | 6 | 120 | 582 | 53 | 531 | 1.27e-116 | 357 |
MS.gene018518.t1 | MTR_7g100390 | 40.260 | 539 | 284 | 6 | 61 | 582 | 3 | 520 | 4.25e-109 | 337 |
MS.gene018518.t1 | MTR_8g105260 | 39.876 | 484 | 265 | 7 | 120 | 582 | 60 | 538 | 6.28e-107 | 332 |
MS.gene018518.t1 | MTR_2g101310 | 27.033 | 492 | 283 | 12 | 157 | 575 | 135 | 623 | 4.69e-36 | 143 |
MS.gene018518.t1 | MTR_2g101310 | 25.991 | 227 | 132 | 4 | 112 | 303 | 24 | 249 | 1.45e-14 | 77.4 |
MS.gene018518.t1 | MTR_2g101320 | 25.408 | 429 | 282 | 10 | 122 | 514 | 137 | 563 | 1.56e-22 | 102 |
MS.gene018518.t1 | MTR_2g101320 | 25.161 | 310 | 208 | 6 | 69 | 359 | 37 | 341 | 9.64e-15 | 77.8 |
MS.gene018518.t1 | MTR_2g101320 | 25.207 | 242 | 157 | 5 | 106 | 335 | 18 | 247 | 8.16e-14 | 74.7 |
MS.gene018518.t1 | MTR_1g069110 | 26.110 | 383 | 240 | 9 | 162 | 512 | 18 | 389 | 5.18e-22 | 99.8 |
MS.gene018518.t1 | MTR_2g101310 | 25.613 | 367 | 203 | 9 | 157 | 453 | 135 | 501 | 2.88e-19 | 91.7 |
MS.gene018518.t1 | MTR_2g101310 | 25.991 | 227 | 132 | 4 | 112 | 303 | 24 | 249 | 3.85e-14 | 75.5 |
MS.gene018518.t1 | MTR_3g105650 | 24.208 | 442 | 272 | 16 | 124 | 561 | 38 | 420 | 4.55e-18 | 87.4 |
MS.gene018518.t1 | MTR_5g043640 | 34.463 | 177 | 111 | 4 | 124 | 298 | 20 | 193 | 8.62e-17 | 80.9 |
MS.gene018518.t1 | MTR_8g073260 | 25.201 | 373 | 206 | 14 | 69 | 437 | 8 | 311 | 1.63e-16 | 82.8 |
MS.gene018518.t1 | MTR_5g085810 | 24.286 | 420 | 256 | 14 | 162 | 524 | 273 | 687 | 3.52e-16 | 82.4 |
MS.gene018518.t1 | MTR_8g080080 | 30.918 | 207 | 123 | 6 | 162 | 348 | 189 | 395 | 2.78e-15 | 79.7 |
MS.gene018518.t1 | MTR_8g080080 | 26.007 | 273 | 170 | 10 | 65 | 316 | 133 | 394 | 3.49e-12 | 69.7 |
MS.gene018518.t1 | MTR_6g027840 | 31.000 | 200 | 133 | 4 | 116 | 315 | 170 | 364 | 2.73e-14 | 76.3 |
MS.gene018518.t1 | MTR_6g027840 | 30.918 | 207 | 135 | 6 | 111 | 314 | 129 | 330 | 3.01e-13 | 72.8 |
MS.gene018518.t1 | MTR_3g058550 | 30.539 | 167 | 98 | 3 | 118 | 266 | 2 | 168 | 6.57e-14 | 71.6 |
MS.gene018518.t1 | MTR_5g085480 | 26.502 | 283 | 170 | 10 | 66 | 314 | 87 | 365 | 8.02e-14 | 75.1 |
MS.gene018518.t1 | MTR_1g089180 | 28.926 | 242 | 134 | 8 | 119 | 332 | 213 | 444 | 2.93e-13 | 72.8 |
MS.gene018518.t1 | MTR_2g096760 | 30.332 | 211 | 125 | 5 | 120 | 314 | 11 | 215 | 3.16e-13 | 72.4 |
MS.gene018518.t1 | MTR_8g040930 | 22.951 | 366 | 184 | 11 | 146 | 472 | 12 | 318 | 3.59e-12 | 68.6 |
MS.gene018518.t1 | MTR_8g041240 | 22.951 | 366 | 184 | 11 | 146 | 472 | 12 | 318 | 3.59e-12 | 68.6 |
MS.gene018518.t1 | MTR_3g055310 | 27.143 | 140 | 95 | 2 | 399 | 531 | 301 | 440 | 6.44e-12 | 68.6 |
MS.gene018518.t1 | MTR_3g055310 | 27.143 | 140 | 95 | 2 | 399 | 531 | 329 | 468 | 6.99e-12 | 68.6 |
MS.gene018518.t1 | MTR_3g055310 | 27.068 | 133 | 90 | 2 | 406 | 531 | 256 | 388 | 7.61e-12 | 67.8 |
MS.gene018518.t1 | MTR_1g112830 | 29.730 | 185 | 124 | 4 | 114 | 296 | 160 | 340 | 7.66e-12 | 68.6 |
MS.gene018518.t1 | MTR_3g055310 | 27.143 | 140 | 95 | 2 | 399 | 531 | 327 | 466 | 7.66e-12 | 68.2 |
MS.gene018518.t1 | MTR_3g055310 | 27.143 | 140 | 95 | 2 | 399 | 531 | 354 | 493 | 8.80e-12 | 68.2 |
MS.gene018518.t1 | MTR_3g055310 | 27.143 | 140 | 95 | 2 | 399 | 531 | 186 | 325 | 9.26e-12 | 67.4 |
MS.gene018518.t1 | MTR_3g051060 | 29.518 | 166 | 100 | 3 | 118 | 266 | 54 | 219 | 1.08e-11 | 68.2 |
MS.gene018518.t1 | MTR_8g467780 | 21.728 | 382 | 220 | 11 | 71 | 440 | 10 | 324 | 1.18e-11 | 67.4 |
MS.gene018518.t1 | MTR_5g026800 | 33.557 | 149 | 95 | 4 | 154 | 302 | 8 | 152 | 4.89e-11 | 63.9 |
MS.gene018518.t1 | MTR_8g069880 | 24.074 | 378 | 204 | 14 | 124 | 472 | 40 | 363 | 8.07e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene018518.t1 | AT3G09550 | 73.129 | 588 | 141 | 4 | 11 | 582 | 28 | 614 | 0.0 | 838 |
MS.gene018518.t1 | AT3G09550 | 73.129 | 588 | 141 | 4 | 11 | 582 | 21 | 607 | 0.0 | 837 |
MS.gene018518.t1 | AT3G09550 | 73.129 | 588 | 141 | 4 | 11 | 582 | 21 | 607 | 0.0 | 837 |
MS.gene018518.t1 | AT3G12360 | 69.739 | 575 | 163 | 5 | 11 | 582 | 24 | 590 | 0.0 | 786 |
MS.gene018518.t1 | AT3G12360 | 69.739 | 575 | 163 | 5 | 11 | 582 | 12 | 578 | 0.0 | 785 |
MS.gene018518.t1 | AT2G31820 | 42.065 | 523 | 268 | 5 | 65 | 573 | 148 | 649 | 3.07e-122 | 375 |
MS.gene018518.t1 | AT5G60070 | 44.465 | 533 | 247 | 13 | 56 | 562 | 20 | 529 | 3.48e-119 | 364 |
MS.gene018518.t1 | AT1G07710 | 43.013 | 551 | 268 | 8 | 56 | 582 | 15 | 543 | 2.39e-118 | 362 |
MS.gene018518.t1 | AT1G07710 | 43.013 | 551 | 268 | 8 | 56 | 582 | 15 | 543 | 2.39e-118 | 362 |
MS.gene018518.t1 | AT1G05640 | 42.315 | 527 | 268 | 8 | 65 | 576 | 110 | 615 | 1.39e-113 | 352 |
MS.gene018518.t1 | AT2G01680 | 39.960 | 498 | 281 | 6 | 94 | 575 | 28 | 523 | 1.14e-111 | 344 |
MS.gene018518.t1 | AT5G02620 | 40.237 | 507 | 273 | 6 | 56 | 548 | 5 | 495 | 4.99e-104 | 324 |
