Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75444.t1 | XP_003602014.1 | 87.3 | 284 | 36 | 0 | 1 | 284 | 1 | 284 | 1.50E-135 | 492.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75444.t1 | G4N286 | 31.5 | 270 | 178 | 5 | 17 | 283 | 10 | 275 | 2.2e-29 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75444.t1 | G7J4E2 | 87.3 | 284 | 36 | 0 | 1 | 284 | 1 | 284 | 1.1e-135 | 492.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene75444 | 0.817867 | 2.64E-52 | -1.69E-46 |
| MS.gene049232 | MS.gene75444 | 0.827315 | 1.67E-54 | -1.69E-46 |
| MS.gene050518 | MS.gene75444 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene050772 | MS.gene75444 | 0.806438 | 8.23E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene75444 | 0.812599 | 3.91E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene75444 | 0.819419 | 1.17E-52 | -1.69E-46 |
| MS.gene058719 | MS.gene75444 | 0.80652 | 7.91E-50 | -1.69E-46 |
| MS.gene059865 | MS.gene75444 | 0.802062 | 6.70E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75444 | MS.gene75445 | PPI |
| MS.gene75444 | MS.gene013841 | PPI |
| MS.gene75444 | MS.gene013839 | PPI |
| MS.gene75444 | MS.gene045080 | PPI |
| MS.gene75444 | MS.gene015282 | PPI |
| MS.gene75444 | MS.gene09624 | PPI |
| MS.gene75444 | MS.gene43514 | PPI |
| MS.gene045080 | MS.gene75444 | PPI |
| MS.gene75444 | MS.gene013840 | PPI |
| MS.gene75444 | MS.gene013838 | PPI |
| MS.gene75444 | MS.gene045079 | PPI |
| MS.gene013841 | MS.gene75444 | PPI |
| MS.gene75444 | MS.gene052246 | PPI |
| MS.gene75444 | MS.gene052244 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75444.t1 | MTR_3g087850 | 89.399 | 283 | 30 | 0 | 1 | 283 | 16 | 298 | 0.0 | 530 |
| MS.gene75444.t1 | MTR_3g087860 | 91.901 | 284 | 23 | 0 | 1 | 284 | 1 | 284 | 0.0 | 522 |
| MS.gene75444.t1 | MTR_4g097510 | 47.015 | 268 | 139 | 2 | 13 | 278 | 4 | 270 | 1.48e-85 | 257 |
| MS.gene75444.t1 | MTR_3g085740 | 33.505 | 194 | 122 | 3 | 8 | 195 | 72 | 264 | 2.26e-23 | 97.8 |
| MS.gene75444.t1 | MTR_4g058840 | 36.041 | 197 | 111 | 7 | 15 | 198 | 15 | 209 | 7.88e-23 | 95.1 |
| MS.gene75444.t1 | MTR_4g058820 | 36.041 | 197 | 111 | 7 | 15 | 198 | 15 | 209 | 7.88e-23 | 95.1 |
| MS.gene75444.t1 | MTR_4g058810 | 35.025 | 197 | 113 | 7 | 15 | 198 | 15 | 209 | 1.90e-21 | 91.7 |
| MS.gene75444.t1 | MTR_8g096580 | 33.679 | 193 | 117 | 6 | 12 | 196 | 46 | 235 | 2.47e-19 | 86.7 |
| MS.gene75444.t1 | MTR_1g051165 | 31.863 | 204 | 121 | 6 | 9 | 195 | 12 | 214 | 8.66e-19 | 84.3 |
| MS.gene75444.t1 | MTR_8g096620 | 29.502 | 261 | 161 | 10 | 15 | 263 | 49 | 298 | 3.27e-18 | 83.6 |
| MS.gene75444.t1 | MTR_7g080410 | 28.881 | 277 | 154 | 11 | 2 | 267 | 31 | 275 | 6.31e-17 | 79.7 |
| MS.gene75444.t1 | MTR_4g052350 | 32.086 | 187 | 105 | 5 | 15 | 188 | 18 | 195 | 1.37e-16 | 78.2 |
| MS.gene75444.t1 | MTR_4g052320 | 30.890 | 191 | 123 | 5 | 4 | 188 | 2 | 189 | 1.73e-16 | 77.8 |
| MS.gene75444.t1 | MTR_7g080410 | 32.653 | 196 | 118 | 7 | 15 | 199 | 42 | 234 | 1.76e-16 | 78.2 |
| MS.gene75444.t1 | MTR_4g052300 | 31.667 | 180 | 115 | 4 | 15 | 188 | 12 | 189 | 1.90e-16 | 77.4 |
| MS.gene75444.t1 | MTR_3g086210 | 30.808 | 198 | 113 | 7 | 17 | 197 | 57 | 247 | 1.25e-15 | 75.9 |
| MS.gene75444.t1 | MTR_7g105590 | 30.769 | 182 | 120 | 4 | 15 | 191 | 12 | 192 | 1.97e-15 | 73.6 |
| MS.gene75444.t1 | MTR_4g052340 | 29.444 | 180 | 119 | 4 | 15 | 188 | 18 | 195 | 2.61e-15 | 74.3 |
| MS.gene75444.t1 | MTR_1563s0010 | 35.294 | 187 | 107 | 5 | 16 | 190 | 114 | 298 | 8.14e-15 | 74.3 |
| MS.gene75444.t1 | MTR_7g113650 | 30.198 | 202 | 116 | 7 | 11 | 191 | 33 | 230 | 7.17e-14 | 70.9 |
| MS.gene75444.t1 | MTR_7g110140 | 30.151 | 199 | 130 | 6 | 15 | 208 | 10 | 204 | 9.08e-14 | 70.1 |
| MS.gene75444.t1 | MTR_4g134660 | 32.275 | 189 | 117 | 6 | 16 | 195 | 11 | 197 | 1.22e-13 | 69.3 |
| MS.gene75444.t1 | MTR_2g022600 | 32.967 | 182 | 108 | 4 | 16 | 188 | 38 | 214 | 1.39e-13 | 70.5 |
| MS.gene75444.t1 | MTR_4g066050 | 29.798 | 198 | 126 | 6 | 9 | 195 | 22 | 217 | 8.47e-13 | 67.0 |
| MS.gene75444.t1 | MTR_3g113870 | 26.230 | 183 | 127 | 3 | 17 | 193 | 26 | 206 | 1.12e-12 | 66.6 |
| MS.gene75444.t1 | MTR_6g035395 | 31.148 | 183 | 111 | 5 | 9 | 188 | 3 | 173 | 1.66e-12 | 66.2 |
| MS.gene75444.t1 | MTR_7g071680 | 29.947 | 187 | 124 | 3 | 15 | 195 | 33 | 218 | 3.69e-12 | 65.9 |
| MS.gene75444.t1 | MTR_7g107670 | 27.184 | 206 | 140 | 5 | 15 | 213 | 37 | 239 | 4.26e-12 | 65.5 |
