Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73864.t1 | XP_003607601.1 | 96.8 | 433 | 12 | 1 | 1 | 433 | 12 | 442 | 3.50E-232 | 813.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73864.t1 | Q9SJI7 | 60.6 | 411 | 155 | 3 | 22 | 431 | 7 | 411 | 1.7e-142 | 507.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73864.t1 | G7JCM9 | 96.8 | 433 | 12 | 1 | 1 | 433 | 12 | 442 | 2.5e-232 | 813.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049297 | MS.gene73864 | 0.82135 | 4.23E-53 | -1.69E-46 |
| MS.gene050301 | MS.gene73864 | 0.823009 | 1.74E-53 | -1.69E-46 |
| MS.gene050330 | MS.gene73864 | -0.816129 | 6.48E-52 | -1.69E-46 |
| MS.gene050558 | MS.gene73864 | 0.814039 | 1.89E-51 | -1.69E-46 |
| MS.gene051171 | MS.gene73864 | 0.818773 | 1.65E-52 | -1.69E-46 |
| MS.gene051240 | MS.gene73864 | 0.838352 | 3.03E-57 | -1.69E-46 |
| MS.gene051242 | MS.gene73864 | 0.822992 | 1.76E-53 | -1.69E-46 |
| MS.gene051582 | MS.gene73864 | 0.812172 | 4.85E-51 | -1.69E-46 |
| MS.gene052176 | MS.gene73864 | 0.810699 | 1.01E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene73864 | -0.802023 | 6.83E-49 | -1.69E-46 |
| MS.gene052600 | MS.gene73864 | 0.807729 | 4.38E-50 | -1.69E-46 |
| MS.gene053836 | MS.gene73864 | 0.836451 | 9.29E-57 | -1.69E-46 |
| MS.gene053971 | MS.gene73864 | 0.808971 | 2.38E-50 | -1.69E-46 |
| MS.gene054473 | MS.gene73864 | 0.840811 | 6.94E-58 | -1.69E-46 |
| MS.gene054942 | MS.gene73864 | 0.815342 | 9.71E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene73864 | 0.84263 | 2.30E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene73864 | 0.86121 | 1.20E-63 | -1.69E-46 |
| MS.gene056772 | MS.gene73864 | 0.806746 | 7.08E-50 | -1.69E-46 |
| MS.gene05702 | MS.gene73864 | 0.803558 | 3.29E-49 | -1.69E-46 |
| MS.gene057121 | MS.gene73864 | 0.82185 | 3.24E-53 | -1.69E-46 |
| MS.gene058002 | MS.gene73864 | 0.813341 | 2.69E-51 | -1.69E-46 |
| MS.gene058142 | MS.gene73864 | 0.80926 | 2.07E-50 | -1.69E-46 |
| MS.gene058233 | MS.gene73864 | 0.810177 | 1.31E-50 | -1.69E-46 |
| MS.gene058276 | MS.gene73864 | 0.820827 | 5.58E-53 | -1.69E-46 |
| MS.gene058833 | MS.gene73864 | 0.814333 | 1.62E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene73864 | 0.818317 | 2.09E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73864.t1 | MTR_4g080100 | 96.305 | 433 | 14 | 1 | 1 | 433 | 12 | 442 | 0.0 | 860 |
| MS.gene73864.t1 | MTR_2g015690 | 46.552 | 406 | 182 | 5 | 23 | 418 | 24 | 404 | 6.10e-124 | 366 |
| MS.gene73864.t1 | MTR_4g087810 | 40.146 | 411 | 200 | 8 | 21 | 418 | 15 | 392 | 3.79e-95 | 292 |
| MS.gene73864.t1 | MTR_4g087830 | 39.461 | 408 | 205 | 6 | 22 | 418 | 7 | 383 | 1.08e-94 | 290 |
| MS.gene73864.t1 | MTR_4g077070 | 36.343 | 432 | 214 | 10 | 21 | 424 | 102 | 500 | 1.20e-85 | 271 |
| MS.gene73864.t1 | MTR_7g096120 | 35.047 | 428 | 225 | 6 | 20 | 421 | 75 | 475 | 1.09e-82 | 263 |
| MS.gene73864.t1 | MTR_7g096140 | 34.314 | 408 | 217 | 6 | 20 | 402 | 75 | 456 | 8.23e-76 | 244 |
| MS.gene73864.t1 | MTR_7g006400 | 35.870 | 368 | 165 | 13 | 23 | 364 | 109 | 431 | 2.03e-50 | 178 |
| MS.gene73864.t1 | MTR_5g013230 | 29.730 | 407 | 220 | 10 | 8 | 383 | 124 | 495 | 6.36e-49 | 175 |
| MS.gene73864.t1 | MTR_7g081620 | 32.126 | 414 | 213 | 12 | 13 | 384 | 63 | 450 | 2.35e-48 | 171 |
| MS.gene73864.t1 | MTR_7g081645 | 32.737 | 391 | 203 | 14 | 13 | 382 | 70 | 421 | 5.75e-45 | 162 |
| MS.gene73864.t1 | MTR_4g099510 | 31.105 | 389 | 199 | 9 | 23 | 383 | 133 | 480 | 1.12e-41 | 155 |
| MS.gene73864.t1 | MTR_1995s0010 | 31.174 | 247 | 120 | 5 | 143 | 364 | 1 | 222 | 7.28e-29 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene73864.t1 | AT2G42690 | 61.111 | 414 | 148 | 4 | 22 | 431 | 7 | 411 | 0.0 | 528 |
| MS.gene73864.t1 | AT4G18550 | 42.543 | 409 | 195 | 8 | 23 | 418 | 23 | 404 | 1.27e-105 | 319 |
| MS.gene73864.t1 | AT4G18550 | 42.543 | 409 | 195 | 8 | 23 | 418 | 40 | 421 | 2.32e-105 | 319 |
| MS.gene73864.t1 | AT1G06250 | 40.049 | 407 | 208 | 6 | 23 | 418 | 9 | 390 | 3.16e-95 | 293 |
