Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74025.t1 | XP_013450265.1 | 67.8 | 242 | 48 | 2 | 1 | 212 | 216 | 457 | 4.30E-82 | 314.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74025.t1 | Q9SZA4 | 57.3 | 241 | 74 | 1 | 1 | 212 | 217 | 457 | 6.5e-71 | 268.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74025.t1 | A0A072U570 | 67.8 | 242 | 48 | 2 | 1 | 212 | 216 | 457 | 3.1e-82 | 314.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049587 | MS.gene74025 | 0.808189 | 3.50E-50 | -1.69E-46 |
| MS.gene049701 | MS.gene74025 | 0.801667 | 8.08E-49 | -1.69E-46 |
| MS.gene051710 | MS.gene74025 | 0.846658 | 1.89E-59 | -1.69E-46 |
| MS.gene054801 | MS.gene74025 | 0.826506 | 2.61E-54 | -1.69E-46 |
| MS.gene058294 | MS.gene74025 | 0.80473 | 1.88E-49 | -1.69E-46 |
| MS.gene058515 | MS.gene74025 | 0.847136 | 1.40E-59 | -1.69E-46 |
| MS.gene059276 | MS.gene74025 | 0.822826 | 1.92E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74025.t1 | MTR_7g106870 | 85.124 | 242 | 6 | 2 | 1 | 212 | 216 | 457 | 6.39e-147 | 417 |
| MS.gene74025.t1 | MTR_5g008010 | 70.124 | 241 | 43 | 1 | 1 | 212 | 214 | 454 | 1.97e-123 | 357 |
| MS.gene74025.t1 | MTR_3g051690 | 68.182 | 242 | 47 | 2 | 1 | 212 | 218 | 459 | 1.17e-118 | 345 |
| MS.gene74025.t1 | MTR_7g034625 | 73.128 | 227 | 30 | 2 | 1 | 196 | 103 | 329 | 1.30e-115 | 333 |
| MS.gene74025.t1 | MTR_7g057540 | 68.313 | 243 | 41 | 4 | 1 | 212 | 189 | 426 | 7.91e-113 | 329 |
| MS.gene74025.t1 | MTR_7g055590 | 68.182 | 242 | 41 | 4 | 1 | 211 | 189 | 425 | 6.63e-111 | 327 |
| MS.gene74025.t1 | MTR_7g053100 | 65.432 | 243 | 50 | 3 | 1 | 212 | 197 | 436 | 4.06e-104 | 307 |
| MS.gene74025.t1 | MTR_7g451830 | 63.900 | 241 | 49 | 2 | 1 | 212 | 200 | 431 | 6.21e-104 | 306 |
| MS.gene74025.t1 | MTR_7g047640 | 63.900 | 241 | 49 | 2 | 1 | 212 | 200 | 431 | 6.21e-104 | 306 |
| MS.gene74025.t1 | MTR_2g100460 | 61.086 | 221 | 65 | 3 | 7 | 210 | 166 | 382 | 5.34e-87 | 262 |
| MS.gene74025.t1 | MTR_2g100540 | 54.506 | 233 | 38 | 7 | 7 | 208 | 196 | 391 | 7.85e-70 | 218 |
| MS.gene74025.t1 | MTR_3g067940 | 48.113 | 212 | 86 | 2 | 1 | 189 | 248 | 458 | 2.13e-65 | 209 |
| MS.gene74025.t1 | MTR_2g060710 | 47.685 | 216 | 81 | 4 | 7 | 191 | 216 | 430 | 3.00e-62 | 200 |
| MS.gene74025.t1 | MTR_4g102510 | 46.479 | 213 | 90 | 2 | 1 | 190 | 244 | 455 | 4.45e-62 | 200 |
| MS.gene74025.t1 | MTR_4g415070 | 61.818 | 55 | 21 | 0 | 137 | 191 | 57 | 111 | 2.49e-18 | 82.0 |
| MS.gene74025.t1 | MTR_2g012630 | 27.429 | 175 | 101 | 5 | 6 | 178 | 97 | 247 | 1.76e-11 | 63.2 |
| MS.gene74025.t1 | MTR_2g012630 | 27.429 | 175 | 101 | 5 | 6 | 178 | 97 | 247 | 2.31e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74025.t1 | AT4G33270 | 71.784 | 241 | 39 | 1 | 1 | 212 | 217 | 457 | 3.48e-123 | 356 |
