Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77815.t1 | XP_003628123.1 | 89.3 | 280 | 21 | 1 | 1 | 280 | 5 | 275 | 1.50E-125 | 459.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77815.t1 | Q9LES3 | 47.8 | 276 | 117 | 7 | 10 | 280 | 6 | 259 | 9.3e-44 | 178.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77815.t1 | G7L6Z1 | 89.3 | 280 | 21 | 1 | 1 | 280 | 5 | 275 | 1.1e-125 | 459.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049825 | MS.gene77815 | 0.811243 | 7.72E-51 | -1.69E-46 |
| MS.gene050303 | MS.gene77815 | 0.82656 | 2.54E-54 | -1.69E-46 |
| MS.gene052358 | MS.gene77815 | -0.802669 | 5.03E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene77815 | 0.805041 | 1.62E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene77815 | 0.829822 | 4.15E-55 | -1.69E-46 |
| MS.gene05954 | MS.gene77815 | 0.855132 | 7.74E-62 | -1.69E-46 |
| MS.gene060634 | MS.gene77815 | -0.800848 | 1.19E-48 | -1.69E-46 |
| MS.gene061040 | MS.gene77815 | -0.841617 | 4.26E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77815.t1 | MTR_8g043960 | 89.286 | 280 | 21 | 1 | 1 | 280 | 5 | 275 | 7.59e-175 | 485 |
| MS.gene77815.t1 | MTR_3g010660 | 61.404 | 285 | 103 | 4 | 2 | 280 | 1 | 284 | 1.81e-118 | 343 |
| MS.gene77815.t1 | MTR_7g088090 | 44.251 | 287 | 129 | 8 | 2 | 271 | 1 | 273 | 2.59e-61 | 197 |
| MS.gene77815.t1 | MTR_6g026800 | 45.588 | 272 | 122 | 7 | 2 | 258 | 1 | 261 | 4.38e-60 | 194 |
| MS.gene77815.t1 | MTR_5g088230 | 54.422 | 147 | 60 | 3 | 1 | 144 | 5 | 147 | 2.79e-32 | 120 |
| MS.gene77815.t1 | MTR_5g088230 | 54.483 | 145 | 59 | 3 | 2 | 143 | 1 | 141 | 1.42e-31 | 118 |
| MS.gene77815.t1 | MTR_3g101780 | 48.529 | 136 | 62 | 3 | 8 | 140 | 14 | 144 | 7.96e-30 | 117 |
| MS.gene77815.t1 | MTR_4g085910 | 45.802 | 131 | 63 | 2 | 19 | 144 | 17 | 144 | 1.43e-29 | 115 |
| MS.gene77815.t1 | MTR_7g104480 | 32.229 | 332 | 134 | 9 | 26 | 272 | 45 | 370 | 3.30e-26 | 107 |
| MS.gene77815.t1 | MTR_5g060990 | 31.908 | 304 | 158 | 11 | 12 | 272 | 4 | 301 | 4.73e-26 | 104 |
| MS.gene77815.t1 | MTR_2g086390 | 32.959 | 267 | 120 | 12 | 23 | 272 | 11 | 235 | 7.36e-23 | 95.9 |
| MS.gene77815.t1 | MTR_2g086390 | 32.331 | 266 | 123 | 12 | 23 | 272 | 11 | 235 | 1.39e-22 | 95.1 |
| MS.gene77815.t1 | MTR_2g086340 | 30.800 | 250 | 139 | 9 | 22 | 258 | 24 | 252 | 3.04e-22 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77815.t1 | AT3G56850 | 48.175 | 274 | 103 | 8 | 18 | 280 | 14 | 259 | 2.25e-62 | 199 |
| MS.gene77815.t1 | AT2G41070 | 45.113 | 266 | 86 | 10 | 19 | 280 | 15 | 224 | 1.09e-51 | 170 |
