Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74360.t1 | XP_003628195.1 | 97 | 497 | 15 | 0 | 1 | 497 | 1 | 497 | 3.70E-278 | 966.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74360.t1 | Q5E915 | 70.1 | 485 | 140 | 3 | 1 | 485 | 1 | 480 | 6.8e-196 | 684.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74360.t1 | G7L7T0 | 97.0 | 497 | 15 | 0 | 1 | 497 | 1 | 497 | 2.7e-278 | 966.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049341 | MS.gene74360 | 0.804618 | 1.98E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene74360 | MS.gene90863 | PPI |
| MS.gene74360 | MS.gene056221 | PPI |
| MS.gene74360 | MS.gene75146 | PPI |
| MS.gene016615 | MS.gene74360 | PPI |
| MS.gene024821 | MS.gene74360 | PPI |
| MS.gene60096 | MS.gene74360 | PPI |
| MS.gene74360 | MS.gene037409 | PPI |
| MS.gene74360 | MS.gene88509 | PPI |
| MS.gene74360 | MS.gene058069 | PPI |
| MS.gene74360 | MS.gene40494 | PPI |
| MS.gene74360 | MS.gene21793 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74360.t1 | MTR_8g045440 | 96.982 | 497 | 15 | 0 | 1 | 497 | 1 | 497 | 0.0 | 983 |
| MS.gene74360.t1 | MTR_8g041740 | 91.952 | 497 | 40 | 0 | 1 | 497 | 1 | 497 | 0.0 | 911 |
| MS.gene74360.t1 | MTR_8g045463 | 92.089 | 493 | 37 | 1 | 7 | 497 | 7 | 499 | 0.0 | 896 |
| MS.gene74360.t1 | MTR_8g045470 | 92.089 | 493 | 37 | 1 | 7 | 497 | 7 | 499 | 0.0 | 896 |
| MS.gene74360.t1 | MTR_8g045440 | 98.015 | 403 | 8 | 0 | 1 | 403 | 1 | 403 | 0.0 | 807 |
| MS.gene74360.t1 | MTR_5g069620 | 71.429 | 84 | 24 | 0 | 38 | 121 | 8 | 91 | 7.72e-35 | 126 |
| MS.gene74360.t1 | MTR_7g086360 | 25.000 | 340 | 191 | 12 | 29 | 362 | 61 | 342 | 1.56e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene74360.t1 | AT3G21060 | 70.226 | 487 | 140 | 3 | 1 | 487 | 1 | 482 | 0.0 | 674 |
| MS.gene74360.t1 | AT2G43770 | 23.824 | 340 | 195 | 13 | 29 | 362 | 59 | 340 | 1.50e-13 | 72.4 |
Find 123 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGTGATTGAAGAATATT+TGG | 0.157133 | 8.4:-55839905 | MS.gene74360:CDS |
| ATGATGGAAGCTGTGTTATT+TGG | 0.213605 | 8.4:-55836926 | MS.gene74360:CDS |
| TTCATATTCTTGCAGGTAAA+AGG | 0.213606 | 8.4:-55835779 | MS.gene74360:intron |
| GCTACCACTTCTTCCGAAAA+TGG | 0.216044 | 8.4:+55835566 | None:intergenic |
| TGTGTGGCATAGTTTATATC+TGG | 0.225456 | 8.4:-55835987 | MS.gene74360:CDS |
| CTCTCCATCACCACTGAAAC+AGG | 0.282312 | 8.4:+55836161 | None:intergenic |
| TCCTCAATCTCTTTGAAATC+AGG | 0.297441 | 8.4:+55835928 | None:intergenic |
| AATGCTCTAACTTCATCTTT+TGG | 0.301792 | 8.4:+55836309 | None:intergenic |
| AAATATTCTTCAATCACTTC+TGG | 0.306044 | 8.4:+55839907 | None:intergenic |
| CCAGTTCTCTATGTACTCTT+TGG | 0.307118 | 8.4:+55835963 | None:intergenic |
| ATATCAGAGTCGCTGAAATT+AGG | 0.326868 | 8.4:+55835704 | None:intergenic |
| TGCCAAGCAGAGAGATGATT+TGG | 0.342619 | 8.4:+55836692 | None:intergenic |
| ACCGATAATGGAGTTGTTCA+TGG | 0.343174 | 8.4:+55840187 | None:intergenic |
| TAGATAGTTCTTCGAAGATT+GGG | 0.351030 | 8.4:-55835610 | MS.gene74360:CDS |
| GATGCCACGCTAAATCAATA+AGG | 0.351990 | 8.4:+55836040 | None:intergenic |
| AAAAGCCTATCTTCCTGTTC+AGG | 0.357336 | 8.4:+55835632 | None:intergenic |
| GGTGATGGAGAGTGGGTTGT+TGG | 0.362512 | 8.4:-55836150 | MS.gene74360:CDS |
| CTCCCATCACCAGTATTTGT+TGG | 0.370774 | 8.4:-55836851 | MS.gene74360:CDS |
| CGTGGCATGGTTTCTATCTC+TGG | 0.372952 | 8.4:-55836432 | MS.gene74360:CDS |
| TTAGATAGTTCTTCGAAGAT+TGG | 0.374218 | 8.4:-55835611 | MS.gene74360:CDS |
| TGATGGAAGCTGTGTTATTT+GGG | 0.380302 | 8.4:-55836925 | MS.gene74360:CDS |
| GAGAACCTCGGTGATCTAAA+TGG | 0.383675 | 8.4:-55836273 | MS.gene74360:CDS |
| TTTGCTAGCTCGTCTTCATC+CGG | 0.385250 | 8.4:-55836721 | MS.gene74360:CDS |
| GAACCCTTGTTGCGTGAGAC+AGG | 0.398687 | 8.4:+55836573 | None:intergenic |
| ACCATGAACAACTCCATTAT+CGG | 0.399710 | 8.4:-55840188 | MS.gene74360:intron |
| ACACTTTGACCAACAAATAC+TGG | 0.409133 | 8.4:+55836842 | None:intergenic |
| CATTCCCGATGTTCCTGAAC+AGG | 0.418512 | 8.4:-55835645 | MS.gene74360:CDS |
| GGGCTTCCTTAGGCCCTTCA+AGG | 0.426153 | 8.4:+55836061 | None:intergenic |
| TTGCTAGCTCGTCTTCATCC+GGG | 0.427639 | 8.4:-55836720 | MS.gene74360:CDS |
| CAAAGAGATTGAGGAAAATG+AGG | 0.433376 | 8.4:-55835920 | MS.gene74360:CDS |
| CTTGTAATTGACAGTAAAGA+TGG | 0.434768 | 8.4:-55836462 | MS.gene74360:CDS |
| AAAGAAACAGACACAACAAT+TGG | 0.439804 | 8.4:+55836009 | None:intergenic |
| TTGTTGCGTGAGACAGGGTT+TGG | 0.440027 | 8.4:+55836579 | None:intergenic |
| CGCCGCGGTACCCTTCTTGC+TGG | 0.440255 | 8.4:-55839850 | MS.gene74360:intron |
| TGAGGAAAATGAGGAGTATG+TGG | 0.443627 | 8.4:-55835911 | MS.gene74360:CDS |
| TCCTGATTTCAAAGAGATTG+AGG | 0.446776 | 8.4:-55835929 | MS.gene74360:CDS |
| GTGTGGCATAGTTTATATCT+GGG | 0.447441 | 8.4:-55835986 | MS.gene74360:CDS |
| GTGTTCAAGTCAACAATCAT+TGG | 0.449074 | 8.4:+55836651 | None:intergenic |
| CTCCAAATCATCTCTCTGCT+TGG | 0.452595 | 8.4:-55836694 | MS.gene74360:CDS |
| CTGTTCAGGAACATCGGGAA+TGG | 0.462989 | 8.4:+55835646 | None:intergenic |
| GATGGAGAGTGGGTTGTTGG+TGG | 0.468537 | 8.4:-55836147 | MS.gene74360:CDS |
| CATGCCTCAAGTCCACTTGA+AGG | 0.471872 | 8.4:-55835524 | MS.gene74360:CDS |
| TCACATACATTATCAGTGTC+AGG | 0.473182 | 8.4:+55835862 | None:intergenic |
| ATGTTCCTGAACAGGAAGAT+AGG | 0.475940 | 8.4:-55835637 | MS.gene74360:CDS |
| GAGAGCACAAGATTTACATA+TGG | 0.478073 | 8.4:-55836110 | MS.gene74360:CDS |
| TCGGAAGAAGTGGTAGCAAA+TGG | 0.478453 | 8.4:-55835560 | MS.gene74360:CDS |