MS.gene018518.t1 | AT5G02620 | 40.237 | 507 | 273 | 6 | 56 | 548 | 5 | 495 | 4.99e-104 | 324 |
MS.gene018518.t1 | AT5G02620 | 40.237 | 507 | 273 | 6 | 56 | 548 | 5 | 495 | 4.99e-104 | 324 |
MS.gene018518.t1 | AT5G02620 | 38.491 | 530 | 273 | 7 | 56 | 548 | 5 | 518 | 1.55e-98 | 310 |
MS.gene018518.t1 | AT5G02620 | 38.491 | 530 | 273 | 7 | 56 | 548 | 5 | 518 | 1.55e-98 | 310 |
MS.gene018518.t1 | AT1G34050 | 26.230 | 488 | 247 | 14 | 162 | 546 | 58 | 535 | 1.00e-33 | 135 |
MS.gene018518.t1 | AT1G10340 | 24.578 | 533 | 315 | 13 | 68 | 544 | 37 | 538 | 6.30e-32 | 130 |
MS.gene018518.t1 | AT1G10340 | 24.764 | 529 | 315 | 13 | 68 | 544 | 37 | 534 | 6.70e-32 | 130 |
MS.gene018518.t1 | AT2G24600 | 25.000 | 548 | 313 | 18 | 68 | 549 | 37 | 552 | 2.50e-30 | 126 |
MS.gene018518.t1 | AT2G24600 | 25.000 | 548 | 313 | 18 | 68 | 549 | 37 | 552 | 2.50e-30 | 126 |
MS.gene018518.t1 | AT4G03500 | 24.111 | 506 | 335 | 14 | 69 | 533 | 103 | 600 | 1.33e-29 | 124 |
MS.gene018518.t1 | AT4G03500 | 24.111 | 506 | 335 | 14 | 69 | 533 | 80 | 577 | 1.77e-29 | 123 |
MS.gene018518.t1 | AT4G03500 | 24.111 | 506 | 335 | 14 | 69 | 533 | 80 | 577 | 1.77e-29 | 123 |
MS.gene018518.t1 | AT5G54710 | 25.197 | 508 | 323 | 16 | 103 | 565 | 127 | 622 | 2.01e-28 | 120 |
MS.gene018518.t1 | AT5G54710 | 25.197 | 508 | 323 | 16 | 103 | 565 | 82 | 577 | 2.48e-28 | 120 |
MS.gene018518.t1 | AT1G03670 | 26.136 | 440 | 287 | 8 | 125 | 554 | 182 | 593 | 3.04e-25 | 110 |
MS.gene018518.t1 | AT5G50140 | 23.387 | 496 | 321 | 12 | 122 | 561 | 26 | 518 | 1.17e-23 | 105 |
MS.gene018518.t1 | AT4G03490 | 25.701 | 428 | 274 | 12 | 127 | 543 | 182 | 576 | 3.94e-22 | 101 |
MS.gene018518.t1 | AT4G03490 | 25.829 | 422 | 269 | 12 | 127 | 537 | 172 | 560 | 4.35e-22 | 100 |
MS.gene018518.t1 | AT4G03490 | 25.829 | 422 | 269 | 12 | 127 | 537 | 182 | 570 | 4.84e-22 | 100 |
MS.gene018518.t1 | AT4G03470 | 25.098 | 510 | 336 | 15 | 42 | 532 | 138 | 620 | 4.65e-21 | 97.8 |
MS.gene018518.t1 | AT5G54700 | 25.067 | 375 | 211 | 9 | 195 | 535 | 4 | 342 | 6.19e-21 | 96.7 |
MS.gene018518.t1 | AT4G03460 | 24.762 | 420 | 271 | 9 | 120 | 525 | 158 | 546 | 2.06e-20 | 95.5 |
MS.gene018518.t1 | AT4G03460 | 24.762 | 420 | 271 | 9 | 120 | 525 | 190 | 578 | 2.73e-20 | 95.5 |
MS.gene018518.t1 | AT5G54700 | 27.469 | 324 | 188 | 10 | 249 | 550 | 20 | 318 | 5.15e-20 | 92.0 |
MS.gene018518.t1 | AT4G14390 | 23.554 | 484 | 331 | 12 | 70 | 528 | 168 | 637 | 2.64e-19 | 92.4 |
MS.gene018518.t1 | AT3G18670 | 24.224 | 483 | 295 | 16 | 123 | 534 | 84 | 566 | 1.28e-18 | 90.1 |
MS.gene018518.t1 | AT4G14390 | 23.602 | 483 | 331 | 12 | 70 | 528 | 149 | 617 | 2.07e-18 | 89.7 |
MS.gene018518.t1 | AT4G14390 | 27.805 | 205 | 132 | 6 | 66 | 268 | 227 | 417 | 1.00e-11 | 68.2 |
MS.gene018518.t1 | AT4G14390 | 23.602 | 483 | 331 | 12 | 70 | 528 | 168 | 636 | 2.54e-18 | 89.4 |
MS.gene018518.t1 | AT4G14390 | 27.805 | 205 | 132 | 6 | 66 | 268 | 246 | 436 | 1.01e-11 | 68.2 |
MS.gene018518.t1 | AT2G03430 | 35.057 | 174 | 108 | 4 | 127 | 298 | 16 | 186 | 3.83e-18 | 84.7 |
MS.gene018518.t1 | AT4G03490 | 25.139 | 541 | 305 | 18 | 60 | 537 | 9 | 512 | 1.16e-17 | 87.4 |
MS.gene018518.t1 | AT4G03490 | 25.046 | 547 | 310 | 18 | 60 | 543 | 19 | 528 | 1.43e-17 | 87.0 |
MS.gene018518.t1 | AT4G03480 | 25.641 | 351 | 227 | 8 | 155 | 474 | 312 | 659 | 1.52e-16 | 83.6 |
MS.gene018518.t1 | AT4G03480 | 25.641 | 351 | 227 | 8 | 155 | 474 | 309 | 656 | 1.61e-16 | 83.6 |
MS.gene018518.t1 | AT5G15500 | 29.557 | 203 | 122 | 5 | 125 | 309 | 40 | 239 | 1.87e-16 | 82.8 |
MS.gene018518.t1 | AT1G14500 | 24.625 | 333 | 177 | 8 | 155 | 467 | 68 | 346 | 1.93e-16 | 82.4 |
MS.gene018518.t1 | AT5G51160 | 26.990 | 289 | 168 | 7 | 155 | 437 | 44 | 295 | 2.02e-15 | 79.3 |
MS.gene018518.t1 | AT4G10720 | 22.727 | 440 | 272 | 15 | 125 | 552 | 39 | 422 | 4.45e-15 | 78.2 |
MS.gene018518.t1 | AT2G24600 | 23.776 | 429 | 242 | 13 | 68 | 442 | 37 | 434 | 6.09e-15 | 78.2 |
MS.gene018518.t1 | AT2G24600 | 23.776 | 429 | 242 | 13 | 68 | 442 | 37 | 434 | 6.09e-15 | 78.2 |
MS.gene018518.t1 | AT4G10720 | 23.714 | 350 | 223 | 9 | 125 | 469 | 39 | 349 | 3.84e-14 | 75.1 |
MS.gene018518.t1 | AT4G03450 | 25.594 | 379 | 233 | 11 | 120 | 480 | 184 | 531 | 6.61e-14 | 75.1 |
MS.gene018518.t1 | AT4G03450 | 25.594 | 379 | 233 | 11 | 120 | 480 | 184 | 531 | 1.07e-13 | 74.7 |
MS.gene018518.t1 | AT4G14390 | 24.619 | 394 | 248 | 10 | 70 | 435 | 149 | 521 | 1.57e-13 | 73.9 |
MS.gene018518.t1 | AT4G14390 | 27.805 | 205 | 132 | 6 | 66 | 268 | 227 | 417 | 2.55e-11 | 66.6 |
MS.gene018518.t1 | AT4G03440 | 24.752 | 404 | 253 | 13 | 162 | 545 | 317 | 689 | 6.89e-13 | 72.0 |
MS.gene018518.t1 | AT3G18670 | 28.169 | 142 | 96 | 1 | 399 | 534 | 480 | 621 | 7.59e-13 | 72.0 |
MS.gene018518.t1 | AT4G03440 | 24.752 | 404 | 253 | 13 | 162 | 545 | 310 | 682 | 8.08e-13 | 72.0 |
