Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76224.t1 | XP_013470280.1 | 93.8 | 210 | 13 | 0 | 1 | 210 | 54 | 263 | 4.00E-102 | 380.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76224.t1 | Q9LZ23 | 83.2 | 179 | 30 | 0 | 32 | 210 | 106 | 284 | 1.8e-79 | 297.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76224.t1 | A0A072VSB7 | 93.8 | 210 | 13 | 0 | 1 | 210 | 54 | 263 | 2.9e-102 | 380.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050216 | MS.gene76224 | -0.804126 | 2.51E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene76224 | -0.80148 | 8.83E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene76224 | -0.803439 | 3.48E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene76224 | -0.811691 | 6.17E-51 | -1.69E-46 |
| MS.gene050871 | MS.gene76224 | -0.812769 | 3.59E-51 | -1.69E-46 |
| MS.gene051026 | MS.gene76224 | 0.831837 | 1.33E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene76224 | -0.80355 | 3.30E-49 | -1.69E-46 |
| MS.gene055111 | MS.gene76224 | 0.801463 | 8.90E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene76224 | -0.810801 | 9.62E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76224.t1 | MTR_1g112170 | 97.525 | 202 | 5 | 0 | 9 | 210 | 62 | 263 | 3.13e-142 | 399 |
| MS.gene76224.t1 | MTR_1g112170 | 98.295 | 176 | 3 | 0 | 9 | 184 | 62 | 237 | 1.99e-123 | 350 |
| MS.gene76224.t1 | MTR_2g105090 | 61.735 | 196 | 75 | 0 | 15 | 210 | 78 | 273 | 4.71e-89 | 264 |
| MS.gene76224.t1 | MTR_4g007140 | 60.294 | 204 | 81 | 0 | 5 | 208 | 71 | 274 | 5.66e-89 | 264 |
| MS.gene76224.t1 | MTR_2g105090 | 61.735 | 196 | 75 | 0 | 15 | 210 | 102 | 297 | 6.21e-89 | 265 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76224.t1 | AT5G04740 | 81.538 | 195 | 36 | 0 | 16 | 210 | 90 | 284 | 3.61e-115 | 331 |
| MS.gene76224.t1 | AT1G16880 | 59.091 | 198 | 81 | 0 | 11 | 208 | 74 | 271 | 1.48e-85 | 256 |
| MS.gene76224.t1 | AT5G04740 | 81.373 | 102 | 19 | 0 | 109 | 210 | 82 | 183 | 9.89e-56 | 176 |
| MS.gene76224.t1 | AT1G16880 | 59.829 | 117 | 47 | 0 | 11 | 127 | 74 | 190 | 2.10e-47 | 155 |
| MS.gene76224.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 21 | 195 | 16 | 165 | 5.70e-11 | 61.6 |
| MS.gene76224.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 21 | 195 | 30 | 179 | 7.03e-11 | 61.2 |
| MS.gene76224.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 21 | 195 | 16 | 165 | 7.96e-11 | 61.2 |
| MS.gene76224.t1 | AT3G01990 | 26.857 | 175 | 103 | 3 | 21 | 195 | 30 | 179 | 8.07e-11 | 61.2 |
Find 51 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAAAGCATTAAAAGATT+TGG | 0.224631 | 1.1:-79238286 | MS.gene76224:CDS |
| ATGAAAGCATTAAAAGATTT+GGG | 0.302504 | 1.1:-79238285 | MS.gene76224:CDS |
| TAATTCTTACTGCAGATATC+TGG | 0.325647 | 1.1:-79239173 | MS.gene76224:intron |
| CGAATGCTCTCTAACATATC+AGG | 0.337635 | 1.1:+79237537 | None:intergenic |
| CACTCTACAGCCTCTGATAA+AGG | 0.352368 | 1.1:+79235388 | None:intergenic |
| TGCAACTCATATTCAAGTTA+AGG | 0.354573 | 1.1:-79235923 | MS.gene76224:CDS |
| CTGCAATAGATTGTTGATAA+TGG | 0.357828 | 1.1:+79237509 | None:intergenic |
| GGGTGAAGTGTTTGGCATAA+AGG | 0.378690 | 1.1:-79237262 | MS.gene76224:CDS |
| CATATTCAAGTTAAGGAAGA+TGG | 0.394527 | 1.1:-79235916 | MS.gene76224:CDS |
| GATAAATTTCATGTCAGTTA+TGG | 0.404791 | 1.1:-79235486 | MS.gene76224:CDS |
| CTAGCCCTGGGTGAAGTGTT+TGG | 0.426026 | 1.1:-79237270 | MS.gene76224:CDS |
| ACAATTGTGCAACTTAGCTT+TGG | 0.428631 | 1.1:-79239086 | MS.gene76224:CDS |
| CATAGATGCAAACCTCCTCT+TGG | 0.437658 | 1.1:+79235891 | None:intergenic |
| CTTAGCTTTGGTGATCGTCT+TGG | 0.437985 | 1.1:-79239074 | MS.gene76224:CDS |
| ACCCAGGGCTAGTTGTTCAC+TGG | 0.444688 | 1.1:+79237281 | None:intergenic |
| AGCATTAAAAGATTTGGGAT+TGG | 0.447652 | 1.1:-79238280 | MS.gene76224:CDS |
| TGATATATTGTCAGAGACAC+TGG | 0.474998 | 1.1:-79237576 | MS.gene76224:intron |
| AAATTTCATGTCAGTTATGG+TGG | 0.491300 | 1.1:-79235483 | MS.gene76224:CDS |
| GTCCAGTGAACAACTAGCCC+TGG | 0.492569 | 1.1:-79237283 | MS.gene76224:CDS |
| TTTGGGATTGGATGTTTCAA+AGG | 0.494758 | 1.1:-79238268 | MS.gene76224:CDS |
| TCTTGATCTATCAGTAGTAT+TGG | 0.502060 | 1.1:+79239125 | None:intergenic |
| ATAGATGCAAACCTCCTCTT+GGG | 0.508203 | 1.1:+79235892 | None:intergenic |
