Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75535.t1 | XP_003601878.1 | 87.6 | 526 | 23 | 3 | 1 | 486 | 1 | 524 | 2.70E-257 | 897.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75535.t1 | A2WY46 | 35.5 | 521 | 209 | 12 | 46 | 448 | 97 | 608 | 1.9e-70 | 268.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75535.t1 | G7J336 | 87.6 | 526 | 23 | 3 | 1 | 486 | 1 | 524 | 2.0e-257 | 897.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049251 | MS.gene75535 | 0.811777 | 5.91E-51 | -1.69E-46 |
MS.gene050710 | MS.gene75535 | 0.826537 | 2.57E-54 | -1.69E-46 |
MS.gene050874 | MS.gene75535 | 0.800142 | 1.66E-48 | -1.69E-46 |
MS.gene050875 | MS.gene75535 | 0.82899 | 6.61E-55 | -1.69E-46 |
MS.gene051439 | MS.gene75535 | 0.813274 | 2.78E-51 | -1.69E-46 |
MS.gene051914 | MS.gene75535 | 0.829065 | 6.34E-55 | -1.69E-46 |
MS.gene052308 | MS.gene75535 | 0.815599 | 8.51E-52 | -1.69E-46 |
MS.gene054633 | MS.gene75535 | 0.833152 | 6.28E-56 | -1.69E-46 |
MS.gene054662 | MS.gene75535 | 0.811459 | 6.93E-51 | -1.69E-46 |
MS.gene054742 | MS.gene75535 | 0.801375 | 9.28E-49 | -1.69E-46 |
MS.gene054941 | MS.gene75535 | 0.803004 | 4.29E-49 | -1.69E-46 |
MS.gene05640 | MS.gene75535 | 0.819102 | 1.39E-52 | -1.69E-46 |
MS.gene05652 | MS.gene75535 | 0.820764 | 5.77E-53 | -1.69E-46 |
MS.gene057669 | MS.gene75535 | 0.828364 | 9.37E-55 | -1.69E-46 |
MS.gene058128 | MS.gene75535 | 0.80241 | 5.69E-49 | -1.69E-46 |
MS.gene058853 | MS.gene75535 | 0.80991 | 1.50E-50 | -1.69E-46 |
MS.gene05926 | MS.gene75535 | 0.861001 | 1.39E-63 | -1.69E-46 |
MS.gene059616 | MS.gene75535 | 0.814958 | 1.18E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75535.t1 | MTR_3g086380 | 88.593 | 526 | 18 | 3 | 1 | 486 | 1 | 524 | 0.0 | 912 |
MS.gene75535.t1 | MTR_3g448370 | 47.159 | 176 | 77 | 5 | 248 | 419 | 645 | 808 | 5.76e-37 | 145 |
MS.gene75535.t1 | MTR_3g448370 | 47.159 | 176 | 77 | 5 | 248 | 419 | 540 | 703 | 6.21e-37 | 145 |
MS.gene75535.t1 | MTR_3g448370 | 47.159 | 176 | 77 | 5 | 248 | 419 | 656 | 819 | 6.55e-37 | 145 |
MS.gene75535.t1 | MTR_3g448370 | 47.159 | 176 | 77 | 5 | 248 | 419 | 642 | 805 | 7.17e-37 | 145 |
MS.gene75535.t1 | MTR_3g448370 | 47.514 | 181 | 78 | 6 | 244 | 419 | 640 | 808 | 1.01e-36 | 144 |
MS.gene75535.t1 | MTR_8g100160 | 46.575 | 146 | 66 | 1 | 293 | 438 | 795 | 928 | 1.08e-35 | 141 |
MS.gene75535.t1 | MTR_2g049640 | 40.278 | 216 | 104 | 7 | 248 | 453 | 648 | 848 | 1.18e-35 | 141 |
MS.gene75535.t1 | MTR_8g100160 | 46.575 | 146 | 66 | 1 | 293 | 438 | 799 | 932 | 1.34e-35 | 141 |
MS.gene75535.t1 | MTR_7g020950 | 43.243 | 185 | 80 | 5 | 254 | 435 | 555 | 717 | 2.75e-35 | 140 |
MS.gene75535.t1 | MTR_7g020950 | 43.243 | 185 | 80 | 5 | 254 | 435 | 639 | 801 | 3.10e-35 | 140 |
MS.gene75535.t1 | MTR_3g098620 | 46.575 | 146 | 66 | 1 | 293 | 438 | 791 | 924 | 4.86e-35 | 139 |
MS.gene75535.t1 | MTR_3g098620 | 47.857 | 140 | 59 | 2 | 293 | 432 | 791 | 916 | 3.24e-34 | 137 |
MS.gene75535.t1 | MTR_3g098620 | 47.857 | 140 | 59 | 2 | 293 | 432 | 791 | 916 | 5.04e-34 | 136 |
MS.gene75535.t1 | MTR_0166s0040 | 43.382 | 136 | 71 | 1 | 296 | 425 | 41 | 176 | 1.18e-30 | 118 |
MS.gene75535.t1 | MTR_5g059640 | 43.382 | 136 | 71 | 1 | 296 | 425 | 41 | 176 | 1.44e-30 | 117 |
MS.gene75535.t1 | MTR_4g071310 | 46.043 | 139 | 72 | 2 | 290 | 425 | 181 | 319 | 7.71e-30 | 119 |
MS.gene75535.t1 | MTR_5g059620 | 42.647 | 136 | 71 | 2 | 296 | 425 | 73 | 207 | 4.33e-29 | 114 |
MS.gene75535.t1 | MTR_0166s0030 | 42.647 | 136 | 71 | 2 | 296 | 425 | 73 | 207 | 2.78e-28 | 113 |
MS.gene75535.t1 | MTR_7g118210 | 40.252 | 159 | 64 | 3 | 281 | 438 | 556 | 684 | 8.04e-28 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75535.t1 | AT3G26120 | 41.767 | 498 | 203 | 14 | 42 | 465 | 101 | 585 | 9.71e-108 | 333 |
MS.gene75535.t1 | AT1G67770 | 38.202 | 445 | 186 | 13 | 42 | 435 | 75 | 481 | 5.11e-83 | 266 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 734 | 867 | 4.42e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 741 | 874 | 4.46e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 741 | 874 | 4.46e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 741 | 874 | 4.46e-38 | 149 |
MS.gene75535.t1 | AT5G61960 | 50.000 | 148 | 58 | 3 | 293 | 438 | 741 | 874 | 4.46e-38 | 149 |
MS.gene75535.t1 | AT5G07290 | 48.649 | 148 | 60 | 3 | 293 | 438 | 739 | 872 | 6.38e-37 | 145 |
MS.gene75535.t1 | AT1G37140 | 49.242 | 132 | 59 | 2 | 295 | 425 | 83 | 207 | 9.94e-35 | 130 |
MS.gene75535.t1 | AT1G29400 | 47.482 | 139 | 61 | 1 | 286 | 424 | 643 | 769 | 6.81e-34 | 136 |
MS.gene75535.t1 | AT1G29400 | 47.482 | 139 | 61 | 1 | 286 | 424 | 643 | 769 | 6.81e-34 | 136 |