| MS.gene73864.t1 | AT1G51440 | 37.327 | 434 | 208 | 11 | 20 | 419 | 88 | 491 | 2.62e-83 | 265 |
| MS.gene73864.t1 | AT2G30550 | 35.402 | 435 | 215 | 11 | 20 | 421 | 102 | 503 | 2.88e-81 | 260 |
| MS.gene73864.t1 | AT1G06800 | 36.512 | 430 | 214 | 12 | 20 | 419 | 86 | 486 | 9.86e-79 | 253 |
| MS.gene73864.t1 | AT1G30370 | 32.379 | 454 | 243 | 13 | 4 | 430 | 102 | 518 | 2.22e-71 | 234 |
| MS.gene73864.t1 | AT4G18550 | 40.468 | 299 | 142 | 6 | 23 | 310 | 40 | 313 | 3.88e-69 | 222 |
| MS.gene73864.t1 | AT1G06250 | 40.199 | 301 | 146 | 5 | 127 | 418 | 1 | 276 | 1.65e-65 | 212 |
| MS.gene73864.t1 | AT2G30550 | 34.383 | 381 | 184 | 11 | 20 | 367 | 102 | 449 | 3.70e-64 | 213 |
| MS.gene73864.t1 | AT1G06800 | 35.544 | 377 | 184 | 12 | 20 | 366 | 86 | 433 | 3.65e-62 | 207 |
| MS.gene73864.t1 | AT2G31690 | 32.880 | 368 | 186 | 9 | 21 | 364 | 90 | 420 | 1.98e-51 | 180 |
| MS.gene73864.t1 | AT1G05800 | 32.447 | 376 | 190 | 9 | 13 | 364 | 74 | 409 | 4.91e-48 | 171 |
| MS.gene73864.t1 | AT4G16820 | 31.186 | 388 | 199 | 11 | 23 | 382 | 131 | 478 | 2.60e-43 | 159 |
| MS.gene73864.t1 | AT2G44810 | 30.769 | 390 | 206 | 10 | 23 | 382 | 90 | 445 | 3.27e-41 | 152 |
| MS.gene73864.t1 | AT2G44810 | 31.169 | 385 | 201 | 11 | 28 | 382 | 5 | 355 | 1.02e-40 | 149 |
Find 117 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGTTTGTTCCATGTTTCT+TGG | 0.233840 | 4.2:+29966854 | None:intergenic |
| CATTATCCAGGGAAGTTATT+GGG | 0.257904 | 4.2:-29964948 | MS.gene73864:CDS |
| CCCGTTGCTGCATTTGTGTT+TGG | 0.261484 | 4.2:-29965068 | MS.gene73864:CDS |
| AACTCCTAGGCAACAACAAC+TGG | 0.269686 | 4.2:-29966837 | MS.gene73864:CDS |
| GTACCCTTATTATTCTTGTC+TGG | 0.276776 | 4.2:+29966358 | None:intergenic |
| GCCAACCCTTCATTACTTTA+GGG | 0.284383 | 4.2:+29965291 | None:intergenic |
| CCTCCCAGACAAGAATAATA+AGG | 0.286496 | 4.2:-29966362 | MS.gene73864:CDS |
| ACATTATCCAGGGAAGTTAT+TGG | 0.290351 | 4.2:-29964949 | MS.gene73864:CDS |
| AGCCAACCCTTCATTACTTT+AGG | 0.309054 | 4.2:+29965290 | None:intergenic |
| CCGTTGCTGCATTTGTGTTT+GGG | 0.335466 | 4.2:-29965067 | MS.gene73864:CDS |
| CTGGTTGGAATGGGAGTGAT+GGG | 0.360921 | 4.2:-29964812 | MS.gene73864:CDS |
| GGAACAAAGCTTTCAATGAT+AGG | 0.361448 | 4.2:-29965031 | MS.gene73864:CDS |
| GTTTCTTGGTTTATTGTTGT+TGG | 0.361744 | 4.2:+29966868 | None:intergenic |
| GGTGAAGGTGAAGAGGAGTT+TGG | 0.362136 | 4.2:-29964781 | MS.gene73864:CDS |
| TGGTGGGTTGCGACGAATAA+AGG | 0.365880 | 4.2:-29964702 | MS.gene73864:CDS |
| GTTGGGACCGTGAGTCTAAC+TGG | 0.369388 | 4.2:-29966555 | MS.gene73864:CDS |
| ACAGGCAGGTCCTCCTTCTC+TGG | 0.374799 | 4.2:+29964642 | None:intergenic |
| GAGGTCTAGTGGGTTTAGTA+AGG | 0.379673 | 4.2:+29966810 | None:intergenic |
| CTCACTTTCACGTGAGAGTT+GGG | 0.381537 | 4.2:-29966572 | MS.gene73864:CDS |
| AACCGCAGTAGATAGAGTTT+TGG | 0.382882 | 4.2:+29966719 | None:intergenic |
| TACCCTTATTATTCTTGTCT+GGG | 0.392329 | 4.2:+29966359 | None:intergenic |
| CATGACTTTGTTCAAGAATG+AGG | 0.403587 | 4.2:+29966678 | None:intergenic |
| GCTGGTTGGAATGGGAGTGA+TGG | 0.408221 | 4.2:-29964813 | MS.gene73864:CDS |
| TGGGAGTGATGGGGAGTTTG+AGG | 0.408734 | 4.2:-29964802 | MS.gene73864:CDS |
| GCGTAGGGAGGATGGGGAAT+GGG | 0.409917 | 4.2:-29964673 | MS.gene73864:CDS |
| ATACAGAGTCAATACTCTTC+AGG | 0.411989 | 4.2:+29964618 | None:intergenic |
| TGGTTTATTGTTGTTGGTTG+TGG | 0.412592 | 4.2:+29966874 | None:intergenic |
| GTATGGTGCGTAGGGAGGAT+GGG | 0.417927 | 4.2:-29964680 | MS.gene73864:CDS |
| GGTATGGTGCGTAGGGAGGA+TGG | 0.422785 | 4.2:-29964681 | MS.gene73864:CDS |
| TGTTTGGGTCCCCACAAGTT+GGG | 0.424136 | 4.2:-29965052 | MS.gene73864:CDS |
| TTATTGGGGTATGAGTATAC+TGG | 0.426672 | 4.2:-29964933 | MS.gene73864:CDS |
| TTTCCCAGTTGTTGTTGCCT+AGG | 0.428181 | 4.2:+29966833 | None:intergenic |
| CATATTGTGGCTGGTTGGAA+TGG | 0.429515 | 4.2:-29964822 | MS.gene73864:CDS |
| TAAGTCTTGTGATTACTTGA+AGG | 0.431881 | 4.2:-29964748 | MS.gene73864:CDS |
| AATCCAAGTGTGGTATTAGT+AGG | 0.433511 | 4.2:-29965161 | MS.gene73864:CDS |