| TTGGGATTGGATGTTTCAAA+GGG | 0.510420 | 1.1:-79238267 | MS.gene76224:CDS |
| ATTAAACAGATCAATGTCTC+AGG | 0.515343 | 1.1:-79235454 | MS.gene76224:CDS |
| TCTATCAGTAGTATTGGCAT+TGG | 0.516810 | 1.1:+79239131 | None:intergenic |
| TTGAAAAGCAATTTAGATGT+TGG | 0.523384 | 1.1:-79235420 | MS.gene76224:CDS |
| ATCGAGACAGCAGATAGGCC+AGG | 0.530479 | 1.1:-79235687 | MS.gene76224:CDS |
| CATAAAGGCTCCAGAAAAGA+AGG | 0.531380 | 1.1:-79237247 | MS.gene76224:intron |
| AATTTCATGTCAGTTATGGT+GGG | 0.532815 | 1.1:-79235482 | MS.gene76224:CDS |
| GTTTGATCATCCTTTATCAG+AGG | 0.541528 | 1.1:-79235398 | MS.gene76224:CDS |
| TAGTCATCCTCACTATGGAC+AGG | 0.546862 | 1.1:-79240163 | None:intergenic |
| CAGGCTATCCGACATTCAGC+TGG | 0.558173 | 1.1:-79240144 | MS.gene76224:intron |
| ATATTCAAGTTAAGGAAGAT+GGG | 0.558978 | 1.1:-79235915 | MS.gene76224:CDS |
| ATTATTTCAACTAGCAACCC+TGG | 0.562653 | 1.1:+79235669 | None:intergenic |
| AAGGGAACTGTCTCCACTGA+GGG | 0.564408 | 1.1:-79238249 | MS.gene76224:CDS |
| TCTGCAGGGTTTGATTGCTA+AGG | 0.568190 | 1.1:-79235508 | MS.gene76224:intron |
| TGTACATCGAGACAGCAGAT+AGG | 0.569651 | 1.1:-79235692 | MS.gene76224:CDS |
| TTGCTTCACTGGTCCCTCAG+TGG | 0.572490 | 1.1:+79238236 | None:intergenic |
| ATGAATAACCAGCTGAATGT+CGG | 0.574052 | 1.1:+79240136 | None:intergenic |
| TCCAGTGAACAACTAGCCCT+GGG | 0.584632 | 1.1:-79237282 | MS.gene76224:CDS |
| ATTTCATGTCAGTTATGGTG+GGG | 0.585354 | 1.1:-79235481 | MS.gene76224:CDS |
| TCGAGACAGCAGATAGGCCA+GGG | 0.587797 | 1.1:-79235686 | MS.gene76224:CDS |
| AGGAAGATGGGCCCAAGAGG+AGG | 0.600783 | 1.1:-79235903 | MS.gene76224:intron |
| TCTTGGAGCTCTTCTTGACA+CGG | 0.610014 | 1.1:-79239057 | MS.gene76224:intron |
| TTAAGGAAGATGGGCCCAAG+AGG | 0.615605 | 1.1:-79235906 | MS.gene76224:CDS |
| TATGCCAAACACTTCACCCA+GGG | 0.626733 | 1.1:+79237266 | None:intergenic |
| TTATGCCAAACACTTCACCC+AGG | 0.646264 | 1.1:+79237265 | None:intergenic |
| GATATATTGTCAGAGACACT+GGG | 0.648692 | 1.1:-79237575 | MS.gene76224:intron |
| TGTGAACATTGATGTTGAGT+CGG | 0.660513 | 1.1:-79235631 | MS.gene76224:CDS |
| GTCGGCTGAGATCGATACAG+AGG | 0.702999 | 1.1:-79235613 | MS.gene76224:intron |
| AAAGGGAACTGTCTCCACTG+AGG | 0.707401 | 1.1:-79238250 | MS.gene76224:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTATGTTAATTATTACAA+AGG | - | chr1.1:79237584-79237603 | MS.gene76224:intron | 10.0% |
| !!! | AATAAATAAAGGTATAATAA+TGG | - | chr1.1:79235685-79235704 | MS.gene76224:CDS | 10.0% |
| !!! | TATAATTATTTTAAAGACTA+AGG | + | chr1.1:79238707-79238726 | None:intergenic | 10.0% |
| !!! | TATTATTTTATGTTAATTGA+CGG | - | chr1.1:79236719-79236738 | MS.gene76224:intron | 10.0% |
| !!! | TTAATTATTTGATATTTTTG+TGG | - | chr1.1:79238774-79238793 | MS.gene76224:intron | 10.0% |
| !! | AAAAATAATAAATACTGCAT+TGG | - | chr1.1:79235710-79235729 | MS.gene76224:intron | 15.0% |
| !! | AATACACTTAGTAATAATAT+AGG | + | chr1.1:79236925-79236944 | None:intergenic | 15.0% |
| !! | AATTTAATAATAATTGCAAC+TGG | + | chr1.1:79237782-79237801 | None:intergenic | 15.0% |
| !! | ATACACTTAGTAATAATATA+GGG | + | chr1.1:79236924-79236943 | None:intergenic | 15.0% |
| !! | ATTATTATTGAAAGAACTAA+AGG | - | chr1.1:79239260-79239279 | MS.gene76224:intron | 15.0% |
| !! | TAGGAAAAATTGAAAATTAA+GGG | + | chr1.1:79238201-79238220 | None:intergenic | 15.0% |
| !!! | ATACATATCATTACTATTTT+CGG | - | chr1.1:79236079-79236098 | MS.gene76224:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | - | chr1.1:79235751-79235770 | MS.gene76224:intron | 15.0% |
| !!! | GAATATACGTTATTTATTTT+AGG | - | chr1.1:79238365-79238384 | MS.gene76224:intron | 15.0% |
| !!! | TATATTTATATATTTTGTCC+AGG | - | chr1.1:79238234-79238253 | MS.gene76224:CDS | 15.0% |
| !!! | TGCTTTTTATATTTTACTTT+GGG | - | chr1.1:79239689-79239708 | MS.gene76224:intron | 15.0% |
| !!! | TTGCTTTTTATATTTTACTT+TGG | - | chr1.1:79239688-79239707 | MS.gene76224:intron | 15.0% |
| !! | AAATAACGTATATTCTGTTT+AGG | + | chr1.1:79238360-79238379 | None:intergenic | 20.0% |
| !! | AACATAATAAAACAAACCTT+CGG | + | chr1.1:79237012-79237031 | None:intergenic | 20.0% |
| !! | ATATTTATAAAGAAAACTCG+TGG | + | chr1.1:79238155-79238174 | None:intergenic | 20.0% |
| !! | ATGATATTATCTCTTTATGA+AGG | - | chr1.1:79236985-79237004 | MS.gene76224:intron | 20.0% |