MS.gene75535.t1 | AT1G29400 | 47.482 | 139 | 61 | 1 | 286 | 424 | 643 | 769 | 6.81e-34 | 136 |
MS.gene75535.t1 | AT5G07930 | 35.912 | 181 | 108 | 4 | 257 | 436 | 100 | 273 | 1.49e-28 | 114 |
MS.gene75535.t1 | AT5G07930 | 36.313 | 179 | 106 | 4 | 259 | 436 | 102 | 273 | 1.90e-28 | 114 |
MS.gene75535.t1 | AT5G07930 | 36.691 | 139 | 83 | 2 | 257 | 394 | 100 | 234 | 6.70e-24 | 101 |
MS.gene75535.t1 | AT2G42890 | 41.727 | 139 | 68 | 3 | 281 | 418 | 664 | 790 | 1.20e-23 | 105 |
MS.gene75535.t1 | AT2G42890 | 41.727 | 139 | 68 | 3 | 281 | 418 | 651 | 777 | 1.21e-23 | 105 |
MS.gene75535.t1 | AT2G42890 | 41.727 | 139 | 68 | 3 | 281 | 418 | 651 | 777 | 1.21e-23 | 105 |
MS.gene75535.t1 | AT1G37140 | 45.349 | 86 | 46 | 1 | 341 | 425 | 91 | 176 | 1.45e-17 | 81.6 |
Find 154 sgRNAs with CRISPR-Local
Find 215 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTGGAGCAGTAGGGTTTA+AGG | 0.136392 | 3.1:-69271980 | None:intergenic |
GGATTAGAATGAAATGATTT+TGG | 0.200138 | 3.1:-69272855 | None:intergenic |
GTAGCGGCGTGGGGAAAATT+TGG | 0.206226 | 3.1:-69272326 | None:intergenic |
AATGATTATAGGAGCAATTA+AGG | 0.224880 | 3.1:+69272695 | MS.gene75535:intron |
TTACTAAACTCAATAGTAAT+TGG | 0.237341 | 3.1:-69272831 | None:intergenic |
CGAAAAGATCTTTCAGCTTT+CGG | 0.261299 | 3.1:+69272156 | MS.gene75535:CDS |
GGATTAAGGTTGAAATTAAA+TGG | 0.265370 | 3.1:-69272900 | None:intergenic |
GTCAGTTTCAGGGGTGGGAG+GGG | 0.284736 | 3.1:-69272130 | None:intergenic |
AACAAATGCAACGTGGGATA+TGG | 0.304008 | 3.1:+69273752 | MS.gene75535:CDS |
GTTTCAGGGGTGGGAGGGGC+AGG | 0.322616 | 3.1:-69272126 | None:intergenic |
GGGAAAGCGCTTGGAGTTGG+AGG | 0.325471 | 3.1:+69273090 | MS.gene75535:CDS |
GTTCAAAGTAGAGAGAGTTT+TGG | 0.328298 | 3.1:+69273068 | MS.gene75535:CDS |
TTGAATGGCAAAGAGATTAA+TGG | 0.333735 | 3.1:+69272804 | MS.gene75535:CDS |
GCGGGGAAGGAGGTGGATTA+AGG | 0.334836 | 3.1:-69272914 | None:intergenic |
CCACAATAGGATTGGTTCAA+TGG | 0.341291 | 3.1:+69273007 | MS.gene75535:CDS |
CCGCTACCTCCGCCGCCGCC+AGG | 0.349970 | 3.1:+69272342 | MS.gene75535:CDS |
TTTATCATGAGAGTCGTTCT+AGG | 0.352179 | 3.1:-69273179 | None:intergenic |
GGTATGGGAATGTAGTTGTT+TGG | 0.353379 | 3.1:-69272009 | None:intergenic |
CGGCGGCGGCGTGACGGCAT+AGG | 0.357948 | 3.1:-69272064 | None:intergenic |
ATAAGAGTTTGACATTTAAC+CGG | 0.373048 | 3.1:+69272979 | MS.gene75535:CDS |
TGGAAGAAGGTCAAGATCAT+AGG | 0.376422 | 3.1:+69274207 | MS.gene75535:CDS |
ATTACTTACTTAAAATCTAT+AGG | 0.386154 | 3.1:-69273414 | None:intergenic |
TTAACCGGGTAAACCACAAT+AGG | 0.393493 | 3.1:+69272994 | MS.gene75535:CDS |
AGGTCAGTTTCAGGGGTGGG+AGG | 0.393832 | 3.1:-69272132 | None:intergenic |
GCGGCGGAGGTAGCGGCGTG+GGG | 0.403278 | 3.1:-69272335 | None:intergenic |
ATGTTCCCCGCCACTGGAAT+TGG | 0.407737 | 3.1:-69274146 | None:intergenic |
TAGCGGCGTGGGGAAAATTT+GGG | 0.411228 | 3.1:-69272325 | None:intergenic |
GTATGGGAATGTAGTTGTTT+GGG | 0.413782 | 3.1:-69272008 | None:intergenic |
GCGGGGAACATGCTACAAAT+TGG | 0.413975 | 3.1:+69274158 | MS.gene75535:CDS |
CGGAGGTCAGTTTCAGGGGT+GGG | 0.416060 | 3.1:-69272135 | None:intergenic |
CGGCGGCGGAGGTAGCGGCG+TGG | 0.416539 | 3.1:-69272337 | None:intergenic |
GAGAATAGAGCGGGTGGGTA+TGG | 0.419463 | 3.1:-69272097 | None:intergenic |
CCTGGCGGCGGCGGAGGTAG+CGG | 0.423978 | 3.1:-69272342 | None:intergenic |
GGGTTAAACTCTGGAGCAGT+AGG | 0.431326 | 3.1:-69271988 | None:intergenic |
GGCGGCGGAGGTAGCGGCGT+GGG | 0.432774 | 3.1:-69272336 | None:intergenic |
AAAGCGCTTGGAGTTGGAGG+GGG | 0.435867 | 3.1:+69273093 | MS.gene75535:CDS |
GGGTGGGAGGGGCAGGACTA+AGG | 0.436139 | 3.1:-69272119 | None:intergenic |
CGCCGTCGCGGGGAAGGAGG+TGG | 0.436349 | 3.1:-69272921 | None:intergenic |
ACGAGACCTGGCGGCGGCGG+AGG | 0.436363 | 3.1:-69272348 | None:intergenic |
CACAATAGGATTGGTTCAAT+GGG | 0.438115 | 3.1:+69273008 | MS.gene75535:CDS |
GGCATAGGGTGGGTAGGGGT+AGG | 0.442789 | 3.1:-69272049 | None:intergenic |
GGCCTTCCAGCACCAACATT+GGG | 0.443227 | 3.1:+69273820 | MS.gene75535:CDS |
AAAGACGGACCTGTATTTGT+TGG | 0.443856 | 3.1:-69273210 | None:intergenic |
CGACATAAGAGATGCTGAAA+AGG | 0.449622 | 3.1:+69272770 | MS.gene75535:CDS |
AAGACGGACCTGTATTTGTT+GGG | 0.452268 | 3.1:-69273209 | None:intergenic |
TGGTTCAATGGGTTCATTGA+AGG | 0.454062 | 3.1:+69273019 | MS.gene75535:CDS |
ACTCACATACGCAAGAGTTC+AGG | 0.454877 | 3.1:+69273871 | MS.gene75535:CDS |
ACAAAGTCATAGGAGGATAA+AGG | 0.456334 | 3.1:-69273384 | None:intergenic |
AAAACATACCCAACAAATAC+AGG | 0.458427 | 3.1:+69273201 | MS.gene75535:CDS |
TGTAGCATGTTCCCCGCCAC+TGG | 0.459934 | 3.1:-69274152 | None:intergenic |
GAAGTTACTGTTGAATATGC+TGG | 0.460681 | 3.1:+69273317 | MS.gene75535:CDS |