| MS.gene74025.t1 | AT4G33260 | 71.784 | 241 | 39 | 1 | 1 | 212 | 207 | 447 | 6.59e-118 | 343 |
| MS.gene74025.t1 | AT5G27570 | 66.667 | 243 | 50 | 3 | 1 | 212 | 208 | 450 | 8.79e-108 | 317 |
| MS.gene74025.t1 | AT4G33260 | 69.643 | 224 | 39 | 1 | 1 | 195 | 207 | 430 | 3.00e-107 | 315 |
| MS.gene74025.t1 | AT5G27945 | 65.289 | 242 | 54 | 2 | 1 | 212 | 187 | 428 | 7.28e-107 | 314 |
| MS.gene74025.t1 | AT5G27080 | 64.198 | 243 | 56 | 3 | 1 | 212 | 200 | 442 | 2.26e-103 | 305 |
| MS.gene74025.t1 | AT5G26900 | 64.050 | 242 | 57 | 2 | 1 | 212 | 203 | 444 | 3.36e-103 | 305 |
| MS.gene74025.t1 | AT5G13840 | 48.585 | 212 | 85 | 2 | 1 | 189 | 250 | 460 | 2.42e-66 | 212 |
| MS.gene74025.t1 | AT5G13840 | 48.585 | 212 | 85 | 2 | 1 | 189 | 250 | 460 | 2.42e-66 | 212 |
| MS.gene74025.t1 | AT4G22910 | 47.170 | 212 | 88 | 2 | 2 | 190 | 253 | 463 | 1.37e-64 | 207 |
| MS.gene74025.t1 | AT4G11920 | 46.009 | 213 | 91 | 2 | 1 | 190 | 244 | 455 | 1.71e-62 | 201 |
Find 64 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGATGAAACTCTTAGATTT+TGG | 0.143277 | 7.3:-13289351 | MS.gene74025:CDS |
| GTGGCTTTGCATGCTTCTGC+TGG | 0.230906 | 7.3:+13289313 | None:intergenic |
| CCTTTGGAAGTATCCTTCTA+TGG | 0.254046 | 7.3:-13289461 | MS.gene74025:CDS |
| CAGGGTAATCTACTGGCTTC+TGG | 0.309255 | 7.3:-13289640 | MS.gene74025:CDS |
| GTATCCTTCTATGGTGAAAA+TGG | 0.311467 | 7.3:-13289452 | MS.gene74025:CDS |
| ACGATAATGTTGTTCACATA+TGG | 0.371186 | 7.3:-13289757 | MS.gene74025:CDS |
| AATCTACTGGCTTCTGGTGG+AGG | 0.376592 | 7.3:-13289634 | MS.gene74025:CDS |
| GTCATCATCTTCAACGAATA+CGG | 0.384451 | 7.3:+13289254 | None:intergenic |
| TTAGTAGCTCACGCTCATTC+TGG | 0.385492 | 7.3:+13289515 | None:intergenic |
| CACTTCGAGGGTGATGTATA+TGG | 0.388915 | 7.3:-13289413 | MS.gene74025:CDS |
| TGGCTTTGCATGCTTCTGCT+GGG | 0.422084 | 7.3:+13289314 | None:intergenic |
| CCGAGAACCAGCTTACCCTT+TGG | 0.427049 | 7.3:-13289477 | MS.gene74025:CDS |
| CTCACATCGTTGAAACATAC+AGG | 0.428220 | 7.3:-13289847 | MS.gene74025:CDS |
| CTACTGGCTTCTGGTGGAGG+TGG | 0.431389 | 7.3:-13289631 | MS.gene74025:CDS |
| AACAATCATATTCTGACAAC+AGG | 0.439142 | 7.3:-13289914 | MS.gene74025:CDS |
| CTGGCTTCTGGTGGAGGTGG+AGG | 0.440261 | 7.3:-13289628 | MS.gene74025:CDS |
| CAAGAGTGGGTTCACTGTCT+TGG | 0.449748 | 7.3:-13289937 | MS.gene74025:CDS |
| CGCAAGTATGTGCTCTGCTA+TGG | 0.473307 | 7.3:-13289540 | MS.gene74025:CDS |
| GATGCCACTGTACACCCATC+TGG | 0.480407 | 7.3:+13289382 | None:intergenic |
| ATCTCAACGGTCACACTTCG+AGG | 0.480528 | 7.3:-13289426 | MS.gene74025:CDS |
