AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79409

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79409.t1 MTR_3g025880 80.815 417 51 7 1 410 1 395 0.0 530
MS.gene79409.t1 MTR_3g025880 78.439 269 19 5 271 508 175 435 8.78e-91 286
MS.gene79409.t1 MTR_3g025880 58.696 92 31 3 405 492 168 256 9.92e-12 67.8
MS.gene79409.t1 MTR_4g109540 72.800 125 32 1 1 125 1 123 3.45e-62 206
MS.gene79409.t1 MTR_4g109540 69.173 133 31 2 1 125 1 131 1.26e-59 199
MS.gene79409.t1 MTR_7g013730 60.938 128 46 2 1 128 1 124 3.90e-47 165
MS.gene79409.t1 MTR_7g013740 60.800 125 45 2 1 125 1 121 1.32e-45 157
MS.gene79409.t1 MTR_3g014000 47.742 155 53 7 1 148 1 134 1.23e-31 119
MS.gene79409.t1 MTR_3g084040 47.581 124 56 3 1 124 1 115 2.01e-29 113
MS.gene79409.t1 MTR_3g084040 46.296 108 49 3 1 108 1 99 6.04e-23 94.0
MS.gene79409.t1 MTR_3g080130 52.439 82 39 0 45 126 37 118 2.67e-22 93.2
MS.gene79409.t1 MTR_4g070080 52.703 74 35 0 45 118 7 80 3.25e-21 90.1
MS.gene79409.t1 MTR_4g070080 52.703 74 35 0 45 118 7 80 8.80e-21 89.7
MS.gene79409.t1 MTR_7g105260 41.346 104 61 0 45 148 33 136 2.94e-20 87.8
MS.gene79409.t1 MTR_3g075500 44.211 95 51 1 33 127 197 289 8.03e-20 90.5
MS.gene79409.t1 MTR_3g075500 43.529 85 46 1 43 127 108 190 2.22e-11 65.5
MS.gene79409.t1 MTR_4g070140 48.052 77 40 0 45 121 9 85 8.50e-20 87.8
MS.gene79409.t1 MTR_7g099940 39.683 126 66 2 1 125 1 117 1.30e-19 85.9
MS.gene79409.t1 MTR_4g063560 41.111 90 53 0 33 122 22 111 2.57e-19 84.0
MS.gene79409.t1 MTR_1g064230 45.349 86 47 0 43 128 195 280 3.14e-18 85.5
MS.gene79409.t1 MTR_4g081520 44.578 83 46 0 42 124 49 131 3.51e-18 81.6
MS.gene79409.t1 MTR_4g104470 50.000 82 41 0 47 128 219 300 6.65e-18 85.1
MS.gene79409.t1 MTR_4g104470 41.667 84 47 1 43 126 121 202 8.22e-12 66.6
MS.gene79409.t1 MTR_4g070190 50.000 76 38 0 45 120 9 84 1.08e-16 78.2
MS.gene79409.t1 MTR_3g029580 40.196 102 57 2 19 118 7 106 5.54e-16 75.1
MS.gene79409.t1 MTR_6g477870 41.250 80 47 0 44 123 95 174 6.79e-16 76.3
MS.gene79409.t1 MTR_3g116130 41.237 97 54 3 32 126 16 111 8.93e-15 75.5
MS.gene79409.t1 MTR_3g055990 44.304 79 42 1 45 123 7 83 4.01e-14 75.1
MS.gene79409.t1 MTR_3g055990 44.304 79 42 1 45 123 7 83 4.57e-14 75.1
MS.gene79409.t1 MTR_3g116130 41.237 97 54 3 32 126 16 111 6.72e-14 73.9
MS.gene79409.t1 MTR_4g081510 41.379 87 49 1 39 125 39 123 1.05e-13 70.1
MS.gene79409.t1 MTR_2g096560 42.500 80 46 0 44 123 7 86 1.09e-13 67.4
MS.gene79409.t1 MTR_5g097580 43.038 79 43 1 45 123 7 83 1.29e-13 73.6
MS.gene79409.t1 MTR_7g117495 41.667 84 48 1 38 121 12 94 1.47e-13 71.2
MS.gene79409.t1 MTR_5g097580 43.038 79 43 1 45 123 7 83 1.56e-13 73.6
MS.gene79409.t1 MTR_4g035310 38.824 85 49 2 38 121 10 92 1.74e-13 71.2
MS.gene79409.t1 MTR_7g117495 41.667 84 48 1 38 121 12 94 2.04e-13 70.9
MS.gene79409.t1 MTR_3g075500 43.421 76 41 1 33 108 197 270 2.09e-13 71.2
MS.gene79409.t1 MTR_3g075500 44.578 83 44 1 45 127 110 190 1.28e-11 65.9
MS.gene79409.t1 MTR_4g035310 38.824 85 49 2 38 121 10 92 2.18e-13 71.2
MS.gene79409.t1 MTR_1g045510 41.463 82 46 1 42 121 200 281 2.89e-13 70.9
MS.gene79409.t1 MTR_1g045510 38.095 84 51 1 43 125 112 195 2.42e-12 68.2
MS.gene79409.t1 MTR_3g092490 39.326 89 49 2 44 130 26 111 3.13e-13 70.1
MS.gene79409.t1 MTR_3g092490 39.326 89 49 2 44 130 26 111 3.14e-13 70.1
MS.gene79409.t1 MTR_6g477870 41.538 65 38 0 44 108 95 159 3.62e-13 68.2
MS.gene79409.t1 MTR_1g092860 37.500 80 50 0 45 124 193 272 4.67e-13 70.1
MS.gene79409.t1 MTR_8g024520 39.773 88 44 2 38 121 19 101 4.70e-13 70.1
MS.gene79409.t1 MTR_8g024520 39.773 88 44 2 38 121 19 101 4.82e-13 70.1
MS.gene79409.t1 MTR_4g094235 43.421 76 43 0 46 121 18 93 5.61e-13 70.1
MS.gene79409.t1 MTR_4g094235 43.421 76 43 0 46 121 18 93 5.68e-13 70.1
MS.gene79409.t1 MTR_3g029580 39.130 92 52 2 19 108 7 96 6.11e-13 66.6
MS.gene79409.t1 MTR_5g070450 43.421 76 43 0 46 121 18 93 6.60e-13 69.7
MS.gene79409.t1 MTR_3g103420 41.837 98 55 1 45 142 11 106 7.35e-13 70.9
MS.gene79409.t1 MTR_5g044970 36.957 92 57 1 40 130 6 97 8.95e-13 67.0
MS.gene79409.t1 MTR_3g092490 39.130 92 51 2 41 130 23 111 1.20e-12 67.0
MS.gene79409.t1 MTR_3g065190 39.241 79 47 1 46 123 114 192 1.26e-12 70.1
MS.gene79409.t1 MTR_7g106440 32.090 134 82 3 45 178 110 234 2.46e-12 68.6
MS.gene79409.t1 MTR_1g073690 35.616 73 44 1 45 114 7 79 1.32e-11 67.4