GTGGAGAAAATCGCCGTCGC+GGG | 0.461953 | 3.1:-69272932 | None:intergenic |
GTGACGGCATAGGGTGGGTA+GGG | 0.463074 | 3.1:-69272054 | None:intergenic |
ATACCGACGGCGACTGGTAT+GGG | 0.467858 | 3.1:-69272024 | None:intergenic |
GGTCAGTTTCAGGGGTGGGA+GGG | 0.468373 | 3.1:-69272131 | None:intergenic |
CTTATTAGAGATGTAAGCAT+TGG | 0.469382 | 3.1:-69272877 | None:intergenic |
GAAAGCGCTTGGAGTTGGAG+GGG | 0.473295 | 3.1:+69273092 | MS.gene75535:CDS |
GCGACGAGACCTGGCGGCGG+CGG | 0.473759 | 3.1:-69272351 | None:intergenic |
CGTGACGGCATAGGGTGGGT+AGG | 0.474152 | 3.1:-69272055 | None:intergenic |
TGACGGCATAGGGTGGGTAG+GGG | 0.476410 | 3.1:-69272053 | None:intergenic |
GGGATACACCATGGAAGAAA+AGG | 0.479864 | 3.1:+69272724 | MS.gene75535:CDS |
AATAGAGCGGGTGGGTATGG+TGG | 0.480624 | 3.1:-69272094 | None:intergenic |
TTATTAGAGATGTAAGCATT+GGG | 0.483182 | 3.1:-69272876 | None:intergenic |
TTGGGGAAAGCGCTTGGAGT+TGG | 0.484284 | 3.1:+69273087 | MS.gene75535:CDS |
AGGAAGGTACACAAAGTCAT+AGG | 0.485708 | 3.1:-69273394 | None:intergenic |
GGCGGCGGCGTGACGGCATA+GGG | 0.486024 | 3.1:-69272063 | None:intergenic |
CTACTTTGAACTCTAACAAA+AGG | 0.492457 | 3.1:-69273056 | None:intergenic |
GGCACACCGGCGACGAGACC+TGG | 0.493166 | 3.1:-69272360 | None:intergenic |
AATACCGACGGCGACTGGTA+TGG | 0.494952 | 3.1:-69272025 | None:intergenic |
TAGTTGTTTGGGTTAAACTC+TGG | 0.495392 | 3.1:-69271997 | None:intergenic |
AGACCTCCCAATGTTGGTGC+TGG | 0.498744 | 3.1:-69273826 | None:intergenic |
CTCAAAGTTCCCGTGTGAGA+TGG | 0.501576 | 3.1:+69274067 | MS.gene75535:CDS |
CAATCCTATTGTGGTTTACC+CGG | 0.502060 | 3.1:-69272998 | None:intergenic |
TAGGGAATACCGACGGCGAC+TGG | 0.502108 | 3.1:-69272030 | None:intergenic |
ACGGAGCCAATTCCAGTGGC+GGG | 0.502691 | 3.1:+69274140 | MS.gene75535:CDS |
GGAAGAAGGTCAAGATCATA+GGG | 0.510176 | 3.1:+69274208 | MS.gene75535:CDS |
GAAAATCGCCGTCGCGGGGA+AGG | 0.520245 | 3.1:-69272927 | None:intergenic |
GCATAGGGTGGGTAGGGGTA+GGG | 0.522118 | 3.1:-69272048 | None:intergenic |
GGCGGCGTGACGGCATAGGG+TGG | 0.523616 | 3.1:-69272060 | None:intergenic |
TGAAGTCAGAGCCGTTCAAA+CGG | 0.524289 | 3.1:+69272179 | MS.gene75535:CDS |
GGTTCAATGGGTTCATTGAA+GGG | 0.524979 | 3.1:+69273020 | MS.gene75535:CDS |
ACGGAATGAGTCCGTTTGAA+CGG | 0.525732 | 3.1:-69272190 | None:intergenic |
TAGAATCTTAGCGTTGCCTC+AGG | 0.525923 | 3.1:-69273794 | None:intergenic |
CCATTGAACCAATCCTATTG+TGG | 0.528406 | 3.1:-69273007 | None:intergenic |
AGGCCTTCCAGCACCAACAT+TGG | 0.531003 | 3.1:+69273819 | MS.gene75535:CDS |
TAGGAGCAATTAAGGAAGTG+AGG | 0.533444 | 3.1:+69272703 | MS.gene75535:intron |
CGGGTAAACCACAATAGGAT+TGG | 0.535306 | 3.1:+69272999 | MS.gene75535:CDS |
CTCCCAATGTTGGTGCTGGA+AGG | 0.535713 | 3.1:-69273822 | None:intergenic |
CCGCCGCCAGGTCTCGTCGC+CGG | 0.539793 | 3.1:+69272354 | MS.gene75535:CDS |
GAGATAATTGTGGTGAATGA+TGG | 0.540940 | 3.1:-69272956 | None:intergenic |
TGCAATGAGCAGCTAGGCGA+CGG | 0.544239 | 3.1:+69273357 | MS.gene75535:CDS |
GGAAAGCGCTTGGAGTTGGA+GGG | 0.544494 | 3.1:+69273091 | MS.gene75535:CDS |
GCGGCGTGACGGCATAGGGT+GGG | 0.552470 | 3.1:-69272059 | None:intergenic |
AAGGCATTGAAAGAATTGAA+TGG | 0.554759 | 3.1:+69272789 | MS.gene75535:CDS |
AGGAGCAATTAAGGAAGTGA+GGG | 0.556032 | 3.1:+69272704 | MS.gene75535:intron |
TAGATGCGGCGGCGGCGTGA+CGG | 0.556131 | 3.1:-69272070 | None:intergenic |
TAAGAGTTTGACATTTAACC+GGG | 0.558889 | 3.1:+69272980 | MS.gene75535:CDS |
ATGGTGGATAGATGCGGCGG+CGG | 0.559637 | 3.1:-69272078 | None:intergenic |
AAAATTTGGGAATAAGAAAG+AGG | 0.561489 | 3.1:-69272312 | None:intergenic |
AATCGCCGTCGCGGGGAAGG+AGG | 0.565397 | 3.1:-69272924 | None:intergenic |
GTAGCTGATGAGATGGAAGA+AGG | 0.569726 | 3.1:+69274194 | MS.gene75535:CDS |
GTCAATTGTTTCCCATCTCG+AGG | 0.569995 | 3.1:-69274119 | None:intergenic |
GAAGGTCAAGATCATAGGGT+AGG | 0.572001 | 3.1:+69274212 | MS.gene75535:CDS |
GAGCAGTTATGACTCCGTTA+CGG | 0.572447 | 3.1:-69272209 | None:intergenic |
CCGGCGACGAGACCTGGCGG+CGG | 0.574051 | 3.1:-69272354 | None:intergenic |
GGTTAAACTCTGGAGCAGTA+GGG | 0.575682 | 3.1:-69271987 | None:intergenic |
CAAGATCATAGGGTAGGTAG+TGG | 0.577368 | 3.1:+69274218 | MS.gene75535:CDS |
TCGGAGGTCAGTTTCAGGGG+TGG | 0.580403 | 3.1:-69272136 | None:intergenic |
TGATATTAGACACGCAGAGA+CGG | 0.582057 | 3.1:+69272239 | MS.gene75535:CDS |
AGTTAAAGACCTCCCAATGT+TGG | 0.586318 | 3.1:-69273832 | None:intergenic |
CTTACTTAAAATCTATAGGA+AGG | 0.588507 | 3.1:-69273410 | None:intergenic |
GACGGAGCCAATTCCAGTGG+CGG | 0.594560 | 3.1:+69274139 | MS.gene75535:CDS |
AATACGCAGCACAGAGGACG+TGG | 0.596568 | 3.1:-69272284 | None:intergenic |
GATCATAGGGTAGGTAGTGG+TGG | 0.598738 | 3.1:+69274221 | MS.gene75535:CDS |
TCCATCTCATCAGCTACAGA+AGG | 0.601752 | 3.1:-69274188 | None:intergenic |