| MS.gene77815.t1 | AT2G41070 | 45.113 | 266 | 86 | 10 | 19 | 280 | 15 | 224 | 2.43e-51 | 169 |
| MS.gene77815.t1 | AT2G41070 | 45.113 | 266 | 86 | 10 | 19 | 280 | 15 | 224 | 2.43e-51 | 169 |
| MS.gene77815.t1 | AT2G41070 | 45.113 | 266 | 86 | 10 | 19 | 280 | 15 | 224 | 2.43e-51 | 169 |
| MS.gene77815.t1 | AT2G41070 | 45.113 | 266 | 86 | 10 | 19 | 280 | 24 | 233 | 3.23e-51 | 169 |
| MS.gene77815.t1 | AT1G49720 | 45.455 | 165 | 70 | 5 | 7 | 157 | 11 | 169 | 3.11e-31 | 120 |
| MS.gene77815.t1 | AT1G49720 | 44.186 | 172 | 76 | 5 | 7 | 163 | 11 | 177 | 3.46e-31 | 120 |
| MS.gene77815.t1 | AT1G49720 | 44.186 | 172 | 76 | 5 | 7 | 163 | 11 | 177 | 3.46e-31 | 120 |
| MS.gene77815.t1 | AT2G36270 | 32.011 | 353 | 134 | 11 | 19 | 272 | 36 | 381 | 2.25e-29 | 116 |
| MS.gene77815.t1 | AT2G36270 | 32.011 | 353 | 134 | 11 | 19 | 272 | 36 | 381 | 2.25e-29 | 116 |
| MS.gene77815.t1 | AT2G36270 | 32.011 | 353 | 134 | 11 | 19 | 272 | 36 | 381 | 5.28e-29 | 115 |
| MS.gene77815.t1 | AT3G19290 | 46.429 | 140 | 56 | 3 | 20 | 140 | 34 | 173 | 8.33e-26 | 105 |
| MS.gene77815.t1 | AT3G19290 | 46.429 | 140 | 56 | 3 | 20 | 140 | 34 | 173 | 9.85e-26 | 105 |
| MS.gene77815.t1 | AT3G19290 | 46.429 | 140 | 56 | 3 | 20 | 140 | 34 | 173 | 1.43e-25 | 105 |
| MS.gene77815.t1 | AT3G19290 | 46.429 | 140 | 56 | 3 | 20 | 140 | 34 | 173 | 1.43e-25 | 105 |
| MS.gene77815.t1 | AT3G19290 | 46.429 | 140 | 56 | 3 | 20 | 140 | 34 | 173 | 1.58e-25 | 105 |
| MS.gene77815.t1 | AT4G34000 | 39.130 | 161 | 58 | 3 | 20 | 140 | 27 | 187 | 6.28e-24 | 100 |
| MS.gene77815.t1 | AT4G34000 | 39.130 | 161 | 58 | 3 | 20 | 140 | 27 | 187 | 9.90e-24 | 100 |
| MS.gene77815.t1 | AT4G34000 | 39.130 | 161 | 58 | 3 | 20 | 140 | 27 | 187 | 9.90e-24 | 100 |
| MS.gene77815.t1 | AT4G34000 | 39.130 | 161 | 58 | 3 | 20 | 140 | 27 | 187 | 9.90e-24 | 100 |
| MS.gene77815.t1 | AT3G44460 | 37.008 | 254 | 112 | 13 | 22 | 258 | 37 | 259 | 1.38e-23 | 98.6 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 3.47e-21 | 92.4 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 3.47e-21 | 92.4 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 6.81e-21 | 92.0 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 6.81e-21 | 92.0 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 6.81e-21 | 92.0 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 6.81e-21 | 92.0 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 36 | 168 | 9.98e-21 | 91.7 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 36 | 168 | 9.98e-21 | 91.7 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 1.05e-20 | 91.7 |