MS.gene79409.t1 MTR_1g073690 39.474 76 45 1 45 120 113 187 6.47e-11 65.1
MS.gene79409.t1 MTR_8g022050 40.260 77 46 0 46 122 149 225 1.68e-11 66.6
MS.gene79409.t1 MTR_5g064120 40.476 84 49 1 38 121 10 92 1.72e-11 65.5
MS.gene79409.t1 MTR_4g124940 41.558 77 45 0 46 122 133 209 1.94e-11 66.6
MS.gene79409.t1 MTR_7g107580 38.095 84 52 0 39 122 343 426 2.55e-11 66.2
MS.gene79409.t1 MTR_7g107580 38.095 84 52 0 39 122 344 427 2.67e-11 66.2
MS.gene79409.t1 MTR_1g097280 37.931 87 51 1 38 121 20 106 6.73e-11 65.5
MS.gene79409.t1 MTR_3g109090 38.961 77 47 0 46 122 147 223 9.45e-11 64.7
MS.gene79409.t1 MTR_3g109090 38.961 77 47 0 46 122 131 207 9.83e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79409.t1 AT5G61030 57.258 124 49 2 1 124 1 120 1.02e-45 163
MS.gene79409.t1 AT5G61030 57.258 124 49 2 1 124 1 120 1.02e-45 163
MS.gene79409.t1 AT1G74230 54.918 122 44 3 1 122 1 111 4.32e-37 139
MS.gene79409.t1 AT4G13850 46.094 128 52 3 1 124 1 115 1.60e-27 107
MS.gene79409.t1 AT4G13850 46.094 128 52 3 1 124 1 115 1.71e-27 108
MS.gene79409.t1 AT4G13850 46.094 128 52 3 1 124 1 115 2.20e-27 108
MS.gene79409.t1 AT4G13850 46.094 128 52 3 1 124 1 115 2.53e-27 108
MS.gene79409.t1 AT3G23830 50.562 89 41 1 43 128 34 122 5.94e-25 100
MS.gene79409.t1 AT3G23830 50.562 89 41 1 43 128 34 122 5.94e-25 100
MS.gene79409.t1 AT5G06210 48.454 97 42 1 44 140 34 122 2.10e-23 96.7
MS.gene79409.t1 AT4G24770 50.602 83 41 0 42 124 242 324 7.10e-21 94.4
MS.gene79409.t1 AT4G24770 44.578 83 44 1 45 127 151 231 4.66e-13 70.9
MS.gene79409.t1 AT4G24770 50.602 83 41 0 42 124 242 324 7.10e-21 94.4
MS.gene79409.t1 AT4G24770 44.578 83 44 1 45 127 151 231 4.66e-13 70.9
MS.gene79409.t1 AT1G18630 48.148 81 41 1 38 118 31 110 4.57e-20 87.8
MS.gene79409.t1 AT3G08000 53.012 83 39 0 45 127 42 124 4.60e-20 87.4
MS.gene79409.t1 AT2G37220 48.750 80 41 0 45 124 205 284 3.07e-19 88.6
MS.gene79409.t1 AT2G37220 38.938 113 58 3 12 118 58 165 1.87e-12 68.6
MS.gene79409.t1 AT5G50250 49.383 81 41 0 45 125 208 288 3.41e-18 85.5
MS.gene79409.t1 AT5G50250 44.578 83 44 1 45 127 114 194 6.70e-14 72.8
MS.gene79409.t1 AT3G26420 38.095 84 52 0 38 121 1 84 4.03e-18 84.3
MS.gene79409.t1 AT2G37510 49.351 77 38 1 36 112 27 102 1.66e-17 79.7
MS.gene79409.t1 AT3G53460 47.059 85 44 1 45 128 258 342 2.42e-17 84.0
MS.gene79409.t1 AT3G53460 47.059 85 44 1 45 128 258 342 2.42e-17 84.0
MS.gene79409.t1 AT3G53460 47.059 85 44 1 45 128 258 342 2.42e-17 84.0
MS.gene79409.t1 AT2G21660 50.000 82 41 0 39 120 3 84 2.86e-17 79.7
MS.gene79409.t1 AT3G53460 47.059 85 44 1 45 128 279 363 3.87e-17 83.6
MS.gene79409.t1 AT2G21660 50.000 82 41 0 39 120 3 84 4.28e-17 79.7
MS.gene79409.t1 AT4G13860 48.684 76 39 0 44 119 3 78 1.22e-16 75.5
MS.gene79409.t1 AT5G59865 40.000 95 56 1 30 123 11 105 1.63e-16 76.3
MS.gene79409.t1 AT2G27330 46.154 78 42 0 38 115 15 92 2.34e-16 75.9
MS.gene79409.t1 AT5G04280 38.614 101 60 1 44 144 7 105 2.87e-16 80.5
MS.gene79409.t1 AT5G47320 48.148 81 42 0 44 124 31 111 3.29e-16 78.2
MS.gene79409.t1 AT1G73530 40.206 97 51 1 42 131 75 171 5.05e-16 76.6
MS.gene79409.t1 AT4G39260 44.737 76 42 0 45 120 7 82 6.60e-16 76.3
MS.gene79409.t1 AT3G46020 41.573 89 50 1 43 129 6 94 1.05e-15 73.6
MS.gene79409.t1 AT3G54770 41.176 85 49 1 37 121 10 93 1.85e-15 77.0
MS.gene79409.t1 AT3G54770 41.176 85 49 1 37 121 10 93 2.04e-15 77.0
MS.gene79409.t1 AT4G39260 44.578 83 46 0 45 127 7 89 5.83e-15 70.9
MS.gene79409.t1 AT1G76460 41.935 93 52 2 38 129 18 109 6.67e-15 75.9
MS.gene79409.t1 AT5G54580 44.048 84 45 1 42 125 54 135 2.07e-14 71.6
MS.gene79409.t1 AT2G21690 42.254 71 41 0 47 117 10 80 4.30e-14 69.3
MS.gene79409.t1 AT1G22330 40.678 118 62 5 38 151 11 124 5.06e-14 73.2
MS.gene79409.t1 AT1G60000 45.122 82 43 1 42 121 173 254 5.10e-14 72.8
MS.gene79409.t1 AT1G60000 29.032 124 87 1 43 166 84 206 8.98e-11 63.2
MS.gene79409.t1 AT1G22910 40.506 79 44 2 44 121 13 89 8.90e-14 71.6
MS.gene79409.t1 AT3G07810 41.975 81 45 1 43 123 5 83 9.92e-14 74.3
MS.gene79409.t1 AT1G22910 40.506 79 44 2 44 121 13 89 1.00e-13 71.6
MS.gene79409.t1 AT3G07810 41.975 81 45 1 43 123 5 83 1.00e-13 74.3
MS.gene79409.t1 AT2G46780 37.778 90 52 2 39 125 17 105 1.10e-13 72.8
MS.gene79409.t1 AT2G46780 37.778 90 52 2 39 125 17 105 1.10e-13 72.8