AGGACTAAGGAGAATAGAGC+GGG | 0.604231 | 3.1:-69272106 | None:intergenic |
ATCCACCTCCTTCCCCGCGA+CGG | 0.605475 | 3.1:+69272919 | MS.gene75535:CDS |
TGGAGAAAATCGCCGTCGCG+GGG | 0.607343 | 3.1:-69272931 | None:intergenic |
AAATTTGGGAATAAGAAAGA+GGG | 0.608481 | 3.1:-69272311 | None:intergenic |
AGATAATGCTCCATCTCACA+CGG | 0.611046 | 3.1:-69274077 | None:intergenic |
GTGGGTATGGTGGATAGATG+CGG | 0.612880 | 3.1:-69272084 | None:intergenic |
TCGAGATGGGAAACAATTGA+CGG | 0.613818 | 3.1:+69274121 | MS.gene75535:CDS |
TCCTTCTGTAGCTGATGAGA+TGG | 0.622229 | 3.1:+69274187 | MS.gene75535:CDS |
CGTGGAGAAAATCGCCGTCG+CGG | 0.622679 | 3.1:-69272933 | None:intergenic |
GTACACTGCAATGAGCAGCT+AGG | 0.623158 | 3.1:+69273351 | MS.gene75535:CDS |
ACTAAGGAGAATAGAGCGGG+TGG | 0.623589 | 3.1:-69272103 | None:intergenic |
CGAGGTGGTGAAAACACCAC+TGG | 0.627538 | 3.1:-69274101 | None:intergenic |
GTTCATTGAAGGGTGAAGAG+AGG | 0.627589 | 3.1:+69273030 | MS.gene75535:CDS |
GAACTCTTGCGTATGTGAGT+TGG | 0.629637 | 3.1:-69273868 | None:intergenic |
AAGGTACACAAAGTCATAGG+AGG | 0.633001 | 3.1:-69273391 | None:intergenic |
CGGAGCCAATTCCAGTGGCG+GGG | 0.637866 | 3.1:+69274141 | MS.gene75535:CDS |
TATAGGAACAAATGCAACGT+GGG | 0.641721 | 3.1:+69273746 | MS.gene75535:intron |
GGCAACGCTAAGATTCTACA+AGG | 0.648560 | 3.1:+69273799 | MS.gene75535:CDS |
GACGTGGTGAGTGCGAATAG+CGG | 0.651850 | 3.1:-69272268 | None:intergenic |
AGGAAGTGAGGGATACACCA+TGG | 0.653479 | 3.1:+69272715 | MS.gene75535:CDS |
AATTGTGGTGAATGATGGCG+TGG | 0.654829 | 3.1:-69272951 | None:intergenic |
AATTGTTTCCCATCTCGAGG+TGG | 0.655393 | 3.1:-69274116 | None:intergenic |
CTTCCAGCACCAACATTGGG+AGG | 0.657486 | 3.1:+69273823 | MS.gene75535:CDS |
CTAAGGAGAATAGAGCGGGT+GGG | 0.672614 | 3.1:-69272102 | None:intergenic |
TGTGAATATGACATCTCCTG+AGG | 0.673075 | 3.1:+69273778 | MS.gene75535:CDS |
ATTCCCATACCAGTCGCCGT+CGG | 0.681084 | 3.1:+69272021 | MS.gene75535:CDS |
AAACTCTTATGAGATAATTG+TGG | 0.683374 | 3.1:-69272966 | None:intergenic |
CAAACGGACTCATTCCGTAA+CGG | 0.689626 | 3.1:+69272195 | MS.gene75535:CDS |
TCTAGGATCAGATTCAACAA+TGG | 0.693384 | 3.1:-69273162 | None:intergenic |
CAGGACTAAGGAGAATAGAG+CGG | 0.701567 | 3.1:-69272107 | None:intergenic |
GATAATGCTCCATCTCACAC+GGG | 0.708028 | 3.1:-69274076 | None:intergenic |
ATTGACGGAGCCAATTCCAG+TGG | 0.712659 | 3.1:+69274136 | MS.gene75535:CDS |
GATGGAGCATTATCTGCCAG+TGG | 0.712737 | 3.1:+69274085 | MS.gene75535:CDS |
ACACCGGCGACGAGACCTGG+CGG | 0.715350 | 3.1:-69272357 | None:intergenic |
GGTATGGTGGATAGATGCGG+CGG | 0.718859 | 3.1:-69272081 | None:intergenic |
ATATAGGAACAAATGCAACG+TGG | 0.745597 | 3.1:+69273745 | MS.gene75535:intron |
GGTTGAAATACGCAGCACAG+AGG | 0.761263 | 3.1:-69272290 | None:intergenic |
GTAGGGGTAGGGAATACCGA+CGG | 0.774683 | 3.1:-69272037 | None:intergenic |
GCTCATTGCAGTGTACACAG+TGG | 0.859735 | 3.1:-69273344 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TACATAATAATAAAATAATG+TGG | - | chr3.1:69273649-69273668 | None:intergenic | 10.0% |
!!! | ATTTTGTTTTTAATGATTAT+AGG | + | chr3.1:69272684-69272703 | MS.gene75535:intron | 10.0% |
!!! | TGTATTTTTATTTATGAAAA+GGG | + | chr3.1:69274014-69274033 | MS.gene75535:intron | 10.0% |
!!! | TTATTTTATTATGTGAAATT+TGG | + | chr3.1:69273278-69273297 | MS.gene75535:intron | 10.0% |
!! | ATTACTTACTTAAAATCTAT+AGG | - | chr3.1:69273417-69273436 | None:intergenic | 15.0% |
!!! | GTGTATTTTTATTTATGAAA+AGG | + | chr3.1:69274013-69274032 | MS.gene75535:intron | 15.0% |
!! | AAAGAATGAAAAAGCTTAAT+AGG | + | chr3.1:69272595-69272614 | MS.gene75535:intron | 20.0% |
!! | AATAATATACTGCTACTATA+CGG | - | chr3.1:69273679-69273698 | None:intergenic | 20.0% |
!! | ACCAAATATATATAATGTAG+TGG | - | chr3.1:69273904-69273923 | None:intergenic | 20.0% |
!! | ACCACTACATTATATATATT+TGG | + | chr3.1:69273900-69273919 | MS.gene75535:intron | 20.0% |
!! | ATCTACCAAAAAAACAATAA+TGG | - | chr3.1:69273457-69273476 | None:intergenic | 20.0% |
!! | ATTATTATTTAGTGTTGTGA+TGG | + | chr3.1:69273693-69273712 | MS.gene75535:intron | 20.0% |
!! | TCTACCAAAAAAACAATAAT+GGG | - | chr3.1:69273456-69273475 | None:intergenic | 20.0% |
!! | TTACTAAACTCAATAGTAAT+TGG | - | chr3.1:69272834-69272853 | None:intergenic | 20.0% |
!!! | TTTTATTTATGAAAAGGGTT+TGG | + | chr3.1:69274019-69274038 | MS.gene75535:intron | 20.0% |
! | AAAACATGAATGAGTAAAAG+TGG | - | chr3.1:69272656-69272675 | None:intergenic | 25.0% |
! | AAAATTTGGGAATAAGAAAG+AGG | - | chr3.1:69272315-69272334 | None:intergenic | 25.0% |
! | AAACATGAATGAGTAAAAGT+GGG | - | chr3.1:69272655-69272674 | None:intergenic | 25.0% |
! | AAACTCTTATGAGATAATTG+TGG | - | chr3.1:69272969-69272988 | None:intergenic | 25.0% |
