Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76902.t1 | XP_013447443.1 | 92.4 | 301 | 23 | 0 | 1 | 301 | 1 | 301 | 1.30E-132 | 482.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76902.t1 | Q9M886 | 55.8 | 285 | 82 | 4 | 1 | 281 | 1 | 245 | 7.3e-76 | 285.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76902.t1 | A0A072TVI9 | 92.4 | 301 | 23 | 0 | 1 | 301 | 1 | 301 | 9.3e-133 | 482.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene76902.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050426 | MS.gene76902 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene050553 | MS.gene76902 | -0.805178 | 1.51E-49 | -1.69E-46 |
| MS.gene050710 | MS.gene76902 | 0.808268 | 3.37E-50 | -1.69E-46 |
| MS.gene051552 | MS.gene76902 | 0.812297 | 4.55E-51 | -1.69E-46 |
| MS.gene051838 | MS.gene76902 | -0.802717 | 4.91E-49 | -1.69E-46 |
| MS.gene052469 | MS.gene76902 | -0.805 | 1.65E-49 | -1.69E-46 |
| MS.gene055159 | MS.gene76902 | 0.827935 | 1.19E-54 | -1.69E-46 |
| MS.gene055744 | MS.gene76902 | -0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene057356 | MS.gene76902 | 0.802954 | 4.39E-49 | -1.69E-46 |
| MS.gene058418 | MS.gene76902 | 0.800685 | 1.28E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene76902 | -0.82071 | 5.94E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76902.t1 | MTR_7g007010 | 97.010 | 301 | 9 | 0 | 1 | 301 | 1 | 301 | 0.0 | 597 |
| MS.gene76902.t1 | MTR_6g018270 | 59.677 | 310 | 84 | 9 | 1 | 301 | 1 | 278 | 3.60e-112 | 326 |
| MS.gene76902.t1 | MTR_6g453130 | 43.946 | 223 | 115 | 4 | 1 | 213 | 1 | 223 | 2.65e-57 | 184 |
| MS.gene76902.t1 | MTR_4g095600 | 51.479 | 169 | 66 | 2 | 3 | 159 | 1 | 165 | 8.79e-55 | 178 |
| MS.gene76902.t1 | MTR_1g110840 | 45.192 | 208 | 100 | 5 | 1 | 196 | 1 | 206 | 6.71e-53 | 173 |
| MS.gene76902.t1 | MTR_5g015880 | 65.455 | 110 | 38 | 0 | 3 | 112 | 1 | 110 | 2.54e-52 | 171 |
| MS.gene76902.t1 | MTR_6g054150 | 50.575 | 174 | 69 | 6 | 1 | 164 | 1 | 167 | 3.55e-52 | 171 |
| MS.gene76902.t1 | MTR_6g054080 | 50.000 | 174 | 70 | 6 | 1 | 164 | 1 | 167 | 4.71e-51 | 168 |
| MS.gene76902.t1 | MTR_1g106420 | 61.538 | 104 | 40 | 0 | 3 | 106 | 1 | 104 | 4.07e-45 | 152 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76902.t1 | AT3G02550 | 60.000 | 285 | 70 | 4 | 1 | 281 | 1 | 245 | 3.52e-113 | 328 |
| MS.gene76902.t1 | AT1G67100 | 81.560 | 141 | 23 | 2 | 1 | 138 | 1 | 141 | 2.50e-82 | 248 |
| MS.gene76902.t1 | AT1G68510 | 62.353 | 170 | 54 | 2 | 1 | 160 | 1 | 170 | 8.16e-74 | 226 |
| MS.gene76902.t1 | AT3G49940 | 70.909 | 110 | 32 | 0 | 3 | 112 | 1 | 110 | 1.43e-55 | 180 |