| GAATCAGCTGGCTGCAATGA+TGG | 0.479058 | 8.4:-55836942 | MS.gene74360:intron |
| CATCTTGTGAAAATCCTTGA+AGG | 0.482006 | 8.4:-55836075 | MS.gene74360:CDS |
| CCAAAGAGTACATAGAGAAC+TGG | 0.483830 | 8.4:-55835963 | MS.gene74360:CDS |
| GTATGGAAACCTGGTTTATG+TGG | 0.490370 | 8.4:-55836505 | MS.gene74360:CDS |
| TCTTCCTGTTCAGGAACATC+GGG | 0.496645 | 8.4:+55835641 | None:intergenic |
| TTGAAGAATATTTGGAACAT+GGG | 0.501031 | 8.4:-55839897 | MS.gene74360:CDS |
| TGTTCAGGAACATCGGGAAT+GGG | 0.501740 | 8.4:+55835647 | None:intergenic |
| TGACCAACAAATACTGGTGA+TGG | 0.505055 | 8.4:+55836848 | None:intergenic |
| GACACAACAATTGGACGTAC+AGG | 0.508623 | 8.4:+55836018 | None:intergenic |
| TGAAGAACATTGTATTCAGC+AGG | 0.511366 | 8.4:-55836398 | MS.gene74360:CDS |
| ATGCCACGCTAAATCAATAA+GGG | 0.511908 | 8.4:+55836041 | None:intergenic |
| AACATTGTATTCAGCAGGAA+TGG | 0.517859 | 8.4:-55836393 | MS.gene74360:CDS |
| GAGACAGGGTTTGGTCCACT+TGG | 0.523067 | 8.4:+55836588 | None:intergenic |
| TCACGCAACAAGGGTTCTGA+TGG | 0.523362 | 8.4:-55836567 | MS.gene74360:CDS |
| AAATCAATAAGGGCTTCCTT+AGG | 0.523475 | 8.4:+55836051 | None:intergenic |
| GCACCCTGTTTCAGTGGTGA+TGG | 0.531362 | 8.4:-55836165 | MS.gene74360:CDS |
| GATGAAGACGAGCTAGCAAA+GGG | 0.534466 | 8.4:+55836724 | None:intergenic |
| GTTTCAGTGGTGATGGAGAG+TGG | 0.534496 | 8.4:-55836158 | MS.gene74360:CDS |
| ATTGAAGAATATTTGGAACA+TGG | 0.536169 | 8.4:-55839898 | MS.gene74360:CDS |
| GTTGTGTCTGTTTCTTTGTG+TGG | 0.539897 | 8.4:-55836003 | MS.gene74360:CDS |
| CAAGCAGAGAGATGATTTGG+AGG | 0.545050 | 8.4:+55836695 | None:intergenic |
| ATCTTCCTGTTCAGGAACAT+CGG | 0.551073 | 8.4:+55835640 | None:intergenic |
| ATGCAATCACGAAAGTGCAC+TGG | 0.552939 | 8.4:-55836191 | MS.gene74360:CDS |
| AGAGCACAAGATTTACATAT+GGG | 0.555323 | 8.4:-55836109 | MS.gene74360:CDS |
| GAAAATCCTTGAAGGGCCTA+AGG | 0.556664 | 8.4:-55836067 | MS.gene74360:CDS |
| AACCCTTGTTGCGTGAGACA+GGG | 0.563354 | 8.4:+55836574 | None:intergenic |
| TGCTAGCTCGTCTTCATCCG+GGG | 0.567258 | 8.4:-55836719 | MS.gene74360:CDS |
| CTTCAAGTGGACTTGAGGCA+TGG | 0.571372 | 8.4:+55835525 | None:intergenic |
| TACCACTCAAAACATCCCAC+AGG | 0.572904 | 8.4:+55836778 | None:intergenic |
| AGATAGTTCTTCGAAGATTG+GGG | 0.573049 | 8.4:-55835609 | MS.gene74360:CDS |
| AAACCCTGTCTCACGCAACA+AGG | 0.574516 | 8.4:-55836577 | MS.gene74360:CDS |
| ATTGGGGACAGCAATAACTC+TGG | 0.576784 | 8.4:-55835593 | MS.gene74360:CDS |
| TTTCAGTGGTGATGGAGAGT+GGG | 0.579791 | 8.4:-55836157 | MS.gene74360:CDS |
| TGGAAGGCACCCTGTTTCAG+TGG | 0.579970 | 8.4:-55836171 | MS.gene74360:CDS |
| ATTTACATATGGGATAGAGC+TGG | 0.580981 | 8.4:-55836099 | MS.gene74360:CDS |
| ATTACCTTCAAGTGGACTTG+AGG | 0.584311 | 8.4:+55835520 | None:intergenic |
| TCGAGTTTCCCACATAAACC+AGG | 0.588345 | 8.4:+55836496 | None:intergenic |
| AAATGGTGTTGAGAAGTTGA+AGG | 0.591187 | 8.4:-55836256 | MS.gene74360:CDS |
| ATCTGATGTCAATGAAGATG+AGG | 0.592161 | 8.4:-55835756 | MS.gene74360:CDS |
| GTTGGTGGTTCTGCTAGCAA+AGG | 0.593351 | 8.4:-55836132 | MS.gene74360:CDS |
| GGCGTGACATTACCTTCAAG+TGG | 0.593844 | 8.4:+55835512 | None:intergenic |
| TTACTAAAACATGCAGCAGT+AGG | 0.595182 | 8.4:+55836528 | None:intergenic |
| GACCAACAAATACTGGTGAT+GGG | 0.601286 | 8.4:+55836849 | None:intergenic |
| TAGATAACGTAGCTCTTCCT+CGG | 0.601900 | 8.4:+55835679 | None:intergenic |
| GGATGAAGACGAGCTAGCAA+AGG | 0.602138 | 8.4:+55836723 | None:intergenic |
| ATCTTGTGAAAATCCTTGAA+GGG | 0.602213 | 8.4:-55836074 | MS.gene74360:CDS |
| GGCATGGTTTCTATCTCTGG+TGG | 0.603497 | 8.4:-55836429 | MS.gene74360:CDS |
| ACATGCAGCAGTAGGTGTGA+AGG | 0.605285 | 8.4:+55836536 | None:intergenic |
| AGATGGTGAGGTGCGTGGCA+TGG | 0.609126 | 8.4:-55836445 | MS.gene74360:CDS |
| TATGGAAACCTGGTTTATGT+GGG | 0.609917 | 8.4:-55836504 | MS.gene74360:CDS |
| TGACAAGTCGTTATCCCTGT+GGG | 0.614779 | 8.4:-55836793 | MS.gene74360:CDS |
| AACCCTGTCTCACGCAACAA+GGG | 0.615851 | 8.4:-55836576 | MS.gene74360:CDS |
| AGAGATGATTTGGAGGACCC+CGG | 0.619630 | 8.4:+55836702 | None:intergenic |
| TGACATTGTGACAGTCGAGA+AGG | 0.620507 | 8.4:-55835729 | MS.gene74360:CDS |
| GATGTTGAAGATCCGTTGCA+AGG | 0.623904 | 8.4:-55839937 | MS.gene74360:intron |
| AGTATTTGTTGGTCAAAGTG+TGG | 0.624701 | 8.4:-55836840 | MS.gene74360:CDS |
| CTGACAAGTCGTTATCCCTG+TGG | 0.627369 | 8.4:-55836794 | MS.gene74360:CDS |
| GTTTATGTGGGAAACTCGAA+AGG | 0.631466 | 8.4:-55836492 | MS.gene74360:CDS |
| TGATTGCATCTTGAAACTCA+CGG | 0.633891 | 8.4:+55836205 | None:intergenic |
| ATCATTGGAGCACATGAGAG+AGG | 0.635797 | 8.4:+55836666 | None:intergenic |
| ACATCGGGAATGGGAGACAC+TGG | 0.636235 | 8.4:+55835656 | None:intergenic |
| TCTGGAAAATCACCTTGCAA+CGG | 0.637632 | 8.4:+55839925 | None:intergenic |
| TCTCCATCACCACTGAAACA+GGG | 0.640101 | 8.4:+55836162 | None:intergenic |
| TCTGTCTCTGACAAACCAAG+TGG | 0.648181 | 8.4:-55836603 | MS.gene74360:CDS |
| AAGCCCTTATTGATTTAGCG+TGG | 0.655079 | 8.4:-55836044 | MS.gene74360:CDS |
| TGCAGCAGTAGGTGTGAAGG+AGG | 0.657772 | 8.4:+55836539 | None:intergenic |
| ACCACTCAAAACATCCCACA+GGG | 0.664782 | 8.4:+55836779 | None:intergenic |
| CAGCGACTCTGATATGTCCG+AGG | 0.676024 | 8.4:-55835696 | MS.gene74360:CDS |
| GCTGAATTGAACGAGAACCT+CGG | 0.676455 | 8.4:-55836285 | MS.gene74360:CDS |
| GTTGAGAAGTTGAAGGCTGT+AGG | 0.680893 | 8.4:-55836249 | MS.gene74360:CDS |
| AGTAAAGATGGTGAGGTGCG+TGG | 0.690847 | 8.4:-55836450 | MS.gene74360:CDS |
| TACCAGCAAGAAGGGTACCG+CGG | 0.692200 | 8.4:+55839848 | None:intergenic |