MS.gene018518.t1 | AT4G03440 | 24.752 | 404 | 253 | 13 | 162 | 545 | 310 | 682 | 8.08e-13 | 72.0 |
MS.gene018518.t1 | AT3G04710 | 28.906 | 256 | 151 | 9 | 43 | 280 | 30 | 272 | 1.25e-12 | 70.5 |
MS.gene018518.t1 | AT3G04710 | 28.906 | 256 | 151 | 9 | 43 | 280 | 254 | 496 | 1.65e-12 | 70.9 |
MS.gene018518.t1 | AT2G14255 | 28.270 | 237 | 156 | 7 | 125 | 352 | 26 | 257 | 2.90e-12 | 69.7 |
MS.gene018518.t1 | AT3G04710 | 28.516 | 256 | 151 | 9 | 43 | 280 | 30 | 271 | 2.92e-11 | 66.2 |
MS.gene018518.t1 | AT4G19150 | 32.143 | 140 | 92 | 3 | 162 | 301 | 20 | 156 | 7.52e-11 | 63.2 |
Find 154 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCAATATCAGAAGAGATTT+TGG | 0.120998 | 7.4:+9819641 | MS.gene018518:CDS |
GATATTGTCAATATATTGTT+AGG | 0.214361 | 7.4:+9819145 | MS.gene018518:CDS |
GACTATTAAATAGCATAAAT+TGG | 0.217594 | 7.4:-9820359 | None:intergenic |
AGTCCTTCTTTGGTGGTATA+AGG | 0.227846 | 7.4:-9818536 | None:intergenic |
TCTAGGGGTGGTTGGGGTGT+TGG | 0.234547 | 7.4:-9818144 | None:intergenic |
GCAATCCTTGTTACTGTTGT+AGG | 0.249078 | 7.4:+9820191 | MS.gene018518:CDS |
TCCCTCGTCATTTCCAATTC+TGG | 0.254175 | 7.4:+9818224 | MS.gene018518:CDS |
TCCAAAATCTCTTCTGATAT+TGG | 0.257559 | 7.4:-9819642 | None:intergenic |
GGGTGGGTCTAGGGGTGGTT+GGG | 0.257724 | 7.4:-9818151 | None:intergenic |
CCTTGGCTGGTTGAGATCAT+TGG | 0.276643 | 7.4:-9819703 | None:intergenic |
TACCTCTACCCTCTTCTTCC+TGG | 0.277013 | 7.4:-9819332 | None:intergenic |
TTTACAAGATAGTCCTTCTT+TGG | 0.279483 | 7.4:-9818546 | None:intergenic |
ATTGTAATGGGTGGTGTTCT+TGG | 0.280140 | 7.4:+9820218 | MS.gene018518:CDS |
CTAGGGGTGGTTGGGGTGTT+GGG | 0.284653 | 7.4:-9818143 | None:intergenic |
GACGAGGCGTTTGCCAGAAT+TGG | 0.304324 | 7.4:-9818237 | None:intergenic |
GGTGGGTCTAGGGGTGGTTG+GGG | 0.319326 | 7.4:-9818150 | None:intergenic |
CCTCACTCTTCGGTGACGTT+TGG | 0.320261 | 7.4:-9820267 | None:intergenic |
CCTGGTGGGGATCATGATAA+TGG | 0.324667 | 7.4:+9819930 | MS.gene018518:CDS |
TGCCGGAAGTGGAGAGGAAT+AGG | 0.343790 | 7.4:-9818172 | None:intergenic |
GAGAGGAATAGGGTGGGTCT+AGG | 0.344264 | 7.4:-9818161 | None:intergenic |
GGTGGTTGGGGTGTTGGGTT+CGG | 0.348554 | 7.4:-9818138 | None:intergenic |
AGGGTGGGTCTAGGGGTGGT+TGG | 0.353657 | 7.4:-9818152 | None:intergenic |
ATGCTGAAGTTGCGGATATA+AGG | 0.362620 | 7.4:+9818420 | MS.gene018518:CDS |
GGAGACAAGAAGGGCTTTGC+CGG | 0.364614 | 7.4:-9818189 | None:intergenic |
GACGAGGGATTTGTTGGAGT+TGG | 0.371967 | 7.4:-9818210 | None:intergenic |
CAATCCTTGTTACTGTTGTA+GGG | 0.374512 | 7.4:+9820192 | MS.gene018518:CDS |
CACTTCATTGGCTGTGGTGG+TGG | 0.381287 | 7.4:+9820019 | MS.gene018518:CDS |
TCCTCAGCTCGTCCCTTGGC+TGG | 0.388294 | 7.4:-9819716 | None:intergenic |
GAAAGAGGAGCGTGGCCGGC+GGG | 0.390146 | 7.4:-9818116 | None:intergenic |
GAGGAATAGGGTGGGTCTAG+GGG | 0.395584 | 7.4:-9818159 | None:intergenic |
AAGGACTCACTTATTCGTTA+TGG | 0.399648 | 7.4:+9819669 | MS.gene018518:CDS |
GTCCTTCTTTGGTGGTATAA+GGG | 0.400914 | 7.4:-9818535 | None:intergenic |
AGAGGAATAGGGTGGGTCTA+GGG | 0.406165 | 7.4:-9818160 | None:intergenic |
GTTCAAATAACTGTTGTTAG+AGG | 0.406250 | 7.4:+9820041 | MS.gene018518:CDS |
GTGCAACTTGCGCAGCTCCT+TGG | 0.406953 | 7.4:-9819820 | None:intergenic |
TCTCTTTCTTCCTCACTCTT+CGG | 0.407155 | 7.4:-9820277 | None:intergenic |
GCGGTGATGCTGCCGCTGTT+AGG | 0.410842 | 7.4:+9818339 | MS.gene018518:CDS |
CGCTTCATATGGCGGTCAAA+GGG | 0.411725 | 7.4:+9819215 | MS.gene018518:CDS |
ATCTTATGATCCTAGTCAAT+TGG | 0.414022 | 7.4:+9819063 | MS.gene018518:CDS |
AAGTTGCTTCTTGCTGCTGA+TGG | 0.419284 | 7.4:+9819256 | MS.gene018518:CDS |
GTCATGCTTCCTGACAAGTT+TGG | 0.426669 | 7.4:+9819286 | MS.gene018518:CDS |
AAAACAAACAAGAATGTGAA+TGG | 0.428260 | 7.4:+9819792 | MS.gene018518:CDS |
TGCCGCTGTTAGGAATATTC+TGG | 0.433235 | 7.4:+9818349 | MS.gene018518:CDS |
GGAAATGACGAGGGATTTGT+TGG | 0.436881 | 7.4:-9818216 | None:intergenic |
AAGAAGGGCTTTGCCGGAAG+TGG | 0.440749 | 7.4:-9818183 | None:intergenic |
ATGAAGTGCATTCTTTCCAT+TGG | 0.445344 | 7.4:-9819098 | None:intergenic |
GGAGATAAAGTCTGAGAGAA+GGG | 0.447714 | 7.4:+9820064 | MS.gene018518:CDS |
TTCGGAAAGAGGAGCGTGGC+CGG | 0.449506 | 7.4:-9818120 | None:intergenic |
TTCATGGCGTAATTCTGATT+CGG | 0.456908 | 7.4:+9820322 | MS.gene018518:CDS |
CAAGGAATGGAACACATTCA+TGG | 0.458877 | 7.4:+9820306 | MS.gene018518:CDS |
GAATAGGGTGGGTCTAGGGG+TGG | 0.461324 | 7.4:-9818156 | None:intergenic |
AGGGCATTCGCATTGGTGTC+GGG | 0.461867 | 7.4:-9819576 | None:intergenic |
GCAGTATTGCCAAACTTGTC+AGG | 0.463768 | 7.4:-9819295 | None:intergenic |
ACTTCATTTATCTGCACGCC+AGG | 0.464249 | 7.4:+9819114 | MS.gene018518:CDS |
GCAGCATCTTATATAGTAGT+TGG | 0.467155 | 7.4:+9820149 | MS.gene018518:CDS |
CTGGTGGGGATCATGATAAT+GGG | 0.468589 | 7.4:+9819931 | MS.gene018518:CDS |
GCAAATGTCTTGATTAGCTC+TGG | 0.471908 | 7.4:-9818971 | None:intergenic |