| MS.gene76902.t1 | AT5G67420 | 66.364 | 110 | 37 | 0 | 3 | 112 | 1 | 110 | 1.66e-54 | 178 |
| MS.gene76902.t1 | AT5G67420 | 66.364 | 110 | 37 | 0 | 3 | 112 | 1 | 110 | 1.66e-54 | 178 |
| MS.gene76902.t1 | AT4G37540 | 67.568 | 111 | 36 | 0 | 3 | 113 | 1 | 111 | 1.61e-53 | 175 |
Find 99 sgRNAs with CRISPR-Local
Find 111 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCGACTGAACCGTAAAT+TGG | 0.188374 | 7.2:-91305663 | None:intergenic |
| GTGGCATTAGCTTGTGATTC+AGG | 0.204656 | 7.2:-91305238 | None:intergenic |
| GGCTCATGGAATGTGGAGTT+GGG | 0.290152 | 7.2:+91306290 | MS.gene76902:CDS |
| ACCAGCACGACCGTAGAATT+TGG | 0.324902 | 7.2:-91305272 | None:intergenic |
| TGGAGAGGAAAAGGTTGGTT+TGG | 0.330903 | 7.2:+91306178 | MS.gene76902:CDS |
| GTTGGTTTGGAGCTGACTCT+TGG | 0.364251 | 7.2:+91306191 | MS.gene76902:CDS |
| CGAATAGTGAACCCAATTTA+CGG | 0.368957 | 7.2:+91305651 | MS.gene76902:CDS |
| GTCTGAGGCGGTTGCGGTGG+TGG | 0.368975 | 7.2:+91306052 | MS.gene76902:CDS |
| CTCTCACTGGTTCGGTCAAC+CGG | 0.379598 | 7.2:-91306155 | None:intergenic |
| GCAGCTGCTTCCGAAGTTAT+CGG | 0.380995 | 7.2:-91305756 | None:intergenic |
| TTGACATAGCTGCCAACTTC+CGG | 0.388062 | 7.2:-91305694 | None:intergenic |
| CTCTTCTTGTATCTTCGGCT+TGG | 0.390746 | 7.2:-91305907 | None:intergenic |
| CCTCTCCACTCTCACTGGTT+CGG | 0.397640 | 7.2:-91306163 | None:intergenic |
| GGAGTTGGGGCTTCAATATC+CGG | 0.399627 | 7.2:+91306304 | MS.gene76902:CDS |
| GAAAAGAAGGGTTGTATTGA+AGG | 0.400262 | 7.2:+91306256 | MS.gene76902:CDS |
| ACGTGATAAACGCGTGAAAC+CGG | 0.400688 | 7.2:-91306221 | None:intergenic |
| TGGCTCATGGAATGTGGAGT+TGG | 0.402516 | 7.2:+91306289 | MS.gene76902:CDS |
| TTGGTTTGGAGCTGACTCTT+GGG | 0.409856 | 7.2:+91306192 | MS.gene76902:CDS |
| GATCTTATTTAGAGATGAAC+CGG | 0.409879 | 7.2:+91306112 | MS.gene76902:CDS |
| CGGTTCATTACCTCCTCAAC+CGG | 0.413622 | 7.2:-91305996 | None:intergenic |
| CAGTGAGAGTGGAGAGGAAA+AGG | 0.413870 | 7.2:+91306169 | MS.gene76902:CDS |
| GCTGACTCTTGGGCTTGAAC+CGG | 0.417029 | 7.2:+91306202 | MS.gene76902:CDS |
| CCACCAGTCTGAGGCGGTTG+CGG | 0.421397 | 7.2:+91306046 | MS.gene76902:CDS |
| CGACACATGACGGATGTCAT+AGG | 0.427071 | 7.2:-91305805 | None:intergenic |
| ACCGGTCGGCTCAGTTGAAC+CGG | 0.430775 | 7.2:-91305964 | None:intergenic |
| AACCGACTGAACCGTAAATT+GGG | 0.433750 | 7.2:-91305662 | None:intergenic |
| GAGGCGGTTGCGGTGGTGGA+TGG | 0.434659 | 7.2:+91306056 | MS.gene76902:CDS |
| ACGGTTCAGTCGGTTTATTA+TGG | 0.442488 | 7.2:+91305670 | MS.gene76902:CDS |
| GCCGACCGGTTCGGTTGAAC+CGG | 0.442999 | 7.2:+91305977 | MS.gene76902:CDS |
| CGAACCTGGACGAAGATGTT+CGG | 0.443982 | 7.2:-91305320 | None:intergenic |
| TGGCATTAGCTTGTGATTCA+GGG | 0.445704 | 7.2:-91305237 | None:intergenic |