| AATCACGAAAGTGCACTGGA+AGG | 0.694138 | 8.4:-55836187 | MS.gene74360:CDS |
| AATTGACAGTAAAGATGGTG+AGG | 0.704790 | 8.4:-55836457 | MS.gene74360:CDS |
| TGTATTGCTTTCAATCGCCG+CGG | 0.713153 | 8.4:-55839865 | MS.gene74360:CDS |
| CAACACCATTTAGATCACCG+AGG | 0.738329 | 8.4:+55836268 | None:intergenic |
| ATGAAGACGAGCTAGCAAAG+GGG | 0.760208 | 8.4:+55836725 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTTTTAAAAAAA+AGG | - | chr8.4:55836946-55836965 | MS.gene74360:intron | 0.0% |
| !!! | AGATTTTGATTTTTTATTTT+AGG | - | chr8.4:55835977-55835996 | MS.gene74360:CDS | 10.0% |
| !!! | TTTTTTTTTTTTTTACTTCT+TGG | - | chr8.4:55837484-55837503 | MS.gene74360:intron | 10.0% |
| !! | AAAGCTTATTTACTTTATAA+TGG | - | chr8.4:55837522-55837541 | MS.gene74360:intron | 15.0% |
| !! | CTTAAAACTTTACTTTATAA+TGG | - | chr8.4:55836631-55836650 | MS.gene74360:CDS | 15.0% |
| !! | GATAATATATGTAATGATTA+GGG | - | chr8.4:55835556-55835575 | MS.gene74360:CDS | 15.0% |
| !! | TAATAATGAACTTTGATTAT+TGG | - | chr8.4:55837561-55837580 | MS.gene74360:intron | 15.0% |
| !! | TATAAAGTAAATAAGCTTTA+GGG | + | chr8.4:55837521-55837540 | None:intergenic | 15.0% |
| !! | TGATAATATATGTAATGATT+AGG | - | chr8.4:55835555-55835574 | MS.gene74360:CDS | 15.0% |
| !! | TTATAAAGTAAATAAGCTTT+AGG | + | chr8.4:55837522-55837541 | None:intergenic | 15.0% |
| !!! | AAATTCTAGCATTTTAATTT+GGG | - | chr8.4:55837141-55837160 | MS.gene74360:intron | 15.0% |
| !!! | AATGTTATTAATTATGGTTT+TGG | - | chr8.4:55835719-55835738 | MS.gene74360:CDS | 15.0% |
| !!! | GTATTTAATTTGTATATGTA+AGG | - | chr8.4:55837787-55837806 | MS.gene74360:intron | 15.0% |
| !!! | TAAATTCTAGCATTTTAATT+TGG | - | chr8.4:55837140-55837159 | MS.gene74360:intron | 15.0% |
| !!! | TCTGATAATGTTATTAATTA+TGG | - | chr8.4:55835713-55835732 | MS.gene74360:CDS | 15.0% |
| !! | AAGTGACATAATAAAACATT+AGG | + | chr8.4:55835653-55835672 | None:intergenic | 20.0% |
| !! | ACATAGATCTTACAATATAT+TGG | - | chr8.4:55837764-55837783 | MS.gene74360:intron | 20.0% |
| !! | AGTGACATAATAAAACATTA+GGG | + | chr8.4:55835652-55835671 | None:intergenic | 20.0% |
| !! | CATAGATCTTACAATATATT+GGG | - | chr8.4:55837765-55837784 | MS.gene74360:intron | 20.0% |
| !! | GTAGTTATGTCAAATTTAAA+GGG | - | chr8.4:55836174-55836193 | MS.gene74360:CDS | 20.0% |
| !! | TATGGAAAGTAAAAAGATAT+TGG | - | chr8.4:55838213-55838232 | MS.gene74360:intron | 20.0% |
| !! | TGTAGTTATGTCAAATTTAA+AGG | - | chr8.4:55836173-55836192 | MS.gene74360:CDS | 20.0% |
| !! | TTTGAACCATATGAAAAATT+GGG | - | chr8.4:55836342-55836361 | MS.gene74360:CDS | 20.0% |
| !!! | AAATTTAAAGGGTTTTATTG+AGG | - | chr8.4:55836185-55836204 | MS.gene74360:CDS | 20.0% |
| !!! | ACTATATTTATTTTCCTAGT+GGG | - | chr8.4:55838497-55838516 | MS.gene74360:intron | 20.0% |
| !!! | ATTTTAGTGACCATTTTATA+GGG | - | chr8.4:55835904-55835923 | MS.gene74360:CDS | 20.0% |
| !!! | GGTATTTTCAAAAAAACATT+AGG | - | chr8.4:55838295-55838314 | MS.gene74360:intron | 20.0% |
| !!! | GTAAGTAAATTATGATTTTG+TGG | + | chr8.4:55835630-55835649 | None:intergenic | 20.0% |
| !!! | TACTATATTTATTTTCCTAG+TGG | - | chr8.4:55838496-55838515 | MS.gene74360:intron | 20.0% |
| !!! | TATTTTAGTGACCATTTTAT+AGG | - | chr8.4:55835903-55835922 | MS.gene74360:CDS | 20.0% |
| !!! | TCATAATCATTTTGAGAAAT+TGG | + | chr8.4:55835538-55835557 | None:intergenic | 20.0% |
| !!! | TTCTTTTCTTTTCCATTTTA+TGG | - | chr8.4:55839865-55839884 | MS.gene74360:CDS | 20.0% |
| !!! | TTTTATTGAGGTTTATATTG+TGG | - | chr8.4:55836197-55836216 | MS.gene74360:CDS | 20.0% |
| !!! | TTTTTTGAAAATACCAAAGT+TGG | + | chr8.4:55838290-55838309 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTTTACTTCTTGG+TGG | - | chr8.4:55837487-55837506 | MS.gene74360:intron | 20.0% |
| ! | AAACAAGCATACAAAAAAGA+GGG | + | chr8.4:55835869-55835888 | None:intergenic | 25.0% |
| ! | AAATATTCTTCAATCACTTC+TGG | + | chr8.4:55835774-55835793 | None:intergenic | 25.0% |
| ! | AATATTTATTGTCACTGTGA+CGG | - | chr8.4:55836307-55836326 | MS.gene74360:CDS | 25.0% |
| ! | AGAAGTGATTGAAGAATATT+TGG | - | chr8.4:55835773-55835792 | MS.gene74360:intron | 25.0% |
| ! | ATATTGTATTAACACACACA+TGG | + | chr8.4:55837632-55837651 | None:intergenic | 25.0% |
| ! | ATTTGATAAATTGAATCAGC+TGG | - | chr8.4:55838724-55838743 | MS.gene74360:intron | 25.0% |
| ! | CAGTATAAAACCCTATAAAA+TGG | + | chr8.4:55835917-55835936 | None:intergenic | 25.0% |
| ! | GTTTGAACCATATGAAAAAT+TGG | - | chr8.4:55836341-55836360 | MS.gene74360:CDS | 25.0% |
| ! | TAATGTATGTGAACGTTATA+TGG | - | chr8.4:55839827-55839846 | MS.gene74360:intron | 25.0% |
| ! | TATTCCTTGTAGTAAATATG+CGG | - | chr8.4:55836448-55836467 | MS.gene74360:CDS | 25.0% |
| ! | TCAAATAAAAACAGTGTGAA+TGG | + | chr8.4:55836607-55836626 | None:intergenic | 25.0% |
| ! | TCATTGCATTACAATAGAAT+TGG | + | chr8.4:55838147-55838166 | None:intergenic | 25.0% |
| ! | TCTATATCACATTGATACTA+GGG | - | chr8.4:55838069-55838088 | MS.gene74360:intron | 25.0% |
| !! | ATTGAAGAATATTTGGAACA+TGG | - | chr8.4:55835780-55835799 | MS.gene74360:intron | 25.0% |
| !! | GTATACTCAGAAACTTTTTA+TGG | + | chr8.4:55838479-55838498 | None:intergenic | 25.0% |
| !! | TCCAACATTTTTCCTAATTA+AGG | + | chr8.4:55837824-55837843 | None:intergenic | 25.0% |
| !! | TTGAAGAATATTTGGAACAT+GGG | - | chr8.4:55835781-55835800 | MS.gene74360:intron | 25.0% |
| !! | TTGCTATTGATATGATTGTA+TGG | - | chr8.4:55838195-55838214 | MS.gene74360:intron | 25.0% |