| TACTGCGGTTCAAGCCGTTA+TGG | 0.436707 | 4.2:-29966706 | MS.gene73864:CDS |
| CCAAACACAAATGCAGCAAC+GGG | 0.442597 | 4.2:+29965068 | None:intergenic |
| GATCTTATACCACATTATCC+AGG | 0.444039 | 4.2:-29964960 | MS.gene73864:CDS |
| GAGTGAAGAATAAAAGCTTC+AGG | 0.445100 | 4.2:+29966592 | None:intergenic |
| ATTCGAAGAATCCAAGTGAT+TGG | 0.456518 | 4.2:-29964866 | MS.gene73864:CDS |
| AACAAACTAGAAGCAGATTC+AGG | 0.459461 | 4.2:+29966412 | None:intergenic |
| TGCAAATTATGCCAATCACT+TGG | 0.462899 | 4.2:+29964855 | None:intergenic |
| GGATGAGGTTGCGGAGGTTG+AGG | 0.468903 | 4.2:+29966791 | None:intergenic |
| CTCCCAGACAAGAATAATAA+GGG | 0.473299 | 4.2:-29966361 | MS.gene73864:intron |
| CGAATAAAGGTATGGTGCGT+AGG | 0.476201 | 4.2:-29964689 | MS.gene73864:CDS |
| AAGCTTTGTTCCCAACTTGT+GGG | 0.484528 | 4.2:+29965042 | None:intergenic |
| TGCGTAGGGAGGATGGGGAA+TGG | 0.488524 | 4.2:-29964674 | MS.gene73864:CDS |
| AAAGCTTTGTTCCCAACTTG+TGG | 0.491555 | 4.2:+29965041 | None:intergenic |
| ACTCACTTTCACGTGAGAGT+TGG | 0.492991 | 4.2:-29966573 | MS.gene73864:CDS |
| CCCAAACACAAATGCAGCAA+CGG | 0.494417 | 4.2:+29965067 | None:intergenic |
| AGTGTCACGTGCCGGCGTCA+TGG | 0.494975 | 4.2:-29964722 | MS.gene73864:CDS |
| TTGTGTGGCGTGGTACTACT+AGG | 0.495241 | 4.2:-29966468 | MS.gene73864:CDS |
| AGTTTGAGGTGAAGGTGAAG+AGG | 0.496715 | 4.2:-29964788 | MS.gene73864:CDS |
| CTGGAGTGGATTAACGTGTT+TGG | 0.501745 | 4.2:-29966442 | MS.gene73864:CDS |
| GAGAGTCCCTAAAGTAATGA+AGG | 0.502197 | 4.2:-29965297 | MS.gene73864:CDS |
| TGATGGGGAGTTTGAGGTGA+AGG | 0.510458 | 4.2:-29964796 | MS.gene73864:CDS |
| TATGGTGCGTAGGGAGGATG+GGG | 0.510574 | 4.2:-29964679 | MS.gene73864:CDS |
| ATACACGTGCAGTAGCATAA+AGG | 0.511323 | 4.2:+29966620 | None:intergenic |
| CGATGAACGGAGTAGAGAGT+TGG | 0.517745 | 4.2:-29966509 | MS.gene73864:CDS |
| TCCCTAAAGTAATGAAGGGT+TGG | 0.517931 | 4.2:-29965292 | MS.gene73864:CDS |
| ATATTGTGGCTGGTTGGAAT+GGG | 0.519997 | 4.2:-29964821 | MS.gene73864:CDS |
| TTGCGGAGGTTGAGGTCTAG+TGG | 0.521697 | 4.2:+29966799 | None:intergenic |
| GCAAGCTATGTTGCATATTG+TGG | 0.523056 | 4.2:-29964835 | MS.gene73864:CDS |
| CAACTCTCTACTCCGTTCAT+CGG | 0.527868 | 4.2:+29966510 | None:intergenic |
| CACAACGGAGGATGAGGTTG+CGG | 0.530460 | 4.2:+29966782 | None:intergenic |
| GACCGTGAGTCTAACTGGAT+TGG | 0.532608 | 4.2:-29966550 | MS.gene73864:CDS |
| GCTATGTTGCATATTGTGGC+TGG | 0.532700 | 4.2:-29964831 | MS.gene73864:CDS |
| TCATACCCCAATAACTTCCC+TGG | 0.532892 | 4.2:+29964942 | None:intergenic |
| TGCGGAGGTTGAGGTCTAGT+GGG | 0.534596 | 4.2:+29966800 | None:intergenic |
| TTTATTGTTGTTGGTTGTGG+TGG | 0.538715 | 4.2:+29966877 | None:intergenic |
| GTCACGTGCCGGCGTCATGG+TGG | 0.539164 | 4.2:-29964719 | MS.gene73864:CDS |
| TGTTGCATATTGTGGCTGGT+TGG | 0.546285 | 4.2:-29964827 | MS.gene73864:CDS |
| ACACAACAGTGTAGTGTGTA+GGG | 0.546335 | 4.2:+29966647 | None:intergenic |
| CCTTATTATTCTTGTCTGGG+AGG | 0.547834 | 4.2:+29966362 | None:intergenic |
| GATGAACGGAGTAGAGAGTT+GGG | 0.549457 | 4.2:-29966508 | MS.gene73864:CDS |
| GAATAAAGGTATGGTGCGTA+GGG | 0.553192 | 4.2:-29964688 | MS.gene73864:CDS |
| ATGGGTTGATGCACCAGAGA+AGG | 0.557126 | 4.2:-29964655 | MS.gene73864:CDS |
| TCACGTGCCGGCGTCATGGT+GGG | 0.557826 | 4.2:-29964718 | MS.gene73864:CDS |
| GTGTTTGGGTCCCCACAAGT+TGG | 0.557854 | 4.2:-29965053 | MS.gene73864:CDS |
| CGCAACCTCATCCTCCGTTG+TGG | 0.560178 | 4.2:-29966781 | MS.gene73864:CDS |
| AATACTCTTCAGGCACAGGC+AGG | 0.565284 | 4.2:+29964628 | None:intergenic |
| ATCTTATACCACATTATCCA+GGG | 0.566732 | 4.2:-29964959 | MS.gene73864:CDS |
| ATTATCCAGGGAAGTTATTG+GGG | 0.567947 | 4.2:-29964947 | MS.gene73864:CDS |
| TGTCCTACTAATACCACACT+TGG | 0.573233 | 4.2:+29965158 | None:intergenic |
| AGTCACCACAACGGAGGATG+AGG | 0.574935 | 4.2:+29966776 | None:intergenic |
| GAAACATGGAACAAACTCCT+AGG | 0.575157 | 4.2:-29966850 | MS.gene73864:CDS |
| AATAACTTCCCTGGATAATG+TGG | 0.577975 | 4.2:+29964951 | None:intergenic |
| TATTGGGGTATGAGTATACT+GGG | 0.578108 | 4.2:-29964932 | MS.gene73864:CDS |