| MS.gene77815.t1 | AT1G45249 | 41.176 | 136 | 62 | 3 | 20 | 140 | 21 | 153 | 1.42e-20 | 91.3 |
| MS.gene77815.t1 | AT5G42910 | 28.086 | 324 | 144 | 14 | 19 | 274 | 19 | 321 | 1.70e-17 | 82.0 |
Find 72 sgRNAs with CRISPR-Local
Find 75 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCATTGGGTGCACCTCTTA+TGG | 0.223647 | 8.1:-60763839 | MS.gene77815:CDS |
| GATGACATTGGAGGATTTCT+TGG | 0.249290 | 8.1:-60764109 | MS.gene77815:CDS |
| CAAAATCAATTAGGTGACTT+AGG | 0.335660 | 8.1:-60764381 | MS.gene77815:CDS |
| CGAGAGAGACAAACTACTTT+AGG | 0.337274 | 8.1:-60764135 | MS.gene77815:CDS |
| CGCAGATGCCTGGAAGAAAA+AGG | 0.341085 | 8.1:-60763801 | MS.gene77815:CDS |
| GATGAAGTTCAAAATCAATT+AGG | 0.351054 | 8.1:-60764390 | MS.gene77815:CDS |
| AAGGAGCACTCCAGAGGATA+TGG | 0.352037 | 8.1:-60763782 | MS.gene77815:CDS |
| CTGTTTCCGTGCTCTTGAAC+GGG | 0.379424 | 8.1:+60763702 | None:intergenic |
| GCCTTCATTGTCCGTATTCG+TGG | 0.383060 | 8.1:+60764290 | None:intergenic |
| CCGTTCAAGAGCACGGAAAC+AGG | 0.394263 | 8.1:-60763701 | MS.gene77815:CDS |
| TCTACAACGTCAAGCTAGTC+TGG | 0.406297 | 8.1:-60764244 | MS.gene77815:CDS |
| GCATTGGGTGCACCTCTTAT+GGG | 0.408513 | 8.1:-60763838 | MS.gene77815:CDS |
| CATTGTCCGTATTCGTGGAC+TGG | 0.421785 | 8.1:+60764295 | None:intergenic |
| AGAGGACTGTGGATGAGGTT+TGG | 0.422682 | 8.1:-60764200 | MS.gene77815:CDS |
| TCTAGGTTCATACTGCTTAG+TGG | 0.432596 | 8.1:+60764354 | None:intergenic |
| AAAATCAATTAGGTGACTTA+GGG | 0.436185 | 8.1:-60764380 | MS.gene77815:CDS |
| AGTATCACAGTTTCCTCTGC+AGG | 0.436415 | 8.1:-60764007 | MS.gene77815:CDS |
| TCCGACACAGTTCCCATAAG+AGG | 0.453901 | 8.1:+60763826 | None:intergenic |
| TCCGTTTGCAGATAGTCATA+TGG | 0.455759 | 8.1:-60763860 | MS.gene77815:CDS |
| AGAAAAGGATGATCAAGAAT+CGG | 0.457820 | 8.1:-60763735 | MS.gene77815:CDS |
| GCAGATAGTCATATGGCATT+GGG | 0.461753 | 8.1:-60763853 | MS.gene77815:CDS |
| CTGTTGAGAGAAGGCAGAAA+AGG | 0.461801 | 8.1:-60763750 | MS.gene77815:CDS |
| TGCAGATAGTCATATGGCAT+TGG | 0.465956 | 8.1:-60763854 | MS.gene77815:CDS |
| CCTGTTTCCGTGCTCTTGAA+CGG | 0.468292 | 8.1:+60763701 | None:intergenic |
| GTGTCGGATACGCAGATGCC+TGG | 0.469471 | 8.1:-60763811 | MS.gene77815:CDS |
| CAGCAAGAGGACTGTGGATG+AGG | 0.475392 | 8.1:-60764205 | MS.gene77815:CDS |
| TAAATGGGAACTCAGACAAT+GGG | 0.478433 | 8.1:-60764498 | None:intergenic |
| GAGGATTTCTTGGTGAAAGC+AGG | 0.483426 | 8.1:-60764099 | MS.gene77815:CDS |
| GGGTCTCAAGGTGGTGGAGA+TGG | 0.487387 | 8.1:-60764477 | MS.gene77815:CDS |
| GTCTTCTCCACCATATCCTC+TGG | 0.490528 | 8.1:+60763772 | None:intergenic |
| TGATACTGCCACATTTGAAT+CGG | 0.495093 | 8.1:+60764023 | None:intergenic |