| !! | TTTTCAAACCACCATAAAAA+AGG | + | chr8.4:55836082-55836101 | None:intergenic | 25.0% |
| !!! | ATCTGCCTTTTATTTTAAAC+CGG | + | chr8.4:55835961-55835980 | None:intergenic | 25.0% |
| !!! | TAGTTTTCTGTATTGATATC+CGG | - | chr8.4:55838046-55838065 | MS.gene74360:intron | 25.0% |
| !!! | TATACCTTTATCCTGTTTTT+TGG | - | chr8.4:55838120-55838139 | MS.gene74360:intron | 25.0% |
| !!! | TGAGTTCATAACCTTTTTTA+TGG | - | chr8.4:55836068-55836087 | MS.gene74360:CDS | 25.0% |
| !!! | TTCATTAAACTTTGAAGTAG+TGG | - | chr8.4:55837668-55837687 | MS.gene74360:intron | 25.0% |
| AAAGAAACAGACACAACAAT+TGG | + | chr8.4:55839672-55839691 | None:intergenic | 30.0% | |
| ACTTGGTTAAGACCATAAAA+TGG | + | chr8.4:55839880-55839899 | None:intergenic | 30.0% | |
| AGAGAAAAACTAACCGATAA+TGG | + | chr8.4:55835506-55835525 | None:intergenic | 30.0% | |
| AGAGCACAAGATTTACATAT+GGG | - | chr8.4:55839569-55839588 | MS.gene74360:intron | 30.0% | |
| AGTATCAATGTGATATAGAC+CGG | + | chr8.4:55838068-55838087 | None:intergenic | 30.0% | |
| ATAGAATTGGACCAAAAAAC+AGG | + | chr8.4:55838134-55838153 | None:intergenic | 30.0% | |
| ATCTTGTGAAAATCCTTGAA+GGG | - | chr8.4:55839604-55839623 | MS.gene74360:intron | 30.0% | |
| CAAAATACCCTTTATCTAGT+TGG | - | chr8.4:55836121-55836140 | MS.gene74360:CDS | 30.0% | |
| CAAACAAGCATACAAAAAAG+AGG | + | chr8.4:55835870-55835889 | None:intergenic | 30.0% | |
| CATCACTTTATAGAGAATTG+TGG | - | chr8.4:55836233-55836252 | MS.gene74360:CDS | 30.0% | |
| CCTATCTCTGTAGTAAATAA+CGG | - | chr8.4:55837321-55837340 | MS.gene74360:intron | 30.0% | |
| CTATACAGCTATAGCATTTA+TGG | - | chr8.4:55837706-55837725 | MS.gene74360:intron | 30.0% | |
| CTTGTAATTGACAGTAAAGA+TGG | - | chr8.4:55839216-55839235 | MS.gene74360:intron | 30.0% | |
| GCCTTAATTAGGAAAAATGT+TGG | - | chr8.4:55837820-55837839 | MS.gene74360:intron | 30.0% | |
| GCTATAATTGATGCCAAATT+AGG | - | chr8.4:55837869-55837888 | MS.gene74360:intron | 30.0% | |
| GTCTATATCACATTGATACT+AGG | - | chr8.4:55838068-55838087 | MS.gene74360:intron | 30.0% | |
| TAGATAGTTCTTCGAAGATT+GGG | - | chr8.4:55840068-55840087 | MS.gene74360:intron | 30.0% | |
| TATAGCCATAAATCTGCAAT+TGG | + | chr8.4:55837855-55837874 | None:intergenic | 30.0% | |
| TCTATGTGTTCAATGAAGAA+CGG | + | chr8.4:55837751-55837770 | None:intergenic | 30.0% | |
| TGAAAATTAGCCAAATCACA+GGG | - | chr8.4:55836039-55836058 | MS.gene74360:CDS | 30.0% | |
| TGTGCTGCATGTAATTTATT+TGG | - | chr8.4:55838422-55838441 | MS.gene74360:intron | 30.0% | |
| TTAGATAGTTCTTCGAAGAT+TGG | - | chr8.4:55840067-55840086 | MS.gene74360:intron | 30.0% | |
| TTAGTGAGTGTATATCTTTC+TGG | - | chr8.4:55838541-55838560 | MS.gene74360:intron | 30.0% | |
| TTCATATTCTTGCAGGTAAA+AGG | - | chr8.4:55839899-55839918 | MS.gene74360:CDS | 30.0% | |
| TTTGTATATGTAAGGTCGAT+TGG | - | chr8.4:55837795-55837814 | MS.gene74360:intron | 30.0% | |
| ! | AATAAGTTGAGGGCAAATTT+GGG | + | chr8.4:55837448-55837467 | None:intergenic | 30.0% |
| ! | AATGCTCTAACTTCATCTTT+TGG | + | chr8.4:55839372-55839391 | None:intergenic | 30.0% |
| ! | ATGTGCACTTTGTAAGTTTT+GGG | - | chr8.4:55836799-55836818 | MS.gene74360:CDS | 30.0% |
| ! | CAGAAACCCAATTTTTCATA+TGG | + | chr8.4:55836351-55836370 | None:intergenic | 30.0% |
| ! | CGAATCCGGTTTAAAATAAA+AGG | - | chr8.4:55835953-55835972 | MS.gene74360:CDS | 30.0% |
| ! | TATAGCATTTATGGTGGTTT+TGG | - | chr8.4:55837715-55837734 | MS.gene74360:intron | 30.0% |
| ! | TTAGGTTGTAAACATTCAAG+TGG | - | chr8.4:55838313-55838332 | MS.gene74360:intron | 30.0% |
| ! | TTTTAGTAAGTATGGAAACC+TGG | - | chr8.4:55839164-55839183 | MS.gene74360:intron | 30.0% |
| !! | AAAGATATTGGTTCTGTCAA+TGG | - | chr8.4:55838225-55838244 | MS.gene74360:intron | 30.0% |
| !! | AATAACTTGAGGGCATATTT+TGG | + | chr8.4:55836583-55836602 | None:intergenic | 30.0% |
| !!! | CAACTAGATAAAGGGTATTT+TGG | + | chr8.4:55836123-55836142 | None:intergenic | 30.0% |
| !!! | GTTCATAACCTTTTTTATGG+TGG | - | chr8.4:55836071-55836090 | MS.gene74360:CDS | 30.0% |
| !!! | TATTTGGGATTTTGAAGTCA+GGG | - | chr8.4:55838768-55838787 | MS.gene74360:intron | 30.0% |
| !!! | TTATTTGGGATTTTGAAGTC+AGG | - | chr8.4:55838767-55838786 | MS.gene74360:intron | 30.0% |
| AAACTCATCCCAAAAGGTTT+AGG | + | chr8.4:55838388-55838407 | None:intergenic | 35.0% | |
| AAATCAATAAGGGCTTCCTT+AGG | + | chr8.4:55839630-55839649 | None:intergenic | 35.0% | |
| AACATTGTATTCAGCAGGAA+TGG | - | chr8.4:55839285-55839304 | MS.gene74360:intron | 35.0% | |
| AACCAAGTTCATATTCTTGC+AGG | - | chr8.4:55839892-55839911 | MS.gene74360:CDS | 35.0% | |
| AAGTGCATGAAGACAATACA+AGG | + | chr8.4:55836890-55836909 | None:intergenic | 35.0% | |
| AATTGACAGTAAAGATGGTG+AGG | - | chr8.4:55839221-55839240 | MS.gene74360:intron | 35.0% | |
| AATTTCTGCAGTTTCTGTCA+AGG | - | chr8.4:55837962-55837981 | MS.gene74360:intron | 35.0% | |
| ACAAGGAACAAACACAACAT+AGG | + | chr8.4:55836873-55836892 | None:intergenic | 35.0% | |
| ACACTTTGACCAACAAATAC+TGG | + | chr8.4:55838839-55838858 | None:intergenic | 35.0% | |
| AGATAGTTCTTCGAAGATTG+GGG | - | chr8.4:55840069-55840088 | MS.gene74360:intron | 35.0% | |
| AGTAACATGAGTGAGAAAGT+TGG | + | chr8.4:55838702-55838721 | None:intergenic | 35.0% | |
| ATATCAGAGTCGCTGAAATT+AGG | + | chr8.4:55839977-55839996 | None:intergenic | 35.0% | |
| ATCTGATGTCAATGAAGATG+AGG | - | chr8.4:55839922-55839941 | MS.gene74360:CDS | 35.0% | |
| ATGAAAAATTGGGTTTCTGC+TGG | - | chr8.4:55836352-55836371 | MS.gene74360:CDS | 35.0% | |