| TGAGTATACTGGGACAGAGT+TGG | 0.580146 | 4.2:-29964922 | MS.gene73864:CDS |
| TCGCTGTTAGTTCCGATGAA+CGG | 0.581063 | 4.2:-29966522 | MS.gene73864:CDS |
| GTCGTTGTTGAAGGAATCGT+AGG | 0.582102 | 4.2:+29966741 | None:intergenic |
| AGCTTTGTTCCCAACTTGTG+GGG | 0.583051 | 4.2:+29965043 | None:intergenic |
| TGGTTGGAATGGGAGTGATG+GGG | 0.584414 | 4.2:-29964811 | MS.gene73864:CDS |
| CAACAATAAACCAAGAAACA+TGG | 0.587322 | 4.2:-29966864 | MS.gene73864:CDS |
| GAAGGAAGAGTGTCACGTGC+CGG | 0.589437 | 4.2:-29964730 | MS.gene73864:CDS |
| TAGCAGCAGCAGTGATGATG+AGG | 0.591028 | 4.2:-29965327 | MS.gene73864:CDS |
| GTCGCAACCCACCATGACGC+CGG | 0.606178 | 4.2:+29964711 | None:intergenic |
| TAAAGGTATGGTGCGTAGGG+AGG | 0.609458 | 4.2:-29964685 | MS.gene73864:CDS |
| AGTCAATACTCTTCAGGCAC+AGG | 0.610040 | 4.2:+29964624 | None:intergenic |
| GGTTGATGCACCAGAGAAGG+AGG | 0.611115 | 4.2:-29964652 | MS.gene73864:CDS |
| GGTTGCGACGAATAAAGGTA+TGG | 0.611496 | 4.2:-29964697 | MS.gene73864:CDS |
| GCGTGGTACTACTAGGGACC+TGG | 0.616633 | 4.2:-29966461 | MS.gene73864:CDS |
| GACACAACAGTGTAGTGTGT+AGG | 0.616775 | 4.2:+29966646 | None:intergenic |
| AACGGAGGATGAGGTTGCGG+AGG | 0.617333 | 4.2:+29966785 | None:intergenic |
| ACTCCTAGGCAACAACAACT+GGG | 0.618469 | 4.2:-29966836 | MS.gene73864:CDS |
| AGAGTCCCTAAAGTAATGAA+GGG | 0.626570 | 4.2:-29965296 | MS.gene73864:CDS |
| CAAACACGTTAATCCACTCC+AGG | 0.633191 | 4.2:+29966443 | None:intergenic |
| CAAGAATGAAAATCCAAGTG+TGG | 0.634400 | 4.2:-29965171 | MS.gene73864:CDS |
| GTATTAGTAGGACATAGTCT+AGG | 0.639227 | 4.2:-29965149 | MS.gene73864:CDS |
| GTCGTGAAATATATGTTGTG+TGG | 0.660451 | 4.2:-29966483 | MS.gene73864:CDS |
| AACCAATCCAGTTAGACTCA+CGG | 0.662669 | 4.2:+29966548 | None:intergenic |
| GAAATATATGTTGTGTGGCG+TGG | 0.672854 | 4.2:-29966478 | MS.gene73864:CDS |
| GTACTACTAGGGACCTGGAG+TGG | 0.677827 | 4.2:-29966456 | MS.gene73864:CDS |
| TGTGTGGCGTGGTACTACTA+GGG | 0.683087 | 4.2:-29966467 | MS.gene73864:CDS |
| TTTGTATGAAGTCACCACAA+CGG | 0.704168 | 4.2:+29966767 | None:intergenic |
| GACCAAAACTCTATCTACTG+CGG | 0.719453 | 4.2:-29966721 | MS.gene73864:CDS |
| GTATGAAGTCACCACAACGG+AGG | 0.734924 | 4.2:+29966770 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTAACTTGATATTTATTTAA+GGG | + | chr4.2:29965629-29965648 | None:intergenic | 15.0% |
| !!! | AATCAAATTTTAAAACTGAT+GGG | + | chr4.2:29965791-29965810 | None:intergenic | 15.0% |
| !! | CAAAAAGTTTCAAAATTTGA+AGG | - | chr4.2:29966530-29966549 | MS.gene73864:CDS | 20.0% |
| !! | GGTAACTTGATATTTATTTA+AGG | + | chr4.2:29965630-29965649 | None:intergenic | 20.0% |
| !! | GTAAATATAACTCATTAACA+TGG | - | chr4.2:29965501-29965520 | MS.gene73864:intron | 20.0% |
| !! | GTTTATGTAAGATCTAAAAA+TGG | + | chr4.2:29965242-29965261 | None:intergenic | 20.0% |
| !!! | ATAAAAATTTAACTGACTCT+AGG | - | chr4.2:29965699-29965718 | MS.gene73864:intron | 20.0% |
| !!! | GAATCAAATTTTAAAACTGA+TGG | + | chr4.2:29965792-29965811 | None:intergenic | 20.0% |
| ! | CATATATTTGTTCATATGCA+CGG | + | chr4.2:29965591-29965610 | None:intergenic | 25.0% |
| ! | CGTTACATAGACTTTATAAA+TGG | + | chr4.2:29966145-29966164 | None:intergenic | 25.0% |
| ! | GTTAATTAAATGATGTCAAG+AGG | - | chr4.2:29965739-29965758 | MS.gene73864:intron | 25.0% |
| ! | TGTAAGATCTAAAAATGGAT+AGG | + | chr4.2:29965237-29965256 | None:intergenic | 25.0% |
| ! | TGTCACATAGACTTTATAAA+TGG | + | chr4.2:29966104-29966123 | None:intergenic | 25.0% |
| !! | AAGAATTCCTTCTATTTTCT+GGG | + | chr4.2:29965915-29965934 | None:intergenic | 25.0% |
| !! | TTTTTGTGAAAGGAGATTTT+GGG | + | chr4.2:29966293-29966312 | None:intergenic | 25.0% |
| AAAGTCTATGTGACATGTAT+TGG | - | chr4.2:29966109-29966128 | MS.gene73864:intron | 30.0% | |
| AGAAATATTCTCTGCAAATG+TGG | - | chr4.2:29965654-29965673 | MS.gene73864:intron | 30.0% | |
| ATCTTATACCACATTATCCA+GGG | - | chr4.2:29966577-29966596 | MS.gene73864:CDS | 30.0% | |
| CAACAATAAACCAAGAAACA+TGG | - | chr4.2:29964672-29964691 | MS.gene73864:CDS | 30.0% | |