| TTTAGGAGAGATGACATTGG+AGG | 0.495208 | 8.1:-60764118 | MS.gene77815:CDS |
| GGGGATTTATATGCCTAGCC+AGG | 0.498570 | 8.1:-60763929 | MS.gene77815:CDS |
| CAGCCGTTACACATGGGGTC+TGG | 0.513878 | 8.1:-60763898 | MS.gene77815:CDS |
| GCCATATGACTATCTGCAAA+CGG | 0.520435 | 8.1:+60763859 | None:intergenic |
| GAAAAGGATGATCAAGAATC+GGG | 0.521274 | 8.1:-60763734 | MS.gene77815:CDS |
| CATGGGGTCTGGTGTTTCGA+TGG | 0.522204 | 8.1:-60763887 | MS.gene77815:CDS |
| ACTCAGACAATGGGGTCTCA+AGG | 0.525496 | 8.1:-60764489 | None:intergenic |
| TGTTGTAGATGCTGATATTG+TGG | 0.526222 | 8.1:+60763961 | None:intergenic |
| AGTGAACCAGTCCACGAATA+CGG | 0.529125 | 8.1:-60764301 | MS.gene77815:CDS |
| CAAGGTGGTGGAGATGGTAG+TGG | 0.530920 | 8.1:-60764471 | MS.gene77815:CDS |
| GCATCTACAACAAAGTTCCA+TGG | 0.531471 | 8.1:-60763950 | MS.gene77815:CDS |
| AGTTTCCTCTGCAGGGTCAG+TGG | 0.540111 | 8.1:-60763999 | MS.gene77815:CDS |
| CATCTACAACAAAGTTCCAT+GGG | 0.551430 | 8.1:-60763949 | MS.gene77815:CDS |
| TAAAAGCTGCATTCAGCAAG+AGG | 0.554122 | 8.1:-60764218 | MS.gene77815:CDS |
| AGATGCTGATATTGTGGTTG+CGG | 0.557999 | 8.1:+60763967 | None:intergenic |
| ACAATGGGGTCTCAAGGTGG+TGG | 0.565619 | 8.1:-60764483 | MS.gene77815:CDS |
| ACCTCTTATGGGAACTGTGT+CGG | 0.579301 | 8.1:-60763827 | MS.gene77815:CDS |
| TCCACGAATACGGACAATGA+AGG | 0.580287 | 8.1:-60764291 | MS.gene77815:CDS |
| CTGCTGCCCGTTCAAGAGCA+CGG | 0.591970 | 8.1:-60763708 | MS.gene77815:CDS |
| TATAGCACAGCCGTTACACA+TGG | 0.595784 | 8.1:-60763905 | MS.gene77815:CDS |
| TGGAGAAGACTGTTGAGAGA+AGG | 0.597925 | 8.1:-60763759 | MS.gene77815:CDS |
| GTGGAGATGGTAGTGGAAGA+CGG | 0.609087 | 8.1:-60764464 | MS.gene77815:CDS |
| ACACCAGACCCCATGTGTAA+CGG | 0.609930 | 8.1:+60763895 | None:intergenic |
| CACAACTCCACTCTCTTGTG+AGG | 0.615377 | 8.1:-60764440 | MS.gene77815:CDS |
| GTATCACAGTTTCCTCTGCA+GGG | 0.615727 | 8.1:-60764006 | MS.gene77815:CDS |
| GGCTGTGCTATACCCTGGCT+AGG | 0.624273 | 8.1:+60763916 | None:intergenic |
| GAGCACTCCAGAGGATATGG+TGG | 0.628901 | 8.1:-60763779 | MS.gene77815:CDS |
| TACTTTAGGAGAGATGACAT+TGG | 0.639124 | 8.1:-60764121 | MS.gene77815:CDS |
| GGGATTTATATGCCTAGCCA+GGG | 0.641870 | 8.1:-60763928 | MS.gene77815:CDS |
| TGTAACCACTGACCCTGCAG+AGG | 0.647637 | 8.1:+60763994 | None:intergenic |
| GTCTGCGGCCGATTCAAATG+TGG | 0.651473 | 8.1:-60764031 | MS.gene77815:CDS |
| GCTAGGCATATAAATCCCCA+TGG | 0.652039 | 8.1:+60763933 | None:intergenic |
| TAGCACAGCCGTTACACATG+GGG | 0.656286 | 8.1:-60763903 | MS.gene77815:CDS |
| GAATACTGATACTACGTCTG+CGG | 0.684349 | 8.1:-60764046 | MS.gene77815:CDS |