| GAACCTGGACGAAGATGTTC+GGG | 0.446611 | 7.2:-91305319 | None:intergenic |
| GTATTGAAGGATTGTGGTGT+TGG | 0.451012 | 7.2:+91306269 | MS.gene76902:CDS |
| GAGAGTGGAGAGGAAAAGGT+TGG | 0.454972 | 7.2:+91306173 | MS.gene76902:CDS |
| CTTCGGAAGCAGCTGCTAAC+GGG | 0.456571 | 7.2:+91305763 | MS.gene76902:CDS |
| GCCAAATTCTACGGTCGTGC+TGG | 0.457716 | 7.2:+91305271 | MS.gene76902:CDS |
| GAAGCAGCTGCTAACGGGAG+GGG | 0.464479 | 7.2:+91305768 | MS.gene76902:CDS |
| GTGTTTCTCGCCAAATTCTA+CGG | 0.467341 | 7.2:+91305262 | MS.gene76902:CDS |
| TTCAACTGAGCCGACCGGTT+CGG | 0.472535 | 7.2:+91305968 | MS.gene76902:CDS |
| CTCAACCGGTTCAACCGAAC+CGG | 0.476475 | 7.2:-91305982 | None:intergenic |
| GAGAACAAGGGATTTGAATC+CGG | 0.487023 | 7.2:+91305945 | MS.gene76902:CDS |
| ATTTAGAGATGAACCGGAGT+TGG | 0.489333 | 7.2:+91306118 | MS.gene76902:CDS |
| CGGTTCGGTTGAACCGGTTG+AGG | 0.489995 | 7.2:+91305983 | MS.gene76902:CDS |
| GCTTAAGACCTTGTTTGCAA+TGG | 0.491169 | 7.2:+91305206 | MS.gene76902:CDS |
| AAGCCAAACCCGGTCTAAGC+CGG | 0.498806 | 7.2:-91306323 | None:intergenic |
| TGGTTCCTGTGAAGAAAAGA+AGG | 0.501528 | 7.2:+91306243 | MS.gene76902:CDS |
| TCCGAAGTTATCGGCGTGAT+CGG | 0.502268 | 7.2:-91305747 | None:intergenic |
| GTTTATTATGGTCCGGAAGT+TGG | 0.502610 | 7.2:+91305682 | MS.gene76902:CDS |
| ATGTCATAGGCTTTGAGTGG+TGG | 0.508004 | 7.2:-91305792 | None:intergenic |
| GAGATGAACCGGAGTTGGAC+CGG | 0.508299 | 7.2:+91306123 | MS.gene76902:CDS |
| GACTCTTTGTTGAGTTAACT+CGG | 0.513097 | 7.2:-91305853 | None:intergenic |
| CCACCGCAACCGCCTCAGAC+TGG | 0.514674 | 7.2:-91306049 | None:intergenic |
| AGGATTGTGGTGTTGGCTCA+TGG | 0.516288 | 7.2:+91306276 | MS.gene76902:CDS |
| GTTCGGGACCGGCGTTAACA+AGG | 0.520425 | 7.2:-91305303 | None:intergenic |
| CCAGTCTGAGGCGGTTGCGG+TGG | 0.522968 | 7.2:+91306049 | MS.gene76902:CDS |
| AAAGAGTAGTAACGAGAACA+AGG | 0.530460 | 7.2:+91305932 | MS.gene76902:CDS |
| ACTTCGGAAGCAGCTGCTAA+CGG | 0.537457 | 7.2:+91305762 | MS.gene76902:CDS |
| TGTCATAGGCTTTGAGTGGT+GGG | 0.543552 | 7.2:-91305791 | None:intergenic |
| GGTTGTAGAGTACTAAGAAA+AGG | 0.544678 | 7.2:+91305166 | MS.gene76902:CDS |
| GCTCATGGAATGTGGAGTTG+GGG | 0.544869 | 7.2:+91306291 | MS.gene76902:CDS |
| GGTCCCGAACATCTTCGTCC+AGG | 0.558956 | 7.2:+91305316 | MS.gene76902:CDS |
| CGGAAGCAGCTGCTAACGGG+AGG | 0.561761 | 7.2:+91305766 | MS.gene76902:CDS |
| TCAGTCGGTTTATTATGGTC+CGG | 0.563725 | 7.2:+91305675 | MS.gene76902:CDS |
| TGGACGAAGATGTTCGGGAC+CGG | 0.564250 | 7.2:-91305314 | None:intergenic |
| ACCGATCACGCCGATAACTT+CGG | 0.564329 | 7.2:+91305746 | MS.gene76902:CDS |
| AACCCAATTTACGGTTCAGT+CGG | 0.566554 | 7.2:+91305660 | MS.gene76902:CDS |