| CAGAAAATAGAAGGAATTCT+TGG | - | chr4.2:29965914-29965933 | MS.gene73864:intron | 30.0% | |
| GAAATATTCTCTGCAAATGT+GGG | - | chr4.2:29965655-29965674 | MS.gene73864:intron | 30.0% | |
| GATTGAAACTCTGAACTAAA+AGG | + | chr4.2:29965562-29965581 | None:intergenic | 30.0% | |
| GTTTCTTGGTTTATTGTTGT+TGG | + | chr4.2:29964671-29964690 | None:intergenic | 30.0% | |
| TACCCTTATTATTCTTGTCT+GGG | + | chr4.2:29965180-29965199 | None:intergenic | 30.0% | |
| TTGCAGAGAATATTTCTTCA+AGG | + | chr4.2:29965651-29965670 | None:intergenic | 30.0% | |
| TTGTATGAGATTTAGAAGCA+TGG | - | chr4.2:29965287-29965306 | MS.gene73864:CDS | 30.0% | |
| ! | ATTTGAAGGTTTTACATGTG+AGG | - | chr4.2:29966544-29966563 | MS.gene73864:CDS | 30.0% |
| ! | CAAGAATTCCTTCTATTTTC+TGG | + | chr4.2:29965916-29965935 | None:intergenic | 30.0% |
| ! | GTTTTTGTGAAAGGAGATTT+TGG | + | chr4.2:29966294-29966313 | None:intergenic | 30.0% |
| ! | TAAGTCTTGTGATTACTTGA+AGG | - | chr4.2:29966788-29966807 | MS.gene73864:CDS | 30.0% |
| ! | TGCTTTTATGCATAACTCTT+CGG | - | chr4.2:29965955-29965974 | MS.gene73864:intron | 30.0% |
| ! | TTTAGAAGCATGGAATCTAT+AGG | - | chr4.2:29965297-29965316 | MS.gene73864:CDS | 30.0% |
| !! | AATTGTGAGTGCTTTTGATT+TGG | - | chr4.2:29966422-29966441 | MS.gene73864:CDS | 30.0% |
| AAACATACTTAAACCGAGTC+TGG | - | chr4.2:29965258-29965277 | MS.gene73864:CDS | 35.0% | |
| AACAAACTAGAAGCAGATTC+AGG | + | chr4.2:29965127-29965146 | None:intergenic | 35.0% | |
| AACATACTTAAACCGAGTCT+GGG | - | chr4.2:29965259-29965278 | MS.gene73864:CDS | 35.0% | |
| AATAACTTCCCTGGATAATG+TGG | + | chr4.2:29966588-29966607 | None:intergenic | 35.0% | |
| AATCCAAGTGTGGTATTAGT+AGG | - | chr4.2:29966375-29966394 | MS.gene73864:CDS | 35.0% | |
| ACATTATCCAGGGAAGTTAT+TGG | - | chr4.2:29966587-29966606 | MS.gene73864:CDS | 35.0% | |
| AGAGTCCCTAAAGTAATGAA+GGG | - | chr4.2:29966240-29966259 | MS.gene73864:intron | 35.0% | |
| ATTAACATGGTGTGACAGAA+GGG | - | chr4.2:29965514-29965533 | MS.gene73864:intron | 35.0% | |
| ATTATCCAGGGAAGTTATTG+GGG | - | chr4.2:29966589-29966608 | MS.gene73864:CDS | 35.0% | |
| ATTCGAAGAATCCAAGTGAT+TGG | - | chr4.2:29966670-29966689 | MS.gene73864:CDS | 35.0% | |
| CAAGAATGAAAATCCAAGTG+TGG | - | chr4.2:29966365-29966384 | MS.gene73864:CDS | 35.0% | |
| CATGACTTTGTTCAAGAATG+AGG | + | chr4.2:29964861-29964880 | None:intergenic | 35.0% | |
| CATTATCCAGGGAAGTTATT+GGG | - | chr4.2:29966588-29966607 | MS.gene73864:CDS | 35.0% | |
| CTCCCAGACAAGAATAATAA+GGG | - | chr4.2:29965175-29965194 | MS.gene73864:CDS | 35.0% | |
| GAGTGAAGAATAAAAGCTTC+AGG | + | chr4.2:29964947-29964966 | None:intergenic | 35.0% | |
| GATCTTATACCACATTATCC+AGG | - | chr4.2:29966576-29966595 | MS.gene73864:CDS | 35.0% | |
| GGAACAAAGCTTTCAATGAT+AGG | - | chr4.2:29966505-29966524 | MS.gene73864:CDS | 35.0% | |
| GTACCCTTATTATTCTTGTC+TGG | + | chr4.2:29965181-29965200 | None:intergenic | 35.0% | |
| GTATTAGTAGGACATAGTCT+AGG | - | chr4.2:29966387-29966406 | MS.gene73864:CDS | 35.0% | |
| GTCGTGAAATATATGTTGTG+TGG | - | chr4.2:29965053-29965072 | MS.gene73864:CDS | 35.0% | |
| TACTAGACTGACTACCATAT+TGG | - | chr4.2:29965850-29965869 | MS.gene73864:intron | 35.0% | |
| TAGTTCAGAGTTTCAATCTC+TGG | - | chr4.2:29965564-29965583 | MS.gene73864:intron | 35.0% | |
| TATTGGGGTATGAGTATACT+GGG | - | chr4.2:29966604-29966623 | MS.gene73864:CDS | 35.0% | |
| TGCAAATTATGCCAATCACT+TGG | + | chr4.2:29966684-29966703 | None:intergenic | 35.0% | |
| TGCTAAATCATAGGCACATT+GGG | - | chr4.2:29966039-29966058 | MS.gene73864:intron | 35.0% | |
| TTAAATGATGTCAAGAGGCA+TGG | - | chr4.2:29965744-29965763 | MS.gene73864:intron | 35.0% | |
| TTATTGGGGTATGAGTATAC+TGG | - | chr4.2:29966603-29966622 | MS.gene73864:CDS | 35.0% | |
| TTCCAAACCCAGAAAATAGA+AGG | - | chr4.2:29965905-29965924 | MS.gene73864:intron | 35.0% | |
| TTTGTATGAAGTCACCACAA+CGG | + | chr4.2:29964772-29964791 | None:intergenic | 35.0% | |
| ! | AATTCTTGGATTTTGCCTTG+GGG | - | chr4.2:29965928-29965947 | MS.gene73864:intron | 35.0% |