| MS.gene75444.t1 | MTR_7g076660 | 32.450 | 151 | 83 | 3 | 17 | 149 | 11 | 160 | 8.38e-12 | 64.7 |
| MS.gene75444.t1 | MTR_7g076660 | 32.450 | 151 | 83 | 3 | 17 | 149 | 10 | 159 | 8.40e-12 | 64.7 |
| MS.gene75444.t1 | MTR_6g023590 | 27.604 | 192 | 125 | 6 | 12 | 193 | 14 | 201 | 3.49e-11 | 62.8 |
| MS.gene75444.t1 | MTR_7g063390 | 30.709 | 127 | 87 | 1 | 66 | 191 | 75 | 201 | 6.35e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene75444.t1 | AT5G10050 | 66.912 | 272 | 90 | 0 | 11 | 282 | 5 | 276 | 1.19e-142 | 402 |
| MS.gene75444.t1 | AT5G65205 | 65.683 | 271 | 93 | 0 | 11 | 281 | 6 | 276 | 4.89e-141 | 399 |
| MS.gene75444.t1 | AT3G03330 | 27.985 | 268 | 159 | 6 | 15 | 270 | 45 | 290 | 3.91e-22 | 94.4 |
| MS.gene75444.t1 | AT5G50600 | 30.851 | 188 | 120 | 5 | 15 | 195 | 49 | 233 | 2.03e-21 | 92.8 |
| MS.gene75444.t1 | AT5G50700 | 30.851 | 188 | 120 | 5 | 15 | 195 | 49 | 233 | 2.03e-21 | 92.8 |
| MS.gene75444.t1 | AT2G17845 | 33.831 | 201 | 117 | 7 | 10 | 195 | 46 | 245 | 6.77e-19 | 85.1 |
| MS.gene75444.t1 | AT1G10310 | 32.843 | 204 | 124 | 6 | 16 | 209 | 20 | 220 | 7.88e-19 | 84.0 |
| MS.gene75444.t1 | AT3G55310 | 33.333 | 198 | 119 | 6 | 10 | 195 | 16 | 212 | 2.60e-18 | 83.2 |
| MS.gene75444.t1 | AT1G24360 | 32.990 | 194 | 123 | 4 | 8 | 195 | 71 | 263 | 6.39e-18 | 82.4 |
| MS.gene75444.t1 | AT1G62610 | 31.658 | 199 | 122 | 6 | 10 | 195 | 12 | 209 | 8.02e-18 | 81.6 |
| MS.gene75444.t1 | AT1G62610 | 31.658 | 199 | 122 | 6 | 10 | 195 | 13 | 210 | 8.72e-18 | 81.6 |
| MS.gene75444.t1 | AT1G62610 | 31.658 | 199 | 122 | 6 | 10 | 195 | 18 | 215 | 9.06e-18 | 81.6 |
| MS.gene75444.t1 | AT1G62610 | 31.658 | 199 | 122 | 6 | 10 | 195 | 14 | 211 | 9.29e-18 | 81.6 |
| MS.gene75444.t1 | AT1G63380 | 30.653 | 199 | 124 | 6 | 10 | 195 | 14 | 211 | 1.56e-17 | 80.9 |
| MS.gene75444.t1 | AT1G63380 | 30.653 | 199 | 124 | 6 | 10 | 195 | 18 | 215 | 1.59e-17 | 80.9 |
| MS.gene75444.t1 | AT1G63380 | 30.653 | 199 | 124 | 6 | 10 | 195 | 21 | 218 | 1.70e-17 | 80.9 |
| MS.gene75444.t1 | AT1G63380 | 30.653 | 199 | 124 | 6 | 10 | 195 | 16 | 213 | 1.73e-17 | 80.9 |
| MS.gene75444.t1 | AT3G55290 | 32.323 | 198 | 121 | 6 | 10 | 195 | 17 | 213 | 2.94e-17 | 80.1 |
| MS.gene75444.t1 | AT3G55290 | 32.323 | 198 | 121 | 6 | 10 | 195 | 16 | 212 | 2.96e-17 | 80.1 |
| MS.gene75444.t1 | AT3G47360 | 29.000 | 200 | 128 | 6 | 5 | 195 | 39 | 233 | 9.56e-17 | 79.0 |
| MS.gene75444.t1 | AT5G50690 | 30.332 | 211 | 135 | 7 | 15 | 218 | 49 | 254 | 2.55e-16 | 77.8 |
| MS.gene75444.t1 | AT5G50590 | 30.332 | 211 | 135 | 7 | 15 | 218 | 49 | 254 | 2.55e-16 | 77.8 |
| MS.gene75444.t1 | AT5G50690 | 31.937 | 191 | 118 | 7 | 15 | 198 | 49 | 234 | 7.91e-16 | 75.5 |
| MS.gene75444.t1 | AT5G50590 | 31.937 | 191 | 118 | 7 | 15 | 198 | 49 | 234 | 7.91e-16 | 75.5 |
| MS.gene75444.t1 | AT1G52340 | 31.019 | 216 | 134 | 6 | 15 | 218 | 22 | 234 | 1.41e-15 | 75.5 |
| MS.gene75444.t1 | AT1G54870 | 31.863 | 204 | 118 | 6 | 5 | 191 | 73 | 272 | 2.48e-15 | 75.5 |
| MS.gene75444.t1 | AT1G54870 | 31.863 | 204 | 118 | 6 | 5 | 191 | 75 | 274 | 2.61e-15 | 75.5 |
| MS.gene75444.t1 | AT3G46170 | 30.808 | 198 | 124 | 7 | 10 | 195 | 25 | 221 | 6.57e-15 | 73.6 |
| MS.gene75444.t1 | AT3G05260 | 30.526 | 190 | 115 | 4 | 15 | 191 | 41 | 226 | 1.62e-14 | 72.4 |
| MS.gene75444.t1 | AT3G47350 | 27.895 | 190 | 123 | 6 | 15 | 195 | 48 | 232 | 1.98e-14 | 72.4 |
| MS.gene75444.t1 | AT1G67730 | 29.353 | 201 | 108 | 6 | 17 | 195 | 55 | 243 | 2.05e-14 | 72.4 |
| MS.gene75444.t1 | AT3G03350 | 41.176 | 85 | 50 | 0 | 109 | 193 | 182 | 266 | 3.14e-14 | 71.6 |
| MS.gene75444.t1 | AT5G50770 | 30.851 | 188 | 120 | 5 | 15 | 195 | 49 | 233 | 3.45e-14 | 72.0 |
| MS.gene75444.t1 | AT3G03350 | 41.176 | 85 | 50 | 0 | 109 | 193 | 268 | 352 | 4.35e-14 | 72.0 |
| MS.gene75444.t1 | AT3G47350 | 27.895 | 190 | 123 | 6 | 15 | 195 | 48 | 232 | 4.60e-14 | 71.6 |
| MS.gene75444.t1 | AT2G47130 | 30.612 | 196 | 127 | 5 | 6 | 195 | 2 | 194 | 2.85e-13 | 68.6 |
| MS.gene75444.t1 | AT4G03140 | 28.495 | 186 | 124 | 4 | 15 | 194 | 82 | 264 | 1.11e-12 | 67.8 |
| MS.gene75444.t1 | AT3G26770 | 25.604 | 207 | 139 | 6 | 15 | 211 | 45 | 246 | 1.13e-12 | 67.4 |
| MS.gene75444.t1 | AT3G51680 | 31.100 | 209 | 129 | 5 | 1 | 195 | 20 | 227 | 1.36e-12 | 67.0 |
| MS.gene75444.t1 | AT3G29250 | 29.648 | 199 | 131 | 5 | 3 | 195 | 35 | 230 | 2.53e-12 | 66.2 |
| MS.gene75444.t1 | AT3G29260 | 30.348 | 201 | 126 | 6 | 11 | 205 | 7 | 199 | 3.83e-12 | 65.5 |
| MS.gene75444.t1 | AT3G29250 | 29.592 | 196 | 129 | 5 | 6 | 195 | 2 | 194 | 8.12e-12 | 64.3 |