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.53e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.53e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.53e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.53e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.53e-13 73.2
MS.gene79409.t1 AT1G20880 42.353 85 46 2 38 121 18 100 1.76e-13 71.2
MS.gene79409.t1 AT1G20880 42.353 85 46 2 38 121 18 100 1.76e-13 71.2
MS.gene79409.t1 AT1G20880 42.353 85 46 2 38 121 18 100 1.76e-13 71.2
MS.gene79409.t1 AT3G52380 44.578 83 45 1 45 127 117 198 1.77e-13 72.0
MS.gene79409.t1 AT3G52380 35.417 96 61 1 36 131 212 306 4.75e-11 64.7
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.89e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.89e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.89e-13 73.2
MS.gene79409.t1 AT5G55550 44.304 79 42 1 45 123 7 83 1.89e-13 73.2
MS.gene79409.t1 AT4G13860 53.333 60 28 0 60 119 2 61 2.45e-13 65.5
MS.gene79409.t1 AT5G55550 46.479 71 36 1 45 115 7 75 3.10e-13 72.8
MS.gene79409.t1 AT5G55550 46.479 71 36 1 45 115 7 75 3.37e-13 72.4
MS.gene79409.t1 AT5G47620 41.333 75 41 1 43 114 5 79 7.21e-13 71.2
MS.gene79409.t1 AT5G47620 41.333 75 41 1 43 114 5 79 7.21e-13 71.2
MS.gene79409.t1 AT5G47620 41.333 75 41 1 43 114 5 79 7.21e-13 71.2
MS.gene79409.t1 AT4G26650 41.772 79 44 1 45 123 16 92 7.94e-13 71.2
MS.gene79409.t1 AT4G26650 41.772 79 44 1 45 123 13 89 8.21e-13 71.2
MS.gene79409.t1 AT1G60650 36.709 79 50 0 43 121 11 89 8.49e-13 69.7
MS.gene79409.t1 AT1G60650 36.709 79 50 0 43 121 11 89 8.49e-13 69.7
MS.gene79409.t1 AT1G22910 40.506 79 44 2 44 121 13 89 9.46e-13 70.1
MS.gene79409.t1 AT3G20930 37.500 80 50 0 45 124 283 362 9.47e-13 70.5
MS.gene79409.t1 AT5G47620 45.070 71 36 1 43 110 5 75 1.26e-12 70.5
MS.gene79409.t1 AT5G64200 42.105 76 44 0 46 121 18 93 1.88e-12 68.9
MS.gene79409.t1 AT5G64200 42.105 76 44 0 46 121 18 93 1.88e-12 68.9
MS.gene79409.t1 AT1G33470 41.026 78 43 2 44 120 7 82 2.40e-12 67.4
MS.gene79409.t1 AT1G33470 31.138 167 89 6 44 192 7 165 2.51e-12 67.4
MS.gene79409.t1 AT1G33470 41.026 78 43 2 44 120 7 82 2.53e-12 67.4
MS.gene79409.t1 AT2G37510 37.255 102 38 2 36 112 27 127 2.70e-12 65.5
MS.gene79409.t1 AT5G59860 32.710 107 67 1 16 122 43 144 4.27e-12 64.7
MS.gene79409.t1 AT1G07350 36.842 76 48 0 42 117 43 118 8.91e-12 63.2
MS.gene79409.t1 AT1G07350 36.842 76 48 0 42 117 43 118 8.91e-12 63.2
MS.gene79409.t1 AT4G14300 40.506 79 45 1 45 123 7 83 1.05e-11 67.4
MS.gene79409.t1 AT4G14300 40.506 79 45 1 45 123 7 83 1.05e-11 67.4
MS.gene79409.t1 AT4G39260 41.429 70 41 0 45 114 7 76 1.26e-11 62.0
MS.gene79409.t1 AT1G07350 36.842 76 48 0 42 117 73 148 1.76e-11 63.2
MS.gene79409.t1 AT5G19030 32.759 116 61 2 30 128 52 167 1.76e-11 63.5
MS.gene79409.t1 AT1G13690 37.209 86 53 1 46 130 15 100 1.99e-11 63.5
MS.gene79409.t1 AT5G11412 38.356 73 41 1 41 109 49 121 2.88e-11 62.8
MS.gene79409.t1 AT2G18510 31.304 115 66 3 17 123 83 192 3.34e-11 65.5
MS.gene79409.t1 AT3G14100 36.364 77 49 0 46 122 146 222 3.93e-11 65.9
MS.gene79409.t1 AT1G78260 38.462 78 47 1 44 121 17 93 4.26e-11 64.3
MS.gene79409.t1 AT1G54080 36.364 77 49 0 46 122 150 226 6.37e-11 65.1
MS.gene79409.t1 AT5G51300 38.462 78 48 0 43 120 479 556 6.91e-11 65.5
MS.gene79409.t1 AT5G51300 38.462 78 48 0 43 120 479 556 6.91e-11 65.5
MS.gene79409.t1 AT5G51300 38.462 78 48 0 43 120 479 556 6.91e-11 65.5
MS.gene79409.t1 AT1G17370 37.662 77 48 0 46 122 141 217 7.82e-11 64.7
MS.gene79409.t1 AT1G17370 37.662 77 48 0 46 122 141 217 7.90e-11 64.7
MS.gene79409.t1 AT3G20930 35.294 85 50 1 45 124 283 367 8.25e-11 64.3
MS.gene79409.t1 AT5G53680 39.683 63 38 0 41 103 10 72 8.96e-11 61.2
MS.gene79409.t1 AT1G07350 37.333 75 47 0 46 120 77 151 9.14e-11 64.3

Find 201 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTTCTCCACCACTGTAAT+TGG 0.187885 3.1:+16750761 None:intergenic
GGAGGTGGTGGTGGATATTC+AGG 0.196213 3.1:-16751710 MS.gene79409:CDS
GTAGAGTTGGGAGTTTATTA+AGG 0.262081 3.1:-16753817 MS.gene79409:CDS
CTATACCCTGTTGCACTTCC+AGG 0.289310 3.1:+16750603 None:intergenic
GCTCCTGGTGCTGGTGGTTA+TGG 0.294419 3.1:-16750717 MS.gene79409:CDS
CCTCCTGGTGTTGGTGGTTA+TGG 0.295984 3.1:-16751227 MS.gene79409:CDS
CCTCCTGGTGTTGGTGGTTA+TGG 0.295984 3.1:-16751488 MS.gene79409:CDS
GGTTATGGCGGAGGTGGTTA+TGG 0.310693 3.1:-16751617 MS.gene79409:CDS
GCACCTGGTGTTGGTGGTTA+TGG 0.314342 3.1:-16750798 MS.gene79409:CDS