| !! | ATTTATGAACTCTTAGAATT+TGG | + | chr1.1:79238517-79238536 | None:intergenic | 20.0% |
| !! | CAAATTATAAAAATCAGTTG+GGG | + | chr1.1:79239753-79239772 | None:intergenic | 20.0% |
| !! | GCAAATTATAAAAATCAGTT+GGG | + | chr1.1:79239754-79239773 | None:intergenic | 20.0% |
| !! | GGATGAAATTCAATAAATAA+AGG | - | chr1.1:79235674-79235693 | MS.gene76224:CDS | 20.0% |
| !! | GTAGGAAAAATTGAAAATTA+AGG | + | chr1.1:79238202-79238221 | None:intergenic | 20.0% |
| !! | TAAGAAATACAGTTACTTAT+TGG | - | chr1.1:79237803-79237822 | MS.gene76224:intron | 20.0% |
| !! | TACACTTAGTAATAATATAG+GGG | + | chr1.1:79236923-79236942 | None:intergenic | 20.0% |
| !! | TATAAAAGTTGCTAATTACA+AGG | + | chr1.1:79238131-79238150 | None:intergenic | 20.0% |
| !! | TGCAAATTATAAAAATCAGT+TGG | + | chr1.1:79239755-79239774 | None:intergenic | 20.0% |
| !! | TGCAATAAAGTGATAATAAT+GGG | + | chr1.1:79236024-79236043 | None:intergenic | 20.0% |
| !! | TTTAGGAAATAAAAAATGCA+AGG | + | chr1.1:79238343-79238362 | None:intergenic | 20.0% |
| !! | TTTATGAACTCTTAGAATTT+GGG | + | chr1.1:79238516-79238535 | None:intergenic | 20.0% |
| !!! | AATGATACTATTCTCATTTT+GGG | - | chr1.1:79236832-79236851 | MS.gene76224:intron | 20.0% |
| !!! | ATAGTGTTGTTTGTTTATTT+TGG | - | chr1.1:79238724-79238743 | MS.gene76224:intron | 20.0% |
| !!! | ATGAAAGCATTAAAAGATTT+GGG | - | chr1.1:79237256-79237275 | MS.gene76224:CDS | 20.0% |
| !!! | ATTAATTGTGTTGATTTTGA+TGG | - | chr1.1:79235590-79235609 | MS.gene76224:intron | 20.0% |
| !!! | ATTTCACTTCTTTTCATTTT+GGG | - | chr1.1:79236046-79236065 | MS.gene76224:intron | 20.0% |
| !!! | TACATATCATTACTATTTTC+GGG | - | chr1.1:79236080-79236099 | MS.gene76224:intron | 20.0% |
| !!! | TAGTGTTGTTTGTTTATTTT+GGG | - | chr1.1:79238725-79238744 | MS.gene76224:intron | 20.0% |
| !!! | TTCAATTTTTAAGTGGAATA+TGG | + | chr1.1:79238827-79238846 | None:intergenic | 20.0% |
| ! | AAACAGATATAGATACCTTA+TGG | + | chr1.1:79235898-79235917 | None:intergenic | 25.0% |
| ! | AAAGAAGATTAAAGTTCCAA+TGG | + | chr1.1:79235865-79235884 | None:intergenic | 25.0% |
| ! | AAATATTGTACATCAAAGCA+AGG | + | chr1.1:79236330-79236349 | None:intergenic | 25.0% |
| ! | AACAATGCTAACAAAAATGA+AGG | + | chr1.1:79237374-79237393 | None:intergenic | 25.0% |
| ! | AATAACAAAATCACACTTCA+AGG | + | chr1.1:79236592-79236611 | None:intergenic | 25.0% |
| ! | AATATATAATACTCGTGAGT+AGG | + | chr1.1:79238220-79238239 | None:intergenic | 25.0% |
| ! | ACACTTAGTAATAATATAGG+GGG | + | chr1.1:79236922-79236941 | None:intergenic | 25.0% |
| ! | AGATTATTAAGCTAATCTTG+CGG | - | chr1.1:79238676-79238695 | MS.gene76224:intron | 25.0% |
| ! | AGATTGCAAATATTTGTAAC+TGG | - | chr1.1:79238429-79238448 | MS.gene76224:intron | 25.0% |
| ! | ATACACTAAAGAGATTCAAT+TGG | + | chr1.1:79236563-79236582 | None:intergenic | 25.0% |
| ! | ATCAACAAAATTCGATATGT+CGG | + | chr1.1:79237501-79237520 | None:intergenic | 25.0% |
| ! | ATGCTAGAATTTAAGTAGTT+TGG | + | chr1.1:79238917-79238936 | None:intergenic | 25.0% |
| ! | CACATGAAATTAACAAAATG+AGG | + | chr1.1:79237128-79237147 | None:intergenic | 25.0% |
| ! | CACTAATTGTTAGTAACTAA+AGG | + | chr1.1:79238579-79238598 | None:intergenic | 25.0% |
| ! | CATTATTATCACTTTATTGC+AGG | - | chr1.1:79236023-79236042 | MS.gene76224:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | + | chr1.1:79235642-79235661 | None:intergenic | 25.0% |
| ! | CTGCAATAAAGTGATAATAA+TGG | + | chr1.1:79236025-79236044 | None:intergenic | 25.0% |
| ! | CTTTAGTTACTAACAATTAG+TGG | - | chr1.1:79238577-79238596 | MS.gene76224:intron | 25.0% |
| ! | GATAAATTTCATGTCAGTTA+TGG | - | chr1.1:79240055-79240074 | MS.gene76224:intron | 25.0% |
| ! | GTTATGCAACTAAAATAAAG+TGG | + | chr1.1:79238555-79238574 | None:intergenic | 25.0% |
| ! | GTTCTTTCAATAATAATGTC+CGG | + | chr1.1:79239257-79239276 | None:intergenic | 25.0% |
| ! | TAAATAATAGCCGTTGTTTA+AGG | - | chr1.1:79235542-79235561 | MS.gene76224:intron | 25.0% |
| ! | TAAATAGTATTCAAGCACTT+GGG | - | chr1.1:79238854-79238873 | MS.gene76224:intron | 25.0% |
| ! | TACTATTGAAGATTAACTGA+TGG | - | chr1.1:79239098-79239117 | MS.gene76224:CDS | 25.0% |
| ! | TATTGAAAGAACTAAAGGTT+GGG | - | chr1.1:79239265-79239284 | MS.gene76224:intron | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | + | chr1.1:79235643-79235662 | None:intergenic | 25.0% |