ATCTTTCTTAATCTGAGTCA+TGG | 0.474155 | 7.4:-9819742 | None:intergenic |
AGGACAAACGCCGCTTCATA+TGG | 0.478041 | 7.4:+9819204 | MS.gene018518:CDS |
ACCCTATTCCTCTCCACTTC+CGG | 0.480160 | 7.4:+9818170 | MS.gene018518:CDS |
GAGGGCATTCGCATTGGTGT+CGG | 0.481466 | 7.4:-9819577 | None:intergenic |
ACAAGATAGTCCTTCTTTGG+TGG | 0.484767 | 7.4:-9818543 | None:intergenic |
GGGGTGTTGGGTTCGGAAAG+AGG | 0.490833 | 7.4:-9818131 | None:intergenic |
CTGCGCAAGTTGCACAGAGC+AGG | 0.494791 | 7.4:+9819828 | MS.gene018518:CDS |
GGGAGATAAAGTCTGAGAGA+AGG | 0.495604 | 7.4:+9820063 | MS.gene018518:CDS |
TCTTGTGAGGGCATTCGCAT+TGG | 0.498367 | 7.4:-9819583 | None:intergenic |
GCCGGAAGTGGAGAGGAATA+GGG | 0.499698 | 7.4:-9818171 | None:intergenic |
CCGCTTCATATGGCGGTCAA+AGG | 0.504074 | 7.4:+9819214 | MS.gene018518:CDS |
TTCAAATAACTGTTGTTAGA+GGG | 0.504770 | 7.4:+9820042 | MS.gene018518:CDS |
AATAGCATTAGAGATGAAAA+AGG | 0.505791 | 7.4:-9819988 | None:intergenic |
TTTCACTTCATTGGCTGTGG+TGG | 0.508039 | 7.4:+9820016 | MS.gene018518:CDS |
TCTTGATTAGCTCTGGATCA+TGG | 0.513054 | 7.4:-9818964 | None:intergenic |
CTCCCTTATACCACCAAAGA+AGG | 0.513242 | 7.4:+9818533 | MS.gene018518:CDS |
TAGTTGGTCGACGCAGCCTG+TGG | 0.515142 | 7.4:+9820165 | MS.gene018518:CDS |
ATCCTTGTTACTGTTGTAGG+GGG | 0.516823 | 7.4:+9820194 | MS.gene018518:CDS |
TGAGATTGATGATCAAATGA+TGG | 0.517261 | 7.4:+9818373 | MS.gene018518:CDS |
TGTTGGAGTTGGAGACAAGA+AGG | 0.518725 | 7.4:-9818199 | None:intergenic |
GGAAAGAGGAGCGTGGCCGG+CGG | 0.518995 | 7.4:-9818117 | None:intergenic |
AAACAAACAAGAATGTGAAT+GGG | 0.523203 | 7.4:+9819793 | MS.gene018518:CDS |
TGTTAACGAAGTTAATGACT+TGG | 0.523723 | 7.4:+9818451 | MS.gene018518:CDS |
TGCGGCTACAAGAGGGCATA+CGG | 0.525316 | 7.4:+9819021 | MS.gene018518:CDS |
CTAGCTATCTCCAATTGACT+AGG | 0.532153 | 7.4:-9819073 | None:intergenic |
AAAGAGGAGCGTGGCCGGCG+GGG | 0.535243 | 7.4:-9818115 | None:intergenic |
GTTAACGAAGTTAATGACTT+GGG | 0.535760 | 7.4:+9818452 | MS.gene018518:CDS |
GGAAGAAAGAGAAGATCTCA+AGG | 0.537556 | 7.4:+9820288 | MS.gene018518:CDS |
TTGCATATTGCAGCAAATCA+AGG | 0.538026 | 7.4:+9818590 | MS.gene018518:CDS |
CTCGGTGTCATTATGACGAC+CGG | 0.538570 | 7.4:-9818297 | None:intergenic |
GGTTTCTGTGCTATTTGCAA+CGG | 0.540421 | 7.4:+9819881 | MS.gene018518:CDS |
ATATTGTCAATATATTGTTA+GGG | 0.541111 | 7.4:+9819146 | MS.gene018518:CDS |
AAAGAGAAGATCTCAAGGAA+TGG | 0.541144 | 7.4:+9820293 | MS.gene018518:CDS |
CAGTCCTTCGAGCAAGCTGC+GGG | 0.546468 | 7.4:-9819174 | None:intergenic |
CCAATGATCTCAACCAGCCA+AGG | 0.546813 | 7.4:+9819703 | MS.gene018518:CDS |
TGTCAATATATTGTTAGGGA+AGG | 0.552145 | 7.4:+9819150 | MS.gene018518:CDS |
CTTGTATCTGCGGCTACAAG+AGG | 0.552318 | 7.4:+9819013 | MS.gene018518:CDS |
CCATTATCATGATCCCCACC+AGG | 0.552472 | 7.4:-9819930 | None:intergenic |
GTCATTAACTTCGTTAACAA+TGG | 0.552902 | 7.4:-9818447 | None:intergenic |
TTGGAGATAGCTAGATCCAA+TGG | 0.558617 | 7.4:+9819082 | MS.gene018518:CDS |
TCAGTCCTTCGAGCAAGCTG+CGG | 0.564899 | 7.4:-9819175 | None:intergenic |
CTCTACCCTCTTCTTCCTGG+TGG | 0.567336 | 7.4:-9819329 | None:intergenic |
TGCTACCAACTCTGTAACTG+TGG | 0.569261 | 7.4:+9819860 | MS.gene018518:CDS |
TTGCGCAGCAAGATGAAGCT+CGG | 0.573480 | 7.4:-9818315 | None:intergenic |
GTTGGAGTTGGAGACAAGAA+GGG | 0.573938 | 7.4:-9818198 | None:intergenic |
CTGCATTGCATGTAGCCACC+AGG | 0.574200 | 7.4:+9819314 | MS.gene018518:CDS |
ACCAGCCAAGGGACGAGCTG+AGG | 0.575224 | 7.4:+9819715 | MS.gene018518:CDS |
CACCAGGAAGAAGAGGGTAG+AGG | 0.576801 | 7.4:+9819330 | MS.gene018518:CDS |
TGCAACTCCTCTTGTATCTG+CGG | 0.578451 | 7.4:+9819003 | MS.gene018518:CDS |
AATCCTTGTTACTGTTGTAG+GGG | 0.579425 | 7.4:+9820193 | MS.gene018518:CDS |
CTTCATCTTGCTGCGCAACG+CGG | 0.580064 | 7.4:+9818320 | MS.gene018518:CDS |
TCAAATAACTGTTGTTAGAG+GGG | 0.580153 | 7.4:+9820043 | MS.gene018518:CDS |
AGGACCCGCAGCTTGCTCGA+AGG | 0.582573 | 7.4:+9819170 | MS.gene018518:CDS |
CCATTCATGGATCACCCCGC+CGG | 0.583675 | 7.4:+9818101 | None:intergenic |
TGATTTGCTGCAATATGCAA+TGG | 0.587424 | 7.4:-9818587 | None:intergenic |
TGTAGCCACCAGGAAGAAGA+GGG | 0.588374 | 7.4:+9819324 | MS.gene018518:CDS |
TCCTTGTTACTGTTGTAGGG+GGG | 0.588655 | 7.4:+9820195 | MS.gene018518:CDS |
TGACAATATCAACATATCCC+TGG | 0.589135 | 7.4:-9819132 | None:intergenic |
TAACAAGGATTGCAGCCCAC+AGG | 0.594685 | 7.4:-9820181 | None:intergenic |
GAGATTGATGATCAAATGAT+GGG | 0.600031 | 7.4:+9818374 | MS.gene018518:CDS |
AGTTGGTCGACGCAGCCTGT+GGG | 0.602868 | 7.4:+9820166 | MS.gene018518:CDS |
GCTCGAAGGACTGATAAGAA+AGG | 0.603769 | 7.4:+9819184 | MS.gene018518:CDS |
ATGTAGCCACCAGGAAGAAG+AGG | 0.605868 | 7.4:+9819323 | MS.gene018518:CDS |
AGTGCTTCCGCAAGGTCAAG+AGG | 0.607646 | 7.4:-9819618 | None:intergenic |
TGATAATGGGATGGCTGTGA+TGG | 0.612051 | 7.4:+9819944 | MS.gene018518:CDS |