CACTTCCAGGGTATTGATTA+CGG 0.314514 3.1:+16750616 None:intergenic
TATGGTGCTGCTGCTGGATT+TGG 0.314919 3.1:-16750699 MS.gene79409:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.324245 3.1:-16751140 MS.gene79409:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.324245 3.1:-16751314 MS.gene79409:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.324245 3.1:-16751401 MS.gene79409:CDS
GCTCCTGGTGTTGGTGGTTA+TGG 0.326706 3.1:-16751053 MS.gene79409:CDS
GCTCCTGTTGCTGGTGTTTA+CGG 0.332135 3.1:-16750891 MS.gene79409:CDS
CCAAGCCATACGGTGCTTCT+CGG 0.335689 3.1:-16753735 MS.gene79409:CDS
GTTACAGTAATGGCTTTCTT+TGG 0.352828 3.1:-16753839 None:intergenic
GGTGGTTATGGTGCTGCTGC+TGG 0.354151 3.1:-16750705 MS.gene79409:CDS
GCTCCCGGGAGCAGCTTTGC+TGG 0.358288 3.1:-16750567 MS.gene79409:CDS
ACCACCACGGGGTCTTTCAT+TGG 0.359285 3.1:+16751754 None:intergenic
GGAGGCATCAAGTGCCATTC+AGG 0.360417 3.1:-16752970 MS.gene79409:CDS
CAACACCACCGGTACTATAA+TGG 0.362745 3.1:+16750664 None:intergenic
GGTGCTAACAATGCAAATTA+TGG 0.362792 3.1:-16750867 MS.gene79409:CDS
CAATACCCTGGAAGTGCAAC+AGG 0.364374 3.1:-16750609 MS.gene79409:CDS
ACTGGTAGGTCCAAAGGATT+TGG 0.367522 3.1:-16753017 MS.gene79409:CDS
TACGGTAGTGCTCCTGTTGC+TGG 0.368507 3.1:-16750900 MS.gene79409:CDS
GGTGGATATTCAGGTGGTTA+TGG 0.372561 3.1:-16751701 MS.gene79409:CDS
TCCTACAAACAGCTTGGTAT+TGG 0.375210 3.1:+16753706 None:intergenic
TATGGAAACAATGCAAATTA+TGG 0.382926 3.1:-16751122 MS.gene79409:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3.1:-16751296 MS.gene79409:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3.1:-16751383 MS.gene79409:CDS
TATGGAAACAATGCAAATTA+TGG 0.382926 3.1:-16751470 MS.gene79409:CDS
TGGCTTTCTTTGGTAGAGTT+GGG 0.383300 3.1:-16753829 MS.gene79409:CDS
CCTTATGGTGGTGGAGGTGG+TGG 0.387616 3.1:-16751722 MS.gene79409:CDS
TATGGAAACACTGCAAATTA+TGG 0.391093 3.1:-16751209 MS.gene79409:CDS
TATGGTGGTGGAGGTGGTGG+TGG 0.394686 3.1:-16751719 MS.gene79409:CDS
GAAAGCAATTCTGTTAACTA+TGG 0.395798 3.1:-16750744 MS.gene79409:CDS
GAAAGCAATTCTGTTAACTA+TGG 0.398237 3.1:-16750825 MS.gene79409:CDS
TATGGTAACAATGTGAATTA+TGG 0.398804 3.1:-16751035 MS.gene79409:CDS
ATAATTATGGATCGCGAAAC+TGG 0.398913 3.1:-16753035 MS.gene79409:CDS
CCTACAAACAGCTTGGTATT+GGG 0.403404 3.1:+16753707 None:intergenic
GGACCTTATGGTGGTGGAGG+TGG 0.405984 3.1:-16751725 MS.gene79409:CDS
ATCAAGTGCCATTCAGGCCT+TGG 0.407278 3.1:-16752964 MS.gene79409:CDS
ACTTCCAGGGTATTGATTAC+GGG 0.413785 3.1:+16750617 None:intergenic
GGTGGAAACGATGCAAATTA+TGG 0.422269 3.1:-16751557 MS.gene79409:CDS
TATGATAGAACTGGAGGACT+TGG 0.426268 3.1:-16750540 MS.gene79409:CDS
ATGGCTTTCTTTGGTAGAGT+TGG 0.429889 3.1:-16753830 MS.gene79409:CDS
AGTAACAAAGCCAAATCCTT+TGG 0.430233 3.1:+16753007 None:intergenic
GGCTATAGTGGTAATGCTGC+TGG 0.431605 3.1:-16751641 MS.gene79409:CDS
GGAACTACCAGTGGTGGTTA+TGG 0.436521 3.1:-16751578 MS.gene79409:CDS
ATAGTACCGGTGGTGTTGGT+GGG 0.437403 3.1:-16750659 MS.gene79409:CDS
GGTGGTAACAGTGCAAATTA+TGG 0.437840 3.1:-16750960 MS.gene79409:CDS
TATGGTATTGCTCCTGGTGC+TGG 0.438379 3.1:-16750726 MS.gene79409:CDS
GCTCCTGGTGTTGGTGGTTA+CGG 0.443707 3.1:-16750984 MS.gene79409:CDS
CCCAATACCAAGCTGTTTGT+AGG 0.444353 3.1:-16753707 MS.gene79409:CDS
TTTGATGGACCTTATGGTGG+TGG 0.444397 3.1:-16751731 MS.gene79409:CDS
CCACCGTAAACACCAGCAAC+AGG 0.447301 3.1:+16750888 None:intergenic
TATAGTACCGGTGGTGTTGG+TGG 0.447497 3.1:-16750660 MS.gene79409:CDS
CTGTCCATCCAAGGCCTGAA+TGG 0.451832 3.1:+16752956 None:intergenic
GCACCATAACCACCAGCACC+AGG 0.451978 3.1:+16750714 None:intergenic
TCTTCATACGGTGGTGGGTA+TGG 0.456251 3.1:-16751674 MS.gene79409:CDS
GGTAATGCTGCTGGAGGTTA+TGG 0.457740 3.1:-16751632 MS.gene79409:CDS
CAAGCCATACGGTGCTTCTC+GGG 0.458672 3.1:-16753734 MS.gene79409:CDS
GGCAGTGCTCCTGGTGTTGG+TGG 0.458730 3.1:-16750990 MS.gene79409:CDS
GCTAACTATGGCAGTGCTCC+TGG 0.459620 3.1:-16750999 MS.gene79409:CDS
GTTAACTATGGTATTGCTCC+TGG 0.461545 3.1:-16750732 MS.gene79409:CDS
GCTGCTGATACTGCTAACTA+TGG 0.470068 3.1:-16751011 MS.gene79409:CDS
TATGGAAACACTTACAATGA+TGG 0.470763 3.1:-16751599 MS.gene79409:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3.1:-16751080 MS.gene79409:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3.1:-16751167 MS.gene79409:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3.1:-16751254 MS.gene79409:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3.1:-16751341 MS.gene79409:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3.1:-16751428 MS.gene79409:CDS