| MS.gene75444.t1 | AT3G29250 | 29.843 | 191 | 125 | 5 | 11 | 195 | 45 | 232 | 1.06e-11 | 64.7 |
| MS.gene75444.t1 | AT4G10020 | 26.482 | 253 | 157 | 10 | 15 | 254 | 51 | 287 | 1.30e-11 | 64.7 |
| MS.gene75444.t1 | AT4G20760 | 26.667 | 225 | 133 | 10 | 15 | 212 | 45 | 264 | 1.64e-11 | 63.9 |
| MS.gene75444.t1 | AT4G20760 | 26.667 | 225 | 133 | 10 | 15 | 212 | 65 | 284 | 1.78e-11 | 63.9 |
| MS.gene75444.t1 | AT5G51030 | 33.784 | 148 | 88 | 6 | 12 | 152 | 36 | 180 | 3.04e-11 | 63.2 |
| MS.gene75444.t1 | AT3G06060 | 29.944 | 177 | 118 | 3 | 17 | 188 | 43 | 218 | 4.24e-11 | 62.8 |
| MS.gene75444.t1 | AT3G06060 | 29.944 | 177 | 118 | 3 | 17 | 188 | 60 | 235 | 4.80e-11 | 62.8 |
Find 73 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTGGAACTTGGAAATTT+TGG | 0.076726 | 3.3:-73147180 | MS.gene75444:CDS |
| AGTTCTTGAAGAAAGAATTT+AGG | 0.187004 | 3.3:+73149856 | None:intergenic |
| ACGTTTGATACTAACGTATT+TGG | 0.203077 | 3.3:-73149691 | MS.gene75444:intron |
| AATAATGTTCTAGATAAATT+TGG | 0.248184 | 3.3:-73149796 | MS.gene75444:CDS |
| CGTTAGTATCAAACGTGTTT+TGG | 0.252956 | 3.3:+73149698 | None:intergenic |
| ATGCTTTGACAGATACATTA+AGG | 0.281542 | 3.3:-73148933 | MS.gene75444:intron |
| GTTCTTGAAGAAAGAATTTA+GGG | 0.282188 | 3.3:+73149857 | None:intergenic |
| ACGTTCAACCATGGCGGATT+TGG | 0.307727 | 3.3:-73149887 | MS.gene75444:CDS |
| AAGTCAAATATTGGAAATTC+CGG | 0.338697 | 3.3:-73147123 | MS.gene75444:CDS |
| TCACATGGCAACTAGGAAAC+AGG | 0.363828 | 3.3:-73149040 | MS.gene75444:CDS |
| AGTGTTGCTGGGTTGGCATC+TGG | 0.375364 | 3.3:-73148997 | MS.gene75444:CDS |
| CTCTAACACAGAGAGGTAAA+TGG | 0.378798 | 3.3:+73146896 | None:intergenic |
| CTCCGGCATGCGGTTGTAGA+TGG | 0.385536 | 3.3:+73147095 | None:intergenic |
| TCTCGGATTGCTGCTTCAAA+TGG | 0.389909 | 3.3:+73147057 | None:intergenic |
| GGAGCTGTGAAGTCAAATAT+TGG | 0.400907 | 3.3:-73147132 | MS.gene75444:CDS |
| GTTAACGTTGGAAGTGTTGC+TGG | 0.406103 | 3.3:-73149009 | MS.gene75444:CDS |
| CTGGGTTGGCATCTGGACCT+TGG | 0.422583 | 3.3:-73148990 | MS.gene75444:CDS |
| CAGCCATGACAGTAGAATAA+TGG | 0.425148 | 3.3:+73146926 | None:intergenic |
| GGTTGCAGCGGAGGAGGTAT+AGG | 0.425422 | 3.3:-73149970 | MS.gene75444:CDS |
| ATATTTGACTTCACAGCTCC+AGG | 0.429584 | 3.3:+73147135 | None:intergenic |
| CGTTTAGCAAACTCGTCTGT+AGG | 0.435097 | 3.3:+73147000 | None:intergenic |
| GCACCGTAGCTGCTGTCCTT+AGG | 0.465314 | 3.3:-73146978 | MS.gene75444:CDS |
| AACTCTGTTCACGCTTTCAT+CGG | 0.468082 | 3.3:+73149822 | None:intergenic |
| GTTTAGCAAACTCGTCTGTA+GGG | 0.475638 | 3.3:+73147001 | None:intergenic |
| CGTTGGAAGTGTTGCTGGGT+TGG | 0.478666 | 3.3:-73149004 | MS.gene75444:CDS |
| TCAACAAACAGATTGGAACT+TGG | 0.486654 | 3.3:-73147189 | MS.gene75444:intron |
| ATGCAGGTGGTTTCTTCCTA+AGG | 0.489801 | 3.3:+73146962 | None:intergenic |
| AAACCAGTGGTTCTCATCAC+AGG | 0.491991 | 3.3:-73149991 | MS.gene75444:CDS |
| TTGGCATCTGGACCTTGGAA+TGG | 0.498857 | 3.3:-73148985 | MS.gene75444:CDS |
| ATCACAGGTTGCAGCGGAGG+AGG | 0.503558 | 3.3:-73149976 | MS.gene75444:CDS |
| AGGAACCATGAGAATGGTCC+AGG | 0.505024 | 3.3:-73149073 | MS.gene75444:CDS |
| TTTGCAGCTGTTAGCTGCGA+AGG | 0.507590 | 3.3:+73149930 | None:intergenic |
| TAGTTCCTCACATGGCAACT+AGG | 0.516282 | 3.3:-73149047 | MS.gene75444:CDS |
| GCAAAGTGGTTGCAACCAGC+AGG | 0.517343 | 3.3:-73149912 | MS.gene75444:CDS |
| CTTCCTAAGGACAGCAGCTA+CGG | 0.519587 | 3.3:+73146975 | None:intergenic |
| GCGGTTGTAGATGGCTATGC+CGG | 0.519784 | 3.3:+73147104 | None:intergenic |
| CTCATCACAGGTTGCAGCGG+AGG | 0.528829 | 3.3:-73149979 | MS.gene75444:CDS |
| CCATGTGAGGAACTACAGCC+TGG | 0.541278 | 3.3:+73149055 | None:intergenic |
| AACGCTGGTGTTCTTTGTGT+GGG | 0.556188 | 3.3:-73149751 | MS.gene75444:CDS |
| CATGGTTGAACGTGACCTGC+TGG | 0.557065 | 3.3:+73149897 | None:intergenic |
| TAACGCTGGTGTTCTTTGTG+TGG | 0.562477 | 3.3:-73149752 | MS.gene75444:CDS |
| CAACCTGTGATGAGAACCAC+TGG | 0.563963 | 3.3:+73149988 | None:intergenic |
| TGGCCATTATTCTACTGTCA+TGG | 0.567137 | 3.3:-73146929 | MS.gene75444:CDS |
| CCACCTGCATGGTTCTCGTA+TGG | 0.567655 | 3.3:-73146949 | MS.gene75444:CDS |
| TGTTTCCTAGTTGCCATGTG+AGG | 0.571163 | 3.3:+73149042 | None:intergenic |
| GAGAGAGGAACTTCAGCAAG+TGG | 0.573540 | 3.3:+73149727 | None:intergenic |
| TGGCCATACGAGAACCATGC+AGG | 0.580164 | 3.3:+73146946 | None:intergenic |
| CCAGGCTGTAGTTCCTCACA+TGG | 0.580243 | 3.3:-73149055 | MS.gene75444:CDS |
| GAGAAAATAGAGCTCTCTCT+CGG | 0.580696 | 3.3:+73147040 | None:intergenic |