| CCAAAGGGTAAGCTGGTTCT+CGG | 0.481991 | 7.3:+13289477 | None:intergenic |
| ACTGCAGCTAAGGGCAATGA+AGG | 0.483352 | 7.3:-13289972 | None:intergenic |
| CGATAATGTTGTTCACATAT+GGG | 0.487900 | 7.3:-13289756 | MS.gene74025:CDS |
| TGTCCCTCAGGGTAATCTAC+TGG | 0.491265 | 7.3:-13289647 | MS.gene74025:intron |
| AAGGGCTCATTATATGACTT+TGG | 0.495746 | 7.3:+13289289 | None:intergenic |
| GGACACAACCAGGAGGTTTG+TGG | 0.497262 | 7.3:-13289824 | MS.gene74025:CDS |
| GATACTTCCAAAGGGTAAGC+TGG | 0.503616 | 7.3:+13289470 | None:intergenic |
| GACACAACCAGGAGGTTTGT+GGG | 0.510860 | 7.3:-13289823 | MS.gene74025:CDS |
| AACATACAGGGGACACAACC+AGG | 0.511067 | 7.3:-13289834 | MS.gene74025:CDS |
| CTCATTATATGACTTTGGTG+TGG | 0.524026 | 7.3:+13289294 | None:intergenic |
| TATTCTGACAACAGGAGGAA+TGG | 0.524698 | 7.3:-13289906 | MS.gene74025:CDS |
| GGGCTCAAGTGGTCACCCTC+AGG | 0.528586 | 7.3:-13289803 | MS.gene74025:CDS |
| AGGAGGTTTGTGGGCTCAAG+TGG | 0.528883 | 7.3:-13289814 | MS.gene74025:CDS |
| ACTTGAGCCCACAAACCTCC+TGG | 0.538177 | 7.3:+13289816 | None:intergenic |
| TCATCATCTTCAACGAATAC+GGG | 0.547121 | 7.3:+13289255 | None:intergenic |
| GGGTGGACACAGAGCAAGAG+TGG | 0.549117 | 7.3:-13289951 | MS.gene74025:CDS |
| GGTAATCTACTGGCTTCTGG+TGG | 0.565300 | 7.3:-13289637 | MS.gene74025:CDS |
| TATATGGCGCAAAGTCCAGA+TGG | 0.565373 | 7.3:-13289397 | MS.gene74025:CDS |
| CGTGAGCTACTAAGCTCACA+TGG | 0.568122 | 7.3:-13289505 | MS.gene74025:CDS |
| CTGACAACAGGAGGAATGGA+TGG | 0.572412 | 7.3:-13289902 | MS.gene74025:CDS |
| CATAGAAGGATACTTCCAAA+GGG | 0.584766 | 7.3:+13289462 | None:intergenic |
| TCACATATGGGATAGATCTG+TGG | 0.596581 | 7.3:-13289744 | MS.gene74025:intron |
| AGATTGAATTCAGTTGACAC+TGG | 0.597762 | 7.3:-13289565 | MS.gene74025:CDS |
| GGACAACAATTGTCAAGTGG+TGG | 0.599505 | 7.3:-13289782 | MS.gene74025:CDS |
| ATACGGGTGAAATTAGCAAA+GGG | 0.600657 | 7.3:+13289271 | None:intergenic |
| TCTCAACGGTCACACTTCGA+GGG | 0.613321 | 7.3:-13289425 | MS.gene74025:CDS |
| GTGAAAATGGCAGATCTCAA+CGG | 0.613838 | 7.3:-13289439 | MS.gene74025:CDS |
| AATACGGGTGAAATTAGCAA+AGG | 0.619999 | 7.3:+13289270 | None:intergenic |
| CAGCTAAGGGCAATGAAGGG+TGG | 0.622963 | 7.3:-13289968 | MS.gene74025:CDS |
| CCATAGAAGGATACTTCCAA+AGG | 0.623454 | 7.3:+13289461 | None:intergenic |
| AAGCTGTGGAACACACACAC+TGG | 0.630912 | 7.3:-13289592 | MS.gene74025:CDS |
| GTGATCATTGCATTAAGCTG+TGG | 0.635919 | 7.3:-13289606 | MS.gene74025:CDS |
| AATCATATTCTGACAACAGG+AGG | 0.641326 | 7.3:-13289911 | MS.gene74025:CDS |
| ACTTGACAATTGTTGTCCTG+AGG | 0.654097 | 7.3:+13289787 | None:intergenic |
| TCACATCGTTGAAACATACA+GGG | 0.656486 | 7.3:-13289846 | MS.gene74025:CDS |
| CTTGACAATTGTTGTCCTGA+GGG | 0.657303 | 7.3:+13289788 | None:intergenic |