TGCCAGAATTGGAAATGACG+AGG | 0.612477 | 7.4:-9818226 | None:intergenic |
GTCTGAGAGAAGGGTTACAG+AGG | 0.613101 | 7.4:+9820073 | MS.gene018518:CDS |
GCCAGAATTGGAAATGACGA+GGG | 0.613573 | 7.4:-9818225 | None:intergenic |
TGGGGATCATGATAATGGGA+TGG | 0.614869 | 7.4:+9819935 | MS.gene018518:CDS |
CTTCATTTATCTGCACGCCA+GGG | 0.616151 | 7.4:+9819115 | MS.gene018518:CDS |
AGGTGATCAATAAGATGATG+TGG | 0.618952 | 7.4:+9820093 | MS.gene018518:CDS |
AAATATGTAAAACAGGTCAC+CGG | 0.619209 | 7.4:+9818278 | MS.gene018518:CDS |
TTGTATCTGCGGCTACAAGA+GGG | 0.620058 | 7.4:+9819014 | MS.gene018518:CDS |
CCTTTGACCGCCATATGAAG+CGG | 0.622609 | 7.4:-9819214 | None:intergenic |
CTTGTAGCCGCAGATACAAG+AGG | 0.624185 | 7.4:-9819010 | None:intergenic |
CAAAGGGGTTAACTGTGAAG+TGG | 0.630420 | 7.4:+9819231 | MS.gene018518:CDS |
AGAAACCACAGTTACAGAGT+TGG | 0.633035 | 7.4:-9819865 | None:intergenic |
GAATGTGAATGGGATTGCCA+AGG | 0.633102 | 7.4:+9819803 | MS.gene018518:CDS |
GGGCTTTGCCGGAAGTGGAG+AGG | 0.635402 | 7.4:-9818178 | None:intergenic |
CAATGATCTCAACCAGCCAA+GGG | 0.638090 | 7.4:+9819704 | MS.gene018518:CDS |
TCTTGCTGGGTGTCTCGACG+AGG | 0.640598 | 7.4:-9818253 | None:intergenic |
CCAAACGTCACCGAAGAGTG+AGG | 0.649993 | 7.4:+9820267 | MS.gene018518:CDS |
CAAAACACCTCTTGACCTTG+CGG | 0.650691 | 7.4:+9819611 | MS.gene018518:CDS |
GGAAGTGGAGAGGAATAGGG+TGG | 0.652742 | 7.4:-9818168 | None:intergenic |
ATATTGGAAGTGCTTCCGCA+AGG | 0.654649 | 7.4:-9819626 | None:intergenic |
AGCCAGAATATTCCTAACAG+CGG | 0.659039 | 7.4:-9818351 | None:intergenic |
ACAAACGCCGCTTCATATGG+CGG | 0.659247 | 7.4:+9819207 | MS.gene018518:CDS |
AAAACGACCTTTCTCAGCTG+CGG | 0.663709 | 7.4:-9818492 | None:intergenic |
GCAGCAAATCAAGGTCACAA+AGG | 0.668138 | 7.4:+9818599 | MS.gene018518:CDS |
GCTTCATATGGCGGTCAAAG+GGG | 0.676524 | 7.4:+9819216 | MS.gene018518:CDS |
TGGGTTCGGAAAGAGGAGCG+TGG | 0.686370 | 7.4:-9818124 | None:intergenic |
CAAATGATGGGAACGCTCAG+TGG | 0.691348 | 7.4:+9818386 | MS.gene018518:CDS |
CATTATCATGATCCCCACCA+GGG | 0.695526 | 7.4:-9819929 | None:intergenic |
TGCTGCAACAAATGAAACTG+AGG | 0.698675 | 7.4:-9820132 | None:intergenic |
GAAGTGGAGAGGAATAGGGT+GGG | 0.699796 | 7.4:-9818167 | None:intergenic |
TGAGTTTGATGCTGAAGTTG+CGG | 0.701626 | 7.4:+9818412 | MS.gene018518:CDS |
GCAATGGATCAAAACCAGAG+CGG | 0.786525 | 7.4:-9818571 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AGTTTATAGAAAAAAAATTG+TGG | + | chr7.4:9818684-9818703 | MS.gene018518:intron | 15.0% |
!! | ATATTGTCAATATATTGTTA+GGG | + | chr7.4:9819146-9819165 | MS.gene018518:CDS | 15.0% |
!! | TGTTATATTACTCAAAATAA+AGG | - | chr7.4:9819473-9819492 | None:intergenic | 15.0% |
!! | CAAGAAAAAATATGTAAAAC+AGG | + | chr7.4:9818271-9818290 | MS.gene018518:CDS | 20.0% |
!! | GATATTGTCAATATATTGTT+AGG | + | chr7.4:9819145-9819164 | MS.gene018518:CDS | 20.0% |
!! | GTTATATATATTGTTGTGAA+TGG | + | chr7.4:9818913-9818932 | MS.gene018518:intron | 20.0% |
!!! | TTTACATATTTTTTCTTGCT+GGG | - | chr7.4:9818269-9818288 | None:intergenic | 20.0% |
!!! | TTTTACATATTTTTTCTTGC+TGG | - | chr7.4:9818270-9818289 | None:intergenic | 20.0% |
! | AAAACAAACAAGAATGTGAA+TGG | + | chr7.4:9819792-9819811 | MS.gene018518:CDS | 25.0% |
! | AAACAAACAAGAATGTGAAT+GGG | + | chr7.4:9819793-9819812 | MS.gene018518:CDS | 25.0% |
! | AATAGCATTAGAGATGAAAA+AGG | - | chr7.4:9819991-9820010 | None:intergenic | 25.0% |
! | ATATATATTGTTGTGAATGG+TGG | + | chr7.4:9818916-9818935 | MS.gene018518:intron | 25.0% |
! | TTCAAATAACTGTTGTTAGA+GGG | + | chr7.4:9820042-9820061 | MS.gene018518:CDS | 25.0% |
AAAATCATAACCTGACTGTT+TGG | - | chr7.4:9818860-9818879 | None:intergenic | 30.0% | |
AAATATGTAAAACAGGTCAC+CGG | + | chr7.4:9818278-9818297 | MS.gene018518:CDS | 30.0% | |
ATCTTATGATCCTAGTCAAT+TGG | + | chr7.4:9819063-9819082 | MS.gene018518:CDS | 30.0% | |
ATCTTTCTTAATCTGAGTCA+TGG | - | chr7.4:9819745-9819764 | None:intergenic | 30.0% | |
CTTATTTCCATAAGCTCTTT+AGG | + | chr7.4:9818729-9818748 | MS.gene018518:intron | 30.0% | |
GTCATTAACTTCGTTAACAA+TGG | - | chr7.4:9818450-9818469 | None:intergenic | 30.0% | |
GTTAACGAAGTTAATGACTT+GGG | + | chr7.4:9818452-9818471 | MS.gene018518:CDS | 30.0% | |
GTTCAAATAACTGTTGTTAG+AGG | + | chr7.4:9820041-9820060 | MS.gene018518:CDS | 30.0% | |
TCAAATAACTGTTGTTAGAG+GGG | + | chr7.4:9820043-9820062 | MS.gene018518:CDS | 30.0% | |
TCCAAAATCTCTTCTGATAT+TGG | - | chr7.4:9819645-9819664 | None:intergenic | 30.0% | |
TGTCAATATATTGTTAGGGA+AGG | + | chr7.4:9819150-9819169 | MS.gene018518:CDS | 30.0% | |
TGTTAACGAAGTTAATGACT+TGG | + | chr7.4:9818451-9818470 | MS.gene018518:CDS | 30.0% | |
TTTACAAGATAGTCCTTCTT+TGG | - | chr7.4:9818549-9818568 | None:intergenic | 30.0% | |
! | GAGATTGATGATCAAATGAT+GGG | + | chr7.4:9818374-9818393 | MS.gene018518:CDS | 30.0% |
! | TATTGCACTTTTCACTTCAT+TGG | + | chr7.4:9820007-9820026 | MS.gene018518:CDS | 30.0% |