| TTCGGTTGAACCGGTTGAGG+AGG | 0.569657 | 7.2:+91305986 | MS.gene76902:CDS |
| GTTGACCGAACCAGTGAGAG+TGG | 0.575650 | 7.2:+91306158 | MS.gene76902:CDS |
| CGGTTGAGGAGGTAATGAAC+CGG | 0.580729 | 7.2:+91305997 | MS.gene76902:CDS |
| GGAAGCAGCTGCTAACGGGA+GGG | 0.580906 | 7.2:+91305767 | MS.gene76902:CDS |
| CTCAACAAAGAGTCAAGACT+CGG | 0.582942 | 7.2:+91305862 | MS.gene76902:CDS |
| TGGTGTTGGCTCATGGAATG+TGG | 0.583661 | 7.2:+91306283 | MS.gene76902:CDS |
| TCCGGTTCAACTGAGCCGAC+CGG | 0.592967 | 7.2:+91305963 | MS.gene76902:CDS |
| GGTTTCACGCGTTTATCACG+TGG | 0.593523 | 7.2:+91306223 | MS.gene76902:CDS |
| TGACATCCGTCATGTGTCGA+AGG | 0.595504 | 7.2:+91305809 | MS.gene76902:CDS |
| TTTCCTCCTTCGACACATGA+CGG | 0.600098 | 7.2:-91305815 | None:intergenic |
| TCAAGACTCGGTCGCGTAAG+CGG | 0.609713 | 7.2:+91305874 | MS.gene76902:CDS |
| AGGGTTGTATTGAAGGATTG+TGG | 0.614044 | 7.2:+91306263 | MS.gene76902:CDS |
| TGTGTCGAAGGAGGAAAACT+CGG | 0.616290 | 7.2:+91305821 | MS.gene76902:CDS |
| AAAATGCGGATGAGTTGTAA+CGG | 0.616520 | 7.2:+91305145 | None:intergenic |
| GTCGATTAGCCACCAGTCTG+AGG | 0.618436 | 7.2:+91306037 | MS.gene76902:CDS |
| GTAGAATTTGGCGAGAAACA+CGG | 0.619114 | 7.2:-91305260 | None:intergenic |
| CAAGCCGAAGATACAAGAAG+AGG | 0.623975 | 7.2:+91305908 | MS.gene76902:CDS |
| GTTGGACCGGAAAATGAAGC+CGG | 0.627386 | 7.2:+91306136 | MS.gene76902:CDS |
| CATCCGTCATGTGTCGAAGG+AGG | 0.629554 | 7.2:+91305812 | MS.gene76902:CDS |
| CCGCAACCGCCTCAGACTGG+TGG | 0.630942 | 7.2:-91306046 | None:intergenic |
| ACCGGTTCAACCGAACCGGT+CGG | 0.636400 | 7.2:-91305978 | None:intergenic |
| ACGACTCATGACTAGCTGAC+CGG | 0.638954 | 7.2:-91306016 | None:intergenic |
| GCAGCTATGTCAAGCCGCAG+TGG | 0.645652 | 7.2:+91305704 | MS.gene76902:CDS |
| TTGAGTTAACTCGGTCGACG+CGG | 0.651446 | 7.2:-91305844 | None:intergenic |
| CTCATGAACCTTGTTAACGC+CGG | 0.654635 | 7.2:+91305295 | MS.gene76902:CDS |
| TCGTTGTTGTACGAAGCATG+TGG | 0.660850 | 7.2:+91305627 | MS.gene76902:CDS |
| CCGAACCAGTGAGAGTGGAG+AGG | 0.672740 | 7.2:+91306163 | MS.gene76902:CDS |
| GGTTCCTGTGAAGAAAAGAA+GGG | 0.688577 | 7.2:+91306244 | MS.gene76902:CDS |
| GATTAGCCACCAGTCTGAGG+CGG | 0.698548 | 7.2:+91306040 | MS.gene76902:CDS |
| CGGATGTCATAGGCTTTGAG+TGG | 0.702654 | 7.2:-91305795 | None:intergenic |
| AAGAGTAGTAACGAGAACAA+GGG | 0.713391 | 7.2:+91305933 | MS.gene76902:CDS |
| GAATTTGGCGAGAAACACGG+TGG | 0.783343 | 7.2:-91305257 | None:intergenic |
| TTTCAAAACAGCTTCCACTG+CGG | 0.791709 | 7.2:-91305718 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTCTAAATATAAGAAAATT+TGG | - | chr7.2:91305519-91305538 | None:intergenic | 10.0% |