! | AAATTTGGGAATAAGAAAGA+GGG | - | chr3.1:69272314-69272333 | None:intergenic | 25.0% |
! | AATGATTATAGGAGCAATTA+AGG | + | chr3.1:69272695-69272714 | MS.gene75535:intron | 25.0% |
! | ATAAGAGTTTGACATTTAAC+CGG | + | chr3.1:69272979-69272998 | MS.gene75535:CDS | 25.0% |
! | ATGACAAATCTGTGATATAT+AGG | + | chr3.1:69273729-69273748 | MS.gene75535:intron | 25.0% |
! | CAATGCACATTAAAAAAAGA+CGG | - | chr3.1:69273228-69273247 | None:intergenic | 25.0% |
! | CTTACTTAAAATCTATAGGA+AGG | - | chr3.1:69273413-69273432 | None:intergenic | 25.0% |
! | GGATTAAGGTTGAAATTAAA+TGG | - | chr3.1:69272903-69272922 | None:intergenic | 25.0% |
! | GTCTAAATTGAAAACAACTA+GGG | - | chr3.1:69272430-69272449 | None:intergenic | 25.0% |
! | TTATTAGAGATGTAAGCATT+GGG | - | chr3.1:69272879-69272898 | None:intergenic | 25.0% |
! | TTTAAGTAAAAAACCGTGAT+CGG | - | chr3.1:69273532-69273551 | None:intergenic | 25.0% |
!! | AAAAACAATAATGGGACATA+AGG | - | chr3.1:69273448-69273467 | None:intergenic | 25.0% |
!! | GGATTAGAATGAAATGATTT+TGG | - | chr3.1:69272858-69272877 | None:intergenic | 25.0% |
!!! | ATGTCCCATTATTGTTTTTT+TGG | + | chr3.1:69273449-69273468 | MS.gene75535:intron | 25.0% |
!!! | CATTTGAGTTAGAATTTTTG+AGG | + | chr3.1:69273569-69273588 | MS.gene75535:intron | 25.0% |
!!! | TCTCATTTCTGAAACATAAA+AGG | - | chr3.1:69272548-69272567 | None:intergenic | 25.0% |
AAAACATACCCAACAAATAC+AGG | + | chr3.1:69273201-69273220 | MS.gene75535:CDS | 30.0% | |
AACATGAATGAGTAAAAGTG+GGG | - | chr3.1:69272654-69272673 | None:intergenic | 30.0% | |
CGTCTAAATTGAAAACAACT+AGG | - | chr3.1:69272431-69272450 | None:intergenic | 30.0% | |
CTACTTTGAACTCTAACAAA+AGG | - | chr3.1:69273059-69273078 | None:intergenic | 30.0% | |
CTTATTAGAGATGTAAGCAT+TGG | - | chr3.1:69272880-69272899 | None:intergenic | 30.0% | |
TAAGAGTTTGACATTTAACC+GGG | + | chr3.1:69272980-69272999 | MS.gene75535:CDS | 30.0% | |
TTGAATGGCAAAGAGATTAA+TGG | + | chr3.1:69272804-69272823 | MS.gene75535:CDS | 30.0% | |
! | TTCAAAGTAGAGAGAGTTTT+GGG | + | chr3.1:69273069-69273088 | MS.gene75535:CDS | 30.0% |
!! | AAGGCATTGAAAGAATTGAA+TGG | + | chr3.1:69272789-69272808 | MS.gene75535:CDS | 30.0% |
ACAAAGTCATAGGAGGATAA+AGG | - | chr3.1:69273387-69273406 | None:intergenic | 35.0% | |
AGTATCAGACAGTACATAGT+GGG | - | chr3.1:69272394-69272413 | None:intergenic | 35.0% | |
ATATAGGAACAAATGCAACG+TGG | + | chr3.1:69273745-69273764 | MS.gene75535:intron | 35.0% | |
CGAAAAGATCTTTCAGCTTT+CGG | + | chr3.1:69272156-69272175 | MS.gene75535:CDS | 35.0% | |
GAAGTTACTGTTGAATATGC+TGG | + | chr3.1:69273317-69273336 | MS.gene75535:CDS | 35.0% | |
GAGATAATTGTGGTGAATGA+TGG | - | chr3.1:69272959-69272978 | None:intergenic | 35.0% | |
GTATGGGAATGTAGTTGTTT+GGG | - | chr3.1:69272011-69272030 | None:intergenic | 35.0% | |
TATAGGAACAAATGCAACGT+GGG | + | chr3.1:69273746-69273765 | MS.gene75535:intron | 35.0% | |
TTTATCATGAGAGTCGTTCT+AGG | - | chr3.1:69273182-69273201 | None:intergenic | 35.0% | |
! | ACTCGACTTCCAATTTTTGT+CGG | - | chr3.1:69273501-69273520 | None:intergenic | 35.0% |
! | CGAAAGCTGAAAGATCTTTT+CGG | - | chr3.1:69272158-69272177 | None:intergenic | 35.0% |
! | GTTCAAAGTAGAGAGAGTTT+TGG | + | chr3.1:69273068-69273087 | MS.gene75535:CDS | 35.0% |
! | TAGTTGTTTGGGTTAAACTC+TGG | - | chr3.1:69272000-69272019 | None:intergenic | 35.0% |
! | TCAAAGTAGAGAGAGTTTTG+GGG | + | chr3.1:69273070-69273089 | MS.gene75535:CDS | 35.0% |
! | TCTAGGATCAGATTCAACAA+TGG | - | chr3.1:69273165-69273184 | None:intergenic | 35.0% |
!! | AATTTTTGAGGATAGCGCTT+AGG | + | chr3.1:69273581-69273600 | MS.gene75535:intron | 35.0% |
!! | CACAATAGGATTGGTTCAAT+GGG | + | chr3.1:69273008-69273027 | MS.gene75535:CDS | 35.0% |
!!! | CGACAAGTTTTTGAAGCTTT+TGG | + | chr3.1:69272474-69272493 | MS.gene75535:intron | 35.0% |
AAAGACGGACCTGTATTTGT+TGG | - | chr3.1:69273213-69273232 | None:intergenic | 40.0% | |
AACAAATGCAACGTGGGATA+TGG | + | chr3.1:69273752-69273771 | MS.gene75535:CDS | 40.0% | |
AAGACGGACCTGTATTTGTT+GGG | - | chr3.1:69273212-69273231 | None:intergenic | 40.0% | |
AAGGTACACAAAGTCATAGG+AGG | - | chr3.1:69273394-69273413 | None:intergenic | 40.0% | |
AGATAATGCTCCATCTCACA+CGG | - | chr3.1:69274080-69274099 | None:intergenic | 40.0% | |
AGGAGCAATTAAGGAAGTGA+GGG | + | chr3.1:69272704-69272723 | MS.gene75535:intron | 40.0% | |
AGTTAAAGACCTCCCAATGT+TGG | - | chr3.1:69273835-69273854 | None:intergenic | 40.0% | |
CAATCCTATTGTGGTTTACC+CGG | - | chr3.1:69273001-69273020 | None:intergenic | 40.0% | |
CAGTATCAGACAGTACATAG+TGG | - | chr3.1:69272395-69272414 | None:intergenic | 40.0% | |
CCATTGAACCAATCCTATTG+TGG | - | chr3.1:69273010-69273029 | None:intergenic | 40.0% | |