| CGCAGCTAACAGCTGCAAAG+TGG | 0.582001 | 3.3:-73149926 | MS.gene75444:CDS |
| TTAACGTTGGAAGTGTTGCT+GGG | 0.587244 | 3.3:-73149008 | MS.gene75444:CDS |
| CACATGGCAACTAGGAAACA+GGG | 0.588117 | 3.3:-73149039 | MS.gene75444:CDS |
| GATGTTGTGAATGTTCTCCC+TGG | 0.591417 | 3.3:-73147153 | MS.gene75444:CDS |
| ATGTGCAGGAACCATGAGAA+TGG | 0.591626 | 3.3:-73149079 | MS.gene75444:intron |
| GCACTGTAAGCACCATTCCA+AGG | 0.593829 | 3.3:+73148973 | None:intergenic |
| CAGGGAAAGATTGTTAACGT+TGG | 0.595293 | 3.3:-73149021 | MS.gene75444:CDS |
| TTTAGCAAACTCGTCTGTAG+GGG | 0.599552 | 3.3:+73147002 | None:intergenic |
| TATTTGACTTCACAGCTCCA+GGG | 0.603014 | 3.3:+73147136 | None:intergenic |
| GATGTTCTTGTAAATAACGC+TGG | 0.609735 | 3.3:-73149766 | MS.gene75444:CDS |
| TACAGCCTGGACCATTCTCA+TGG | 0.615109 | 3.3:+73149068 | None:intergenic |
| AGCCATCTACAACCGCATGC+CGG | 0.618672 | 3.3:-73147097 | MS.gene75444:CDS |
| GGTTTGAATAGTTTCCACTC+CGG | 0.618933 | 3.3:+73147078 | None:intergenic |
| ATAGTTTCCACTCCGGCATG+CGG | 0.621048 | 3.3:+73147085 | None:intergenic |
| TTAGGAAGAAACCACCTGCA+TGG | 0.623601 | 3.3:-73146960 | MS.gene75444:CDS |
| TCAAGAAGATTCAAAACCAG+TGG | 0.624130 | 3.3:-73150004 | MS.gene75444:CDS |
| GTCTTGATCCAAATCCGCCA+TGG | 0.629951 | 3.3:+73149879 | None:intergenic |
| GTTCTCATCACAGGTTGCAG+CGG | 0.636969 | 3.3:-73149982 | MS.gene75444:CDS |
| AGAGAGGAACTTCAGCAAGT+GGG | 0.639603 | 3.3:+73149728 | None:intergenic |
| TCTACAACCGCATGCCGGAG+TGG | 0.644601 | 3.3:-73147092 | MS.gene75444:CDS |
| CAGCAGGTCACGTTCAACCA+TGG | 0.654260 | 3.3:-73149896 | MS.gene75444:CDS |
| AGAAAGTCTCTAACACAGAG+AGG | 0.683130 | 3.3:+73146889 | None:intergenic |
| CAGGTCACGTTCAACCATGG+CGG | 0.709328 | 3.3:-73149893 | MS.gene75444:CDS |
| CCATACGAGAACCATGCAGG+TGG | 0.716141 | 3.3:+73146949 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAATAGAATTTAGA+AGG | - | chr3.3:73147250-73147269 | MS.gene75444:intron | 10.0% |
| !!! | TTATTTTCTCAAAATTTAAT+CGG | - | chr3.3:73147521-73147540 | MS.gene75444:intron | 10.0% |
| !! | AAGTTAATTGAGTTTATTAA+CGG | - | chr3.3:73149034-73149053 | MS.gene75444:CDS | 15.0% |
| !! | ACTATATTCATATTCATATT+AGG | - | chr3.3:73149537-73149556 | MS.gene75444:intron | 15.0% |
| !! | TATTTATCAATGTTGTTAAT+AGG | - | chr3.3:73147749-73147768 | MS.gene75444:intron | 15.0% |
| !!! | AATAATGTTCTAGATAAATT+TGG | - | chr3.3:73147095-73147114 | MS.gene75444:CDS | 15.0% |
| !!! | TTTCAAACTTGTTTTAATTT+TGG | - | chr3.3:73147989-73148008 | MS.gene75444:intron | 15.0% |
| !! | AAGAACCAAAAAATACATTT+CGG | + | chr3.3:73148339-73148358 | None:intergenic | 20.0% |
| !! | ATAAAGGAAAAAAGTCAATT+TGG | + | chr3.3:73149660-73149679 | None:intergenic | 20.0% |
| !! | ATGAAGAAGATAAAAGAAAA+GGG | - | chr3.3:73148651-73148670 | MS.gene75444:intron | 20.0% |
| !! | GCAACTACAAAATTAAATAA+TGG | + | chr3.3:73149634-73149653 | None:intergenic | 20.0% |
| !! | TATGAAGAAGATAAAAGAAA+AGG | - | chr3.3:73148650-73148669 | MS.gene75444:intron | 20.0% |
| !! | TCATGCAATTACATTAAAAA+AGG | + | chr3.3:73148387-73148406 | None:intergenic | 20.0% |
| !!! | ATTGAAGTTTCTTTTGTTTT+GGG | + | chr3.3:73147645-73147664 | None:intergenic | 20.0% |
| !!! | TTAATTCTAGTTTTGTTTGT+TGG | - | chr3.3:73147314-73147333 | MS.gene75444:intron | 20.0% |
| !!! | TTTTCTTTTATCTTCTTCAT+AGG | + | chr3.3:73148651-73148670 | None:intergenic | 20.0% |
| !!! | TTTTTTTATGCAGTATACTT+TGG | + | chr3.3:73148813-73148832 | None:intergenic | 20.0% |
| ! | AAGTCAAATATTGGAAATTC+CGG | - | chr3.3:73149768-73149787 | MS.gene75444:CDS | 25.0% |
| ! | AATTGAGTTTATTAACGGTT+CGG | - | chr3.3:73149039-73149058 | MS.gene75444:CDS | 25.0% |
| ! | AGATTTCTATAACTTCCATA+TGG | + | chr3.3:73148044-73148063 | None:intergenic | 25.0% |
| ! | AGTTCTTGAAGAAAGAATTT+AGG | + | chr3.3:73147038-73147057 | None:intergenic | 25.0% |
| ! | ATAGATTTCTACCTATTGAT+TGG | - | chr3.3:73148570-73148589 | MS.gene75444:intron | 25.0% |
| ! | ATCAAATTAACACATTGATC+CGG | + | chr3.3:73149266-73149285 | None:intergenic | 25.0% |
| ! | GTTAACCGTTATCAAAATAA+TGG | - | chr3.3:73149070-73149089 | MS.gene75444:CDS | 25.0% |
| ! | GTTCTTGAAGAAAGAATTTA+GGG | + | chr3.3:73147037-73147056 | None:intergenic | 25.0% |
| ! | TATTAGGTATTACAGTACTA+AGG | - | chr3.3:73149553-73149572 | MS.gene75444:intron | 25.0% |
| ! | TGAAATGAAATAGTTCATGA+TGG | - | chr3.3:73149370-73149389 | MS.gene75444:intron | 25.0% |
| ! | TGGAGTTCTTAATCTATATT+GGG | - | chr3.3:73148468-73148487 | MS.gene75444:intron | 25.0% |