! | TCCAATATCAGAAGAGATTT+TGG | + | chr7.4:9819641-9819660 | MS.gene018518:CDS | 30.0% |
! | TCTTCAATGAGTATTGTCAT+AGG | + | chr7.4:9818640-9818659 | MS.gene018518:intron | 30.0% |
! | TGAGATTGATGATCAAATGA+TGG | + | chr7.4:9818373-9818392 | MS.gene018518:CDS | 30.0% |
AAAGAGAAGATCTCAAGGAA+TGG | + | chr7.4:9820293-9820312 | MS.gene018518:CDS | 35.0% | |
AAGGACTCACTTATTCGTTA+TGG | + | chr7.4:9819669-9819688 | MS.gene018518:CDS | 35.0% | |
AATCCTTGTTACTGTTGTAG+GGG | + | chr7.4:9820193-9820212 | MS.gene018518:CDS | 35.0% | |
AGGTGATCAATAAGATGATG+TGG | + | chr7.4:9820093-9820112 | MS.gene018518:CDS | 35.0% | |
ATGAAGTGCATTCTTTCCAT+TGG | - | chr7.4:9819101-9819120 | None:intergenic | 35.0% | |
CAATCCTTGTTACTGTTGTA+GGG | + | chr7.4:9820192-9820211 | MS.gene018518:CDS | 35.0% | |
GCAGCATCTTATATAGTAGT+TGG | + | chr7.4:9820149-9820168 | MS.gene018518:CDS | 35.0% | |
TAGCTATCCTAAAGAGCTTA+TGG | - | chr7.4:9818739-9818758 | None:intergenic | 35.0% | |
TGACAATATCAACATATCCC+TGG | - | chr7.4:9819135-9819154 | None:intergenic | 35.0% | |
TTCATGGCGTAATTCTGATT+CGG | + | chr7.4:9820322-9820341 | MS.gene018518:CDS | 35.0% | |
TTGCATATTGCAGCAAATCA+AGG | + | chr7.4:9818590-9818609 | MS.gene018518:CDS | 35.0% | |
! | ACGTTTTTATCCAAACAGTC+AGG | + | chr7.4:9818847-9818866 | MS.gene018518:intron | 35.0% |
!! | AGAAGAGATTTTGGAGATCA+AGG | + | chr7.4:9819650-9819669 | MS.gene018518:CDS | 35.0% |
!! | TGATTTGCTGCAATATGCAA+TGG | - | chr7.4:9818590-9818609 | None:intergenic | 35.0% |
ACAAGATAGTCCTTCTTTGG+TGG | - | chr7.4:9818546-9818565 | None:intergenic | 40.0% | |
AGAAACCACAGTTACAGAGT+TGG | - | chr7.4:9819868-9819887 | None:intergenic | 40.0% | |
AGCCAGAATATTCCTAACAG+CGG | - | chr7.4:9818354-9818373 | None:intergenic | 40.0% | |
AGTGTAACTGCAAAACCATG+TGG | + | chr7.4:9819400-9819419 | MS.gene018518:intron | 40.0% | |
ATCCTTGTTACTGTTGTAGG+GGG | + | chr7.4:9820194-9820213 | MS.gene018518:CDS | 40.0% | |
ATGCTGAAGTTGCGGATATA+AGG | + | chr7.4:9818420-9818439 | MS.gene018518:CDS | 40.0% | |
CAAGGAATGGAACACATTCA+TGG | + | chr7.4:9820306-9820325 | MS.gene018518:CDS | 40.0% | |
CTAGCTATCTCCAATTGACT+AGG | - | chr7.4:9819076-9819095 | None:intergenic | 40.0% | |
CTATCTTGTAAAAACCGCTC+TGG | + | chr7.4:9818557-9818576 | MS.gene018518:CDS | 40.0% | |
GCAATCCTTGTTACTGTTGT+AGG | + | chr7.4:9820191-9820210 | MS.gene018518:CDS | 40.0% | |
GGAAGAAAGAGAAGATCTCA+AGG | + | chr7.4:9820288-9820307 | MS.gene018518:CDS | 40.0% | |
GGAGATAAAGTCTGAGAGAA+GGG | + | chr7.4:9820064-9820083 | MS.gene018518:CDS | 40.0% | |
TATAACTAGCGAACTCCACA+TGG | - | chr7.4:9819418-9819437 | None:intergenic | 40.0% | |
TCTCTTTCTTCCTCACTCTT+CGG | - | chr7.4:9820280-9820299 | None:intergenic | 40.0% | |
TGAGTTTGATGCTGAAGTTG+CGG | + | chr7.4:9818412-9818431 | MS.gene018518:CDS | 40.0% | |
TGCTGCAACAAATGAAACTG+AGG | - | chr7.4:9820135-9820154 | None:intergenic | 40.0% | |
TTGGAGATAGCTAGATCCAA+TGG | + | chr7.4:9819082-9819101 | MS.gene018518:CDS | 40.0% | |
! | AGTCCTTCTTTGGTGGTATA+AGG | - | chr7.4:9818539-9818558 | None:intergenic | 40.0% |
! | GCAAATGTCTTGATTAGCTC+TGG | - | chr7.4:9818974-9818993 | None:intergenic | 40.0% |
! | GTCCTTCTTTGGTGGTATAA+GGG | - | chr7.4:9818538-9818557 | None:intergenic | 40.0% |
! | TGTTTTGTGGTCTCTTGTGA+GGG | - | chr7.4:9819598-9819617 | None:intergenic | 40.0% |
!! | ACTTTTCACTTCATTGGCTG+TGG | + | chr7.4:9820013-9820032 | MS.gene018518:CDS | 40.0% |
!! | ATTGTAATGGGTGGTGTTCT+TGG | + | chr7.4:9820218-9820237 | MS.gene018518:CDS | 40.0% |
!! | GGTTTCTGTGCTATTTGCAA+CGG | + | chr7.4:9819881-9819900 | MS.gene018518:CDS | 40.0% |
!! | TCTTGATTAGCTCTGGATCA+TGG | - | chr7.4:9818967-9818986 | None:intergenic | 40.0% |
AAAACGACCTTTCTCAGCTG+CGG | - | chr7.4:9818495-9818514 | None:intergenic | 45.0% | |
AAGTTGCTTCTTGCTGCTGA+TGG | + | chr7.4:9819256-9819275 | MS.gene018518:CDS | 45.0% | |
ACTTCATTTATCTGCACGCC+AGG | + | chr7.4:9819114-9819133 | MS.gene018518:CDS | 45.0% | |
CAAAACACCTCTTGACCTTG+CGG | + | chr7.4:9819611-9819630 | MS.gene018518:CDS | 45.0% | |
CAAAGGGGTTAACTGTGAAG+TGG | + | chr7.4:9819231-9819250 | MS.gene018518:CDS | 45.0% | |
CAATGATCTCAACCAGCCAA+GGG | + | chr7.4:9819704-9819723 | MS.gene018518:CDS | 45.0% | |
CATTATCATGATCCCCACCA+GGG | - | chr7.4:9819932-9819951 | None:intergenic | 45.0% | |
CTCCCTTATACCACCAAAGA+AGG | + | chr7.4:9818533-9818552 | MS.gene018518:CDS | 45.0% | |
CTGGTGGGGATCATGATAAT+GGG | + | chr7.4:9819931-9819950 | MS.gene018518:CDS | 45.0% | |
CTTCATTTATCTGCACGCCA+GGG | + | chr7.4:9819115-9819134 | MS.gene018518:CDS | 45.0% | |
GAATGTGAATGGGATTGCCA+AGG | + | chr7.4:9819803-9819822 | MS.gene018518:CDS | 45.0% | |
GCAATGGATCAAAACCAGAG+CGG | - | chr7.4:9818574-9818593 | None:intergenic | 45.0% | |
GCAGCAAATCAAGGTCACAA+AGG | + | chr7.4:9818599-9818618 | MS.gene018518:CDS | 45.0% | |