| !!! | ACAAATATATCAACTTTTGT+TGG | - | chr7.2:91305493-91305512 | None:intergenic | 20.0% |
| ! | ATCTCTCTATAAGAAAAAGT+TGG | + | chr7.2:91305466-91305485 | MS.gene76902:intron | 25.0% |
| GTATTGCATGTTTGGATAAA+CGG | - | chr7.2:91305442-91305461 | None:intergenic | 30.0% | |
| TTAGTGCATGTTTAGATTGA+CGG | + | chr7.2:91305375-91305394 | MS.gene76902:intron | 30.0% | |
| ! | GATCTTATTTAGAGATGAAC+CGG | + | chr7.2:91306112-91306131 | MS.gene76902:CDS | 30.0% |
| ! | TTTTCCTCTTCTTGTATCTT+CGG | - | chr7.2:91305915-91305934 | None:intergenic | 30.0% |
| AAAGAGTAGTAACGAGAACA+AGG | + | chr7.2:91305932-91305951 | MS.gene76902:CDS | 35.0% | |
| AAGAGTAGTAACGAGAACAA+GGG | + | chr7.2:91305933-91305952 | MS.gene76902:CDS | 35.0% | |
| AGATGTGTGTATTGCATGTT+TGG | - | chr7.2:91305450-91305469 | None:intergenic | 35.0% | |
| CGAATAGTGAACCCAATTTA+CGG | + | chr7.2:91305651-91305670 | MS.gene76902:CDS | 35.0% | |
| GAAAAGAAGGGTTGTATTGA+AGG | + | chr7.2:91306256-91306275 | MS.gene76902:CDS | 35.0% | |
| GACTCTTTGTTGAGTTAACT+CGG | - | chr7.2:91305856-91305875 | None:intergenic | 35.0% | |
| ! | CTTTTGATCCATTGCAAACA+AGG | - | chr7.2:91305217-91305236 | None:intergenic | 35.0% |
| ! | GGTTGTAGAGTACTAAGAAA+AGG | + | chr7.2:91305166-91305185 | MS.gene76902:CDS | 35.0% |
| AAACCGACTGAACCGTAAAT+TGG | - | chr7.2:91305666-91305685 | None:intergenic | 40.0% | |
| AACCCAATTTACGGTTCAGT+CGG | + | chr7.2:91305660-91305679 | MS.gene76902:CDS | 40.0% | |
| AACCGACTGAACCGTAAATT+GGG | - | chr7.2:91305665-91305684 | None:intergenic | 40.0% | |
| AGGGTTGTATTGAAGGATTG+TGG | + | chr7.2:91306263-91306282 | MS.gene76902:CDS | 40.0% | |
| ATTTAGAGATGAACCGGAGT+TGG | + | chr7.2:91306118-91306137 | MS.gene76902:CDS | 40.0% | |
| CTCAACAAAGAGTCAAGACT+CGG | + | chr7.2:91305862-91305881 | MS.gene76902:CDS | 40.0% | |
| GAGAACAAGGGATTTGAATC+CGG | + | chr7.2:91305945-91305964 | MS.gene76902:CDS | 40.0% | |
| GGTTCCTGTGAAGAAAAGAA+GGG | + | chr7.2:91306244-91306263 | MS.gene76902:CDS | 40.0% | |
| GTAGAATTTGGCGAGAAACA+CGG | - | chr7.2:91305263-91305282 | None:intergenic | 40.0% | |
| GTATTGAAGGATTGTGGTGT+TGG | + | chr7.2:91306269-91306288 | MS.gene76902:CDS | 40.0% | |
| GTGTTTCTCGCCAAATTCTA+CGG | + | chr7.2:91305262-91305281 | MS.gene76902:CDS | 40.0% | |
| GTTTATTATGGTCCGGAAGT+TGG | + | chr7.2:91305682-91305701 | MS.gene76902:CDS | 40.0% | |
| TGGTTCCTGTGAAGAAAAGA+AGG | + | chr7.2:91306243-91306262 | MS.gene76902:CDS | 40.0% | |
| TTTCAAAACAGCTTCCACTG+CGG | - | chr7.2:91305721-91305740 | None:intergenic | 40.0% | |
| ! | ACAACCCTTCTTTTCTTCAC+AGG | - | chr7.2:91306251-91306270 | None:intergenic | 40.0% |