GAAAGCAATGCTGTTAACTA+TGG 0.472224 3.1:-16751515 MS.gene79409:CDS
ACAACTCACCGTCAAGAACT+TGG 0.473731 3.1:+16753184 None:intergenic
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3.1:-16751068 MS.gene79409:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3.1:-16751155 MS.gene79409:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3.1:-16751329 MS.gene79409:CDS
GTTAACTATGGTAGTGCTCC+TGG 0.474066 3.1:-16751416 MS.gene79409:CDS
GGTAATGCTGCTGGCTATAG+TGG 0.474270 3.1:-16751653 MS.gene79409:CDS
GATGGACCTTATGGTGGTGG+AGG 0.475314 3.1:-16751728 MS.gene79409:CDS
TCCACCAGCAAAGCTGCTCC+CGG 0.475573 3.1:+16750563 None:intergenic
GGTGTTGGTGGTTACGGTGG+TGG 0.476651 3.1:-16750978 MS.gene79409:CDS
ATTACGGGAGAAACCATTGC+TGG 0.481459 3.1:+16750632 None:intergenic
GCTGGTGGATATGATAGAAC+TGG 0.486983 3.1:-16750549 MS.gene79409:CDS
GGTGTTGGTGGTTATGGTGG+TGG 0.487083 3.1:-16750792 MS.gene79409:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3.1:-16751059 MS.gene79409:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3.1:-16751146 MS.gene79409:CDS
GGTAGTCCTCCTGGTGTTGG+TGG 0.492463 3.1:-16751233 MS.gene79409:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3.1:-16751320 MS.gene79409:CDS
GGTAGTGCTCCTGGTGTTGG+TGG 0.492463 3.1:-16751407 MS.gene79409:CDS
GGTAGTCCTCCTGGTGTTGG+TGG 0.492463 3.1:-16751494 MS.gene79409:CDS
CCGAGAAGCACCGTATGGCT+TGG 0.494835 3.1:+16753735 None:intergenic
GTTAACTATGGTAGTCCTCC+TGG 0.498449 3.1:-16751242 MS.gene79409:CDS
GTTAACTATGGTAGTCCTCC+TGG 0.498449 3.1:-16751503 MS.gene79409:CDS
GCAAATTATGGTGCGGCTGT+AGG 0.498773 3.1:-16751110 MS.gene79409:CDS
GCAAATTATGGTGCGGCTGT+AGG 0.498773 3.1:-16751284 MS.gene79409:CDS
GCAAATTATGGTGCGGCTGT+AGG 0.498773 3.1:-16751371 MS.gene79409:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.505159 3.1:-16751197 MS.gene79409:CDS
AGCAGTGGCAGTTCAGCTCC+CGG 0.508874 3.1:-16750582 MS.gene79409:CDS
GGTAGTGCACCTGGTGTTGG+TGG 0.514951 3.1:-16750804 MS.gene79409:CDS
CCCGGGAGCAGCTTTGCTGG+TGG 0.515216 3.1:-16750564 MS.gene79409:CDS
CCACCACCTCCACCACCATA+AGG 0.516234 3.1:+16751722 None:intergenic
CGTATGGCTTGGAAAACAGA+TGG 0.517156 3.1:+16753746 None:intergenic
CATTCAGGCCTTGGATGGAC+AGG 0.517691 3.1:-16752955 MS.gene79409:intron
TATGGCAGTGCTCCTGGTGT+TGG 0.518016 3.1:-16750993 MS.gene79409:CDS
CCTGGTGTTGGTGGTTATGG+TGG 0.520748 3.1:-16750795 MS.gene79409:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3.1:-16751062 MS.gene79409:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3.1:-16751149 MS.gene79409:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3.1:-16751323 MS.gene79409:CDS
TATGGTAGTGCTCCTGGTGT+TGG 0.523204 3.1:-16751410 MS.gene79409:CDS
GCTGGAGGTTATGGCGGAGG+TGG 0.526799 3.1:-16751623 MS.gene79409:CDS
CATTATAGTACCGGTGGTGT+TGG 0.529829 3.1:-16750663 MS.gene79409:CDS
GATCTGCATGGTCGCCGAGT+TGG 0.531154 3.1:-16751788 MS.gene79409:CDS
TAGTACCGGTGGTGTTGGTG+GGG 0.534630 3.1:-16750658 MS.gene79409:CDS
AGTACCGGTGGTGTTGGTGG+GGG 0.540589 3.1:-16750657 MS.gene79409:CDS
TATACCCTGTTGCACTTCCA+GGG 0.541487 3.1:+16750604 None:intergenic
GCAAATTATGGTGCTGCTGT+AGG 0.541604 3.1:-16751545 MS.gene79409:CDS
TATGGTAGTCCTCCTGGTGT+TGG 0.542111 3.1:-16751236 MS.gene79409:CDS
TATGGTAGTCCTCCTGGTGT+TGG 0.542111 3.1:-16751497 MS.gene79409:CDS
GGTAACTCTTCATACGGTGG+TGG 0.542271 3.1:-16751680 MS.gene79409:CDS
GTTAACTATGGTAGTGCACC+TGG 0.543191 3.1:-16750813 MS.gene79409:CDS
GGTGGGTATGGTAATGCTGC+TGG 0.545529 3.1:-16751662 MS.gene79409:CDS
AGTGCCATTCAGGCCTTGGA+TGG 0.546654 3.1:-16752960 MS.gene79409:CDS
AGGTCCATCAAAACCACCAC+GGG 0.547372 3.1:+16751742 None:intergenic
CGCGAAACTGGTAGGTCCAA+AGG 0.548206 3.1:-16753023 MS.gene79409:CDS
CCACCGTAACCACCAACACC+AGG 0.548591 3.1:+16750981 None:intergenic
CCACCAGCAAAGCTGCTCCC+GGG 0.552776 3.1:+16750564 None:intergenic
CTCACCTCCTACAAACAGCT+TGG 0.553614 3.1:+16753700 None:intergenic
GGTATTGCTCCTGGTGCTGG+TGG 0.555665 3.1:-16750723 MS.gene79409:CDS
GCAAATTATGGTGCTGCTGT+AGG 0.557750 3.1:-16751458 MS.gene79409:CDS
TATGGTAGTGCACCTGGTGT+TGG 0.559778 3.1:-16750807 MS.gene79409:CDS
TACTTACAATACTGTTGAGG+AGG 0.563819 3.1:-16752988 MS.gene79409:CDS
GCTGCTGGAGGTTATGGCGG+AGG 0.566970 3.1:-16751626 MS.gene79409:CDS
GGACTTGGATACGGTGAAAG+TGG 0.567518 3.1:-16750525 MS.gene79409:CDS