| ! | TGAAAATTACGAGTCTTTAT+GGG | - | chr1.1:79237146-79237165 | MS.gene76224:intron | 25.0% |
| ! | TTATTGAAAGAACTAAAGGT+TGG | - | chr1.1:79239264-79239283 | MS.gene76224:intron | 25.0% |
| ! | TTGAAAAGCAATTTAGATGT+TGG | - | chr1.1:79240121-79240140 | MS.gene76224:intron | 25.0% |
| ! | TTTGTTCTTGTATTTCTTGT+TGG | - | chr1.1:79237740-79237759 | MS.gene76224:intron | 25.0% |
| !! | ATATTCAAGTTAAGGAAGAT+GGG | - | chr1.1:79239626-79239645 | MS.gene76224:intron | 25.0% |
| !! | CAATGATACTATTCTCATTT+TGG | - | chr1.1:79236831-79236850 | MS.gene76224:intron | 25.0% |
| !! | GATTTCACTTCTTTTCATTT+TGG | - | chr1.1:79236045-79236064 | MS.gene76224:intron | 25.0% |
| !!! | AAAAATTTTGTTTGCTTCAC+TGG | + | chr1.1:79237319-79237338 | None:intergenic | 25.0% |
| !!! | AATTTTTAAGTGGAATATGG+CGG | + | chr1.1:79238824-79238843 | None:intergenic | 25.0% |
| !!! | CTCAAAATAATTGTCACTTT+AGG | + | chr1.1:79235739-79235758 | None:intergenic | 25.0% |
| !!! | GATGAAAGCATTAAAAGATT+TGG | - | chr1.1:79237255-79237274 | MS.gene76224:CDS | 25.0% |
| !!! | TAAATTGCTTTTCAACACAA+TGG | + | chr1.1:79240116-79240135 | None:intergenic | 25.0% |
| !!! | TCATTGTCTACTATTTTTCA+TGG | - | chr1.1:79237901-79237920 | MS.gene76224:intron | 25.0% |
| AAATAGTATTCAAGCACTTG+GGG | - | chr1.1:79238855-79238874 | MS.gene76224:intron | 30.0% | |
| AAATTTCATGTCAGTTATGG+TGG | - | chr1.1:79240058-79240077 | MS.gene76224:intron | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | - | chr1.1:79235776-79235795 | MS.gene76224:intron | 30.0% | |
| AAGTTAGCAAGAATGAGTAA+CGG | + | chr1.1:79235451-79235470 | None:intergenic | 30.0% | |
| AATCAATCATAAGTGGGAAA+AGG | + | chr1.1:79237532-79237551 | None:intergenic | 30.0% | |
| AATTCCCACAACAAGTTATA+TGG | + | chr1.1:79238941-79238960 | None:intergenic | 30.0% | |
| AATTTCATGTCAGTTATGGT+GGG | - | chr1.1:79240059-79240078 | MS.gene76224:intron | 30.0% | |
| ACTTAGTAATAATATAGGGG+GGG | + | chr1.1:79236920-79236939 | None:intergenic | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | - | chr1.1:79235562-79235581 | MS.gene76224:intron | 30.0% | |
| ATAACAAAGAGCTTAACCTT+AGG | + | chr1.1:79236967-79236986 | None:intergenic | 30.0% | |
| ATAGACGTTGTTGCAAAATT+TGG | - | chr1.1:79237644-79237663 | MS.gene76224:intron | 30.0% | |
| ATTAAACAGATCAATGTCTC+AGG | - | chr1.1:79240087-79240106 | MS.gene76224:intron | 30.0% | |
| ATTCCCACAACAAGTTATAT+GGG | + | chr1.1:79238940-79238959 | None:intergenic | 30.0% | |
| CACTTAGTAATAATATAGGG+GGG | + | chr1.1:79236921-79236940 | None:intergenic | 30.0% | |
| CCACTTAAAAATTGAACATC+TGG | - | chr1.1:79238831-79238850 | MS.gene76224:intron | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | - | chr1.1:79235639-79235658 | MS.gene76224:CDS | 30.0% | |
| CCTTAAAAGAAAGCTATCAA+GGG | - | chr1.1:79238885-79238904 | MS.gene76224:intron | 30.0% | |
| CTTAAAAGAAAGCTATCAAG+GGG | - | chr1.1:79238886-79238905 | MS.gene76224:intron | 30.0% | |
| GTAAATAGTATTCAAGCACT+TGG | - | chr1.1:79238853-79238872 | MS.gene76224:intron | 30.0% | |
| GTAAATCTGATCAGTAATAG+TGG | + | chr1.1:79235510-79235529 | None:intergenic | 30.0% | |
| GTGAAAATTACGAGTCTTTA+TGG | - | chr1.1:79237145-79237164 | MS.gene76224:intron | 30.0% | |
| TAACAAAATGAGGAGAAATG+AGG | + | chr1.1:79237118-79237137 | None:intergenic | 30.0% | |
| TAATTCTTACTGCAGATATC+TGG | - | chr1.1:79236368-79236387 | MS.gene76224:intron | 30.0% | |
| TATGTTAATTGACGGTACAT+AGG | - | chr1.1:79236727-79236746 | MS.gene76224:intron | 30.0% | |
| TATTTACACAGCATACATAC+AGG | + | chr1.1:79238064-79238083 | None:intergenic | 30.0% | |
| TCCTGCACAAAATTTCAATT+AGG | + | chr1.1:79235929-79235948 | None:intergenic | 30.0% | |
| TCTTGATCTATCAGTAGTAT+TGG | + | chr1.1:79236419-79236438 | None:intergenic | 30.0% | |
| TGTTCCAAGTCGTTATAAAA+GGG | - | chr1.1:79236751-79236770 | MS.gene76224:intron | 30.0% | |
| TTAACAAAAGCTCAGATTCT+TGG | + | chr1.1:79236265-79236284 | None:intergenic | 30.0% | |
| TTACTAAGTGTATTATCCCA+AGG | - | chr1.1:79236931-79236950 | MS.gene76224:intron | 30.0% | |
| TTAGCATTGTTTACTCTTGA+TGG | - | chr1.1:79237383-79237402 | MS.gene76224:intron | 30.0% | |
| ! | ACAAAGGTATATGTGTCAAT+TGG | - | chr1.1:79237600-79237619 | MS.gene76224:intron | 30.0% |