| CAGACAATGGGGTCTCAAGG+TGG | 0.688721 | 8.1:-60764486 | MS.gene77815:CDS |
| GTAACGGCTGTGCTATACCC+TGG | 0.689448 | 8.1:+60763911 | None:intergenic |
| ATAGCACAGCCGTTACACAT+GGG | 0.689708 | 8.1:-60763904 | MS.gene77815:CDS |
| TGCATTCAGCAAGAGGACTG+TGG | 0.691129 | 8.1:-60764211 | MS.gene77815:CDS |
| AAATGGGAACTCAGACAATG+GGG | 0.712282 | 8.1:-60764497 | None:intergenic |
| ATCTACAACAAAGTTCCATG+GGG | 0.739377 | 8.1:-60763948 | MS.gene77815:CDS |
| CCAACAAAAGAAAGACAACG+AGG | 0.748926 | 8.1:-60764169 | MS.gene77815:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAACAAATCAAATAATA+AGG | + | chr8.1:60764480-60764499 | None:intergenic | 15.0% |
| ! | AAAATCAATTAGGTGACTTA+GGG | - | chr8.1:60763736-60763755 | MS.gene77815:CDS | 25.0% |
| ! | GATGAAGTTCAAAATCAATT+AGG | - | chr8.1:60763726-60763745 | MS.gene77815:CDS | 25.0% |
| AGAAAAGGATGATCAAGAAT+CGG | - | chr8.1:60764381-60764400 | MS.gene77815:CDS | 30.0% | |
| CAAAATCAATTAGGTGACTT+AGG | - | chr8.1:60763735-60763754 | MS.gene77815:CDS | 30.0% | |
| ATCTACAACAAAGTTCCATG+GGG | - | chr8.1:60764168-60764187 | MS.gene77815:CDS | 35.0% | |
| CATCTACAACAAAGTTCCAT+GGG | - | chr8.1:60764167-60764186 | MS.gene77815:CDS | 35.0% | |
| GAAAAGGATGATCAAGAATC+GGG | - | chr8.1:60764382-60764401 | MS.gene77815:CDS | 35.0% | |
| TGATACTGCCACATTTGAAT+CGG | + | chr8.1:60764096-60764115 | None:intergenic | 35.0% | |
| TGTTGTAGATGCTGATATTG+TGG | + | chr8.1:60764158-60764177 | None:intergenic | 35.0% | |
| ! | ACGAGCTTCTGAAAAATGTA+TGG | - | chr8.1:60763784-60763803 | MS.gene77815:CDS | 35.0% |
| ! | TACTTTAGGAGAGATGACAT+TGG | - | chr8.1:60763995-60764014 | MS.gene77815:CDS | 35.0% |
| AGATGCTGATATTGTGGTTG+CGG | + | chr8.1:60764152-60764171 | None:intergenic | 40.0% | |
| CCAACAAAAGAAAGACAACG+AGG | - | chr8.1:60763947-60763966 | MS.gene77815:CDS | 40.0% | |
| CGAGAGAGACAAACTACTTT+AGG | - | chr8.1:60763981-60764000 | MS.gene77815:CDS | 40.0% | |
| GAATACTGATACTACGTCTG+CGG | - | chr8.1:60764070-60764089 | MS.gene77815:CDS | 40.0% | |
| GATGACATTGGAGGATTTCT+TGG | - | chr8.1:60764007-60764026 | MS.gene77815:CDS | 40.0% | |
| GCAGATAGTCATATGGCATT+GGG | - | chr8.1:60764263-60764282 | MS.gene77815:CDS | 40.0% | |
| GCATCTACAACAAAGTTCCA+TGG | - | chr8.1:60764166-60764185 | MS.gene77815:CDS | 40.0% | |
| GCCATATGACTATCTGCAAA+CGG | + | chr8.1:60764260-60764279 | None:intergenic | 40.0% | |
| TAAAAGCTGCATTCAGCAAG+AGG | - | chr8.1:60763898-60763917 | MS.gene77815:CDS | 40.0% | |
| TCCGTTTGCAGATAGTCATA+TGG | - | chr8.1:60764256-60764275 | MS.gene77815:CDS | 40.0% | |