| ATGCCACGCTAAATCAATAA+GGG | + | chr8.4:55839640-55839659 | None:intergenic | 35.0% | |
| ATTTACATATGGGATAGAGC+TGG | - | chr8.4:55839579-55839598 | MS.gene74360:intron | 35.0% | |
| ATTTACTACAGAGATAGGCT+TGG | + | chr8.4:55837319-55837338 | None:intergenic | 35.0% | |
| CAAAACATTGAGCTTGAATC+TGG | - | chr8.4:55836993-55837012 | MS.gene74360:intron | 35.0% | |
| CAAAGAGATTGAGGAAAATG+AGG | - | chr8.4:55839758-55839777 | MS.gene74360:intron | 35.0% | |
| CAAGGAACAAACACAACATA+GGG | + | chr8.4:55836872-55836891 | None:intergenic | 35.0% | |
| CATCTTGTGAAAATCCTTGA+AGG | - | chr8.4:55839603-55839622 | MS.gene74360:intron | 35.0% | |
| CCGTTATTTACTACAGAGAT+AGG | + | chr8.4:55837324-55837343 | None:intergenic | 35.0% | |
| CTCAAATAATCCCTGTGATT+TGG | + | chr8.4:55836052-55836071 | None:intergenic | 35.0% | |
| CTGAAAATTAGCCAAATCAC+AGG | - | chr8.4:55836038-55836057 | MS.gene74360:CDS | 35.0% | |
| GATTGCCAATTGCAGATTTA+TGG | - | chr8.4:55837847-55837866 | MS.gene74360:intron | 35.0% | |
| GTGTGGCATAGTTTATATCT+GGG | - | chr8.4:55839692-55839711 | MS.gene74360:intron | 35.0% | |
| GTGTTCAAGTCAACAATCAT+TGG | + | chr8.4:55839030-55839049 | None:intergenic | 35.0% | |
| TACAGCTATAGCATTTATGG+TGG | - | chr8.4:55837709-55837728 | MS.gene74360:intron | 35.0% | |
| TACCTGCAAGAATATGAACT+TGG | + | chr8.4:55839897-55839916 | None:intergenic | 35.0% | |
| TATAGCTGTATAGTGTGCAA+CGG | + | chr8.4:55837699-55837718 | None:intergenic | 35.0% | |
| TATGGAAACCTGGTTTATGT+GGG | - | chr8.4:55839174-55839193 | MS.gene74360:intron | 35.0% | |
| TATTCCTCTGCTATGCTATT+TGG | + | chr8.4:55836521-55836540 | None:intergenic | 35.0% | |
| TCACAAGAACTTCACTATAG+CGG | + | chr8.4:55836557-55836576 | None:intergenic | 35.0% | |
| TCACATACATTATCAGTGTC+AGG | + | chr8.4:55839819-55839838 | None:intergenic | 35.0% | |
| TCCTGATTTCAAAGAGATTG+AGG | - | chr8.4:55839749-55839768 | MS.gene74360:intron | 35.0% | |
| TCTCCACACAAAAATTTACC+AGG | + | chr8.4:55837219-55837238 | None:intergenic | 35.0% | |
| TGAAGAACATTGTATTCAGC+AGG | - | chr8.4:55839280-55839299 | MS.gene74360:intron | 35.0% | |
| TGGACCAAAAAACAGGATAA+AGG | + | chr8.4:55838127-55838146 | None:intergenic | 35.0% | |
| TGTGAACGTTATATGGTCAT+AGG | - | chr8.4:55839834-55839853 | MS.gene74360:intron | 35.0% | |
| TGTGAATGGCAATAACTTGA+GGG | + | chr8.4:55836593-55836612 | None:intergenic | 35.0% | |
| TGTGTGGCATAGTTTATATC+TGG | - | chr8.4:55839691-55839710 | MS.gene74360:intron | 35.0% | |
| TTACAAGGTAATTGGACTCT+GGG | + | chr8.4:55837936-55837955 | None:intergenic | 35.0% | |
| TTACTAAAACATGCAGCAGT+AGG | + | chr8.4:55839153-55839172 | None:intergenic | 35.0% | |
| TTCCACACCAACTAGATAAA+GGG | + | chr8.4:55836131-55836150 | None:intergenic | 35.0% | |
| TTGAGACCTTACAAGGTAAT+TGG | + | chr8.4:55837944-55837963 | None:intergenic | 35.0% | |
| TTTCCACACCAACTAGATAA+AGG | + | chr8.4:55836132-55836151 | None:intergenic | 35.0% | |
| ! | AAATGGTGTTGAGAAGTTGA+AGG | - | chr8.4:55839422-55839441 | MS.gene74360:intron | 35.0% |
| ! | AGTATTTGTTGGTCAAAGTG+TGG | - | chr8.4:55838838-55838857 | MS.gene74360:intron | 35.0% |
| ! | AGTGAATTTTACCAGCAAGA+AGG | + | chr8.4:55835842-55835861 | None:intergenic | 35.0% |
| ! | ATGATGGAAGCTGTGTTATT+TGG | - | chr8.4:55838752-55838771 | MS.gene74360:intron | 35.0% |
| ! | CAAGGTTTGAAGTGTGTATA+AGG | - | chr8.4:55837980-55837999 | MS.gene74360:intron | 35.0% |
| ! | CAATAAGTTGAGGGCAAATT+TGG | + | chr8.4:55837449-55837468 | None:intergenic | 35.0% |
| ! | CATGCATGACAATAAGTTGA+GGG | + | chr8.4:55837458-55837477 | None:intergenic | 35.0% |
| ! | CATGTGCACTTTGTAAGTTT+TGG | - | chr8.4:55836798-55836817 | MS.gene74360:CDS | 35.0% |
| ! | GAGAGCACAAGATTTACATA+TGG | - | chr8.4:55839568-55839587 | MS.gene74360:intron | 35.0% |
| ! | GTCAACTACCTAAACCTTTT+GGG | - | chr8.4:55838377-55838396 | MS.gene74360:intron | 35.0% |
| ! | GTGAATTTTACCAGCAAGAA+GGG | + | chr8.4:55835841-55835860 | None:intergenic | 35.0% |
| ! | GTTTGAAGTGTGTATAAGGA+GGG | - | chr8.4:55837984-55838003 | MS.gene74360:intron | 35.0% |
| ! | GTTTTACGGTAATCCAACTT+TGG | - | chr8.4:55838274-55838293 | MS.gene74360:intron | 35.0% |
| ! | TAACTCTGGATCACCATTTT+CGG | - | chr8.4:55840099-55840118 | MS.gene74360:intron | 35.0% |
| ! | TAGTTGGTGTGGAAAGAAAT+AGG | - | chr8.4:55836137-55836156 | MS.gene74360:CDS | 35.0% |
| ! | TCCACTTAGATTTGCTTCTT+GGG | - | chr8.4:55836734-55836753 | MS.gene74360:CDS | 35.0% |
| ! | TGTCAACTACCTAAACCTTT+TGG | - | chr8.4:55838376-55838395 | MS.gene74360:intron | 35.0% |
| !! | AGAAAAAAGCACCCACAAAT+TGG | + | chr8.4:55836774-55836793 | None:intergenic | 35.0% |
| !! | GAGATTTGTTCCTCGTTTTA+CGG | - | chr8.4:55838260-55838279 | MS.gene74360:intron | 35.0% |
| !! | TAAATAAGCTTTAGGGCGAA+AGG | + | chr8.4:55837514-55837533 | None:intergenic | 35.0% |
| !! | TAAGCTGATTTTGTACGCAA+GGG | - | chr8.4:55837241-55837260 | MS.gene74360:intron | 35.0% |
| !! | TCCTCAATCTCTTTGAAATC+AGG | + | chr8.4:55839753-55839772 | None:intergenic | 35.0% |
| !! | TGATGGAAGCTGTGTTATTT+GGG | - | chr8.4:55838753-55838772 | MS.gene74360:intron | 35.0% |
| !!! | ATTTGGGATTTTGAAGTCAG+GGG | - | chr8.4:55838769-55838788 | MS.gene74360:intron | 35.0% |
| !!! | CACTTTGTAAGTTTTGGGAT+TGG | - | chr8.4:55836804-55836823 | MS.gene74360:CDS | 35.0% |
| !!! | GCTGCATGTTTTAGTAAGTA+TGG | - | chr8.4:55839156-55839175 | MS.gene74360:intron | 35.0% |
| !!! | TAAACCTTTTGGGATGAGTT+TGG | - | chr8.4:55838387-55838406 | MS.gene74360:intron | 35.0% |