| ! | AGAAAACTTTTCCTGTTTTG+TGG | - | chr1.1:79237424-79237443 | MS.gene76224:intron | 30.0% |
| ! | AGCATTAAAAGATTTGGGAT+TGG | - | chr1.1:79237261-79237280 | MS.gene76224:CDS | 30.0% |
| ! | CATATTCAAGTTAAGGAAGA+TGG | - | chr1.1:79239625-79239644 | MS.gene76224:intron | 30.0% |
| ! | CTGCAATAGATTGTTGATAA+TGG | + | chr1.1:79238035-79238054 | None:intergenic | 30.0% |
| ! | GGTAAAGTTACTTTGAGTAA+TGG | + | chr1.1:79240000-79240019 | None:intergenic | 30.0% |
| ! | GTATATATGATGGAAGTATG+AGG | - | chr1.1:79239123-79239142 | MS.gene76224:CDS | 30.0% |
| ! | TCCTAATTGAAATTTTGTGC+AGG | - | chr1.1:79235925-79235944 | MS.gene76224:CDS | 30.0% |
| ! | TGCAACTCATATTCAAGTTA+AGG | - | chr1.1:79239618-79239637 | MS.gene76224:intron | 30.0% |
| !! | ATATAACTTGTTGTGGGAAT+TGG | - | chr1.1:79238940-79238959 | MS.gene76224:intron | 30.0% |
| !! | CCAGATGTTCAATTTTTAAG+TGG | + | chr1.1:79238834-79238853 | None:intergenic | 30.0% |
| !! | CCTTGATAGCTTTCTTTTAA+GGG | + | chr1.1:79238887-79238906 | None:intergenic | 30.0% |
| !! | TACTAACAATTAGTGGACTT+AGG | - | chr1.1:79238584-79238603 | MS.gene76224:intron | 30.0% |
| !! | TTTCTGTGTTTTATTATCGC+CGG | - | chr1.1:79239235-79239254 | MS.gene76224:intron | 30.0% |
| AAAACCAGAGGGTGAATATA+AGG | + | chr1.1:79236293-79236312 | None:intergenic | 35.0% | |
| AAATTGCAGCATGCAATATC+TGG | + | chr1.1:79239535-79239554 | None:intergenic | 35.0% | |
| AACTGTGGTGTAAAGCAATA+TGG | + | chr1.1:79236114-79236133 | None:intergenic | 35.0% | |
| AAGCATAAAGAATGCTAGAG+TGG | + | chr1.1:79239216-79239235 | None:intergenic | 35.0% | |
| AAGTCGCAATCAATCATAAG+TGG | + | chr1.1:79237539-79237558 | None:intergenic | 35.0% | |
| AATTACAAGGAAGCTTCTCA+TGG | + | chr1.1:79238118-79238137 | None:intergenic | 35.0% | |
| ACAATTGTGCAACTTAGCTT+TGG | - | chr1.1:79236455-79236474 | MS.gene76224:intron | 35.0% | |
| ACCAATTAATTCGTGTGAGA+CGG | - | chr1.1:79235806-79235825 | MS.gene76224:intron | 35.0% | |
| ACCAGTCTAAAAAAACCAGA+GGG | + | chr1.1:79236304-79236323 | None:intergenic | 35.0% | |
| ACTGATGGCTGTATATATGA+TGG | - | chr1.1:79239113-79239132 | MS.gene76224:CDS | 35.0% | |
| AGTCGCAATCAATCATAAGT+GGG | + | chr1.1:79237538-79237557 | None:intergenic | 35.0% | |
| AGTTAGCAAGAATGAGTAAC+GGG | + | chr1.1:79235450-79235469 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | - | chr1.1:79235653-79235672 | MS.gene76224:CDS | 35.0% | |
| ATAAAAATGCTAGCGATGCT+GGG | - | chr1.1:79238645-79238664 | MS.gene76224:intron | 35.0% | |
| ATAGCATGTCGAACATATGA+AGG | - | chr1.1:79237857-79237876 | MS.gene76224:intron | 35.0% | |
| ATGAATAACCAGCTGAATGT+CGG | + | chr1.1:79235408-79235427 | None:intergenic | 35.0% | |
| ATGCAAGGAAATACTAGAAG+AGG | + | chr1.1:79238328-79238347 | None:intergenic | 35.0% | |
| ATGCCTCTTTCTATTTGAAG+AGG | - | chr1.1:79239036-79239055 | MS.gene76224:intron | 35.0% | |
| ATTATTTCAACTAGCAACCC+TGG | + | chr1.1:79239875-79239894 | None:intergenic | 35.0% | |
| ATTTCATGTCAGTTATGGTG+GGG | - | chr1.1:79240060-79240079 | MS.gene76224:intron | 35.0% | |
| CAAACACCTATCGCATATTT+GGG | + | chr1.1:79239785-79239804 | None:intergenic | 35.0% | |
| CAACGGCTATTATTTAGAGA+TGG | + | chr1.1:79235538-79235557 | None:intergenic | 35.0% | |
| CCCTTAAAAGAAAGCTATCA+AGG | - | chr1.1:79238884-79238903 | MS.gene76224:intron | 35.0% | |
| CCTTACAAATCAGTTTCATG+AGG | - | chr1.1:79238475-79238494 | MS.gene76224:intron | 35.0% | |
| CGTGCATAAACCTTAAACAA+CGG | + | chr1.1:79235555-79235574 | None:intergenic | 35.0% | |
| CTGTTCCAAGTCGTTATAAA+AGG | - | chr1.1:79236750-79236769 | MS.gene76224:intron | 35.0% | |
| GATATATTGTCAGAGACACT+GGG | - | chr1.1:79237966-79237985 | MS.gene76224:intron | 35.0% | |
| GGCTATTATTTAGAGATGGA+GGG | + | chr1.1:79235534-79235553 | None:intergenic | 35.0% | |
| GTTACTCATTCTTGCTAACT+TGG | - | chr1.1:79235450-79235469 | MS.gene76224:CDS | 35.0% | |
| GTTCCAAGTCGTTATAAAAG+GGG | - | chr1.1:79236752-79236771 | MS.gene76224:intron | 35.0% | |
| GTTTGATCATCCTTTATCAG+AGG | - | chr1.1:79240143-79240162 | MS.gene76224:intron | 35.0% | |
| TACCAGTCTAAAAAAACCAG+AGG | + | chr1.1:79236305-79236324 | None:intergenic | 35.0% | |
| TATTCCTTATATTCACCCTC+TGG | - | chr1.1:79236286-79236305 | MS.gene76224:intron | 35.0% | |
| TCAAACACCTATCGCATATT+TGG | + | chr1.1:79239786-79239805 | None:intergenic | 35.0% | |