| TCAGGACAACAATTGTCAAG+TGG | 0.664718 | 7.3:-13289785 | MS.gene74025:CDS |
| TGGGTGTACAGTGGCATCTG+CGG | 0.666837 | 7.3:-13289377 | MS.gene74025:CDS |
| CTGCAGCTAAGGGCAATGAA+GGG | 0.668716 | 7.3:-13289971 | None:intergenic |
| GGTGGACACAGAGCAAGAGT+GGG | 0.681424 | 7.3:-13289950 | MS.gene74025:CDS |
| AAGTCCAGATGGGTGTACAG+TGG | 0.686450 | 7.3:-13289386 | MS.gene74025:CDS |
| ATATGGCGCAAAGTCCAGAT+GGG | 0.692355 | 7.3:-13289396 | MS.gene74025:CDS |
| CACATCGTTGAAACATACAG+GGG | 0.758385 | 7.3:-13289845 | MS.gene74025:CDS |
| ATACAGGGGACACAACCAGG+AGG | 0.774768 | 7.3:-13289831 | MS.gene74025:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAGATTTTGGAATGTCTTT+GGG | - | chr7.3:13289890-13289909 | MS.gene74025:CDS | 25.0% |
| AACAATCATATTCTGACAAC+AGG | - | chr7.3:13289315-13289334 | MS.gene74025:CDS | 30.0% | |
| ACGATAATGTTGTTCACATA+TGG | - | chr7.3:13289472-13289491 | MS.gene74025:CDS | 30.0% | |
| CGATAATGTTGTTCACATAT+GGG | - | chr7.3:13289473-13289492 | MS.gene74025:CDS | 30.0% | |
| ! | CAGATGAAACTCTTAGATTT+TGG | - | chr7.3:13289878-13289897 | MS.gene74025:CDS | 30.0% |
| !!! | CTTAGATTTTGGAATGTCTT+TGG | - | chr7.3:13289889-13289908 | MS.gene74025:CDS | 30.0% |
| AAGGGCTCATTATATGACTT+TGG | + | chr7.3:13289943-13289962 | None:intergenic | 35.0% | |
| AATACGGGTGAAATTAGCAA+AGG | + | chr7.3:13289962-13289981 | None:intergenic | 35.0% | |
| AATCATATTCTGACAACAGG+AGG | - | chr7.3:13289318-13289337 | MS.gene74025:CDS | 35.0% | |
| AGATTGAATTCAGTTGACAC+TGG | - | chr7.3:13289664-13289683 | MS.gene74025:intron | 35.0% | |
| ATACGGGTGAAATTAGCAAA+GGG | + | chr7.3:13289961-13289980 | None:intergenic | 35.0% | |
| CATAGAAGGATACTTCCAAA+GGG | + | chr7.3:13289770-13289789 | None:intergenic | 35.0% | |
| CTCATTATATGACTTTGGTG+TGG | + | chr7.3:13289938-13289957 | None:intergenic | 35.0% | |
| GTATCCTTCTATGGTGAAAA+TGG | - | chr7.3:13289777-13289796 | MS.gene74025:CDS | 35.0% | |
| TCACATCGTTGAAACATACA+GGG | - | chr7.3:13289383-13289402 | MS.gene74025:CDS | 35.0% | |
| ACTTGACAATTGTTGTCCTG+AGG | + | chr7.3:13289445-13289464 | None:intergenic | 40.0% | |
| CACATCGTTGAAACATACAG+GGG | - | chr7.3:13289384-13289403 | MS.gene74025:CDS | 40.0% | |
| CCATAGAAGGATACTTCCAA+AGG | + | chr7.3:13289771-13289790 | None:intergenic | 40.0% | |
| CTCACATCGTTGAAACATAC+AGG | - | chr7.3:13289382-13289401 | MS.gene74025:CDS | 40.0% | |
| CTTGACAATTGTTGTCCTGA+GGG | + | chr7.3:13289444-13289463 | None:intergenic | 40.0% | |
| GTGAAAATGGCAGATCTCAA+CGG | - | chr7.3:13289790-13289809 | MS.gene74025:CDS | 40.0% | |
| GTGATCATTGCATTAAGCTG+TGG | - | chr7.3:13289623-13289642 | MS.gene74025:CDS | 40.0% | |