| AAAAACACACCCAAATGGGT+AGG | + | chr8.4:55836700-55836719 | None:intergenic | 40.0% | |
| AAAAGCCTATCTTCCTGTTC+AGG | + | chr8.4:55840049-55840068 | None:intergenic | 40.0% | |
| ACAGCCGCATATTTACTACA+AGG | + | chr8.4:55836455-55836474 | None:intergenic | 40.0% | |
| ACAGGAAAAACACACCCAAA+TGG | + | chr8.4:55836705-55836724 | None:intergenic | 40.0% | |
| AGCTTGAATCTGGACTTGAT+TGG | - | chr8.4:55837003-55837022 | MS.gene74360:intron | 40.0% | |
| AGTTGGATTACCGTAAAACG+AGG | + | chr8.4:55838273-55838292 | None:intergenic | 40.0% | |
| ATCTTCCTGTTCAGGAACAT+CGG | + | chr8.4:55840041-55840060 | None:intergenic | 40.0% | |
| ATGTGTTCAATGAAGAACGG+CGG | + | chr8.4:55837748-55837767 | None:intergenic | 40.0% | |
| ATGTTCCTGAACAGGAAGAT+AGG | - | chr8.4:55840041-55840060 | MS.gene74360:intron | 40.0% | |
| ATTTACCAGGCTGCTCTATT+TGG | + | chr8.4:55837206-55837225 | None:intergenic | 40.0% | |
| CAAATTACAGGGGCTATTTG+AGG | + | chr8.4:55836010-55836029 | None:intergenic | 40.0% | |
| CAGAGTCCAATTACCTTGTA+AGG | - | chr8.4:55837935-55837954 | MS.gene74360:intron | 40.0% | |
| CAGGAAAAACACACCCAAAT+GGG | + | chr8.4:55836704-55836723 | None:intergenic | 40.0% | |
| CCAGTTCTCTATGTACTCTT+TGG | + | chr8.4:55839718-55839737 | None:intergenic | 40.0% | |
| CTTACAAGGTAATTGGACTC+TGG | + | chr8.4:55837937-55837956 | None:intergenic | 40.0% | |
| GACCAACAAATACTGGTGAT+GGG | + | chr8.4:55838832-55838851 | None:intergenic | 40.0% | |
| GATGCCACGCTAAATCAATA+AGG | + | chr8.4:55839641-55839660 | None:intergenic | 40.0% | |
| GCAGAAATTGAGACCTTACA+AGG | + | chr8.4:55837951-55837970 | None:intergenic | 40.0% | |
| GCATGCATGACAATAAGTTG+AGG | + | chr8.4:55837459-55837478 | None:intergenic | 40.0% | |
| GCCTTTCCCTTACTGAATTT+CGG | - | chr8.4:55836842-55836861 | MS.gene74360:CDS | 40.0% | |
| GTAAATAACGGCTGCTATAG+TGG | - | chr8.4:55837333-55837352 | MS.gene74360:intron | 40.0% | |
| GTATGGAAACCTGGTTTATG+TGG | - | chr8.4:55839173-55839192 | MS.gene74360:intron | 40.0% | |
| GTGTGAATGGCAATAACTTG+AGG | + | chr8.4:55836594-55836613 | None:intergenic | 40.0% | |
| GTTTATGTGGGAAACTCGAA+AGG | - | chr8.4:55839186-55839205 | MS.gene74360:intron | 40.0% | |
| TAGATAACGTAGCTCTTCCT+CGG | + | chr8.4:55840002-55840021 | None:intergenic | 40.0% | |
| TAGTAAATATGCGGCTGTAG+CGG | - | chr8.4:55836457-55836476 | MS.gene74360:CDS | 40.0% | |
| TAGTGGGATTAGATTTCAGG+AGG | - | chr8.4:55838513-55838532 | MS.gene74360:intron | 40.0% | |
| TCCTAGTGGGATTAGATTTC+AGG | - | chr8.4:55838510-55838529 | MS.gene74360:intron | 40.0% | |
| TCCTGAAATCTAATCCCACT+AGG | + | chr8.4:55838514-55838533 | None:intergenic | 40.0% | |
| TCTGGAAAATCACCTTGCAA+CGG | + | chr8.4:55835756-55835775 | None:intergenic | 40.0% | |
| TGACCAACAAATACTGGTGA+TGG | + | chr8.4:55838833-55838852 | None:intergenic | 40.0% | |
| TTTCATTGATGCAGCTGCAA+TGG | - | chr8.4:55837055-55837074 | MS.gene74360:intron | 40.0% | |
| ! | AGCGGTTTTTGTCCAATTTG+TGG | - | chr8.4:55836759-55836778 | MS.gene74360:CDS | 40.0% |
| ! | ATCACCATTTTCGGAAGAAG+TGG | - | chr8.4:55840108-55840127 | MS.gene74360:intron | 40.0% |
| ! | ATTACCTTCAAGTGGACTTG+AGG | + | chr8.4:55840161-55840180 | None:intergenic | 40.0% |
| ! | CAGCCTGGTAAATTTTTGTG+TGG | - | chr8.4:55837213-55837232 | MS.gene74360:intron | 40.0% |
| ! | CCAAAGAGTACATAGAGAAC+TGG | - | chr8.4:55839715-55839734 | MS.gene74360:intron | 40.0% |
| ! | GCGGTTTTTGTCCAATTTGT+GGG | - | chr8.4:55836760-55836779 | MS.gene74360:CDS | 40.0% |
| ! | GCTCTAACTTCATCTTTTGG+TGG | + | chr8.4:55839369-55839388 | None:intergenic | 40.0% |
| ! | GGTTTGAAGTGTGTATAAGG+AGG | - | chr8.4:55837983-55838002 | MS.gene74360:intron | 40.0% |
| ! | GTCCACTTAGATTTGCTTCT+TGG | - | chr8.4:55836733-55836752 | MS.gene74360:CDS | 40.0% |
| ! | GTTGTGTCTGTTTCTTTGTG+TGG | - | chr8.4:55839675-55839694 | MS.gene74360:intron | 40.0% |
| ! | TACCCTTTATCTAGTTGGTG+TGG | - | chr8.4:55836126-55836145 | MS.gene74360:CDS | 40.0% |
| ! | TAGGGATTTTCGGATGAAAG+CGG | + | chr8.4:55837903-55837922 | None:intergenic | 40.0% |
| ! | TATACTGCTGTTGACTGATG+CGG | - | chr8.4:55835930-55835949 | MS.gene74360:CDS | 40.0% |
| ! | TGAGGAAAATGAGGAGTATG+TGG | - | chr8.4:55839767-55839786 | MS.gene74360:intron | 40.0% |
| !! | AAGCCCTTATTGATTTAGCG+TGG | - | chr8.4:55839634-55839653 | MS.gene74360:intron | 40.0% |
| !! | GGGATGTTTTGAGTGGTAAA+AGG | - | chr8.4:55838905-55838924 | MS.gene74360:intron | 40.0% |
| !! | GTAAGCTGATTTTGTACGCA+AGG | - | chr8.4:55837240-55837259 | MS.gene74360:intron | 40.0% |
| !! | TGGCTTTTTCCAATGACGAT+GGG | - | chr8.4:55837107-55837126 | MS.gene74360:intron | 40.0% |
| !!! | CAGAGTGGATTAGGGATTTT+CGG | + | chr8.4:55837913-55837932 | None:intergenic | 40.0% |
| ACCACTCAAAACATCCCACA+GGG | + | chr8.4:55838902-55838921 | None:intergenic | 45.0% | |
| AGACCTCGCTCAAATTACAG+GGG | + | chr8.4:55836020-55836039 | None:intergenic | 45.0% | |
| ATCATTGGAGCACATGAGAG+AGG | + | chr8.4:55839015-55839034 | None:intergenic | 45.0% | |
| ATGAAGACGAGCTAGCAAAG+GGG | + | chr8.4:55838956-55838975 | None:intergenic | 45.0% | |
| ATTGGGGACAGCAATAACTC+TGG | - | chr8.4:55840085-55840104 | MS.gene74360:intron | 45.0% | |
| CAACACCATTTAGATCACCG+AGG | + | chr8.4:55839413-55839432 | None:intergenic | 45.0% | |
| CAATCGTAGTGGCATTGCAA+TGG | - | chr8.4:55836272-55836291 | MS.gene74360:CDS | 45.0% | |
| CACTGTGACGGCAACAATAA+TGG | - | chr8.4:55836319-55836338 | MS.gene74360:CDS | 45.0% | |