| ! | AGAATGAGGTTTTGCCATAA+CGG | + | chr4.2:29964847-29964866 | None:intergenic | 35.0% |
| ! | CTATGTGACATGTATTGGTA+AGG | - | chr4.2:29966114-29966133 | MS.gene73864:intron | 35.0% |
| ! | GAATTCTTGGATTTTGCCTT+GGG | - | chr4.2:29965927-29965946 | MS.gene73864:intron | 35.0% |
| ! | GCTTTTATGCATAACTCTTC+GGG | - | chr4.2:29965956-29965975 | MS.gene73864:intron | 35.0% |
| ! | TGGTTTATTGTTGTTGGTTG+TGG | + | chr4.2:29964665-29964684 | None:intergenic | 35.0% |
| ! | TTCCTTCTATTTTCTGGGTT+TGG | + | chr4.2:29965910-29965929 | None:intergenic | 35.0% |
| ! | TTTATTGTTGTTGGTTGTGG+TGG | + | chr4.2:29964662-29964681 | None:intergenic | 35.0% |
| AAAAACAAGCGTCAGAACAC+AGG | - | chr4.2:29966308-29966327 | MS.gene73864:intron | 40.0% | |
| AACCAATCCAGTTAGACTCA+CGG | + | chr4.2:29964991-29965010 | None:intergenic | 40.0% | |
| ACACAACAGTGTAGTGTGTA+GGG | + | chr4.2:29964892-29964911 | None:intergenic | 40.0% | |
| ACATACTTAAACCGAGTCTG+GGG | - | chr4.2:29965260-29965279 | MS.gene73864:CDS | 40.0% | |
| AGCCAACCCTTCATTACTTT+AGG | + | chr4.2:29966249-29966268 | None:intergenic | 40.0% | |
| ATACACGTGCAGTAGCATAA+AGG | + | chr4.2:29964919-29964938 | None:intergenic | 40.0% | |
| ATGGCATGAGTTCACCAATA+TGG | + | chr4.2:29965867-29965886 | None:intergenic | 40.0% | |
| CATTAACATGGTGTGACAGA+AGG | - | chr4.2:29965513-29965532 | MS.gene73864:intron | 40.0% | |
| CCTCCCAGACAAGAATAATA+AGG | - | chr4.2:29965174-29965193 | MS.gene73864:CDS | 40.0% | |
| CCTTATTATTCTTGTCTGGG+AGG | + | chr4.2:29965177-29965196 | None:intergenic | 40.0% | |
| GAAACATGGAACAAACTCCT+AGG | - | chr4.2:29964686-29964705 | MS.gene73864:CDS | 40.0% | |
| GAAATATATGTTGTGTGGCG+TGG | - | chr4.2:29965058-29965077 | MS.gene73864:CDS | 40.0% | |
| GACCAAAACTCTATCTACTG+CGG | - | chr4.2:29964815-29964834 | MS.gene73864:CDS | 40.0% | |
| GAGAGTCCCTAAAGTAATGA+AGG | - | chr4.2:29966239-29966258 | MS.gene73864:intron | 40.0% | |
| GCAAGCTATGTTGCATATTG+TGG | - | chr4.2:29966701-29966720 | MS.gene73864:CDS | 40.0% | |
| GCCAACCCTTCATTACTTTA+GGG | + | chr4.2:29966248-29966267 | None:intergenic | 40.0% | |
| GTGCTAAATCATAGGCACAT+TGG | - | chr4.2:29966038-29966057 | MS.gene73864:intron | 40.0% | |
| GTGTCACATTCGCATCTATA+TGG | + | chr4.2:29966082-29966101 | None:intergenic | 40.0% | |
| TCCCTAAAGTAATGAAGGGT+TGG | - | chr4.2:29966244-29966263 | MS.gene73864:intron | 40.0% | |
| TGTCCTACTAATACCACACT+TGG | + | chr4.2:29966381-29966400 | None:intergenic | 40.0% | |
| TTAACATGGTGTGACAGAAG+GGG | - | chr4.2:29965515-29965534 | MS.gene73864:intron | 40.0% | |
| ! | AACCGCAGTAGATAGAGTTT+TGG | + | chr4.2:29964820-29964839 | None:intergenic | 40.0% |
| ! | ATATTGTGGCTGGTTGGAAT+GGG | - | chr4.2:29966715-29966734 | MS.gene73864:CDS | 40.0% |
| ! | GAATAAAGGTATGGTGCGTA+GGG | - | chr4.2:29966848-29966867 | MS.gene73864:CDS | 40.0% |
| ! | GGAATTCTTGGATTTTGCCT+TGG | - | chr4.2:29965926-29965945 | MS.gene73864:intron | 40.0% |
| ! | GGAGTTTGTTCCATGTTTCT+TGG | + | chr4.2:29964685-29964704 | None:intergenic | 40.0% |
| !! | AAAGCTTTGTTCCCAACTTG+TGG | + | chr4.2:29966498-29966517 | None:intergenic | 40.0% |
| !! | AAGCTTTGTTCCCAACTTGT+GGG | + | chr4.2:29966497-29966516 | None:intergenic | 40.0% |
| !! | AGAGTTTTGGTCGTTGTTGA+AGG | + | chr4.2:29964807-29964826 | None:intergenic | 40.0% |
| !!! | CTGACGCTTGTTTTTGTGAA+AGG | + | chr4.2:29966303-29966322 | None:intergenic | 40.0% |
| !!! | GCTTTTGATTTGGTGGAGAA+TGG | - | chr4.2:29966432-29966451 | MS.gene73864:CDS | 40.0% |
| !!! | TGTGAGTGCTTTTGATTTGG+TGG | - | chr4.2:29966425-29966444 | MS.gene73864:CDS | 40.0% |
| AACTCCTAGGCAACAACAAC+TGG | - | chr4.2:29964699-29964718 | MS.gene73864:CDS | 45.0% | |
| ACACTAGCTAATAGTCCTCC+TGG | - | chr4.2:29966016-29966035 | MS.gene73864:intron | 45.0% | |
| ACTCACTTTCACGTGAGAGT+TGG | - | chr4.2:29964963-29964982 | MS.gene73864:CDS | 45.0% | |
| ACTCCTAGGCAACAACAACT+GGG | - | chr4.2:29964700-29964719 | MS.gene73864:CDS | 45.0% | |
| ATTGGTGAACTCATGCCATG+TGG | - | chr4.2:29965868-29965887 | MS.gene73864:intron | 45.0% | |