| ! | ACGGTTCAGTCGGTTTATTA+TGG | + | chr7.2:91305670-91305689 | MS.gene76902:CDS | 40.0% |
| ! | GCTTAAGACCTTGTTTGCAA+TGG | + | chr7.2:91305206-91305225 | MS.gene76902:CDS | 40.0% |
| ! | TCAGTCGGTTTATTATGGTC+CGG | + | chr7.2:91305675-91305694 | MS.gene76902:CDS | 40.0% |
| !! | TGGCATTAGCTTGTGATTCA+GGG | - | chr7.2:91305240-91305259 | None:intergenic | 40.0% |
| !!! | AGTGTCACTTTTTACGAACC+TGG | - | chr7.2:91305337-91305356 | None:intergenic | 40.0% |
| ACGTGATAAACGCGTGAAAC+CGG | - | chr7.2:91306224-91306243 | None:intergenic | 45.0% | |
| CAAGCCGAAGATACAAGAAG+AGG | + | chr7.2:91305908-91305927 | MS.gene76902:CDS | 45.0% | |
| CTCATGAACCTTGTTAACGC+CGG | + | chr7.2:91305295-91305314 | MS.gene76902:CDS | 45.0% | |
| CTCTTCTTGTATCTTCGGCT+TGG | - | chr7.2:91305910-91305929 | None:intergenic | 45.0% | |
| TCGTTGTTGTACGAAGCATG+TGG | + | chr7.2:91305627-91305646 | MS.gene76902:CDS | 45.0% | |
| TGTGTCGAAGGAGGAAAACT+CGG | + | chr7.2:91305821-91305840 | MS.gene76902:CDS | 45.0% | |
| TTGACATAGCTGCCAACTTC+CGG | - | chr7.2:91305697-91305716 | None:intergenic | 45.0% | |
| TTTCCTCCTTCGACACATGA+CGG | - | chr7.2:91305818-91305837 | None:intergenic | 45.0% | |
| ! | TGGAGAGGAAAAGGTTGGTT+TGG | + | chr7.2:91306178-91306197 | MS.gene76902:CDS | 45.0% |
| ! | TTCATTTTCCGGTCCAACTC+CGG | - | chr7.2:91306134-91306153 | None:intergenic | 45.0% |
| !! | ATGTCATAGGCTTTGAGTGG+TGG | - | chr7.2:91305795-91305814 | None:intergenic | 45.0% |
| !! | GCAGTGGAAGCTGTTTTGAA+AGG | + | chr7.2:91305720-91305739 | MS.gene76902:CDS | 45.0% |
| !! | GTGGCATTAGCTTGTGATTC+AGG | - | chr7.2:91305241-91305260 | None:intergenic | 45.0% |
| !! | TGTCATAGGCTTTGAGTGGT+GGG | - | chr7.2:91305794-91305813 | None:intergenic | 45.0% |
| !! | TTGGTTTGGAGCTGACTCTT+GGG | + | chr7.2:91306192-91306211 | MS.gene76902:CDS | 45.0% |
| ACCAGCACGACCGTAGAATT+TGG | - | chr7.2:91305275-91305294 | None:intergenic | 50.0% | |
| ACCGATCACGCCGATAACTT+CGG | + | chr7.2:91305746-91305765 | MS.gene76902:CDS | 50.0% | |
| ACTTCGGAAGCAGCTGCTAA+CGG | + | chr7.2:91305762-91305781 | MS.gene76902:CDS | 50.0% | |
| CAGTGAGAGTGGAGAGGAAA+AGG | + | chr7.2:91306169-91306188 | MS.gene76902:CDS | 50.0% | |
| CGAACCTGGACGAAGATGTT+CGG | - | chr7.2:91305323-91305342 | None:intergenic | 50.0% | |
| CGGTTCATTACCTCCTCAAC+CGG | - | chr7.2:91305999-91306018 | None:intergenic | 50.0% | |
| CGGTTGAGGAGGTAATGAAC+CGG | + | chr7.2:91305997-91306016 | MS.gene76902:CDS | 50.0% | |
| GAACCTGGACGAAGATGTTC+GGG | - | chr7.2:91305322-91305341 | None:intergenic | 50.0% | |
| GAATTTGGCGAGAAACACGG+TGG | - | chr7.2:91305260-91305279 | None:intergenic | 50.0% | |
| GAGAGTGGAGAGGAAAAGGT+TGG | + | chr7.2:91306173-91306192 | MS.gene76902:CDS | 50.0% | |