GCAGTATTGCCAAACTTGTC+AGG | - | chr7.4:9819298-9819317 | None:intergenic | 45.0% | |
GCCAGAATTGGAAATGACGA+GGG | - | chr7.4:9818228-9818247 | None:intergenic | 45.0% | |
GCTCGAAGGACTGATAAGAA+AGG | + | chr7.4:9819184-9819203 | MS.gene018518:CDS | 45.0% | |
GGAAATGACGAGGGATTTGT+TGG | - | chr7.4:9818219-9818238 | None:intergenic | 45.0% | |
GGGAGATAAAGTCTGAGAGA+AGG | + | chr7.4:9820063-9820082 | MS.gene018518:CDS | 45.0% | |
GTCATGCTTCCTGACAAGTT+TGG | + | chr7.4:9819286-9819305 | MS.gene018518:CDS | 45.0% | |
GTTGGAGTTGGAGACAAGAA+GGG | - | chr7.4:9818201-9818220 | None:intergenic | 45.0% | |
GTTGTAGGGGGGATTGTAAT+GGG | + | chr7.4:9820206-9820225 | MS.gene018518:CDS | 45.0% | |
TCCCTCGTCATTTCCAATTC+TGG | + | chr7.4:9818224-9818243 | MS.gene018518:CDS | 45.0% | |
TCCTTGTTACTGTTGTAGGG+GGG | + | chr7.4:9820195-9820214 | MS.gene018518:CDS | 45.0% | |
TGCAACTCCTCTTGTATCTG+CGG | + | chr7.4:9819003-9819022 | MS.gene018518:CDS | 45.0% | |
TGCCAGAATTGGAAATGACG+AGG | - | chr7.4:9818229-9818248 | None:intergenic | 45.0% | |
TGCCGCTGTTAGGAATATTC+TGG | + | chr7.4:9818349-9818368 | MS.gene018518:CDS | 45.0% | |
TGCTACCAACTCTGTAACTG+TGG | + | chr7.4:9819860-9819879 | MS.gene018518:CDS | 45.0% | |
TGTTGGAGTTGGAGACAAGA+AGG | - | chr7.4:9818202-9818221 | None:intergenic | 45.0% | |
TGTTGTAGGGGGGATTGTAA+TGG | + | chr7.4:9820205-9820224 | MS.gene018518:CDS | 45.0% | |
TTGTATCTGCGGCTACAAGA+GGG | + | chr7.4:9819014-9819033 | MS.gene018518:CDS | 45.0% | |
! | CTTTTTACCGCAGCTGAGAA+AGG | + | chr7.4:9818485-9818504 | MS.gene018518:CDS | 45.0% |
! | GTGTTTTGTGGTCTCTTGTG+AGG | - | chr7.4:9819599-9819618 | None:intergenic | 45.0% |
! | TTTCACTTCATTGGCTGTGG+TGG | + | chr7.4:9820016-9820035 | MS.gene018518:CDS | 45.0% |
!! | ATATTGGAAGTGCTTCCGCA+AGG | - | chr7.4:9819629-9819648 | None:intergenic | 45.0% |
!! | TGATAATGGGATGGCTGTGA+TGG | + | chr7.4:9819944-9819963 | MS.gene018518:CDS | 45.0% |
!! | TGGGGATCATGATAATGGGA+TGG | + | chr7.4:9819935-9819954 | MS.gene018518:CDS | 45.0% |
!!! | CAAGGTCAAGAGGTGTTTTG+TGG | - | chr7.4:9819611-9819630 | None:intergenic | 45.0% |
ACAAACGCCGCTTCATATGG+CGG | + | chr7.4:9819207-9819226 | MS.gene018518:CDS | 50.0% | |
ACCCTATTCCTCTCCACTTC+CGG | + | chr7.4:9818170-9818189 | MS.gene018518:CDS | 50.0% | |
AGAGGAATAGGGTGGGTCTA+GGG | - | chr7.4:9818163-9818182 | None:intergenic | 50.0% | |
AGGACAAACGCCGCTTCATA+TGG | + | chr7.4:9819204-9819223 | MS.gene018518:CDS | 50.0% | |
ATGTAGCCACCAGGAAGAAG+AGG | + | chr7.4:9819323-9819342 | MS.gene018518:CDS | 50.0% | |
CCAATGATCTCAACCAGCCA+AGG | + | chr7.4:9819703-9819722 | MS.gene018518:CDS | 50.0% | |
CCATTATCATGATCCCCACC+AGG | - | chr7.4:9819933-9819952 | None:intergenic | 50.0% | |
CCTGGTGGGGATCATGATAA+TGG | + | chr7.4:9819930-9819949 | MS.gene018518:CDS | 50.0% | |
CCTTTGACCGCCATATGAAG+CGG | - | chr7.4:9819217-9819236 | None:intergenic | 50.0% | |
CGCTTCATATGGCGGTCAAA+GGG | + | chr7.4:9819215-9819234 | MS.gene018518:CDS | 50.0% | |
CTCAGCTGCGGTAAAAAGTG+CGG | - | chr7.4:9818483-9818502 | None:intergenic | 50.0% | |
CTTGTAGCCGCAGATACAAG+AGG | - | chr7.4:9819013-9819032 | None:intergenic | 50.0% | |
CTTGTATCTGCGGCTACAAG+AGG | + | chr7.4:9819013-9819032 | MS.gene018518:CDS | 50.0% | |
GAAGTGGAGAGGAATAGGGT+GGG | - | chr7.4:9818170-9818189 | None:intergenic | 50.0% | |
GCTTCATATGGCGGTCAAAG+GGG | + | chr7.4:9819216-9819235 | MS.gene018518:CDS | 50.0% | |
GTCTGAGAGAAGGGTTACAG+AGG | + | chr7.4:9820073-9820092 | MS.gene018518:CDS | 50.0% | |
TAACAAGGATTGCAGCCCAC+AGG | - | chr7.4:9820184-9820203 | None:intergenic | 50.0% | |
TACCTCTACCCTCTTCTTCC+TGG | - | chr7.4:9819335-9819354 | None:intergenic | 50.0% | |
TCCCCCCTACAACAGTAACA+AGG | - | chr7.4:9820199-9820218 | None:intergenic | 50.0% | |
TGTAGCCACCAGGAAGAAGA+GGG | + | chr7.4:9819324-9819343 | MS.gene018518:CDS | 50.0% | |
TTGCGCAGCAAGATGAAGCT+CGG | - | chr7.4:9818318-9818337 | None:intergenic | 50.0% | |
! | ACTTTTCACAGTCCCTGGTG+GGG | + | chr7.4:9819917-9819936 | MS.gene018518:CDS | 50.0% |
! | CAAATGATGGGAACGCTCAG+TGG | + | chr7.4:9818386-9818405 | MS.gene018518:CDS | 50.0% |
! | CACTTTTCACAGTCCCTGGT+GGG | + | chr7.4:9819916-9819935 | MS.gene018518:CDS | 50.0% |
! | CCTTGGCTGGTTGAGATCAT+TGG | - | chr7.4:9819706-9819725 | None:intergenic | 50.0% |
!! | CTCGGTGTCATTATGACGAC+CGG | - | chr7.4:9818300-9818319 | None:intergenic | 50.0% |
!! | GACGAGGGATTTGTTGGAGT+TGG | - | chr7.4:9818213-9818232 | None:intergenic | 50.0% |
!! | TCTTGTGAGGGCATTCGCAT+TGG | - | chr7.4:9819586-9819605 | None:intergenic | 50.0% |
AAGAAGGGCTTTGCCGGAAG+TGG | - | chr7.4:9818186-9818205 | None:intergenic | 55.0% | |
AGTGCTTCCGCAAGGTCAAG+AGG | - | chr7.4:9819621-9819640 | None:intergenic | 55.0% | |
CACCAGGAAGAAGAGGGTAG+AGG | + | chr7.4:9819330-9819349 | MS.gene018518:CDS | 55.0% | |