| TCTTTAGTAGAGTCACCATA+AGG | - | chr1.1:79235880-79235899 | MS.gene76224:intron | 35.0% | |
| TGAACTCTTAGAATTTGGGT+TGG | + | chr1.1:79238512-79238531 | None:intergenic | 35.0% | |
| TGACTTGAATGCAGTAGATT+CGG | - | chr1.1:79235971-79235990 | MS.gene76224:intron | 35.0% | |
| TGATATATTGTCAGAGACAC+TGG | - | chr1.1:79237965-79237984 | MS.gene76224:intron | 35.0% | |
| TGTGAACATTGATGTTGAGT+CGG | - | chr1.1:79239910-79239929 | MS.gene76224:intron | 35.0% | |
| TTGGGATTGGATGTTTCAAA+GGG | - | chr1.1:79237274-79237293 | MS.gene76224:CDS | 35.0% | |
| ! | CAACGTCTATGATTTGTAAG+TGG | + | chr1.1:79237634-79237653 | None:intergenic | 35.0% |
| ! | CATTGTTTACTCTTGATGGT+TGG | - | chr1.1:79237387-79237406 | MS.gene76224:intron | 35.0% |
| ! | GGACTATTTACCTTCTTTTC+TGG | + | chr1.1:79238307-79238326 | None:intergenic | 35.0% |
| ! | GTGGCCAATTTAGTACTTTT+GGG | - | chr1.1:79238793-79238812 | MS.gene76224:intron | 35.0% |
| ! | TGTGGCCAATTTAGTACTTT+TGG | - | chr1.1:79238792-79238811 | MS.gene76224:intron | 35.0% |
| ! | TTTGGGATTGGATGTTTCAA+AGG | - | chr1.1:79237273-79237292 | MS.gene76224:CDS | 35.0% |
| !! | AGGTCCCAAAAGTACTAAAT+TGG | + | chr1.1:79238800-79238819 | None:intergenic | 35.0% |
| !! | CATCCCATATAACTTGTTGT+GGG | - | chr1.1:79238934-79238953 | MS.gene76224:intron | 35.0% |
| !! | CCCTTGATAGCTTTCTTTTA+AGG | + | chr1.1:79238888-79238907 | None:intergenic | 35.0% |
| !! | CCTCATGAAACTGATTTGTA+AGG | + | chr1.1:79238478-79238497 | None:intergenic | 35.0% |
| !! | GATAGCTTTCTTTTAAGGGA+GGG | + | chr1.1:79238883-79238902 | None:intergenic | 35.0% |
| !! | TCTATCAGTAGTATTGGCAT+TGG | + | chr1.1:79236413-79236432 | None:intergenic | 35.0% |
| !! | TGATAGCTTTCTTTTAAGGG+AGG | + | chr1.1:79238884-79238903 | None:intergenic | 35.0% |
| AACTGAAAGTCAGAGACAGA+CGG | + | chr1.1:79239976-79239995 | None:intergenic | 40.0% | |
| AATTAATTCGTGTGAGACGG+AGG | - | chr1.1:79235809-79235828 | MS.gene76224:intron | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | - | chr1.1:79235779-79235798 | MS.gene76224:intron | 40.0% | |
| ATAGATGCAAACCTCCTCTT+GGG | + | chr1.1:79239652-79239671 | None:intergenic | 40.0% | |
| ATCTCTTTATGAAGGTCCGA+AGG | - | chr1.1:79236993-79237012 | MS.gene76224:intron | 40.0% | |
| ATTAATTCGTGTGAGACGGA+GGG | - | chr1.1:79235810-79235829 | MS.gene76224:intron | 40.0% | |
| CAATGGTGTTCACAAACAAC+TGG | + | chr1.1:79235848-79235867 | None:intergenic | 40.0% | |
| CAGTTGTTTGTGAACACCAT+TGG | - | chr1.1:79235846-79235865 | MS.gene76224:intron | 40.0% | |
| CATAAAAATGCTAGCGATGC+TGG | - | chr1.1:79238644-79238663 | MS.gene76224:intron | 40.0% | |
| CATAAAGGCTCCAGAAAAGA+AGG | - | chr1.1:79238294-79238313 | MS.gene76224:intron | 40.0% | |
| CCACCTCTTCAAATAGAAAG+AGG | + | chr1.1:79239042-79239061 | None:intergenic | 40.0% | |
| CCTCTTTCTATTTGAAGAGG+TGG | - | chr1.1:79239039-79239058 | MS.gene76224:intron | 40.0% | |
| CCTGTAATGTATGAGGTTGA+CGG | + | chr1.1:79238988-79239007 | None:intergenic | 40.0% | |
| CGAATGCTCTCTAACATATC+AGG | + | chr1.1:79238007-79238026 | None:intergenic | 40.0% | |
| CGGCTATTATTTAGAGATGG+AGG | + | chr1.1:79235535-79235554 | None:intergenic | 40.0% | |
| CTGTAATGTATGAGGTTGAC+GGG | + | chr1.1:79238987-79239006 | None:intergenic | 40.0% | |
| CTTAGGACAAGATCATCCTT+GGG | + | chr1.1:79236950-79236969 | None:intergenic | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | - | chr1.1:79235780-79235799 | MS.gene76224:intron | 40.0% | |
| GCTGCATCGGAAAAAGATTT+AGG | - | chr1.1:79239061-79239080 | MS.gene76224:CDS | 40.0% | |
| GGGGAAAACTACTTACAACT+AGG | + | chr1.1:79236901-79236920 | None:intergenic | 40.0% | |
| GTTAGCAAGAATGAGTAACG+GGG | + | chr1.1:79235449-79235468 | None:intergenic | 40.0% | |
| TAGTTAGAGAGGGTTAGAGT+AGG | - | chr1.1:79238607-79238626 | MS.gene76224:intron | 40.0% | |
| TATAAAAGGGGCCTGTGTTT+AGG | - | chr1.1:79236764-79236783 | MS.gene76224:intron | 40.0% | |
| TATGCTTTACTTGGCTGTCT+AGG | - | chr1.1:79237173-79237192 | MS.gene76224:intron | 40.0% | |
| TCAGTCTCCTGTAATGTATG+AGG | + | chr1.1:79238995-79239014 | None:intergenic | 40.0% | |
| TCCGTCTCACACGAATTAAT+TGG | + | chr1.1:79235810-79235829 | None:intergenic | 40.0% | |
| TGGACTTAGGTAGTTAGAGA+GGG | - | chr1.1:79238597-79238616 | MS.gene76224:intron | 40.0% | |