| TATTCTGACAACAGGAGGAA+TGG | - | chr7.3:13289323-13289342 | MS.gene74025:CDS | 40.0% | |
| TCACATATGGGATAGATCTG+TGG | - | chr7.3:13289485-13289504 | MS.gene74025:CDS | 40.0% | |
| TCAGGACAACAATTGTCAAG+TGG | - | chr7.3:13289444-13289463 | MS.gene74025:CDS | 40.0% | |
| !! | CCTTTGGAAGTATCCTTCTA+TGG | - | chr7.3:13289768-13289787 | MS.gene74025:CDS | 40.0% |
| !!! | TCTGCCATTTTCACCATAGA+AGG | + | chr7.3:13289784-13289803 | None:intergenic | 40.0% |
| AAGCCAGTAGATTACCCTGA+GGG | + | chr7.3:13289588-13289607 | None:intergenic | 45.0% | |
| ATATGGCGCAAAGTCCAGAT+GGG | - | chr7.3:13289833-13289852 | MS.gene74025:CDS | 45.0% | |
| CACTTCGAGGGTGATGTATA+TGG | - | chr7.3:13289816-13289835 | MS.gene74025:CDS | 45.0% | |
| CCTCAAACCTGTGAAGACAT+CGG | + | chr7.3:13289530-13289549 | None:intergenic | 45.0% | |
| CTCAAACCTGTGAAGACATC+GGG | + | chr7.3:13289529-13289548 | None:intergenic | 45.0% | |
| GATACTTCCAAAGGGTAAGC+TGG | + | chr7.3:13289762-13289781 | None:intergenic | 45.0% | |
| GGACAACAATTGTCAAGTGG+TGG | - | chr7.3:13289447-13289466 | MS.gene74025:CDS | 45.0% | |
| TATATGGCGCAAAGTCCAGA+TGG | - | chr7.3:13289832-13289851 | MS.gene74025:CDS | 45.0% | |
| TTAGTAGCTCACGCTCATTC+TGG | + | chr7.3:13289717-13289736 | None:intergenic | 45.0% | |
| AACATACAGGGGACACAACC+AGG | - | chr7.3:13289395-13289414 | MS.gene74025:CDS | 50.0% | |
| AACCTGTGAAGACATCGGGT+AGG | + | chr7.3:13289525-13289544 | None:intergenic | 50.0% | |
| AAGCTGTGGAACACACACAC+TGG | - | chr7.3:13289637-13289656 | MS.gene74025:CDS | 50.0% | |
| AAGTCCAGATGGGTGTACAG+TGG | - | chr7.3:13289843-13289862 | MS.gene74025:CDS | 50.0% | |
| ATCTCAACGGTCACACTTCG+AGG | - | chr7.3:13289803-13289822 | MS.gene74025:CDS | 50.0% | |
| CCGATGTCTTCACAGGTTTG+AGG | - | chr7.3:13289527-13289546 | MS.gene74025:CDS | 50.0% | |
| CGCAAGTATGTGCTCTGCTA+TGG | - | chr7.3:13289689-13289708 | MS.gene74025:intron | 50.0% | |
| CGTGAGCTACTAAGCTCACA+TGG | - | chr7.3:13289724-13289743 | MS.gene74025:intron | 50.0% | |
| CTGACAACAGGAGGAATGGA+TGG | - | chr7.3:13289327-13289346 | MS.gene74025:CDS | 50.0% | |
| GAAGCCAGTAGATTACCCTG+AGG | + | chr7.3:13289589-13289608 | None:intergenic | 50.0% | |
| GACACAACCAGGAGGTTTGT+GGG | - | chr7.3:13289406-13289425 | MS.gene74025:CDS | 50.0% | |
| GGAACACATAGCTGCTGTGA+AGG | - | chr7.3:13289548-13289567 | MS.gene74025:CDS | 50.0% | |
| TCTCAACGGTCACACTTCGA+GGG | - | chr7.3:13289804-13289823 | MS.gene74025:CDS | 50.0% | |
| TGTCCCTCAGGGTAATCTAC+TGG | - | chr7.3:13289582-13289601 | MS.gene74025:CDS | 50.0% | |
| ! | CAAGAGTGGGTTCACTGTCT+TGG | - | chr7.3:13289292-13289311 | MS.gene74025:CDS | 50.0% |
| ! | CCAAAGGGTAAGCTGGTTCT+CGG | + | chr7.3:13289755-13289774 | None:intergenic | 50.0% |