| ! | TGTATTCAGTTCATTTATGT+TGG | - | chr3.3:73147614-73147633 | MS.gene75444:intron | 25.0% |
| ! | TTGGAGTTCTTAATCTATAT+TGG | - | chr3.3:73148467-73148486 | MS.gene75444:intron | 25.0% |
| ! | TTTGAATCAAATGAACCATA+TGG | - | chr3.3:73148026-73148045 | MS.gene75444:intron | 25.0% |
| !! | TACCTGTTTTCATGTTTAAT+TGG | - | chr3.3:73148525-73148544 | MS.gene75444:intron | 25.0% |
| !! | TCGGTTCAAAATATTGTTTT+TGG | + | chr3.3:73148320-73148339 | None:intergenic | 25.0% |
| !! | TTGGCTAAAAAAGAAGTATA+TGG | - | chr3.3:73148589-73148608 | MS.gene75444:intron | 25.0% |
| !!! | CATTGAAGTTTCTTTTGTTT+TGG | + | chr3.3:73147646-73147665 | None:intergenic | 25.0% |
| !!! | GTTATTTTCAACAAACAGAT+TGG | - | chr3.3:73149695-73149714 | MS.gene75444:CDS | 25.0% |
| !!! | TTCTTTTGAAGAATGAGAAT+GGG | - | chr3.3:73147384-73147403 | MS.gene75444:intron | 25.0% |
| !!! | TTCTTTTTTAGCCAATCAAT+AGG | + | chr3.3:73148584-73148603 | None:intergenic | 25.0% |
| !!! | TTGAACCGAAATGTATTTTT+TGG | - | chr3.3:73148331-73148350 | MS.gene75444:intron | 25.0% |
| AACTTAAACCAGTGATTTCT+AGG | + | chr3.3:73149173-73149192 | None:intergenic | 30.0% | |
| ACCGAATTGTTGAAATAGTT+TGG | - | chr3.3:73148203-73148222 | MS.gene75444:intron | 30.0% | |
| ACGTTTGATACTAACGTATT+TGG | - | chr3.3:73147200-73147219 | MS.gene75444:intron | 30.0% | |
| ACTATTTCAACAATTCGGTT+CGG | + | chr3.3:73148202-73148221 | None:intergenic | 30.0% | |
| ACTTAAACCAGTGATTTCTA+GGG | + | chr3.3:73149172-73149191 | None:intergenic | 30.0% | |
| ATCTATATTGGGCACAATAT+AGG | - | chr3.3:73148479-73148498 | MS.gene75444:intron | 30.0% | |
| ATGCTTTGACAGATACATTA+AGG | - | chr3.3:73147958-73147977 | MS.gene75444:intron | 30.0% | |
| CAACAACATGTAAGACATAA+AGG | + | chr3.3:73149676-73149695 | None:intergenic | 30.0% | |
| CCCAAACTATTTCAACAATT+CGG | + | chr3.3:73148207-73148226 | None:intergenic | 30.0% | |
| CCGAATTGTTGAAATAGTTT+GGG | - | chr3.3:73148204-73148223 | MS.gene75444:intron | 30.0% | |
| GTCCAATTAAACATGAAAAC+AGG | + | chr3.3:73148530-73148549 | None:intergenic | 30.0% | |
| GTTGTTTACAAATGTTGTGA+TGG | - | chr3.3:73148432-73148451 | MS.gene75444:intron | 30.0% | |
| TACTAGTACCAAGTACAATT+GGG | - | chr3.3:73147708-73147727 | MS.gene75444:intron | 30.0% | |
| TCAGTTCATTTATGTTGGTA+TGG | - | chr3.3:73147619-73147638 | MS.gene75444:intron | 30.0% | |
| TCAGTTCGTAGGTAATAAAA+TGG | + | chr3.3:73148296-73148315 | None:intergenic | 30.0% | |
| TTACTAGTACCAAGTACAAT+TGG | - | chr3.3:73147707-73147726 | MS.gene75444:intron | 30.0% | |
| TTGATACTAACGTATTTGGT+TGG | - | chr3.3:73147204-73147223 | MS.gene75444:intron | 30.0% | |
| ! | AAATGTTGTGATGGAATTTG+AGG | - | chr3.3:73148441-73148460 | MS.gene75444:intron | 30.0% |
| ! | AGATTGGAACTTGGAAATTT+TGG | - | chr3.3:73149711-73149730 | MS.gene75444:CDS | 30.0% |
| ! | TTGATGAAAGTGTAATCTAG+CGG | - | chr3.3:73149281-73149300 | MS.gene75444:intron | 30.0% |
| !! | ACTTTTTCTCTTTCAGACTT+GGG | - | chr3.3:73148736-73148755 | MS.gene75444:intron | 30.0% |
| !! | CCGTTATCAAAATAATGGAT+CGG | - | chr3.3:73149075-73149094 | MS.gene75444:intron | 30.0% |
| !! | GTTCTTTTGAAGAATGAGAA+TGG | - | chr3.3:73147383-73147402 | MS.gene75444:intron | 30.0% |
| !! | TAGAGATTTTTGCTTTGTTG+TGG | - | chr3.3:73148075-73148094 | MS.gene75444:intron | 30.0% |
| !! | TAGTCATAAAGTACTGTGTA+GGG | + | chr3.3:73149318-73149337 | None:intergenic | 30.0% |
| !! | TGTTTAGAAGTATCAGATTG+AGG | - | chr3.3:73149504-73149523 | MS.gene75444:intron | 30.0% |
| !! | TTAGTCATAAAGTACTGTGT+AGG | + | chr3.3:73149319-73149338 | None:intergenic | 30.0% |
| !!! | CCGATCCATTATTTTGATAA+CGG | + | chr3.3:73149078-73149097 | None:intergenic | 30.0% |
| !!! | TACTTTTTCTCTTTCAGACT+TGG | - | chr3.3:73148735-73148754 | MS.gene75444:intron | 30.0% |
| !!! | TGAAATGGTTCGGTTAATTT+TGG | - | chr3.3:73149110-73149129 | MS.gene75444:intron | 30.0% |
| !!! | TGTTTTTTGCAATGTTCACT+TGG | + | chr3.3:73149345-73149364 | None:intergenic | 30.0% |
| ACCAAACTGAACCAAACTTA+TGG | - | chr3.3:73148261-73148280 | MS.gene75444:intron | 35.0% | |
| ACTGAACCAAACTTATGGTT+CGG | - | chr3.3:73148266-73148285 | MS.gene75444:intron | 35.0% | |
| AGTACATGTTTAGTCCAGTT+CGG | + | chr3.3:73148879-73148898 | None:intergenic | 35.0% | |
| ATGGGTTTGATGCTCAAAAA+GGG | - | chr3.3:73147402-73147421 | MS.gene75444:intron | 35.0% | |
| ATGTCAACAGAAATCACTAG+GGG | - | chr3.3:73148145-73148164 | MS.gene75444:intron | 35.0% | |
| CAAGAATTGGTGAAATGGTT+CGG | - | chr3.3:73149100-73149119 | MS.gene75444:intron | 35.0% | |