AGTGATAACCATTATAGTAC+CGG 0.567539 3.1:-16750672 MS.gene79409:CDS
TTCTCCCGTAATCAATACCC+TGG 0.569136 3.1:-16750621 MS.gene79409:CDS
CCACCATAACCACCAACACC+AGG 0.573676 3.1:+16750795 None:intergenic
GCAAATTATGGTACTGCTGT+AGG 0.575266 3.1:-16750855 MS.gene79409:CDS
GCAAATTATGGTGCAGCTGT+AGG 0.577545 3.1:-16750948 MS.gene79409:CDS
AGATATGGCCAAGTTCTTGA+CGG 0.577723 3.1:-16753192 MS.gene79409:intron
TTTCCATAACCACCAACACC+AGG 0.577846 3.1:+16751137 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3.1:+16751311 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3.1:+16751398 None:intergenic
TTTCCATAACCACCAACACC+AGG 0.577846 3.1:+16751485 None:intergenic
TGTTACTTACAATACTGTTG+AGG 0.579889 3.1:-16752991 MS.gene79409:CDS
GCAGTGGCAGTTCAGCTCCC+GGG 0.581433 3.1:-16750581 MS.gene79409:CDS
GAAAGCAATTCTGTTAACTA+CGG 0.582061 3.1:-16750918 MS.gene79409:CDS
GTATGGCTTGGAAAACAGAT+GGG 0.584601 3.1:+16753747 None:intergenic
TATGGTGCGGCTGTAGGCGG+TGG 0.590083 3.1:-16751104 MS.gene79409:CDS
TATGGTGCGGCTGTAGGCGG+TGG 0.590083 3.1:-16751278 MS.gene79409:CDS
TATGGTGCGGCTGTAGGCGG+TGG 0.590083 3.1:-16751365 MS.gene79409:CDS
CTGAGTTACCTGTCCATCCA+AGG 0.590534 3.1:+16752947 None:intergenic
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3.1:-16751191 MS.gene79409:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3.1:-16751452 MS.gene79409:CDS
TATGGTGCTGCTGTAGGCGG+TGG 0.593381 3.1:-16751539 MS.gene79409:CDS
GGTTATGGTAACTCTTCATA+CGG 0.593911 3.1:-16751686 MS.gene79409:CDS
AGAACTGGAGGACTTGGATA+CGG 0.599018 3.1:-16750534 MS.gene79409:CDS
GGTGGTGGTGGATATTCAGG+TGG 0.605763 3.1:-16751707 MS.gene79409:CDS
AACAGTGCCAATTACAGTGG+TGG 0.607861 3.1:-16750768 MS.gene79409:CDS
TTTCCATAACCACCAACACC+AGG 0.608408 3.1:+16751224 None:intergenic
TATGGTGCAGCTGTAGGTGG+TGG 0.611426 3.1:-16750942 MS.gene79409:CDS
AATACCAAGCTGTTTGTAGG+AGG 0.614431 3.1:-16753704 MS.gene79409:intron
TTACGGGAGAAACCATTGCT+GGG 0.614736 3.1:+16750633 None:intergenic
TTACCATAACCACCAACACC+AGG 0.615865 3.1:+16751050 None:intergenic
GTTTCCACCATAACCACCAC+TGG 0.622310 3.1:+16751571 None:intergenic
AATTATGGTGCGGCTGTAGG+CGG 0.623218 3.1:-16751107 MS.gene79409:CDS
AATTATGGTGCGGCTGTAGG+CGG 0.623218 3.1:-16751281 MS.gene79409:CDS
AATTATGGTGCGGCTGTAGG+CGG 0.623218 3.1:-16751368 MS.gene79409:CDS
TTATGGATCGCGAAACTGGT+AGG 0.623605 3.1:-16753031 MS.gene79409:CDS
ACTACCAGTGGTGGTTATGG+TGG 0.626441 3.1:-16751575 MS.gene79409:CDS
TGGCAAAATTTACACCAACT+CGG 0.629242 3.1:+16751774 None:intergenic
AGTACCCGAGAAGCACCGTA+TGG 0.630479 3.1:+16753730 None:intergenic
TACAATGATGGAACTACCAG+TGG 0.633369 3.1:-16751587 MS.gene79409:CDS
AATGCTGCTGGAGGTTATGG+CGG 0.635356 3.1:-16751629 MS.gene79409:CDS
CCTGGTGTTGGTGGTTACGG+TGG 0.637484 3.1:-16750981 MS.gene79409:CDS
AATTATGGTGCAGCTGTAGG+TGG 0.644220 3.1:-16750945 MS.gene79409:CDS
GTAACTCTTCATACGGTGGT+GGG 0.644863 3.1:-16751679 MS.gene79409:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3.1:-16751194 MS.gene79409:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3.1:-16751455 MS.gene79409:CDS
AATTATGGTGCTGCTGTAGG+CGG 0.652021 3.1:-16751542 MS.gene79409:CDS
AATGATGGAACTACCAGTGG+TGG 0.655253 3.1:-16751584 MS.gene79409:CDS
CCTGTTGCTGGTGTTTACGG+TGG 0.660993 3.1:-16750888 MS.gene79409:CDS
GCCAATGAAAGACCCCGTGG+TGG 0.663368 3.1:-16751755 MS.gene79409:CDS
GATAACCATTATAGTACCGG+TGG 0.664559 3.1:-16750669 MS.gene79409:CDS
AGTGCAACAGGGTATAGCAG+TGG 0.673542 3.1:-16750597 MS.gene79409:CDS
GGTGGATATGATAGAACTGG+AGG 0.686015 3.1:-16750546 MS.gene79409:CDS
TATGGTAACTCTTCATACGG+TGG 0.686177 3.1:-16751683 MS.gene79409:CDS
AAGGTCCATCAAAACCACCA+CGG 0.693888 3.1:+16751741 None:intergenic
TATGGCTTGGAAAACAGATG+GGG 0.700345 3.1:+16753748 None:intergenic
CCATAACCACCAACACCAGG+AGG 0.710651 3.1:+16751227 None:intergenic
CCATAACCACCAACACCAGG+AGG 0.710651 3.1:+16751488 None:intergenic
AATACCCTGGAAGTGCAACA+GGG 0.711945 3.1:-16750608 MS.gene79409:CDS
TTTGCCAATGAAAGACCCCG+TGG 0.723240 3.1:-16751758 MS.gene79409:CDS
TATAGTGGTAATGCTGCTGG+AGG 0.728658 3.1:-16751638 MS.gene79409:CDS
AAACAATGCAAATTATGGTG+CGG 0.743182 3.1:-16751117 MS.gene79409:CDS
AAACAATGCAAATTATGGTG+CGG 0.743182 3.1:-16751291 MS.gene79409:CDS
AAACAATGCAAATTATGGTG+CGG 0.743182 3.1:-16751378 MS.gene79409:CDS
GGTAACAGTGCCAATTACAG+TGG 0.753278 3.1:-16750771 MS.gene79409:CDS