| TGTAATGTATGAGGTTGACG+GGG | + | chr1.1:79238986-79239005 | None:intergenic | 40.0% | |
| TTGCAACCCAAATATGCGAT+AGG | - | chr1.1:79239776-79239795 | MS.gene76224:intron | 40.0% | |
| TTGGGCTGCTTAATTGATAC+TGG | - | chr1.1:79239283-79239302 | MS.gene76224:intron | 40.0% | |
| ! | AGGCTTGTTCGTTAAGTAGA+TGG | + | chr1.1:79237098-79237117 | None:intergenic | 40.0% |
| ! | TAAAGTGGTGATGACTGACA+AGG | + | chr1.1:79238540-79238559 | None:intergenic | 40.0% |
| ! | TTTGTGCTGGTGTAAGATAG+TGG | - | chr1.1:79236214-79236233 | MS.gene76224:intron | 40.0% |
| !! | GCATCCCATATAACTTGTTG+TGG | - | chr1.1:79238933-79238952 | MS.gene76224:intron | 40.0% |
| !! | TTTTAGGTAGACCTCTGCTT+CGG | - | chr1.1:79238381-79238400 | MS.gene76224:intron | 40.0% |
| !!! | ACCCTCTGGTTTTTTTAGAC+TGG | - | chr1.1:79236300-79236319 | MS.gene76224:intron | 40.0% |
| AAGAAAAAACCCCGAAGCAG+AGG | + | chr1.1:79238395-79238414 | None:intergenic | 45.0% | |
| ACAACTAGGTGACTGTCATG+TGG | + | chr1.1:79236887-79236906 | None:intergenic | 45.0% | |
| AGAGGAGGTTTGCATCTATG+TGG | - | chr1.1:79239653-79239672 | MS.gene76224:intron | 45.0% | |
| ATGGGCCTCTATGCTTTACT+TGG | - | chr1.1:79237164-79237183 | MS.gene76224:intron | 45.0% | |
| ATTTGAAGAGGTGGCTGCAT+CGG | - | chr1.1:79239048-79239067 | MS.gene76224:intron | 45.0% | |
| CATAGATGCAAACCTCCTCT+TGG | + | chr1.1:79239653-79239672 | None:intergenic | 45.0% | |
| CCAAGGATGATCTTGTCCTA+AGG | - | chr1.1:79236948-79236967 | MS.gene76224:intron | 45.0% | |
| CCGTCAACCTCATACATTAC+AGG | - | chr1.1:79238985-79239004 | MS.gene76224:intron | 45.0% | |
| CCTGCAGAGCGAAAAAAAGT+GGG | + | chr1.1:79240021-79240040 | None:intergenic | 45.0% | |
| CCTTAGGACAAGATCATCCT+TGG | + | chr1.1:79236951-79236970 | None:intergenic | 45.0% | |
| GACACGGTGATGTGGTTATT+GGG | - | chr1.1:79236500-79236519 | MS.gene76224:intron | 45.0% | |
| GACAGCCAAGTAAAGCATAG+AGG | + | chr1.1:79237172-79237191 | None:intergenic | 45.0% | |
| GTCTCCAATCCTAGAAAACC+TGG | - | chr1.1:79235474-79235493 | MS.gene76224:CDS | 45.0% | |
| GTGGACTTAGGTAGTTAGAG+AGG | - | chr1.1:79238596-79238615 | MS.gene76224:intron | 45.0% | |
| TATGCCAAACACTTCACCCA+GGG | + | chr1.1:79238278-79238297 | None:intergenic | 45.0% | |
| TCTGCAGGGTTTGATTGCTA+AGG | - | chr1.1:79240033-79240052 | MS.gene76224:intron | 45.0% | |
| TCTTGGAGCTCTTCTTGACA+CGG | - | chr1.1:79236484-79236503 | MS.gene76224:intron | 45.0% | |
| TGACACGGTGATGTGGTTAT+TGG | - | chr1.1:79236499-79236518 | MS.gene76224:intron | 45.0% | |
| TGTACATCGAGACAGCAGAT+AGG | - | chr1.1:79239849-79239868 | MS.gene76224:intron | 45.0% | |
| TTATGCCAAACACTTCACCC+AGG | + | chr1.1:79238279-79238298 | None:intergenic | 45.0% | |
| TTTAAGTGGAATATGGCGGC+AGG | + | chr1.1:79238820-79238839 | None:intergenic | 45.0% | |
| TTTAGGTAGACCTCTGCTTC+GGG | - | chr1.1:79238382-79238401 | MS.gene76224:intron | 45.0% | |
| ! | AGGCCCCTTTTATAACGACT+TGG | + | chr1.1:79236758-79236777 | None:intergenic | 45.0% |
| ! | GGGTGAAGTGTTTGGCATAA+AGG | - | chr1.1:79238279-79238298 | MS.gene76224:CDS | 45.0% |
| !! | CTTAGCTTTGGTGATCGTCT+TGG | - | chr1.1:79236467-79236486 | MS.gene76224:intron | 45.0% |
| !!! | CCACTTTTTTTCGCTCTGCA+GGG | - | chr1.1:79240019-79240038 | MS.gene76224:intron | 45.0% |
| !!! | TGAGCCAGGTTTTCTAGGAT+TGG | + | chr1.1:79235481-79235500 | None:intergenic | 45.0% |
| !! | ATTAACAATAAAAAATAAAA+CGG | + | chr1.1:79239161-79239180 | None:intergenic | 5.0% |
| !!! | TTTTATTGTTAATATTTAAA+TGG | - | chr1.1:79239168-79239187 | MS.gene76224:intron | 5.0% |
| AAAGGGAACTGTCTCCACTG+AGG | - | chr1.1:79237291-79237310 | MS.gene76224:intron | 50.0% | |
| AAGGGAACTGTCTCCACTGA+GGG | - | chr1.1:79237292-79237311 | MS.gene76224:intron | 50.0% | |
| ACGGGGACTTGGGTATTATG+GGG | + | chr1.1:79238969-79238988 | None:intergenic | 50.0% | |
| CCCTGCAGAGCGAAAAAAAG+TGG | + | chr1.1:79240022-79240041 | None:intergenic | 50.0% | |
| CTAGTTGTTCACTGGACTCC+TGG | + | chr1.1:79238255-79238274 | None:intergenic | 50.0% | |
| CTCACGCTACACCACAAAAC+AGG | + | chr1.1:79237438-79237457 | None:intergenic | 50.0% | |
| CTCTTCTTGACACGGTGATG+TGG | - | chr1.1:79236492-79236511 | MS.gene76224:intron | 50.0% | |
| GACGGGGACTTGGGTATTAT+GGG | + | chr1.1:79238970-79238989 | None:intergenic | 50.0% | |