| CATGTCAACAGAAATCACTA+GGG | - | chr3.3:73148144-73148163 | MS.gene75444:intron | 35.0% | |
| GAACCATTAACCATGTTTCT+AGG | + | chr3.3:73149005-73149024 | None:intergenic | 35.0% | |
| GAAGTTGAAAAGTAGTTGTC+TGG | - | chr3.3:73147340-73147359 | MS.gene75444:intron | 35.0% | |
| GATGCAACAATACACCATTT+GGG | - | chr3.3:73149589-73149608 | MS.gene75444:intron | 35.0% | |
| GATGTTCTTGTAAATAACGC+TGG | - | chr3.3:73147125-73147144 | MS.gene75444:CDS | 35.0% | |
| GTACAATTGGGTGTAAACAA+AGG | - | chr3.3:73147720-73147739 | MS.gene75444:intron | 35.0% | |
| GTTTAGTCCTTGAAAGTGAA+AGG | + | chr3.3:73149474-73149493 | None:intergenic | 35.0% | |
| TATCAAACTGCCTAGAAACA+TGG | - | chr3.3:73148992-73149011 | MS.gene75444:CDS | 35.0% | |
| TCAACAAACAGATTGGAACT+TGG | - | chr3.3:73149702-73149721 | MS.gene75444:CDS | 35.0% | |
| TCAAGAAGATTCAAAACCAG+TGG | - | chr3.3:73146887-73146906 | MS.gene75444:CDS | 35.0% | |
| TGAAGGAAACCTTGGTTTAA+CGG | - | chr3.3:73148104-73148123 | MS.gene75444:intron | 35.0% | |
| TGTTTACACCCAATTGTACT+TGG | + | chr3.3:73147719-73147738 | None:intergenic | 35.0% | |
| TTAATTGGACTGTGCTTAGT+CGG | - | chr3.3:73148540-73148559 | MS.gene75444:intron | 35.0% | |
| TTAGATGCCTTTCACTTTCA+AGG | - | chr3.3:73149464-73149483 | MS.gene75444:intron | 35.0% | |
| ! | AAGTTTGGTTCAGTTTGGTT+CGG | + | chr3.3:73148260-73148279 | None:intergenic | 35.0% |
| ! | AATGGGTTTGATGCTCAAAA+AGG | - | chr3.3:73147401-73147420 | MS.gene75444:intron | 35.0% |
| ! | ACAATACACCATTTGGGATT+TGG | - | chr3.3:73149595-73149614 | MS.gene75444:intron | 35.0% |
| ! | ACCATAAGTTTGGTTCAGTT+TGG | + | chr3.3:73148265-73148284 | None:intergenic | 35.0% |
| ! | CGTTAGTATCAAACGTGTTT+TGG | + | chr3.3:73147196-73147215 | None:intergenic | 35.0% |
| ! | CTTAAACCAGTGATTTCTAG+GGG | + | chr3.3:73149171-73149190 | None:intergenic | 35.0% |
| ! | TAATGGATCGGTTCAAGAAT+TGG | - | chr3.3:73149087-73149106 | MS.gene75444:intron | 35.0% |
| ! | TCGAAGATTTTTGCAACACT+TGG | - | chr3.3:73148410-73148429 | MS.gene75444:intron | 35.0% |
| !! | AATTTTGGTCCAATTCGGTT+TGG | - | chr3.3:73149125-73149144 | MS.gene75444:intron | 35.0% |
| !! | AGTTTATTAACGGTTCGGTT+CGG | - | chr3.3:73149044-73149063 | MS.gene75444:CDS | 35.0% |
| !! | CGGTTAATTTTGGTCCAATT+CGG | - | chr3.3:73149120-73149139 | MS.gene75444:intron | 35.0% |
| !! | CTTTTAGAGATAGTCTGATC+CGG | - | chr3.3:73149244-73149263 | MS.gene75444:intron | 35.0% |
| !!! | AAAGTAGTTGTCTGGCTTTT+TGG | - | chr3.3:73147348-73147367 | MS.gene75444:intron | 35.0% |
| !!! | TTGTTTTTGGTTCAGTTCGT+AGG | + | chr3.3:73148307-73148326 | None:intergenic | 35.0% |
| AACCAAGAACCAAACCGAAT+TGG | + | chr3.3:73149137-73149156 | None:intergenic | 40.0% | |
| AACTCTGTTCACGCTTTCAT+CGG | + | chr3.3:73147072-73147091 | None:intergenic | 40.0% | |
| AAGTGTAATCTAGCGGAGTT+TGG | - | chr3.3:73149288-73149307 | MS.gene75444:intron | 40.0% | |
| ACTGTAACACCGTTAAACCA+AGG | + | chr3.3:73148116-73148135 | None:intergenic | 40.0% | |
| AGAAAGTCTCTAACACAGAG+AGG | + | chr3.3:73150005-73150024 | None:intergenic | 40.0% | |
| ATATCACTCCATACATGTGC+AGG | - | chr3.3:73147798-73147817 | MS.gene75444:intron | 40.0% | |
| CAGCCATGACAGTAGAATAA+TGG | + | chr3.3:73149968-73149987 | None:intergenic | 40.0% | |
| CAGGGAAAGATTGTTAACGT+TGG | - | chr3.3:73147870-73147889 | MS.gene75444:intron | 40.0% | |
| CCATGTCAACAGAAATCACT+AGG | - | chr3.3:73148143-73148162 | MS.gene75444:intron | 40.0% | |
| CCTAGTGATTTCTGTTGACA+TGG | + | chr3.3:73148146-73148165 | None:intergenic | 40.0% | |
| CGGTTCAAGAATTGGTGAAA+TGG | - | chr3.3:73149095-73149114 | MS.gene75444:intron | 40.0% | |
| CTCTAACACAGAGAGGTAAA+TGG | + | chr3.3:73149998-73150017 | None:intergenic | 40.0% | |
| CTGCCTAGAAACATGGTTAA+TGG | - | chr3.3:73148999-73149018 | MS.gene75444:CDS | 40.0% | |
| GAGAAAATAGAGCTCTCTCT+CGG | + | chr3.3:73149854-73149873 | None:intergenic | 40.0% | |
| GGAGCTGTGAAGTCAAATAT+TGG | - | chr3.3:73149759-73149778 | MS.gene75444:CDS | 40.0% | |
| GGATGCAACAATACACCATT+TGG | - | chr3.3:73149588-73149607 | MS.gene75444:intron | 40.0% | |
| GGTTAACCGAACCATAAGTT+TGG | + | chr3.3:73148275-73148294 | None:intergenic | 40.0% | |
| GGTTCGTTCCAAACCTTAAA+CGG | + | chr3.3:73148239-73148258 | None:intergenic | 40.0% | |
| GGTTTGAATAGTTTCCACTC+CGG | + | chr3.3:73149816-73149835 | None:intergenic | 40.0% | |
| GTTCCAAACCTTAAACGGTT+CGG | + | chr3.3:73148234-73148253 | None:intergenic | 40.0% | |
| GTTTAGCAAACTCGTCTGTA+GGG | + | chr3.3:73149893-73149912 | None:intergenic | 40.0% | |