| ! | TGGCTTTGCATGCTTCTGCT+GGG | + | chr7.3:13289918-13289937 | None:intergenic | 50.0% |
| !! | AATCTACTGGCTTCTGGTGG+AGG | - | chr7.3:13289595-13289614 | MS.gene74025:CDS | 50.0% |
| !! | CAGGGTAATCTACTGGCTTC+TGG | - | chr7.3:13289589-13289608 | MS.gene74025:CDS | 50.0% |
| !! | GGTAATCTACTGGCTTCTGG+TGG | - | chr7.3:13289592-13289611 | MS.gene74025:CDS | 50.0% |
| ACTTGAGCCCACAAACCTCC+TGG | + | chr7.3:13289416-13289435 | None:intergenic | 55.0% | |
| AGGAGGTTTGTGGGCTCAAG+TGG | - | chr7.3:13289415-13289434 | MS.gene74025:CDS | 55.0% | |
| ATACAGGGGACACAACCAGG+AGG | - | chr7.3:13289398-13289417 | MS.gene74025:CDS | 55.0% | |
| CACCTACCCGATGTCTTCAC+AGG | - | chr7.3:13289520-13289539 | MS.gene74025:CDS | 55.0% | |
| CCGAGAACCAGCTTACCCTT+TGG | - | chr7.3:13289752-13289771 | MS.gene74025:CDS | 55.0% | |
| GATGCCACTGTACACCCATC+TGG | + | chr7.3:13289850-13289869 | None:intergenic | 55.0% | |
| GGACACAACCAGGAGGTTTG+TGG | - | chr7.3:13289405-13289424 | MS.gene74025:CDS | 55.0% | |
| GGTGGACACAGAGCAAGAGT+GGG | - | chr7.3:13289279-13289298 | MS.gene74025:CDS | 55.0% | |
| TGGGTGTACAGTGGCATCTG+CGG | - | chr7.3:13289852-13289871 | MS.gene74025:CDS | 55.0% | |
| ! | CATAGCTGCTGTGAAGGCAC+TGG | - | chr7.3:13289554-13289573 | MS.gene74025:CDS | 55.0% |
| ! | GTGGCTTTGCATGCTTCTGC+TGG | + | chr7.3:13289919-13289938 | None:intergenic | 55.0% |
| GGGTGGACACAGAGCAAGAG+TGG | - | chr7.3:13289278-13289297 | MS.gene74025:CDS | 60.0% | |
| !! | CACTGGCTTGGTGTCCCTCA+GGG | - | chr7.3:13289571-13289590 | MS.gene74025:CDS | 60.0% |
| !! | CTACTGGCTTCTGGTGGAGG+TGG | - | chr7.3:13289598-13289617 | MS.gene74025:CDS | 60.0% |
| !! | CTGCTGTGAAGGCACTGGCT+TGG | - | chr7.3:13289559-13289578 | MS.gene74025:CDS | 60.0% |
| CTGGCTTCTGGTGGAGGTGG+AGG | - | chr7.3:13289601-13289620 | MS.gene74025:CDS | 65.0% | |
| GGGCTCAAGTGGTCACCCTC+AGG | - | chr7.3:13289426-13289445 | MS.gene74025:CDS | 65.0% | |
| !! | GCACTGGCTTGGTGTCCCTC+AGG | - | chr7.3:13289570-13289589 | MS.gene74025:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 13289264 | 13289987 | 13289264 | ID=MS.gene74025 |
| chr7.3 | mRNA | 13289264 | 13289987 | 13289264 | ID=MS.gene74025.t1;Parent=MS.gene74025 |
| chr7.3 | exon | 13289745 | 13289987 | 13289745 | ID=MS.gene74025.t1.exon1;Parent=MS.gene74025.t1 |
| chr7.3 | CDS | 13289745 | 13289987 | 13289745 | ID=cds.MS.gene74025.t1;Parent=MS.gene74025.t1 |
| chr7.3 | exon | 13289264 | 13289659 | 13289264 | ID=MS.gene74025.t1.exon2;Parent=MS.gene74025.t1 |
| chr7.3 | CDS | 13289264 | 13289659 | 13289264 | ID=cds.MS.gene74025.t1;Parent=MS.gene74025.t1 |
| Gene Sequence |
| Protein sequence |