| GGTGACTGTCATGTGGATGT+CGG | + | chr1.1:79236880-79236899 | None:intergenic | 50.0% | |
| GTCTGTGTCTGAGTTTGTGC+TGG | - | chr1.1:79236201-79236220 | MS.gene76224:intron | 50.0% | |
| GTGACTGTCATGTGGATGTC+GGG | + | chr1.1:79236879-79236898 | None:intergenic | 50.0% | |
| TATGAGGTTGACGGGGACTT+GGG | + | chr1.1:79238979-79238998 | None:intergenic | 50.0% | |
| TCCAGTGAACAACTAGCCCT+GGG | - | chr1.1:79238259-79238278 | MS.gene76224:CDS | 50.0% | |
| TGACGGGGACTTGGGTATTA+TGG | + | chr1.1:79238971-79238990 | None:intergenic | 50.0% | |
| TGCAGTAGATTCGGCTTCAC+TGG | - | chr1.1:79235980-79235999 | MS.gene76224:intron | 50.0% | |
| TTAAGGAAGATGGGCCCAAG+AGG | - | chr1.1:79239635-79239654 | MS.gene76224:intron | 50.0% | |
| TTAGGTAGACCTCTGCTTCG+GGG | - | chr1.1:79238383-79238402 | MS.gene76224:intron | 50.0% | |
| !!! | CCCACTTTTTTTCGCTCTGC+AGG | - | chr1.1:79240018-79240037 | MS.gene76224:intron | 50.0% |
| AGTCAGAGACAGACGGAAGC+AGG | + | chr1.1:79239969-79239988 | None:intergenic | 55.0% | |
| ATCGAGACAGCAGATAGGCC+AGG | - | chr1.1:79239854-79239873 | MS.gene76224:intron | 55.0% | |
| CAGGCTATCCGACATTCAGC+TGG | - | chr1.1:79235397-79235416 | MS.gene76224:CDS | 55.0% | |
| GCACACAAGCTACGCATGTG+TGG | + | chr1.1:79236141-79236160 | None:intergenic | 55.0% | |
| GCTGTCGACAGCCTAAACAC+AGG | + | chr1.1:79236778-79236797 | None:intergenic | 55.0% | |
| GTATGAGGTTGACGGGGACT+TGG | + | chr1.1:79238980-79238999 | None:intergenic | 55.0% | |
| GTCCAGTGAACAACTAGCCC+TGG | - | chr1.1:79238258-79238277 | MS.gene76224:CDS | 55.0% | |
| GTCGGCTGAGATCGATACAG+AGG | - | chr1.1:79239928-79239947 | MS.gene76224:intron | 55.0% | |
| TCGAGACAGCAGATAGGCCA+GGG | - | chr1.1:79239855-79239874 | MS.gene76224:intron | 55.0% | |
| TTGCTTCACTGGTCCCTCAG+TGG | + | chr1.1:79237308-79237327 | None:intergenic | 55.0% | |
| ! | CGCATGTGTGGTGTCAACTG+TGG | + | chr1.1:79236129-79236148 | None:intergenic | 55.0% |
| ! | CTAGCCCTGGGTGAAGTGTT+TGG | - | chr1.1:79238271-79238290 | MS.gene76224:CDS | 55.0% |
| ! | TGCGCTGAGCCAGGTTTTCT+AGG | + | chr1.1:79235486-79235505 | None:intergenic | 55.0% |
| !! | ACCCAGGGCTAGTTGTTCAC+TGG | + | chr1.1:79238263-79238282 | None:intergenic | 55.0% |
| AATAGTGGCTGCGCTGAGCC+AGG | + | chr1.1:79235495-79235514 | None:intergenic | 60.0% | |
| AGGAAGATGGGCCCAAGAGG+AGG | - | chr1.1:79239638-79239657 | MS.gene76224:intron | 60.0% | |
| CAGACGGAAGCAGGACAGAG+AGG | + | chr1.1:79239960-79239979 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 79235392 | 79240171 | 79235392 | ID=MS.gene76224 |
| chr1.1 | mRNA | 79235392 | 79240171 | 79235392 | ID=MS.gene76224.t1;Parent=MS.gene76224 |
| chr1.1 | exon | 79240145 | 79240171 | 79240145 | ID=MS.gene76224.t1.exon1;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79240145 | 79240171 | 79240145 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79239058 | 79239180 | 79239058 | ID=MS.gene76224.t1.exon2;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79239058 | 79239180 | 79239058 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79238213 | 79238307 | 79238213 | ID=MS.gene76224.t1.exon3;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79238213 | 79238307 | 79238213 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79237500 | 79237584 | 79237500 | ID=MS.gene76224.t1.exon4;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79237500 | 79237584 | 79237500 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79237248 | 79237307 | 79237248 | ID=MS.gene76224.t1.exon5;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79237248 | 79237307 | 79237248 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79235904 | 79235959 | 79235904 | ID=MS.gene76224.t1.exon6;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79235904 | 79235959 | 79235904 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79235614 | 79235719 | 79235614 | ID=MS.gene76224.t1.exon7;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79235614 | 79235719 | 79235614 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| chr1.1 | exon | 79235392 | 79235523 | 79235392 | ID=MS.gene76224.t1.exon8;Parent=MS.gene76224.t1 |
| chr1.1 | CDS | 79235392 | 79235523 | 79235392 | ID=cds.MS.gene76224.t1;Parent=MS.gene76224.t1 |
| Gene Sequence |
| Protein sequence |