CGACATAAGAGATGCTGAAA+AGG | + | chr3.1:69272770-69272789 | MS.gene75535:CDS | 40.0% | |
CGAGTTTCAAATACCGATCA+CGG | + | chr3.1:69273516-69273535 | MS.gene75535:intron | 40.0% | |
CGTTATGTGACTTACTCATG+TGG | - | chr3.1:69273959-69273978 | None:intergenic | 40.0% | |
CTGTCTGATACTGAGAATCA+AGG | + | chr3.1:69272402-69272421 | MS.gene75535:intron | 40.0% | |
GGAAGAAGGTCAAGATCATA+GGG | + | chr3.1:69274208-69274227 | MS.gene75535:CDS | 40.0% | |
GGTAGATAGACGATGAACTT+CGG | + | chr3.1:69273470-69273489 | MS.gene75535:intron | 40.0% | |
GGTATGGGAATGTAGTTGTT+TGG | - | chr3.1:69272012-69272031 | None:intergenic | 40.0% | |
TAGGAGCAATTAAGGAAGTG+AGG | + | chr3.1:69272703-69272722 | MS.gene75535:intron | 40.0% | |
TATACTGCTACTATACGGCA+CGG | - | chr3.1:69273674-69273693 | None:intergenic | 40.0% | |
TCGAGATGGGAAACAATTGA+CGG | + | chr3.1:69274121-69274140 | MS.gene75535:CDS | 40.0% | |
TGATATTAGACACGCAGAGA+CGG | + | chr3.1:69272239-69272258 | MS.gene75535:CDS | 40.0% | |
TGGAAGAAGGTCAAGATCAT+AGG | + | chr3.1:69274207-69274226 | MS.gene75535:CDS | 40.0% | |
TGTGAATATGACATCTCCTG+AGG | + | chr3.1:69273778-69273797 | MS.gene75535:CDS | 40.0% | |
TTAACCGGGTAAACCACAAT+AGG | + | chr3.1:69272994-69273013 | MS.gene75535:CDS | 40.0% | |
! | AAGCTGAAAGATCTTTTCGG+AGG | - | chr3.1:69272155-69272174 | None:intergenic | 40.0% |
! | AGGAAGGTACACAAAGTCAT+AGG | - | chr3.1:69273397-69273416 | None:intergenic | 40.0% |
! | CTCTGATTCCTTTTCTTCCA+TGG | - | chr3.1:69272735-69272754 | None:intergenic | 40.0% |
! | GGTTCAATGGGTTCATTGAA+GGG | + | chr3.1:69273020-69273039 | MS.gene75535:CDS | 40.0% |
! | TGACTTACTCATGTGGACTA+TGG | - | chr3.1:69273952-69273971 | None:intergenic | 40.0% |
! | TGGTTCAATGGGTTCATTGA+AGG | + | chr3.1:69273019-69273038 | MS.gene75535:CDS | 40.0% |
!! | CCACAATAGGATTGGTTCAA+TGG | + | chr3.1:69273007-69273026 | MS.gene75535:CDS | 40.0% |
AATTGTTTCCCATCTCGAGG+TGG | - | chr3.1:69274119-69274138 | None:intergenic | 45.0% | |
ACGGAATGAGTCCGTTTGAA+CGG | - | chr3.1:69272193-69272212 | None:intergenic | 45.0% | |
ACTCACATACGCAAGAGTTC+AGG | + | chr3.1:69273871-69273890 | MS.gene75535:CDS | 45.0% | |
AGGACTAAGGAGAATAGAGC+GGG | - | chr3.1:69272109-69272128 | None:intergenic | 45.0% | |
ATACTGCTACTATACGGCAC+GGG | - | chr3.1:69273673-69273692 | None:intergenic | 45.0% | |
CAAGATCATAGGGTAGGTAG+TGG | + | chr3.1:69274218-69274237 | MS.gene75535:CDS | 45.0% | |
CAGGACTAAGGAGAATAGAG+CGG | - | chr3.1:69272110-69272129 | None:intergenic | 45.0% | |
CGGGTAAACCACAATAGGAT+TGG | + | chr3.1:69272999-69273018 | MS.gene75535:CDS | 45.0% | |
GAACTCTTGCGTATGTGAGT+TGG | - | chr3.1:69273871-69273890 | None:intergenic | 45.0% | |
GAAGGTCAAGATCATAGGGT+AGG | + | chr3.1:69274212-69274231 | MS.gene75535:CDS | 45.0% | |
GACGTGATGAGCAGAAAAAG+TGG | + | chr3.1:69274248-69274267 | MS.gene75535:CDS | 45.0% | |
GAGCAGTTATGACTCCGTTA+CGG | - | chr3.1:69272212-69272231 | None:intergenic | 45.0% | |
GATAATGCTCCATCTCACAC+GGG | - | chr3.1:69274079-69274098 | None:intergenic | 45.0% | |
GGCAACGCTAAGATTCTACA+AGG | + | chr3.1:69273799-69273818 | MS.gene75535:CDS | 45.0% | |
GGGATACACCATGGAAGAAA+AGG | + | chr3.1:69272724-69272743 | MS.gene75535:CDS | 45.0% | |
GTAGCTGATGAGATGGAAGA+AGG | + | chr3.1:69274194-69274213 | MS.gene75535:CDS | 45.0% | |
GTCAATTGTTTCCCATCTCG+AGG | - | chr3.1:69274122-69274141 | None:intergenic | 45.0% | |
GTGATGAGCAGAAAAAGTGG+CGG | + | chr3.1:69274251-69274270 | MS.gene75535:CDS | 45.0% | |
GTGGCACAAGTCCAAAAGTT+GGG | - | chr3.1:69273630-69273649 | None:intergenic | 45.0% | |
GTTCATTGAAGGGTGAAGAG+AGG | + | chr3.1:69273030-69273049 | MS.gene75535:CDS | 45.0% | |
TAGAATCTTAGCGTTGCCTC+AGG | - | chr3.1:69273797-69273816 | None:intergenic | 45.0% | |
TCCAAAAGTTGGGTAGCACT+TGG | - | chr3.1:69273620-69273639 | None:intergenic | 45.0% | |
TCCATCTCATCAGCTACAGA+AGG | - | chr3.1:69274191-69274210 | None:intergenic | 45.0% | |
TCCTTCTGTAGCTGATGAGA+TGG | + | chr3.1:69274187-69274206 | MS.gene75535:CDS | 45.0% | |
TCGGAAGCTCCGACAAAAAT+TGG | + | chr3.1:69273489-69273508 | MS.gene75535:intron | 45.0% | |
TGAAGTCAGAGCCGTTCAAA+CGG | + | chr3.1:69272179-69272198 | MS.gene75535:CDS | 45.0% | |
TGTGGCACAAGTCCAAAAGT+TGG | - | chr3.1:69273631-69273650 | None:intergenic | 45.0% | |
! | AATTGTGGTGAATGATGGCG+TGG | - | chr3.1:69272954-69272973 | None:intergenic | 45.0% |
! | CAAACGGACTCATTCCGTAA+CGG | + | chr3.1:69272195-69272214 | MS.gene75535:CDS | 45.0% |
! | CTTTTCGGAGGTCAGTTTCA+GGG | - | chr3.1:69272143-69272162 | None:intergenic | 45.0% |
! | TCCAAGTGCTACCCAACTTT+TGG | + | chr3.1:69273616-69273635 | MS.gene75535:intron | 45.0% |