| TGGCCATTATTCTACTGTCA+TGG | - | chr3.3:73149962-73149981 | MS.gene75444:CDS | 40.0% | |
| TTGTTATGCTTACACCGAAC+TGG | - | chr3.3:73148862-73148881 | MS.gene75444:intron | 40.0% | |
| TTGTTGCATCCACCAAAACT+TGG | + | chr3.3:73149579-73149598 | None:intergenic | 40.0% | |
| TTTAGCAAACTCGTCTGTAG+GGG | + | chr3.3:73149892-73149911 | None:intergenic | 40.0% | |
| ! | AAACCGAACCGTTTAAGGTT+TGG | - | chr3.3:73148228-73148247 | MS.gene75444:intron | 40.0% |
| ! | ACACGCGTTCTGTTCATTTT+AGG | + | chr3.3:73148972-73148991 | None:intergenic | 40.0% |
| ! | ACAGTACTAAGGCCAAGTTT+TGG | - | chr3.3:73149564-73149583 | MS.gene75444:intron | 40.0% |
| ! | AGAGAGAGCTCTATTTTCTC+AGG | - | chr3.3:73149854-73149873 | MS.gene75444:CDS | 40.0% |
| ! | AGAGAGCTCTATTTTCTCAG+GGG | - | chr3.3:73149856-73149875 | MS.gene75444:CDS | 40.0% |
| ! | ATACACCATTTGGGATTTGG+TGG | - | chr3.3:73149598-73149617 | MS.gene75444:intron | 40.0% |
| ! | ATATTTGACTTCACAGCTCC+AGG | + | chr3.3:73149759-73149778 | None:intergenic | 40.0% |
| ! | GAGAGAGCTCTATTTTCTCA+GGG | - | chr3.3:73149855-73149874 | MS.gene75444:CDS | 40.0% |
| ! | TATTTGACTTCACAGCTCCA+GGG | + | chr3.3:73149758-73149777 | None:intergenic | 40.0% |
| !! | TTAACGTTGGAAGTGTTGCT+GGG | - | chr3.3:73147883-73147902 | MS.gene75444:intron | 40.0% |
| AAACCAGTGGTTCTCATCAC+AGG | - | chr3.3:73146900-73146919 | MS.gene75444:CDS | 45.0% | |
| AACGCTGGTGTTCTTTGTGT+GGG | - | chr3.3:73147140-73147159 | MS.gene75444:CDS | 45.0% | |
| AAGCACAAACACTCGGATAC+TGG | + | chr3.3:73147552-73147571 | None:intergenic | 45.0% | |
| AGAGAGGAACTTCAGCAAGT+GGG | + | chr3.3:73147166-73147185 | None:intergenic | 45.0% | |
| ATGCAGGTGGTTTCTTCCTA+AGG | + | chr3.3:73149932-73149951 | None:intergenic | 45.0% | |
| ATGTGCAGGAACCATGAGAA+TGG | - | chr3.3:73147812-73147831 | MS.gene75444:intron | 45.0% | |
| CAACAGAAATCACTAGGGGT+GGG | - | chr3.3:73148149-73148168 | MS.gene75444:intron | 45.0% | |
| CACATGGCAACTAGGAAACA+GGG | - | chr3.3:73147852-73147871 | MS.gene75444:intron | 45.0% | |
| CCCTATGAAGCACAAACACT+CGG | + | chr3.3:73147559-73147578 | None:intergenic | 45.0% | |
| CCGAGTGTTTGTGCTTCATA+GGG | - | chr3.3:73147556-73147575 | MS.gene75444:intron | 45.0% | |
| CGTTTAGCAAACTCGTCTGT+AGG | + | chr3.3:73149894-73149913 | None:intergenic | 45.0% | |
| GATGTTGTGAATGTTCTCCC+TGG | - | chr3.3:73149738-73149757 | MS.gene75444:CDS | 45.0% | |
| GCGCAGACAATTCTGTTTGA+AGG | - | chr3.3:73147441-73147460 | MS.gene75444:intron | 45.0% | |
| GTATCAGATTGAGGCTCTAC+TGG | - | chr3.3:73149513-73149532 | MS.gene75444:intron | 45.0% | |
| GTCGAACACTGACACATGTT+GGG | + | chr3.3:73147479-73147498 | None:intergenic | 45.0% | |
| TAACGCTGGTGTTCTTTGTG+TGG | - | chr3.3:73147139-73147158 | MS.gene75444:CDS | 45.0% | |
| TAGTTCCTCACATGGCAACT+AGG | - | chr3.3:73147844-73147863 | MS.gene75444:intron | 45.0% | |
| TCAACAGAAATCACTAGGGG+TGG | - | chr3.3:73148148-73148167 | MS.gene75444:intron | 45.0% | |
| TCACATGGCAACTAGGAAAC+AGG | - | chr3.3:73147851-73147870 | MS.gene75444:intron | 45.0% | |
| TCATGGTTCCTGCACATGTA+TGG | + | chr3.3:73147809-73147828 | None:intergenic | 45.0% | |
| TCCGAGTGTTTGTGCTTCAT+AGG | - | chr3.3:73147555-73147574 | MS.gene75444:intron | 45.0% | |
| TGGGAAAACCGAACCGTTTA+AGG | - | chr3.3:73148223-73148242 | MS.gene75444:intron | 45.0% | |
| TGTCGAACACTGACACATGT+TGG | + | chr3.3:73147480-73147499 | None:intergenic | 45.0% | |
| TGTTTCCTAGTTGCCATGTG+AGG | + | chr3.3:73147852-73147871 | None:intergenic | 45.0% | |
| TTAGGAAGAAACCACCTGCA+TGG | - | chr3.3:73149931-73149950 | MS.gene75444:CDS | 45.0% | |
| ! | AAACCAGTGATTTCTAGGGG+TGG | + | chr3.3:73149168-73149187 | None:intergenic | 45.0% |
| ! | AACCAGTGATTTCTAGGGGT+GGG | + | chr3.3:73149167-73149186 | None:intergenic | 45.0% |
| ! | CTTTGTTGTGGTGTACGTGA+AGG | - | chr3.3:73148087-73148106 | MS.gene75444:intron | 45.0% |
| ! | GTGATGGAATTTGAGGCACT+TGG | - | chr3.3:73148448-73148467 | MS.gene75444:intron | 45.0% |
| ! | TCTCGGATTGCTGCTTCAAA+TGG | + | chr3.3:73149837-73149856 | None:intergenic | 45.0% |
| !! | GTACTAAGGCCAAGTTTTGG+TGG | - | chr3.3:73149567-73149586 | MS.gene75444:intron | 45.0% |
| !! | GTCCAATTCGGTTTGGTTCT+TGG | - | chr3.3:73149132-73149151 | MS.gene75444:intron | 45.0% |
| !! | GTGTTTTGGATTGCAGAGAG+AGG | + | chr3.3:73147182-73147201 | None:intergenic | 45.0% |
| !! | GTTAACGTTGGAAGTGTTGC+TGG | - | chr3.3:73147882-73147901 | MS.gene75444:intron | 45.0% |
| AGGAACCATGAGAATGGTCC+AGG | - | chr3.3:73147818-73147837 | MS.gene75444:intron | 50.0% | |