GGTCCATCAAAACCACCACG+GGG 0.809353 3.1:+16751743 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTCATATATATTGAAAATT+AGG - chr3.1:16750665-16750684 MS.gene79409:CDS 10.0%
!!! TGTCTAATTATTATTTTTTT+TGG - chr3.1:16752058-16752077 MS.gene79409:intron 10.0%
!! ATACTTCATGTTAATTTAAT+TGG - chr3.1:16752417-16752436 MS.gene79409:intron 15.0%
!! CATTCATAAATAAATAAGAA+AGG + chr3.1:16752473-16752492 None:intergenic 15.0%
!!! ATTATTATTTTTTTTGGTAG+TGG - chr3.1:16752064-16752083 MS.gene79409:intron 15.0%
!!! CAATTATGGATTAATTATAT+AGG + chr3.1:16752167-16752186 None:intergenic 15.0%
!! AAATTATTTATCAGTGTCTA+CGG + chr3.1:16750773-16750792 None:intergenic 20.0%
!! GATATTCTCTTTATCAATTA+TGG + chr3.1:16752181-16752200 None:intergenic 20.0%
!!! TGAATGTAATTTTTGTTTTC+AGG - chr3.1:16752487-16752506 MS.gene79409:intron 20.0%
!!! TTTTATAGCAAGGATAATTA+TGG - chr3.1:16751249-16751268 MS.gene79409:CDS 20.0%
! AAAAAAGTTTGTAAGATGAC+AGG + chr3.1:16752394-16752413 None:intergenic 25.0%
! AAAGTTGACAAAAAAAGAAG+TGG + chr3.1:16751611-16751630 None:intergenic 25.0%
! AATGTTCAATGGAATCAATT+GGG + chr3.1:16751567-16751586 None:intergenic 25.0%
! AATTATTTATCAGTGTCTAC+GGG + chr3.1:16750772-16750791 None:intergenic 25.0%
! ACAATGCATAATATATGCAA+AGG + chr3.1:16752109-16752128 None:intergenic 25.0%
! ATAAGATTCGATTCACAATT+TGG - chr3.1:16751742-16751761 MS.gene79409:CDS 25.0%
! ATTAATTATATAGGCAGTAC+TGG + chr3.1:16752158-16752177 None:intergenic 25.0%
! CAGTTAAAATTGTCATTATC+AGG - chr3.1:16752283-16752302 MS.gene79409:intron 25.0%
! TATGGAAACAATGCAAATTA+TGG - chr3.1:16752827-16752846 MS.gene79409:intron 25.0%
! TATGGTAACAATGTGAATTA+TGG - chr3.1:16753262-16753281 MS.gene79409:intron 25.0%
! TGCTATGATAAATCCATATT+GGG - chr3.1:16750933-16750952 MS.gene79409:CDS 25.0%
! TGGGATTCATTATAGTTAAT+CGG + chr3.1:16751548-16751567 None:intergenic 25.0%
! TTAATTATATAGGCAGTACT+GGG + chr3.1:16752157-16752176 None:intergenic 25.0%
! TTAATTGGCATTTGTAACAA+CGG - chr3.1:16752432-16752451 MS.gene79409:intron 25.0%
! TTATTGTTCCTTCATTTGAT+AGG - chr3.1:16752229-16752248 MS.gene79409:intron 25.0%
!! TCTCTAGTGTGTATTTATTT+TGG - chr3.1:16751487-16751506 MS.gene79409:CDS 25.0%
!!! ATCTCATTGTTTTTATAGCA+AGG - chr3.1:16751239-16751258 MS.gene79409:CDS 25.0%
!!! CTGATAATGACAATTTTAAC+TGG + chr3.1:16752285-16752304 None:intergenic 25.0%
AAACAATGCAAATTATGGTG+CGG - chr3.1:16752832-16752851 MS.gene79409:intron 30.0%
AGCATTTGTATATGTGTACA+TGG + chr3.1:16751811-16751830 None:intergenic 30.0%
AGTGATAACCATTATAGTAC+CGG - chr3.1:16753625-16753644 MS.gene79409:intron 30.0%
ATTCAAATTGAAGACGTGTT+TGG + chr3.1:16750861-16750880 None:intergenic 30.0%
ATTCTATATCACACATGGTA+TGG + chr3.1:16752132-16752151 None:intergenic 30.0%
ATTTCTTGTAAAACCACGAT+AGG - chr3.1:16750908-16750927 MS.gene79409:CDS 30.0%
CAATGTTCAATGGAATCAAT+TGG + chr3.1:16751568-16751587 None:intergenic 30.0%
CTGCTATGATAAATCCATAT+TGG - chr3.1:16750932-16750951 MS.gene79409:CDS 30.0%
GAAAGCAATTCTGTTAACTA+CGG - chr3.1:16753379-16753398 MS.gene79409:intron 30.0%
GAAAGCAATTCTGTTAACTA+TGG - chr3.1:16753379-16753398 MS.gene79409:intron 30.0%
GGGATTCATTATAGTTAATC+GGG + chr3.1:16751547-16751566 None:intergenic 30.0%
GTAAAAGCTCGACAATTATA+AGG + chr3.1:16751958-16751977 None:intergenic 30.0%
TAAGCTTACACAATGTTCAA+TGG + chr3.1:16751578-16751597 None:intergenic 30.0%
TACAAATGCTGAAACTACAT+AGG - chr3.1:16751821-16751840 MS.gene79409:intron 30.0%
TATACATACGAGTTGTATCT+CGG - chr3.1:16751432-16751451 MS.gene79409:CDS 30.0%
TATGGAAACACTGCAAATTA+TGG - chr3.1:16753088-16753107 MS.gene79409:intron 30.0%
TATGGAAACACTTACAATGA+TGG - chr3.1:16752698-16752717 MS.gene79409:intron 30.0%
TGAAAATTAGGACCTTTGTT+GGG - chr3.1:16750677-16750696 MS.gene79409:CDS 30.0%
TGCTACTGTCAATATTAGTT+TGG - chr3.1:16752003-16752022 MS.gene79409:intron 30.0%
TTGAAAATTAGGACCTTTGT+TGG - chr3.1:16750676-16750695 MS.gene79409:CDS 30.0%
TTGAACGTAACTATATGTGT+TGG - chr3.1:16750809-16750828 MS.gene79409:CDS 30.0%
TTGAGAAACATATCGTGAAT+CGG + chr3.1:16751780-16751799 None:intergenic 30.0%
! GCTACTGTCAATATTAGTTT+GGG - chr3.1:16752004-16752023 MS.gene79409:intron 30.0%
! TGTTACTTACAATACTGTTG+AGG - chr3.1:16751306-16751325 MS.gene79409:CDS 30.0%
! TGTTTTCTTTTTCCCTTCTA+GGG - chr3.1:16751145-16751164 MS.gene79409:CDS 30.0%
!!! AAGTTGATGCTTTTGCTAAA+CGG - chr3.1:16753824-16753843 MS.gene79409:CDS 30.0%