| CAGACCTCGCTCAAATTACA+GGG | + | chr8.4:55836021-55836040 | None:intergenic | 45.0% | |
| CTCCAAATCATCTCTCTGCT+TGG | - | chr8.4:55838984-55839003 | MS.gene74360:intron | 45.0% | |
| CTCCCATCACCAGTATTTGT+TGG | - | chr8.4:55838827-55838846 | MS.gene74360:intron | 45.0% | |
| CTGTATAGTGTGCAACGGTA+TGG | + | chr8.4:55837694-55837713 | None:intergenic | 45.0% | |
| GAAAATCCTTGAAGGGCCTA+AGG | - | chr8.4:55839611-55839630 | MS.gene74360:intron | 45.0% | |
| GACACAACAATTGGACGTAC+AGG | + | chr8.4:55839663-55839682 | None:intergenic | 45.0% | |
| GAGAACCTCGGTGATCTAAA+TGG | - | chr8.4:55839405-55839424 | MS.gene74360:intron | 45.0% | |
| GATGAAGACGAGCTAGCAAA+GGG | + | chr8.4:55838957-55838976 | None:intergenic | 45.0% | |
| GATGTTGAAGATCCGTTGCA+AGG | - | chr8.4:55835741-55835760 | MS.gene74360:CDS | 45.0% | |
| GCCCAAGAAGCAAATCTAAG+TGG | + | chr8.4:55836738-55836757 | None:intergenic | 45.0% | |
| GCCGAAATTCAGTAAGGGAA+AGG | + | chr8.4:55836846-55836865 | None:intergenic | 45.0% | |
| GCTACCACTTCTTCCGAAAA+TGG | + | chr8.4:55840115-55840134 | None:intergenic | 45.0% | |
| GCTGAATTGAACGAGAACCT+CGG | - | chr8.4:55839393-55839412 | MS.gene74360:intron | 45.0% | |
| GGACAGCCGAAATTCAGTAA+GGG | + | chr8.4:55836851-55836870 | None:intergenic | 45.0% | |
| GTTGAGAAGTTGAAGGCTGT+AGG | - | chr8.4:55839429-55839448 | MS.gene74360:intron | 45.0% | |
| TACCACTCAAAACATCCCAC+AGG | + | chr8.4:55838903-55838922 | None:intergenic | 45.0% | |
| TAGTGGCATTGCAATGGCAA+AGG | - | chr8.4:55836278-55836297 | MS.gene74360:CDS | 45.0% | |
| TCAGACCTCGCTCAAATTAC+AGG | + | chr8.4:55836022-55836041 | None:intergenic | 45.0% | |
| TCGAGTTTCCCACATAAACC+AGG | + | chr8.4:55839185-55839204 | None:intergenic | 45.0% | |
| TCGGAAGAAGTGGTAGCAAA+TGG | - | chr8.4:55840118-55840137 | MS.gene74360:intron | 45.0% | |
| TCTCCATCACCACTGAAACA+GGG | + | chr8.4:55839519-55839538 | None:intergenic | 45.0% | |
| TCTGTCTCTGACAAACCAAG+TGG | - | chr8.4:55839075-55839094 | MS.gene74360:intron | 45.0% | |
| TCTTCCTGTTCAGGAACATC+GGG | + | chr8.4:55840040-55840059 | None:intergenic | 45.0% | |
| TGACAAGTCGTTATCCCTGT+GGG | - | chr8.4:55838885-55838904 | MS.gene74360:intron | 45.0% | |
| TGACATTGTGACAGTCGAGA+AGG | - | chr8.4:55839949-55839968 | MS.gene74360:intron | 45.0% | |
| TGATGTGTGTGCAATCGTAG+TGG | - | chr8.4:55836261-55836280 | MS.gene74360:CDS | 45.0% | |
| TGCCAAGCAGAGAGATGATT+TGG | + | chr8.4:55838989-55839008 | None:intergenic | 45.0% | |
| TGCGGAGGAATCATAATCTC+TGG | - | chr8.4:55837087-55837106 | MS.gene74360:intron | 45.0% | |
| TGTATAAGGAGGGAGAGTCT+AGG | - | chr8.4:55837994-55838013 | MS.gene74360:intron | 45.0% | |
| TGTATTGCTTTCAATCGCCG+CGG | - | chr8.4:55835813-55835832 | MS.gene74360:intron | 45.0% | |
| TGTTCAGGAACATCGGGAAT+GGG | + | chr8.4:55840034-55840053 | None:intergenic | 45.0% | |
| TTTGCTAGCTCGTCTTCATC+CGG | - | chr8.4:55838957-55838976 | MS.gene74360:intron | 45.0% | |
| ! | AATCACGAAAGTGCACTGGA+AGG | - | chr8.4:55839491-55839510 | MS.gene74360:intron | 45.0% |
| ! | AGATTTGCTTCTTGGGCTAG+CGG | - | chr8.4:55836741-55836760 | MS.gene74360:CDS | 45.0% |
| ! | AGCGGAGAGTATGCCTAATT+TGG | + | chr8.4:55837885-55837904 | None:intergenic | 45.0% |
| ! | CAAGCAGAGAGATGATTTGG+AGG | + | chr8.4:55838986-55839005 | None:intergenic | 45.0% |
| ! | CTGCAATGGCATTGCTATTG+CGG | - | chr8.4:55837069-55837088 | MS.gene74360:intron | 45.0% |
| ! | GGTGTGTTTTTCCTGTGATG+CGG | - | chr8.4:55836709-55836728 | MS.gene74360:CDS | 45.0% |
| ! | GTCGATTGGCTGCCTTAATT+AGG | - | chr8.4:55837809-55837828 | MS.gene74360:intron | 45.0% |
| ! | GTCTAGGACTCCATGATACT+CGG | - | chr8.4:55838010-55838029 | MS.gene74360:intron | 45.0% |
| ! | TCTAGGACTCCATGATACTC+GGG | - | chr8.4:55838011-55838030 | MS.gene74360:intron | 45.0% |
| !! | CTGGCTTTTTCCAATGACGA+TGG | - | chr8.4:55837106-55837125 | MS.gene74360:intron | 45.0% |
| !! | GCTTTTTCCAATGACGATGG+GGG | - | chr8.4:55837109-55837128 | MS.gene74360:intron | 45.0% |
| !! | GGCTTTTTCCAATGACGATG+GGG | - | chr8.4:55837108-55837127 | MS.gene74360:intron | 45.0% |
| !! | TTTCAGTGGTGATGGAGAGT+GGG | - | chr8.4:55839521-55839540 | MS.gene74360:intron | 45.0% |
| !!! | CCTTTTGGGATGAGTTTGGT+CGG | - | chr8.4:55838391-55838410 | MS.gene74360:intron | 45.0% |
| !!! | GCACAGCATTTTTTGTGCAG+TGG | - | chr8.4:55837360-55837379 | MS.gene74360:intron | 45.0% |
| AAACCCTGTCTCACGCAACA+AGG | - | chr8.4:55839101-55839120 | MS.gene74360:intron | 50.0% | |
| AACACACCCAAATGGGTAGG+CGG | + | chr8.4:55836697-55836716 | None:intergenic | 50.0% | |
| AACCCTGTCTCACGCAACAA+GGG | - | chr8.4:55839102-55839121 | MS.gene74360:intron | 50.0% | |
| AACCCTTGTTGCGTGAGACA+GGG | + | chr8.4:55839107-55839126 | None:intergenic | 50.0% | |
| ACATGCAGCAGTAGGTGTGA+AGG | + | chr8.4:55839145-55839164 | None:intergenic | 50.0% | |
| ACTCACAGTCTCGTAGCAGT+CGG | + | chr8.4:55837036-55837055 | None:intergenic | 50.0% | |
| ACTCCATGATACTCGGGGTA+TGG | - | chr8.4:55838017-55838036 | MS.gene74360:intron | 50.0% | |
| AGTAAAGATGGTGAGGTGCG+TGG | - | chr8.4:55839228-55839247 | MS.gene74360:intron | 50.0% | |
| ATCCCATACCCCGAGTATCA+TGG | + | chr8.4:55838023-55838042 | None:intergenic | 50.0% | |
| CATGCCTCAAGTCCACTTGA+AGG | - | chr8.4:55840154-55840173 | MS.gene74360:intron | 50.0% | |
| CATTCCCGATGTTCCTGAAC+AGG | - | chr8.4:55840033-55840052 | MS.gene74360:intron | 50.0% | |
| CCGACCAAACTCATCCCAAA+AGG | + | chr8.4:55838394-55838413 | None:intergenic | 50.0% | |