| CAAACACGTTAATCCACTCC+AGG | + | chr4.2:29965096-29965115 | None:intergenic | 45.0% | |
| CAACTCTCTACTCCGTTCAT+CGG | + | chr4.2:29965029-29965048 | None:intergenic | 45.0% | |
| CATACTTAAACCGAGTCTGG+GGG | - | chr4.2:29965261-29965280 | MS.gene73864:CDS | 45.0% | |
| CCAAACACAAATGCAGCAAC+GGG | + | chr4.2:29966471-29966490 | None:intergenic | 45.0% | |
| CCCAAACACAAATGCAGCAA+CGG | + | chr4.2:29966472-29966491 | None:intergenic | 45.0% | |
| CCGTTGCTGCATTTGTGTTT+GGG | - | chr4.2:29966469-29966488 | MS.gene73864:CDS | 45.0% | |
| CTCACTTTCACGTGAGAGTT+GGG | - | chr4.2:29964964-29964983 | MS.gene73864:CDS | 45.0% | |
| CTCATGCCATGTGGTGTATA+CGG | - | chr4.2:29965877-29965896 | MS.gene73864:intron | 45.0% | |
| GACACAACAGTGTAGTGTGT+AGG | + | chr4.2:29964893-29964912 | None:intergenic | 45.0% | |
| GACAGAAGGGGTAGATGTTT+GGG | - | chr4.2:29965527-29965546 | MS.gene73864:intron | 45.0% | |
| GATGAACGGAGTAGAGAGTT+GGG | - | chr4.2:29965028-29965047 | MS.gene73864:CDS | 45.0% | |
| GCTATGTTGCATATTGTGGC+TGG | - | chr4.2:29966705-29966724 | MS.gene73864:CDS | 45.0% | |
| GGTTGCGACGAATAAAGGTA+TGG | - | chr4.2:29966839-29966858 | MS.gene73864:CDS | 45.0% | |
| GTCGTTGTTGAAGGAATCGT+AGG | + | chr4.2:29964798-29964817 | None:intergenic | 45.0% | |
| TCATACCCCAATAACTTCCC+TGG | + | chr4.2:29966597-29966616 | None:intergenic | 45.0% | |
| TCGCTGTTAGTTCCGATGAA+CGG | - | chr4.2:29965014-29965033 | MS.gene73864:CDS | 45.0% | |
| TGACAGAAGGGGTAGATGTT+TGG | - | chr4.2:29965526-29965545 | MS.gene73864:intron | 45.0% | |
| TGAGTATACTGGGACAGAGT+TGG | - | chr4.2:29966614-29966633 | MS.gene73864:CDS | 45.0% | |
| TGTGCCTATGATTTAGCACC+AGG | + | chr4.2:29966037-29966056 | None:intergenic | 45.0% | |
| TGTTGCATATTGTGGCTGGT+TGG | - | chr4.2:29966709-29966728 | MS.gene73864:CDS | 45.0% | |
| ! | AGTTTGAGGTGAAGGTGAAG+AGG | - | chr4.2:29966748-29966767 | MS.gene73864:CDS | 45.0% |
| ! | CATATTGTGGCTGGTTGGAA+TGG | - | chr4.2:29966714-29966733 | MS.gene73864:CDS | 45.0% |
| ! | CGAATAAAGGTATGGTGCGT+AGG | - | chr4.2:29966847-29966866 | MS.gene73864:CDS | 45.0% |
| ! | TCCTCCTGGTGCTAAATCAT+AGG | - | chr4.2:29966030-29966049 | MS.gene73864:intron | 45.0% |
| ! | TTTCCCAGTTGTTGTTGCCT+AGG | + | chr4.2:29964706-29964725 | None:intergenic | 45.0% |
| !! | AAAGTGCCGTATACACCACA+TGG | + | chr4.2:29965886-29965905 | None:intergenic | 45.0% |
| !! | AGCTTTGTTCCCAACTTGTG+GGG | + | chr4.2:29966496-29966515 | None:intergenic | 45.0% |
| !! | CATAACTCTTCGGGTTGATC+TGG | - | chr4.2:29965965-29965984 | MS.gene73864:intron | 45.0% |
| !! | CTGGAGTGGATTAACGTGTT+TGG | - | chr4.2:29965094-29965113 | MS.gene73864:CDS | 45.0% |
| !! | GAGGTCTAGTGGGTTTAGTA+AGG | + | chr4.2:29964729-29964748 | None:intergenic | 45.0% |
| !! | GCATAAAAGCATTTGCCCCA+AGG | + | chr4.2:29965946-29965965 | None:intergenic | 45.0% |
| AATACTCTTCAGGCACAGGC+AGG | + | chr4.2:29966911-29966930 | None:intergenic | 50.0% | |
| CATACAAACTCCCCCAGACT+CGG | + | chr4.2:29965274-29965293 | None:intergenic | 50.0% | |
| CCCGTTGCTGCATTTGTGTT+TGG | - | chr4.2:29966468-29966487 | MS.gene73864:CDS | 50.0% | |
| CGATGAACGGAGTAGAGAGT+TGG | - | chr4.2:29965027-29965046 | MS.gene73864:CDS | 50.0% | |
| CTGGTTGGAATGGGAGTGAT+GGG | - | chr4.2:29966724-29966743 | MS.gene73864:CDS | 50.0% | |
| GACCGTGAGTCTAACTGGAT+TGG | - | chr4.2:29964986-29965005 | MS.gene73864:CDS | 50.0% | |
| GCCTATGATTTAGCACCAGG+AGG | + | chr4.2:29966034-29966053 | None:intergenic | 50.0% | |
| GGTGAAGGTGAAGAGGAGTT+TGG | - | chr4.2:29966755-29966774 | MS.gene73864:CDS | 50.0% | |
| GTATGAAGTCACCACAACGG+AGG | + | chr4.2:29964769-29964788 | None:intergenic | 50.0% | |
| TACTGCGGTTCAAGCCGTTA+TGG | - | chr4.2:29964830-29964849 | MS.gene73864:CDS | 50.0% | |
| TGGTTGGAATGGGAGTGATG+GGG | - | chr4.2:29966725-29966744 | MS.gene73864:CDS | 50.0% | |
| TGTGTGGCGTGGTACTACTA+GGG | - | chr4.2:29965069-29965088 | MS.gene73864:CDS | 50.0% | |
| TGTTTGGGTCCCCACAAGTT+GGG | - | chr4.2:29966484-29966503 | MS.gene73864:CDS | 50.0% | |