| TCTAGGTTCATACTGCTTAG+TGG | + | chr8.1:60763765-60763784 | None:intergenic | 40.0% | |
| TGCAGATAGTCATATGGCAT+TGG | - | chr8.1:60764262-60764281 | MS.gene77815:CDS | 40.0% | |
| TTTAGGAGAGATGACATTGG+AGG | - | chr8.1:60763998-60764017 | MS.gene77815:CDS | 40.0% | |
| ! | AATTTTGCCTCACAAGAGAG+TGG | + | chr8.1:60763686-60763705 | None:intergenic | 40.0% |
| ! | CCTCGTTGTCTTTCTTTTGT+TGG | + | chr8.1:60763950-60763969 | None:intergenic | 40.0% |
| !! | CATTTTTCAGAAGCTCGTCT+AGG | + | chr8.1:60763782-60763801 | None:intergenic | 40.0% |
| ACCTCTTATGGGAACTGTGT+CGG | - | chr8.1:60764289-60764308 | MS.gene77815:CDS | 45.0% | |
| AGTATCACAGTTTCCTCTGC+AGG | - | chr8.1:60764109-60764128 | MS.gene77815:CDS | 45.0% | |
| AGTGAACCAGTCCACGAATA+CGG | - | chr8.1:60763815-60763834 | MS.gene77815:CDS | 45.0% | |
| ATAGCACAGCCGTTACACAT+GGG | - | chr8.1:60764212-60764231 | MS.gene77815:CDS | 45.0% | |
| CTGTTGAGAGAAGGCAGAAA+AGG | - | chr8.1:60764366-60764385 | MS.gene77815:CDS | 45.0% | |
| GAGGATTTCTTGGTGAAAGC+AGG | - | chr8.1:60764017-60764036 | MS.gene77815:CDS | 45.0% | |
| GCTAGGCATATAAATCCCCA+TGG | + | chr8.1:60764186-60764205 | None:intergenic | 45.0% | |
| GGGATTTATATGCCTAGCCA+GGG | - | chr8.1:60764188-60764207 | MS.gene77815:CDS | 45.0% | |
| GTATCACAGTTTCCTCTGCA+GGG | - | chr8.1:60764110-60764129 | MS.gene77815:CDS | 45.0% | |
| TATAGCACAGCCGTTACACA+TGG | - | chr8.1:60764211-60764230 | MS.gene77815:CDS | 45.0% | |
| TCCACGAATACGGACAATGA+AGG | - | chr8.1:60763825-60763844 | MS.gene77815:CDS | 45.0% | |
| TCTACAACGTCAAGCTAGTC+TGG | - | chr8.1:60763872-60763891 | MS.gene77815:CDS | 45.0% | |
| TGGAGAAGACTGTTGAGAGA+AGG | - | chr8.1:60764357-60764376 | MS.gene77815:CDS | 45.0% | |
| !! | AAGAAAAAGGAGCACTCCAG+AGG | - | chr8.1:60764328-60764347 | MS.gene77815:CDS | 45.0% |
| ACACCAGACCCCATGTGTAA+CGG | + | chr8.1:60764224-60764243 | None:intergenic | 50.0% | |
| AGAGGACTGTGGATGAGGTT+TGG | - | chr8.1:60763916-60763935 | MS.gene77815:CDS | 50.0% | |
| CACAACTCCACTCTCTTGTG+AGG | - | chr8.1:60763676-60763695 | MS.gene77815:CDS | 50.0% | |
| CATTGTCCGTATTCGTGGAC+TGG | + | chr8.1:60763824-60763843 | None:intergenic | 50.0% | |
| CCTGTTTCCGTGCTCTTGAA+CGG | + | chr8.1:60764418-60764437 | None:intergenic | 50.0% | |
| CGCAGATGCCTGGAAGAAAA+AGG | - | chr8.1:60764315-60764334 | MS.gene77815:CDS | 50.0% | |
| CTGTTTCCGTGCTCTTGAAC+GGG | + | chr8.1:60764417-60764436 | None:intergenic | 50.0% | |
| GCATTGGGTGCACCTCTTAT+GGG | - | chr8.1:60764278-60764297 | MS.gene77815:CDS | 50.0% | |
| GCCTTCATTGTCCGTATTCG+TGG | + | chr8.1:60763829-60763848 | None:intergenic | 50.0% | |