CCAAACGTCACCGAAGAGTG+AGG | + | chr7.4:9820267-9820286 | MS.gene018518:CDS | 55.0% | |
CCGCTTCATATGGCGGTCAA+AGG | + | chr7.4:9819214-9819233 | MS.gene018518:CDS | 55.0% | |
CCTCACTCTTCGGTGACGTT+TGG | - | chr7.4:9820270-9820289 | None:intergenic | 55.0% | |
CTCTACCCTCTTCTTCCTGG+TGG | - | chr7.4:9819332-9819351 | None:intergenic | 55.0% | |
CTGCATTGCATGTAGCCACC+AGG | + | chr7.4:9819314-9819333 | MS.gene018518:CDS | 55.0% | |
CTTCATCTTGCTGCGCAACG+CGG | + | chr7.4:9818320-9818339 | MS.gene018518:CDS | 55.0% | |
GAGAGGAATAGGGTGGGTCT+AGG | - | chr7.4:9818164-9818183 | None:intergenic | 55.0% | |
GAGGAATAGGGTGGGTCTAG+GGG | - | chr7.4:9818162-9818181 | None:intergenic | 55.0% | |
GCCGGAAGTGGAGAGGAATA+GGG | - | chr7.4:9818174-9818193 | None:intergenic | 55.0% | |
GGAAGTGGAGAGGAATAGGG+TGG | - | chr7.4:9818171-9818190 | None:intergenic | 55.0% | |
GGAGACAAGAAGGGCTTTGC+CGG | - | chr7.4:9818192-9818211 | None:intergenic | 55.0% | |
TCAGTCCTTCGAGCAAGCTG+CGG | - | chr7.4:9819178-9819197 | None:intergenic | 55.0% | |
TGCCGGAAGTGGAGAGGAAT+AGG | - | chr7.4:9818175-9818194 | None:intergenic | 55.0% | |
! | AGGGCATTCGCATTGGTGTC+GGG | - | chr7.4:9819579-9819598 | None:intergenic | 55.0% |
! | CACTTCATTGGCTGTGGTGG+TGG | + | chr7.4:9820019-9820038 | MS.gene018518:CDS | 55.0% |
! | GACGAGGCGTTTGCCAGAAT+TGG | - | chr7.4:9818240-9818259 | None:intergenic | 55.0% |
! | GCACTTTTCACAGTCCCTGG+TGG | + | chr7.4:9819915-9819934 | MS.gene018518:CDS | 55.0% |
! | GCAGCACTTTTCACAGTCCC+TGG | + | chr7.4:9819912-9819931 | MS.gene018518:CDS | 55.0% |
! | GTAGGGGGGATTGTAATGGG+TGG | + | chr7.4:9820209-9820228 | MS.gene018518:CDS | 55.0% |
! | GTTTTCCTCAGCTCGTCCCT+TGG | - | chr7.4:9819723-9819742 | None:intergenic | 55.0% |
! | TGCGGCTACAAGAGGGCATA+CGG | + | chr7.4:9819021-9819040 | MS.gene018518:CDS | 55.0% |
!! | GAGGGCATTCGCATTGGTGT+CGG | - | chr7.4:9819580-9819599 | None:intergenic | 55.0% |
AGTTGGTCGACGCAGCCTGT+GGG | + | chr7.4:9820166-9820185 | MS.gene018518:CDS | 60.0% | |
CAGTCCTTCGAGCAAGCTGC+GGG | - | chr7.4:9819177-9819196 | None:intergenic | 60.0% | |
CTGCGCAAGTTGCACAGAGC+AGG | + | chr7.4:9819828-9819847 | MS.gene018518:CDS | 60.0% | |
GAATAGGGTGGGTCTAGGGG+TGG | - | chr7.4:9818159-9818178 | None:intergenic | 60.0% | |
GTGCAACTTGCGCAGCTCCT+TGG | - | chr7.4:9819823-9819842 | None:intergenic | 60.0% | |
TAGTTGGTCGACGCAGCCTG+TGG | + | chr7.4:9820165-9820184 | MS.gene018518:CDS | 60.0% | |
TCTAGGGGTGGTTGGGGTGT+TGG | - | chr7.4:9818147-9818166 | None:intergenic | 60.0% | |
TCTTGCTGGGTGTCTCGACG+AGG | - | chr7.4:9818256-9818275 | None:intergenic | 60.0% | |
TGGGTTCGGAAAGAGGAGCG+TGG | - | chr7.4:9818127-9818146 | None:intergenic | 60.0% | |
! | CTAGGGGTGGTTGGGGTGTT+GGG | - | chr7.4:9818146-9818165 | None:intergenic | 60.0% |
! | TTCGGAAAGAGGAGCGTGGC+CGG | - | chr7.4:9818123-9818142 | None:intergenic | 60.0% |
!! | GGGGTGTTGGGTTCGGAAAG+AGG | - | chr7.4:9818134-9818153 | None:intergenic | 60.0% |
!! | GGTGGTTGGGGTGTTGGGTT+CGG | - | chr7.4:9818141-9818160 | None:intergenic | 60.0% |
ACCAGCCAAGGGACGAGCTG+AGG | + | chr7.4:9819715-9819734 | MS.gene018518:CDS | 65.0% | |
AGGGTGGGTCTAGGGGTGGT+TGG | - | chr7.4:9818155-9818174 | None:intergenic | 65.0% | |
GCGGTGATGCTGCCGCTGTT+AGG | + | chr7.4:9818339-9818358 | MS.gene018518:CDS | 65.0% | |
GGGCTTTGCCGGAAGTGGAG+AGG | - | chr7.4:9818181-9818200 | None:intergenic | 65.0% | |
GGGTGGGTCTAGGGGTGGTT+GGG | - | chr7.4:9818154-9818173 | None:intergenic | 65.0% | |
GGTGGGTCTAGGGGTGGTTG+GGG | - | chr7.4:9818153-9818172 | None:intergenic | 65.0% | |
TCCTCAGCTCGTCCCTTGGC+TGG | - | chr7.4:9819719-9819738 | None:intergenic | 65.0% | |
! | AGGACCCGCAGCTTGCTCGA+AGG | + | chr7.4:9819170-9819189 | MS.gene018518:CDS | 65.0% |
! | AAAGAGGAGCGTGGCCGGCG+GGG | - | chr7.4:9818118-9818137 | None:intergenic | 70.0% |
! | GAAAGAGGAGCGTGGCCGGC+GGG | - | chr7.4:9818119-9818138 | None:intergenic | 70.0% |
! | GGAAAGAGGAGCGTGGCCGG+CGG | - | chr7.4:9818120-9818139 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 9818107 | 9820376 | 9818107 | ID=MS.gene018518 |
chr7.4 | mRNA | 9818107 | 9820376 | 9818107 | ID=MS.gene018518.t1;Parent=MS.gene018518 |
chr7.4 | exon | 9818107 | 9818620 | 9818107 | ID=MS.gene018518.t1.exon1;Parent=MS.gene018518.t1 |
chr7.4 | CDS | 9818107 | 9818620 | 9818107 | ID=cds.MS.gene018518.t1;Parent=MS.gene018518.t1 |
chr7.4 | exon | 9818942 | 9819351 | 9818942 | ID=MS.gene018518.t1.exon2;Parent=MS.gene018518.t1 |
chr7.4 | CDS | 9818942 | 9819351 | 9818942 | ID=cds.MS.gene018518.t1;Parent=MS.gene018518.t1 |
chr7.4 | exon | 9819552 | 9820376 | 9819552 | ID=MS.gene018518.t1.exon3;Parent=MS.gene018518.t1 |
chr7.4 | CDS | 9819552 | 9820376 | 9819552 | ID=cds.MS.gene018518.t1;Parent=MS.gene018518.t1 |
Gene Sequence |
Protein sequence |