| TTGTGTGGCGTGGTACTACT+AGG | - | chr4.2:29965068-29965087 | MS.gene73864:CDS | 50.0% | |
| ! | AAGAGGCATGGCTAGGATGA+TGG | - | chr4.2:29965756-29965775 | MS.gene73864:intron | 50.0% |
| ! | TAAAGGTATGGTGCGTAGGG+AGG | - | chr4.2:29966851-29966870 | MS.gene73864:CDS | 50.0% |
| ! | TAGCAGCAGCAGTGATGATG+AGG | - | chr4.2:29966209-29966228 | MS.gene73864:intron | 50.0% |
| ! | TGATGGGGAGTTTGAGGTGA+AGG | - | chr4.2:29966740-29966759 | MS.gene73864:CDS | 50.0% |
| ! | TGATGTCAAGAGGCATGGCT+AGG | - | chr4.2:29965749-29965768 | MS.gene73864:intron | 50.0% |
| !! | AGGAGATTTTGGGTCGTCTG+AGG | + | chr4.2:29966283-29966302 | None:intergenic | 50.0% |
| !! | ATGGGTTGATGCACCAGAGA+AGG | - | chr4.2:29966881-29966900 | MS.gene73864:CDS | 50.0% |
| !! | TGGTGGGTTGCGACGAATAA+AGG | - | chr4.2:29966834-29966853 | MS.gene73864:CDS | 50.0% |
| AGTCACCACAACGGAGGATG+AGG | + | chr4.2:29964763-29964782 | None:intergenic | 55.0% | |
| CACAACGGAGGATGAGGTTG+CGG | + | chr4.2:29964757-29964776 | None:intergenic | 55.0% | |
| GCTGGTTGGAATGGGAGTGA+TGG | - | chr4.2:29966723-29966742 | MS.gene73864:CDS | 55.0% | |
| GTACTACTAGGGACCTGGAG+TGG | - | chr4.2:29965080-29965099 | MS.gene73864:CDS | 55.0% | |
| GTATGGTGCGTAGGGAGGAT+GGG | - | chr4.2:29966856-29966875 | MS.gene73864:CDS | 55.0% | |
| GTGTTTGGGTCCCCACAAGT+TGG | - | chr4.2:29966483-29966502 | MS.gene73864:CDS | 55.0% | |
| GTTGGGACCGTGAGTCTAAC+TGG | - | chr4.2:29964981-29965000 | MS.gene73864:CDS | 55.0% | |
| TATGGTGCGTAGGGAGGATG+GGG | - | chr4.2:29966857-29966876 | MS.gene73864:CDS | 55.0% | |
| TGCGGAGGTTGAGGTCTAGT+GGG | + | chr4.2:29964739-29964758 | None:intergenic | 55.0% | |
| TTGCGGAGGTTGAGGTCTAG+TGG | + | chr4.2:29964740-29964759 | None:intergenic | 55.0% | |
| ! | AGGCATGGCTAGGATGATGG+TGG | - | chr4.2:29965759-29965778 | MS.gene73864:intron | 55.0% |
| ! | GCATGGCTAGGATGATGGTG+GGG | - | chr4.2:29965761-29965780 | MS.gene73864:intron | 55.0% |
| ! | GGCATGGCTAGGATGATGGT+GGG | - | chr4.2:29965760-29965779 | MS.gene73864:intron | 55.0% |
| ! | GGTTGATGCACCAGAGAAGG+AGG | - | chr4.2:29966884-29966903 | MS.gene73864:CDS | 55.0% |
| ! | TGGGAGTGATGGGGAGTTTG+AGG | - | chr4.2:29966734-29966753 | MS.gene73864:CDS | 55.0% |
| !! | GAAGGAAGAGTGTCACGTGC+CGG | - | chr4.2:29966806-29966825 | MS.gene73864:CDS | 55.0% |
| AACGGAGGATGAGGTTGCGG+AGG | + | chr4.2:29964754-29964773 | None:intergenic | 60.0% | |
| ACAGGCAGGTCCTCCTTCTC+TGG | + | chr4.2:29966897-29966916 | None:intergenic | 60.0% | |
| CGCAACCTCATCCTCCGTTG+TGG | - | chr4.2:29964755-29964774 | MS.gene73864:CDS | 60.0% | |
| GCGTAGGGAGGATGGGGAAT+GGG | - | chr4.2:29966863-29966882 | MS.gene73864:CDS | 60.0% | |
| GCGTGGTACTACTAGGGACC+TGG | - | chr4.2:29965075-29965094 | MS.gene73864:CDS | 60.0% | |
| GGATGAGGTTGCGGAGGTTG+AGG | + | chr4.2:29964748-29964767 | None:intergenic | 60.0% | |
| GGTATGGTGCGTAGGGAGGA+TGG | - | chr4.2:29966855-29966874 | MS.gene73864:CDS | 60.0% | |
| TGCGTAGGGAGGATGGGGAA+TGG | - | chr4.2:29966862-29966881 | MS.gene73864:CDS | 60.0% | |
| GTCGCAACCCACCATGACGC+CGG | + | chr4.2:29966828-29966847 | None:intergenic | 65.0% | |
| ! | AGTGTCACGTGCCGGCGTCA+TGG | - | chr4.2:29966814-29966833 | MS.gene73864:CDS | 65.0% |
| ! | TCACGTGCCGGCGTCATGGT+GGG | - | chr4.2:29966818-29966837 | MS.gene73864:CDS | 65.0% |
| ! | GTCACGTGCCGGCGTCATGG+TGG | - | chr4.2:29966817-29966836 | MS.gene73864:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 29964626 | 29966932 | 29964626 | ID=MS.gene73864 |
| chr4.2 | mRNA | 29964626 | 29966932 | 29964626 | ID=MS.gene73864.t1;Parent=MS.gene73864 |
| chr4.2 | exon | 29966362 | 29966932 | 29966362 | ID=MS.gene73864.t1.exon1;Parent=MS.gene73864.t1 |
| chr4.2 | CDS | 29966362 | 29966932 | 29966362 | ID=cds.MS.gene73864.t1;Parent=MS.gene73864.t1 |
| chr4.2 | exon | 29964626 | 29965356 | 29964626 | ID=MS.gene73864.t1.exon2;Parent=MS.gene73864.t1 |
| chr4.2 | CDS | 29964626 | 29965356 | 29964626 | ID=cds.MS.gene73864.t1;Parent=MS.gene73864.t1 |
| Gene Sequence |
| Protein sequence |