| GCAGCTGCTTCCGAAGTTAT+CGG | - | chr7.2:91305759-91305778 | None:intergenic | 50.0% | |
| GCTCATGGAATGTGGAGTTG+GGG | + | chr7.2:91306291-91306310 | MS.gene76902:CDS | 50.0% | |
| GGAGTTGGGGCTTCAATATC+CGG | + | chr7.2:91306304-91306323 | MS.gene76902:CDS | 50.0% | |
| GGCTCATGGAATGTGGAGTT+GGG | + | chr7.2:91306290-91306309 | MS.gene76902:CDS | 50.0% | |
| GGTTTCACGCGTTTATCACG+TGG | + | chr7.2:91306223-91306242 | MS.gene76902:CDS | 50.0% | |
| GTTGGACCGGAAAATGAAGC+CGG | + | chr7.2:91306136-91306155 | MS.gene76902:CDS | 50.0% | |
| TCCGAAGTTATCGGCGTGAT+CGG | - | chr7.2:91305750-91305769 | None:intergenic | 50.0% | |
| TGACATCCGTCATGTGTCGA+AGG | + | chr7.2:91305809-91305828 | MS.gene76902:CDS | 50.0% | |
| TGGCTCATGGAATGTGGAGT+TGG | + | chr7.2:91306289-91306308 | MS.gene76902:CDS | 50.0% | |
| TTGAGTTAACTCGGTCGACG+CGG | - | chr7.2:91305847-91305866 | None:intergenic | 50.0% | |
| ! | ACGACTCATGACTAGCTGAC+CGG | - | chr7.2:91306019-91306038 | None:intergenic | 50.0% |
| ! | CTTTTCCTCTCCACTCTCAC+TGG | - | chr7.2:91306171-91306190 | None:intergenic | 50.0% |
| !! | AGGATTGTGGTGTTGGCTCA+TGG | + | chr7.2:91306276-91306295 | MS.gene76902:CDS | 50.0% |
| !! | CGACACATGACGGATGTCAT+AGG | - | chr7.2:91305808-91305827 | None:intergenic | 50.0% |
| !! | CGGATGTCATAGGCTTTGAG+TGG | - | chr7.2:91305798-91305817 | None:intergenic | 50.0% |
| !! | GGTCAACCGGCTTCATTTTC+CGG | - | chr7.2:91306145-91306164 | None:intergenic | 50.0% |
| !! | GTTGGTTTGGAGCTGACTCT+TGG | + | chr7.2:91306191-91306210 | MS.gene76902:CDS | 50.0% |
| !! | TGGTGTTGGCTCATGGAATG+TGG | + | chr7.2:91306283-91306302 | MS.gene76902:CDS | 50.0% |
| CATCCGTCATGTGTCGAAGG+AGG | + | chr7.2:91305812-91305831 | MS.gene76902:CDS | 55.0% | |
| CTTCGGAAGCAGCTGCTAAC+GGG | + | chr7.2:91305763-91305782 | MS.gene76902:CDS | 55.0% | |
| GAGATGAACCGGAGTTGGAC+CGG | + | chr7.2:91306123-91306142 | MS.gene76902:CDS | 55.0% | |
| GCCAAATTCTACGGTCGTGC+TGG | + | chr7.2:91305271-91305290 | MS.gene76902:CDS | 55.0% | |
| GTTGACCGAACCAGTGAGAG+TGG | + | chr7.2:91306158-91306177 | MS.gene76902:CDS | 55.0% | |
| TGGACGAAGATGTTCGGGAC+CGG | - | chr7.2:91305317-91305336 | None:intergenic | 55.0% | |
| TTCAACTGAGCCGACCGGTT+CGG | + | chr7.2:91305968-91305987 | MS.gene76902:CDS | 55.0% | |
| TTCGGTTGAACCGGTTGAGG+AGG | + | chr7.2:91305986-91306005 | MS.gene76902:CDS | 55.0% | |
| ! | CCTCTCCACTCTCACTGGTT+CGG | - | chr7.2:91306166-91306185 | None:intergenic | 55.0% |
| ! | CTCAACCGGTTCAACCGAAC+CGG | - | chr7.2:91305985-91306004 | None:intergenic | 55.0% |
| ! | GATTAGCCACCAGTCTGAGG+CGG | + | chr7.2:91306040-91306059 | MS.gene76902:CDS | 55.0% |