| CGTGGCATGGTTTCTATCTC+TGG | - | chr8.4:55839246-55839265 | MS.gene74360:intron | 50.0% | |
| CTAGGACTCCATGATACTCG+GGG | - | chr8.4:55838012-55838031 | MS.gene74360:intron | 50.0% | |
| CTCCATGATACTCGGGGTAT+GGG | - | chr8.4:55838018-55838037 | MS.gene74360:intron | 50.0% | |
| CTCTCCATCACCACTGAAAC+AGG | + | chr8.4:55839520-55839539 | None:intergenic | 50.0% | |
| CTGACAAGTCGTTATCCCTG+TGG | - | chr8.4:55838884-55838903 | MS.gene74360:intron | 50.0% | |
| CTGTTCAGGAACATCGGGAA+TGG | + | chr8.4:55840035-55840054 | None:intergenic | 50.0% | |
| GAATCAGCTGGCTGCAATGA+TGG | - | chr8.4:55838736-55838755 | MS.gene74360:intron | 50.0% | |
| GCAGCCAAATAGCATAGCAG+AGG | - | chr8.4:55836514-55836533 | MS.gene74360:CDS | 50.0% | |
| GGATGAAGACGAGCTAGCAA+AGG | + | chr8.4:55838958-55838977 | None:intergenic | 50.0% | |
| GGCATGGTTTCTATCTCTGG+TGG | - | chr8.4:55839249-55839268 | MS.gene74360:intron | 50.0% | |
| GGCGTGACATTACCTTCAAG+TGG | + | chr8.4:55840169-55840188 | None:intergenic | 50.0% | |
| GGGACAGCCGAAATTCAGTA+AGG | + | chr8.4:55836852-55836871 | None:intergenic | 50.0% | |
| TAATTGGACTCTGGGCAGAG+TGG | + | chr8.4:55837928-55837947 | None:intergenic | 50.0% | |
| TAGCCCCTGTAATTTGAGCG+AGG | - | chr8.4:55836014-55836033 | MS.gene74360:CDS | 50.0% | |
| TGAGAACCGCCTACCCATTT+GGG | - | chr8.4:55836688-55836707 | MS.gene74360:CDS | 50.0% | |
| TTCTGCCAAATAGAGCAGCC+TGG | - | chr8.4:55837198-55837217 | MS.gene74360:intron | 50.0% | |
| TTGCTAGCTCGTCTTCATCC+GGG | - | chr8.4:55838958-55838977 | MS.gene74360:intron | 50.0% | |
| TTGTTGCGTGAGACAGGGTT+TGG | + | chr8.4:55839102-55839121 | None:intergenic | 50.0% | |
| ! | AGAGATGATTTGGAGGACCC+CGG | + | chr8.4:55838979-55838998 | None:intergenic | 50.0% |
| ! | CAATGGCATTGCTATTGCGG+AGG | - | chr8.4:55837072-55837091 | MS.gene74360:intron | 50.0% |
| ! | CTTCAAGTGGACTTGAGGCA+TGG | + | chr8.4:55840156-55840175 | None:intergenic | 50.0% |
| ! | TCACGCAACAAGGGTTCTGA+TGG | - | chr8.4:55839111-55839130 | MS.gene74360:intron | 50.0% |
| !! | ACTCTGGGCAGAGTGGATTA+GGG | + | chr8.4:55837921-55837940 | None:intergenic | 50.0% |
| !! | GTTGGTGGTTCTGCTAGCAA+AGG | - | chr8.4:55839546-55839565 | MS.gene74360:intron | 50.0% |
| !! | GTTTCAGTGGTGATGGAGAG+TGG | - | chr8.4:55839520-55839539 | MS.gene74360:intron | 50.0% |
| !! | TCCCTGTGGGATGTTTTGAG+TGG | - | chr8.4:55838898-55838917 | MS.gene74360:intron | 50.0% |
| !!! | TGGGATTGGCTGCTGTTTTG+TGG | - | chr8.4:55836818-55836837 | MS.gene74360:CDS | 50.0% |
| ACACAGACCCCCATCGTCAT+TGG | + | chr8.4:55837119-55837138 | None:intergenic | 55.0% | |
| ACATCGGGAATGGGAGACAC+TGG | + | chr8.4:55840025-55840044 | None:intergenic | 55.0% | |
| CAGCGACTCTGATATGTCCG+AGG | - | chr8.4:55839982-55840001 | MS.gene74360:intron | 55.0% | |
| CTAAGTGGACACCGCATCAC+AGG | + | chr8.4:55836723-55836742 | None:intergenic | 55.0% | |
| CTGAGAACCGCCTACCCATT+TGG | - | chr8.4:55836687-55836706 | MS.gene74360:CDS | 55.0% | |
| GAACCCTTGTTGCGTGAGAC+AGG | + | chr8.4:55839108-55839127 | None:intergenic | 55.0% | |
| GCACCCTGTTTCAGTGGTGA+TGG | - | chr8.4:55839513-55839532 | MS.gene74360:intron | 55.0% | |
| GGGTTTCTGCTGGTGACTGT+GGG | - | chr8.4:55836362-55836381 | MS.gene74360:CDS | 55.0% | |
| GTTGACTGATGCGGCGAATC+CGG | - | chr8.4:55835939-55835958 | MS.gene74360:CDS | 55.0% | |
| TGCAGCAGTAGGTGTGAAGG+AGG | + | chr8.4:55839142-55839161 | None:intergenic | 55.0% | |
| TGCTAGCTCGTCTTCATCCG+GGG | - | chr8.4:55838959-55838978 | MS.gene74360:intron | 55.0% | |
| TGGGTTTCTGCTGGTGACTG+TGG | - | chr8.4:55836361-55836380 | MS.gene74360:CDS | 55.0% | |
| ! | GACTCTGGGCAGAGTGGATT+AGG | + | chr8.4:55837922-55837941 | None:intergenic | 55.0% |
| ! | GAGACAGGGTTTGGTCCACT+TGG | + | chr8.4:55839093-55839112 | None:intergenic | 55.0% |
| !! | GATGGAGAGTGGGTTGTTGG+TGG | - | chr8.4:55839531-55839550 | MS.gene74360:intron | 55.0% |
| !! | GGTGATGGAGAGTGGGTTGT+TGG | - | chr8.4:55839528-55839547 | MS.gene74360:intron | 55.0% |
| !! | TACCAGCAAGAAGGGTACCG+CGG | + | chr8.4:55835833-55835852 | None:intergenic | 55.0% |
| !! | TGGAAGGCACCCTGTTTCAG+TGG | - | chr8.4:55839507-55839526 | MS.gene74360:intron | 55.0% |
| AGATGGTGAGGTGCGTGGCA+TGG | - | chr8.4:55839233-55839252 | MS.gene74360:intron | 60.0% | |
| GGGCTTCCTTAGGCCCTTCA+AGG | + | chr8.4:55839620-55839639 | None:intergenic | 60.0% | |
| CGCCGCGGTACCCTTCTTGC+TGG | - | chr8.4:55835828-55835847 | MS.gene74360:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 55835493 | 55840207 | 55835493 | ID=MS.gene74360 |
| chr8.4 | mRNA | 55835493 | 55840207 | 55835493 | ID=MS.gene74360.t1;Parent=MS.gene74360 |
| chr8.4 | exon | 55840189 | 55840207 | 55840189 | ID=MS.gene74360.t1.exon1;Parent=MS.gene74360.t1 |
| chr8.4 | CDS | 55840189 | 55840207 | 55840189 | ID=cds.MS.gene74360.t1;Parent=MS.gene74360.t1 |
| chr8.4 | exon | 55839851 | 55839949 | 55839851 | ID=MS.gene74360.t1.exon2;Parent=MS.gene74360.t1 |
| chr8.4 | CDS | 55839851 | 55839949 | 55839851 | ID=cds.MS.gene74360.t1;Parent=MS.gene74360.t1 |
| chr8.4 | exon | 55835870 | 55836957 | 55835870 | ID=MS.gene74360.t1.exon3;Parent=MS.gene74360.t1 |
| chr8.4 | CDS | 55835870 | 55836957 | 55835870 | ID=cds.MS.gene74360.t1;Parent=MS.gene74360.t1 |
| chr8.4 | exon | 55835493 | 55835786 | 55835493 | ID=MS.gene74360.t1.exon4;Parent=MS.gene74360.t1 |
| chr8.4 | CDS | 55835493 | 55835786 | 55835493 | ID=cds.MS.gene74360.t1;Parent=MS.gene74360.t1 |
| Gene Sequence |
| Protein sequence |