! | TCTTTTCGGAGGTCAGTTTC+AGG | - | chr3.1:69272144-69272163 | None:intergenic | 45.0% |
! | TGTTTTCACCACCTCGAGAT+GGG | + | chr3.1:69274108-69274127 | MS.gene75535:CDS | 45.0% |
! | TTTTCGGAGGTCAGTTTCAG+GGG | - | chr3.1:69272142-69272161 | None:intergenic | 45.0% |
!! | GGTTAAACTCTGGAGCAGTA+GGG | - | chr3.1:69271990-69272009 | None:intergenic | 45.0% |
AACTTGTCGCAGCTGATCAG+AGG | - | chr3.1:69272463-69272482 | None:intergenic | 50.0% | |
ACTAAGGAGAATAGAGCGGG+TGG | - | chr3.1:69272106-69272125 | None:intergenic | 50.0% | |
AGCAGAAAAAGTGGCGGCAT+AGG | + | chr3.1:69274257-69274276 | MS.gene75535:CDS | 50.0% | |
AGGAAGTGAGGGATACACCA+TGG | + | chr3.1:69272715-69272734 | MS.gene75535:CDS | 50.0% | |
ATTGACGGAGCCAATTCCAG+TGG | + | chr3.1:69274136-69274155 | MS.gene75535:CDS | 50.0% | |
CTAAGGAGAATAGAGCGGGT+GGG | - | chr3.1:69272105-69272124 | None:intergenic | 50.0% | |
CTCAAAGTTCCCGTGTGAGA+TGG | + | chr3.1:69274067-69274086 | MS.gene75535:CDS | 50.0% | |
GCGGGGAACATGCTACAAAT+TGG | + | chr3.1:69274158-69274177 | MS.gene75535:CDS | 50.0% | |
GCTCATTGCAGTGTACACAG+TGG | - | chr3.1:69273347-69273366 | None:intergenic | 50.0% | |
GGTTGAAATACGCAGCACAG+AGG | - | chr3.1:69272293-69272312 | None:intergenic | 50.0% | |
GTACACTGCAATGAGCAGCT+AGG | + | chr3.1:69273351-69273370 | MS.gene75535:CDS | 50.0% | |
TAGCGGCGTGGGGAAAATTT+GGG | - | chr3.1:69272328-69272347 | None:intergenic | 50.0% | |
! | GATCATAGGGTAGGTAGTGG+TGG | + | chr3.1:69274221-69274240 | MS.gene75535:CDS | 50.0% |
! | GATGGAGCATTATCTGCCAG+TGG | + | chr3.1:69274085-69274104 | MS.gene75535:CDS | 50.0% |
! | GTGTTTTCACCACCTCGAGA+TGG | + | chr3.1:69274107-69274126 | MS.gene75535:CDS | 50.0% |
!! | CTCTGGAGCAGTAGGGTTTA+AGG | - | chr3.1:69271983-69272002 | None:intergenic | 50.0% |
!! | GGGTTAAACTCTGGAGCAGT+AGG | - | chr3.1:69271991-69272010 | None:intergenic | 50.0% |
!! | GTGGGTATGGTGGATAGATG+CGG | - | chr3.1:69272087-69272106 | None:intergenic | 50.0% |
!!! | AGAGTTTTGGGGAAAGCGCT+TGG | + | chr3.1:69273081-69273100 | MS.gene75535:CDS | 50.0% |
AATACCGACGGCGACTGGTA+TGG | - | chr3.1:69272028-69272047 | None:intergenic | 55.0% | |
AATACGCAGCACAGAGGACG+TGG | - | chr3.1:69272287-69272306 | None:intergenic | 55.0% | |
AATAGAGCGGGTGGGTATGG+TGG | - | chr3.1:69272097-69272116 | None:intergenic | 55.0% | |
AGACCTCCCAATGTTGGTGC+TGG | - | chr3.1:69273829-69273848 | None:intergenic | 55.0% | |
AGGCCTTCCAGCACCAACAT+TGG | + | chr3.1:69273819-69273838 | MS.gene75535:CDS | 55.0% | |
ATACCGACGGCGACTGGTAT+GGG | - | chr3.1:69272027-69272046 | None:intergenic | 55.0% | |
ATGTTCCCCGCCACTGGAAT+TGG | - | chr3.1:69274149-69274168 | None:intergenic | 55.0% | |
ATTCCCATACCAGTCGCCGT+CGG | + | chr3.1:69272021-69272040 | MS.gene75535:CDS | 55.0% | |
CGAGGTGGTGAAAACACCAC+TGG | - | chr3.1:69274104-69274123 | None:intergenic | 55.0% | |
CTTCCAGCACCAACATTGGG+AGG | + | chr3.1:69273823-69273842 | MS.gene75535:CDS | 55.0% | |
GACGTGGTGAGTGCGAATAG+CGG | - | chr3.1:69272271-69272290 | None:intergenic | 55.0% | |
GAGAATAGAGCGGGTGGGTA+TGG | - | chr3.1:69272100-69272119 | None:intergenic | 55.0% | |
GGCCTTCCAGCACCAACATT+GGG | + | chr3.1:69273820-69273839 | MS.gene75535:CDS | 55.0% | |
GTAGCGGCGTGGGGAAAATT+TGG | - | chr3.1:69272329-69272348 | None:intergenic | 55.0% | |
GTAGGGGTAGGGAATACCGA+CGG | - | chr3.1:69272040-69272059 | None:intergenic | 55.0% | |
TGCAATGAGCAGCTAGGCGA+CGG | + | chr3.1:69273357-69273376 | MS.gene75535:CDS | 55.0% | |
! | AAAGCGCTTGGAGTTGGAGG+GGG | + | chr3.1:69273093-69273112 | MS.gene75535:CDS | 55.0% |
!! | AGTACATAGTGGGCCCACAG+TGG | - | chr3.1:69272384-69272403 | None:intergenic | 55.0% |
!! | CTCCCAATGTTGGTGCTGGA+AGG | - | chr3.1:69273825-69273844 | None:intergenic | 55.0% |
!! | GAAAGCGCTTGGAGTTGGAG+GGG | + | chr3.1:69273092-69273111 | MS.gene75535:CDS | 55.0% |
!! | GGAAAGCGCTTGGAGTTGGA+GGG | + | chr3.1:69273091-69273110 | MS.gene75535:CDS | 55.0% |
!! | GGTATGGTGGATAGATGCGG+CGG | - | chr3.1:69272084-69272103 | None:intergenic | 55.0% |
!! | TTGGGGAAAGCGCTTGGAGT+TGG | + | chr3.1:69273087-69273106 | MS.gene75535:CDS | 55.0% |
ACGGAGCCAATTCCAGTGGC+GGG | + | chr3.1:69274140-69274159 | MS.gene75535:CDS | 60.0% | |
AGGTCAGTTTCAGGGGTGGG+AGG | - | chr3.1:69272135-69272154 | None:intergenic | 60.0% | |
CGGAGGTCAGTTTCAGGGGT+GGG | - | chr3.1:69272138-69272157 | None:intergenic | 60.0% | |
CGTGGAGAAAATCGCCGTCG+CGG | - | chr3.1:69272936-69272955 | None:intergenic | 60.0% | |
GACGGAGCCAATTCCAGTGG+CGG | + | chr3.1:69274139-69274158 | MS.gene75535:CDS | 60.0% | |
GCATAGGGTGGGTAGGGGTA+GGG | - | chr3.1:69272051-69272070 | None:intergenic | 60.0% | |
GGTCAGTTTCAGGGGTGGGA+GGG | - | chr3.1:69272134-69272153 | None:intergenic | 60.0% | |