| ATAGTTTCCACTCCGGCATG+CGG | + | chr3.3:73149809-73149828 | None:intergenic | 50.0% | |
| CAACCTGTGATGAGAACCAC+TGG | + | chr3.3:73146906-73146925 | None:intergenic | 50.0% | |
| CTTCCTAAGGACAGCAGCTA+CGG | + | chr3.3:73149919-73149938 | None:intergenic | 50.0% | |
| GAGAGAGGAACTTCAGCAAG+TGG | + | chr3.3:73147167-73147186 | None:intergenic | 50.0% | |
| GCACTGTAAGCACCATTCCA+AGG | + | chr3.3:73147921-73147940 | None:intergenic | 50.0% | |
| GGTGTACGTGAAGGAAACCT+TGG | - | chr3.3:73148096-73148115 | MS.gene75444:intron | 50.0% | |
| GTCTTGATCCAAATCCGCCA+TGG | + | chr3.3:73147015-73147034 | None:intergenic | 50.0% | |
| GTTCTCATCACAGGTTGCAG+CGG | - | chr3.3:73146909-73146928 | MS.gene75444:CDS | 50.0% | |
| TACAGCCTGGACCATTCTCA+TGG | + | chr3.3:73147826-73147845 | None:intergenic | 50.0% | |
| TCCAGCCACCAAATCCCAAA+TGG | + | chr3.3:73149606-73149625 | None:intergenic | 50.0% | |
| TTGGCATCTGGACCTTGGAA+TGG | - | chr3.3:73147906-73147925 | MS.gene75444:intron | 50.0% | |
| TTTGCAGCTGTTAGCTGCGA+AGG | + | chr3.3:73146964-73146983 | None:intergenic | 50.0% | |
| ! | TTCTGTTTGAAGGCGTGTCC+CGG | - | chr3.3:73147451-73147470 | MS.gene75444:intron | 50.0% |
| !! | ACCATTTGGGATTTGGTGGC+TGG | - | chr3.3:73149602-73149621 | MS.gene75444:intron | 50.0% |
| !! | ACGTTCAACCATGGCGGATT+TGG | - | chr3.3:73147004-73147023 | MS.gene75444:CDS | 50.0% |
| ACTGACACATGTTGGGCACC+GGG | + | chr3.3:73147472-73147491 | None:intergenic | 55.0% | |
| AGCCATCTACAACCGCATGC+CGG | - | chr3.3:73149794-73149813 | MS.gene75444:CDS | 55.0% | |
| CACTGACACATGTTGGGCAC+CGG | + | chr3.3:73147473-73147492 | None:intergenic | 55.0% | |
| CAGCAGGTCACGTTCAACCA+TGG | - | chr3.3:73146995-73147014 | MS.gene75444:CDS | 55.0% | |
| CAGGTCACGTTCAACCATGG+CGG | - | chr3.3:73146998-73147017 | MS.gene75444:CDS | 55.0% | |
| CATGGTTGAACGTGACCTGC+TGG | + | chr3.3:73146997-73147016 | None:intergenic | 55.0% | |
| CCACCTGCATGGTTCTCGTA+TGG | - | chr3.3:73149942-73149961 | MS.gene75444:CDS | 55.0% | |
| CCAGGCTGTAGTTCCTCACA+TGG | - | chr3.3:73147836-73147855 | MS.gene75444:intron | 55.0% | |
| CCATACGAGAACCATGCAGG+TGG | + | chr3.3:73149945-73149964 | None:intergenic | 55.0% | |
| CCATGTGAGGAACTACAGCC+TGG | + | chr3.3:73147839-73147858 | None:intergenic | 55.0% | |
| CGCAGCTAACAGCTGCAAAG+TGG | - | chr3.3:73146965-73146984 | MS.gene75444:CDS | 55.0% | |
| GCAAAGTGGTTGCAACCAGC+AGG | - | chr3.3:73146979-73146998 | MS.gene75444:CDS | 55.0% | |
| GCGGTTGTAGATGGCTATGC+CGG | + | chr3.3:73149790-73149809 | None:intergenic | 55.0% | |
| TCACTAGGGGTGGGCATGTT+TGG | - | chr3.3:73148158-73148177 | MS.gene75444:intron | 55.0% | |
| TGCCCACCCCTAGAAATCAC+TGG | - | chr3.3:73149162-73149181 | MS.gene75444:intron | 55.0% | |
| TGGCCATACGAGAACCATGC+AGG | + | chr3.3:73149948-73149967 | None:intergenic | 55.0% | |
| !! | AGTGTTGCTGGGTTGGCATC+TGG | - | chr3.3:73147894-73147913 | MS.gene75444:intron | 55.0% |
| !! | CGTTGGAAGTGTTGCTGGGT+TGG | - | chr3.3:73147887-73147906 | MS.gene75444:intron | 55.0% |
| ATCACAGGTTGCAGCGGAGG+AGG | - | chr3.3:73146915-73146934 | MS.gene75444:CDS | 60.0% | |
| CTCATCACAGGTTGCAGCGG+AGG | - | chr3.3:73146912-73146931 | MS.gene75444:CDS | 60.0% | |
| CTCCGGCATGCGGTTGTAGA+TGG | + | chr3.3:73149799-73149818 | None:intergenic | 60.0% | |
| GCACCGTAGCTGCTGTCCTT+AGG | - | chr3.3:73149913-73149932 | MS.gene75444:CDS | 60.0% | |
| TCTACAACCGCATGCCGGAG+TGG | - | chr3.3:73149799-73149818 | MS.gene75444:CDS | 60.0% | |
| ! | GGTTGCAGCGGAGGAGGTAT+AGG | - | chr3.3:73146921-73146940 | MS.gene75444:CDS | 60.0% |
| !! | CTGGGTTGGCATCTGGACCT+TGG | - | chr3.3:73147901-73147920 | MS.gene75444:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 73146864 | 73150049 | 73146864 | ID=MS.gene75444 |
| chr3.3 | mRNA | 73146864 | 73150049 | 73146864 | ID=MS.gene75444.t1;Parent=MS.gene75444 |
| chr3.3 | exon | 73149692 | 73150049 | 73149692 | ID=MS.gene75444.t1.exon1;Parent=MS.gene75444.t1 |
| chr3.3 | CDS | 73149692 | 73150049 | 73149692 | ID=cds.MS.gene75444.t1;Parent=MS.gene75444.t1 |
| chr3.3 | exon | 73148934 | 73149093 | 73148934 | ID=MS.gene75444.t1.exon2;Parent=MS.gene75444.t1 |
| chr3.3 | CDS | 73148934 | 73149093 | 73148934 | ID=cds.MS.gene75444.t1;Parent=MS.gene75444.t1 |
| chr3.3 | exon | 73146864 | 73147200 | 73146864 | ID=MS.gene75444.t1.exon3;Parent=MS.gene75444.t1 |
| chr3.3 | CDS | 73146864 | 73147200 | 73146864 | ID=cds.MS.gene75444.t1;Parent=MS.gene75444.t1 |
| Gene Sequence |
| Protein sequence |