| ! | GCTGACTCTTGGGCTTGAAC+CGG | + | chr7.2:91306202-91306221 | MS.gene76902:CDS | 55.0% |
| ! | GTCGATTAGCCACCAGTCTG+AGG | + | chr7.2:91306037-91306056 | MS.gene76902:CDS | 55.0% |
| ! | TCAAGACTCGGTCGCGTAAG+CGG | + | chr7.2:91305874-91305893 | MS.gene76902:CDS | 55.0% |
| !! | CTCTCACTGGTTCGGTCAAC+CGG | - | chr7.2:91306158-91306177 | None:intergenic | 55.0% |
| CCGAACCAGTGAGAGTGGAG+AGG | + | chr7.2:91306163-91306182 | MS.gene76902:CDS | 60.0% | |
| GAAGCAGCTGCTAACGGGAG+GGG | + | chr7.2:91305768-91305787 | MS.gene76902:CDS | 60.0% | |
| GCAGCTATGTCAAGCCGCAG+TGG | + | chr7.2:91305704-91305723 | MS.gene76902:CDS | 60.0% | |
| GGAAGCAGCTGCTAACGGGA+GGG | + | chr7.2:91305767-91305786 | MS.gene76902:CDS | 60.0% | |
| GGTCCCGAACATCTTCGTCC+AGG | + | chr7.2:91305316-91305335 | MS.gene76902:CDS | 60.0% | |
| GTTCGGGACCGGCGTTAACA+AGG | - | chr7.2:91305306-91305325 | None:intergenic | 60.0% | |
| TCCGGTTCAACTGAGCCGAC+CGG | + | chr7.2:91305963-91305982 | MS.gene76902:CDS | 60.0% | |
| ! | ACCGGTCGGCTCAGTTGAAC+CGG | - | chr7.2:91305967-91305986 | None:intergenic | 60.0% |
| ! | ACCGGTTCAACCGAACCGGT+CGG | - | chr7.2:91305981-91306000 | None:intergenic | 60.0% |
| !! | CGGTTCGGTTGAACCGGTTG+AGG | + | chr7.2:91305983-91306002 | MS.gene76902:CDS | 60.0% |
| CGGAAGCAGCTGCTAACGGG+AGG | + | chr7.2:91305766-91305785 | MS.gene76902:CDS | 65.0% | |
| ! | CCACCAGTCTGAGGCGGTTG+CGG | + | chr7.2:91306046-91306065 | MS.gene76902:CDS | 65.0% |
| !! | GCCGACCGGTTCGGTTGAAC+CGG | + | chr7.2:91305977-91305996 | MS.gene76902:CDS | 65.0% |
| CCACCGCAACCGCCTCAGAC+TGG | - | chr7.2:91306052-91306071 | None:intergenic | 70.0% | |
| CCGCAACCGCCTCAGACTGG+TGG | - | chr7.2:91306049-91306068 | None:intergenic | 70.0% | |
| ! | CCAGTCTGAGGCGGTTGCGG+TGG | + | chr7.2:91306049-91306068 | MS.gene76902:CDS | 70.0% |
| ! | GTCTGAGGCGGTTGCGGTGG+TGG | + | chr7.2:91306052-91306071 | MS.gene76902:CDS | 70.0% |
| !! | GAGGCGGTTGCGGTGGTGGA+TGG | + | chr7.2:91306056-91306075 | MS.gene76902:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 91305148 | 91306331 | 91305148 | ID=MS.gene76902 |
| chr7.2 | mRNA | 91305148 | 91306331 | 91305148 | ID=MS.gene76902.t1;Parent=MS.gene76902 |
| chr7.2 | exon | 91305148 | 91305337 | 91305148 | ID=MS.gene76902.t1.exon1;Parent=MS.gene76902.t1 |
| chr7.2 | CDS | 91305148 | 91305337 | 91305148 | ID=cds.MS.gene76902.t1;Parent=MS.gene76902.t1 |
| chr7.2 | exon | 91305616 | 91306331 | 91305616 | ID=MS.gene76902.t1.exon2;Parent=MS.gene76902.t1 |
| chr7.2 | CDS | 91305616 | 91306331 | 91305616 | ID=cds.MS.gene76902.t1;Parent=MS.gene76902.t1 |
| Gene Sequence |
| Protein sequence |