| GGGGATTTATATGCCTAGCC+AGG | - | chr8.1:60764187-60764206 | MS.gene77815:CDS | 50.0% | |
| GTCTTCTCCACCATATCCTC+TGG | + | chr8.1:60764347-60764366 | None:intergenic | 50.0% | |
| TAGCACAGCCGTTACACATG+GGG | - | chr8.1:60764213-60764232 | MS.gene77815:CDS | 50.0% | |
| TCCGACACAGTTCCCATAAG+AGG | + | chr8.1:60764293-60764312 | None:intergenic | 50.0% | |
| TGCATTCAGCAAGAGGACTG+TGG | - | chr8.1:60763905-60763924 | MS.gene77815:CDS | 50.0% | |
| !! | AAGGAGCACTCCAGAGGATA+TGG | - | chr8.1:60764334-60764353 | MS.gene77815:CDS | 50.0% |
| !! | GGAGTGCTCCTTTTTCTTCC+AGG | + | chr8.1:60764326-60764345 | None:intergenic | 50.0% |
| !! | GTGGAGATGGTAGTGGAAGA+CGG | - | chr8.1:60763652-60763671 | MS.gene77815:CDS | 50.0% |
| ACAATGGGGTCTCAAGGTGG+TGG | - | chr8.1:60763633-60763652 | MS.gene77815:CDS | 55.0% | |
| AGTTTCCTCTGCAGGGTCAG+TGG | - | chr8.1:60764117-60764136 | MS.gene77815:CDS | 55.0% | |
| CAGCAAGAGGACTGTGGATG+AGG | - | chr8.1:60763911-60763930 | MS.gene77815:CDS | 55.0% | |
| CATGGGGTCTGGTGTTTCGA+TGG | - | chr8.1:60764229-60764248 | MS.gene77815:CDS | 55.0% | |
| GAGCACTCCAGAGGATATGG+TGG | - | chr8.1:60764337-60764356 | MS.gene77815:CDS | 55.0% | |
| GTAACGGCTGTGCTATACCC+TGG | + | chr8.1:60764208-60764227 | None:intergenic | 55.0% | |
| TGTAACCACTGACCCTGCAG+AGG | + | chr8.1:60764125-60764144 | None:intergenic | 55.0% | |
| ! | CCGTTCAAGAGCACGGAAAC+AGG | - | chr8.1:60764415-60764434 | MS.gene77815:CDS | 55.0% |
| ! | GGCATTGGGTGCACCTCTTA+TGG | - | chr8.1:60764277-60764296 | MS.gene77815:CDS | 55.0% |
| ! | GTCTGCGGCCGATTCAAATG+TGG | - | chr8.1:60764085-60764104 | MS.gene77815:CDS | 55.0% |
| !! | CAAGGTGGTGGAGATGGTAG+TGG | - | chr8.1:60763645-60763664 | MS.gene77815:CDS | 55.0% |
| CAGCCGTTACACATGGGGTC+TGG | - | chr8.1:60764218-60764237 | MS.gene77815:CDS | 60.0% | |
| CTGCTGCCCGTTCAAGAGCA+CGG | - | chr8.1:60764408-60764427 | MS.gene77815:CDS | 60.0% | |
| GGCTGTGCTATACCCTGGCT+AGG | + | chr8.1:60764203-60764222 | None:intergenic | 60.0% | |
| GTGTCGGATACGCAGATGCC+TGG | - | chr8.1:60764305-60764324 | MS.gene77815:CDS | 60.0% | |
| !! | GGGTCTCAAGGTGGTGGAGA+TGG | - | chr8.1:60763639-60763658 | MS.gene77815:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 60763633 | 60764505 | 60763633 | ID=MS.gene77815 |
| chr8.1 | mRNA | 60763633 | 60764505 | 60763633 | ID=MS.gene77815.t1;Parent=MS.gene77815 |
| chr8.1 | exon | 60763633 | 60764505 | 60763633 | ID=MS.gene77815.t1.exon1;Parent=MS.gene77815.t1 |
| chr8.1 | CDS | 60763633 | 60764505 | 60763633 | ID=cds.MS.gene77815.t1;Parent=MS.gene77815.t1 |
| Gene Sequence |
| Protein sequence |