GTCAGTTTCAGGGGTGGGAG+GGG | - | chr3.1:69272133-69272152 | None:intergenic | 60.0% | |
GTGACGGCATAGGGTGGGTA+GGG | - | chr3.1:69272057-69272076 | None:intergenic | 60.0% | |
GTGGAGAAAATCGCCGTCGC+GGG | - | chr3.1:69272935-69272954 | None:intergenic | 60.0% | |
TAGGGAATACCGACGGCGAC+TGG | - | chr3.1:69272033-69272052 | None:intergenic | 60.0% | |
TCGGAGGTCAGTTTCAGGGG+TGG | - | chr3.1:69272139-69272158 | None:intergenic | 60.0% | |
TGACGGCATAGGGTGGGTAG+GGG | - | chr3.1:69272056-69272075 | None:intergenic | 60.0% | |
TGGAGAAAATCGCCGTCGCG+GGG | - | chr3.1:69272934-69272953 | None:intergenic | 60.0% | |
TGTAGCATGTTCCCCGCCAC+TGG | - | chr3.1:69274155-69274174 | None:intergenic | 60.0% | |
!! | ATGGTGGATAGATGCGGCGG+CGG | - | chr3.1:69272081-69272100 | None:intergenic | 60.0% |
!! | GCGGGGAAGGAGGTGGATTA+AGG | - | chr3.1:69272917-69272936 | None:intergenic | 60.0% |
!! | GGGAAAGCGCTTGGAGTTGG+AGG | + | chr3.1:69273090-69273109 | MS.gene75535:CDS | 60.0% |
ATCCACCTCCTTCCCCGCGA+CGG | + | chr3.1:69272919-69272938 | MS.gene75535:CDS | 65.0% | |
CGGAGCCAATTCCAGTGGCG+GGG | + | chr3.1:69274141-69274160 | MS.gene75535:CDS | 65.0% | |
CGTGACGGCATAGGGTGGGT+AGG | - | chr3.1:69272058-69272077 | None:intergenic | 65.0% | |
GAAAATCGCCGTCGCGGGGA+AGG | - | chr3.1:69272930-69272949 | None:intergenic | 65.0% | |
GGCATAGGGTGGGTAGGGGT+AGG | - | chr3.1:69272052-69272071 | None:intergenic | 65.0% | |
AATCGCCGTCGCGGGGAAGG+AGG | - | chr3.1:69272927-69272946 | None:intergenic | 70.0% | |
ACACCGGCGACGAGACCTGG+CGG | - | chr3.1:69272360-69272379 | None:intergenic | 70.0% | |
GCGGCGTGACGGCATAGGGT+GGG | - | chr3.1:69272062-69272081 | None:intergenic | 70.0% | |
GGGTGGGAGGGGCAGGACTA+AGG | - | chr3.1:69272122-69272141 | None:intergenic | 70.0% | |
GTGGGCCCACAGTGGCACAC+CGG | - | chr3.1:69272376-69272395 | None:intergenic | 70.0% | |
GTTTCAGGGGTGGGAGGGGC+AGG | - | chr3.1:69272129-69272148 | None:intergenic | 70.0% | |
TAGATGCGGCGGCGGCGTGA+CGG | - | chr3.1:69272073-69272092 | None:intergenic | 70.0% | |
! | CGTCGCCGGTGTGCCACTGT+GGG | + | chr3.1:69272368-69272387 | MS.gene75535:intron | 70.0% |
! | TCGTCGCCGGTGTGCCACTG+TGG | + | chr3.1:69272367-69272386 | MS.gene75535:intron | 70.0% |
GGCACACCGGCGACGAGACC+TGG | - | chr3.1:69272363-69272382 | None:intergenic | 75.0% | |
GGCGGCGGCGTGACGGCATA+GGG | - | chr3.1:69272066-69272085 | None:intergenic | 75.0% | |
GGCGGCGTGACGGCATAGGG+TGG | - | chr3.1:69272063-69272082 | None:intergenic | 75.0% | |
! | ACGAGACCTGGCGGCGGCGG+AGG | - | chr3.1:69272351-69272370 | None:intergenic | 80.0% |
! | CCGCCGCCAGGTCTCGTCGC+CGG | + | chr3.1:69272354-69272373 | MS.gene75535:CDS | 80.0% |
! | CCGGCGACGAGACCTGGCGG+CGG | - | chr3.1:69272357-69272376 | None:intergenic | 80.0% |
! | CCTGGCGGCGGCGGAGGTAG+CGG | - | chr3.1:69272345-69272364 | None:intergenic | 80.0% |
! | CGCCGTCGCGGGGAAGGAGG+TGG | - | chr3.1:69272924-69272943 | None:intergenic | 80.0% |
! | CGGCGGCGGCGTGACGGCAT+AGG | - | chr3.1:69272067-69272086 | None:intergenic | 80.0% |
! | GCGACGAGACCTGGCGGCGG+CGG | - | chr3.1:69272354-69272373 | None:intergenic | 80.0% |
!! | GCGGCGGAGGTAGCGGCGTG+GGG | - | chr3.1:69272338-69272357 | None:intergenic | 80.0% |
!! | GGCGGCGGAGGTAGCGGCGT+GGG | - | chr3.1:69272339-69272358 | None:intergenic | 80.0% |
! | CCGCTACCTCCGCCGCCGCC+AGG | + | chr3.1:69272342-69272361 | MS.gene75535:CDS | 85.0% |
!! | CGGCGGCGGAGGTAGCGGCG+TGG | - | chr3.1:69272340-69272359 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 69271970 | 69274316 | 69271970 | ID=MS.gene75535 |
chr3.1 | mRNA | 69271970 | 69274316 | 69271970 | ID=MS.gene75535.t1;Parent=MS.gene75535 |
chr3.1 | exon | 69271970 | 69272375 | 69271970 | ID=MS.gene75535.t1.exon1;Parent=MS.gene75535.t1 |
chr3.1 | CDS | 69271970 | 69272375 | 69271970 | ID=cds.MS.gene75535.t1;Parent=MS.gene75535.t1 |
chr3.1 | exon | 69272706 | 69273222 | 69272706 | ID=MS.gene75535.t1.exon2;Parent=MS.gene75535.t1 |
chr3.1 | CDS | 69272706 | 69273222 | 69272706 | ID=cds.MS.gene75535.t1;Parent=MS.gene75535.t1 |
chr3.1 | exon | 69273314 | 69273427 | 69273314 | ID=MS.gene75535.t1.exon3;Parent=MS.gene75535.t1 |
chr3.1 | CDS | 69273314 | 69273427 | 69273314 | ID=cds.MS.gene75535.t1;Parent=MS.gene75535.t1 |
chr3.1 | exon | 69273751 | 69273892 | 69273751 | ID=MS.gene75535.t1.exon4;Parent=MS.gene75535.t1 |
chr3.1 | CDS | 69273751 | 69273892 | 69273751 | ID=cds.MS.gene75535.t1;Parent=MS.gene75535.t1 |
chr3.1 | exon | 69274035 | 69274316 | 69274035 | ID=MS.gene75535.t1.exon5;Parent=MS.gene75535.t1 |
chr3.1 | CDS | 69274035 | 69274316 | 69274035 | ID=cds.MS.gene75535.t1;Parent=MS.gene75535.t1 |
Gene Sequence |
Protein sequence |