!!! TTATTTTTTTTGGTAGTGGC+CGG - chr3.1:16752068-16752087 MS.gene79409:intron 30.0%
AAAATTAGGACCTTTGTTGG+GGG - chr3.1:16750679-16750698 MS.gene79409:CDS 35.0%
ACGTCTTCAATTTGAATTGC+CGG - chr3.1:16750864-16750883 MS.gene79409:CDS 35.0%
ACTTATGTGTCTAATCATCC+AGG - chr3.1:16751976-16751995 MS.gene79409:intron 35.0%
AGCTCACAAACTTCATTCAA+TGG + chr3.1:16751851-16751870 None:intergenic 35.0%
AGTAACAAAGCCAAATCCTT+TGG + chr3.1:16751293-16751312 None:intergenic 35.0%
ATAAAGATCCTATCTTGGCA+TGG + chr3.1:16750981-16751000 None:intergenic 35.0%
ATAATATATGCAAAGGTCCG+GGG + chr3.1:16752102-16752121 None:intergenic 35.0%
ATAATTATGGATCGCGAAAC+TGG - chr3.1:16751262-16751281 MS.gene79409:CDS 35.0%
ATGCAAATTCATGTGTTTGC+AGG - chr3.1:16751036-16751055 MS.gene79409:CDS 35.0%
ATGCCAAGATAGGATCTTTA+TGG - chr3.1:16750980-16750999 MS.gene79409:CDS 35.0%
CAACCATAAAGATCCTATCT+TGG + chr3.1:16750986-16751005 None:intergenic 35.0%
CATAATATATGCAAAGGTCC+GGG + chr3.1:16752103-16752122 None:intergenic 35.0%
CATCACAGTTAAGTTACTGA+AGG + chr3.1:16752339-16752358 None:intergenic 35.0%
CTCGACAATTATAAGGACAA+GGG + chr3.1:16751951-16751970 None:intergenic 35.0%
GAAAATTAGGACCTTTGTTG+GGG - chr3.1:16750678-16750697 MS.gene79409:CDS 35.0%
GAAAGCAATGCTGTTAACTA+TGG - chr3.1:16752782-16752801 MS.gene79409:intron 35.0%
GCATAATATATGCAAAGGTC+CGG + chr3.1:16752104-16752123 None:intergenic 35.0%
GGGAAATTCTATATCACACA+TGG + chr3.1:16752137-16752156 None:intergenic 35.0%
GGTGCTAACAATGCAAATTA+TGG - chr3.1:16753430-16753449 MS.gene79409:intron 35.0%
GGTTATGGTAACTCTTCATA+CGG - chr3.1:16752611-16752630 MS.gene79409:intron 35.0%
GTAGAGTTGGGAGTTTATTA+AGG - chr3.1:16750480-16750499 MS.gene79409:CDS 35.0%
TACTTACAATACTGTTGAGG+AGG - chr3.1:16751309-16751328 MS.gene79409:CDS 35.0%
TGGCAAAATTTACACCAACT+CGG + chr3.1:16752526-16752545 None:intergenic 35.0%
TGTACGTGTATGCAATCATT+CGG + chr3.1:16751394-16751413 None:intergenic 35.0%
! CTGTTTTCTTTTTCCCTTCT+AGG - chr3.1:16751144-16751163 MS.gene79409:CDS 35.0%
! GTTTTCTTTTTCCCTTCTAG+GGG - chr3.1:16751146-16751165 MS.gene79409:CDS 35.0%
! TTTTCTTTTTCCCTTCTAGG+GGG - chr3.1:16751147-16751166 MS.gene79409:CDS 35.0%
!! AGTTGATGCTTTTGCTAAAC+GGG - chr3.1:16753825-16753844 MS.gene79409:CDS 35.0%
!!! AATTTTAACTGGAGACCACA+TGG + chr3.1:16752274-16752293 None:intergenic 35.0%
!!! AGCGATGCTTTTTCAAGATA+TGG - chr3.1:16751090-16751109 MS.gene79409:CDS 35.0%
!!! TTTTGTTTTCAGGATCTGCA+TGG - chr3.1:16752497-16752516 MS.gene79409:intron 35.0%
AATAACAGCATGCAACGACA+AGG + chr3.1:16752214-16752233 None:intergenic 40.0%
AATACCAAGCTGTTTGTAGG+AGG - chr3.1:16750593-16750612 MS.gene79409:CDS 40.0%
AGATATGGCCAAGTTCTTGA+CGG - chr3.1:16751105-16751124 MS.gene79409:CDS 40.0%
ATGGCTTTCTTTGGTAGAGT+TGG - chr3.1:16750467-16750486 MS.gene79409:CDS 40.0%
CAGATGAGCCTATCAAATGA+AGG + chr3.1:16752240-16752259 None:intergenic 40.0%
CCTACAAACAGCTTGGTATT+GGG + chr3.1:16750593-16750612 None:intergenic 40.0%
GCAAATTATGGTACTGCTGT+AGG - chr3.1:16753442-16753461 MS.gene79409:intron 40.0%
GCTCGACAATTATAAGGACA+AGG + chr3.1:16751952-16751971 None:intergenic 40.0%
GGTGGAAACGATGCAAATTA+TGG - chr3.1:16752740-16752759 MS.gene79409:intron 40.0%
GGTGGTAACAGTGCAAATTA+TGG - chr3.1:16753337-16753356 MS.gene79409:intron 40.0%
GTTAACTATGGTATTGCTCC+TGG - chr3.1:16753565-16753584 MS.gene79409:intron 40.0%
TATGATAGAACTGGAGGACT+TGG - chr3.1:16753757-16753776 MS.gene79409:CDS 40.0%
TATGGTAACTCTTCATACGG+TGG - chr3.1:16752614-16752633 MS.gene79409:intron 40.0%
TATTGACAGTAGCAGTAACC+TGG + chr3.1:16751997-16752016 None:intergenic 40.0%
TCCTACAAACAGCTTGGTAT+TGG + chr3.1:16750594-16750613 None:intergenic 40.0%
TCTGTGAGAAGATATCCATG+TGG - chr3.1:16752256-16752275 MS.gene79409:intron 40.0%
TGGCTTTCTTTGGTAGAGTT+GGG - chr3.1:16750468-16750487 MS.gene79409:CDS 40.0%
TTATCATAGCAGACCTATCG+TGG + chr3.1:16750924-16750943 None:intergenic 40.0%
! CATCTGTTTTCCAAGCCATA+CGG - chr3.1:16750552-16750571 MS.gene79409:CDS 40.0%
! GATAACCATTATAGTACCGG+TGG - chr3.1:16753628-16753647 MS.gene79409:intron 40.0%
! GTATGGCTTGGAAAACAGAT+GGG + chr3.1:16750553-16750572 None:intergenic 40.0%
! TACAATGATGGAACTACCAG+TGG - chr3.1:16752710-16752729 MS.gene79409:intron 40.0%
! TATGGCTTGGAAAACAGATG+GGG + chr3.1:16750552-16750571 None:intergenic 40.0%
!! ACTTCCAGGGTATTGATTAC+GGG + chr3.1:16753683-16753702 None:intergenic 40.0%
!! CACTTCCAGGGTATTGATTA+CGG + chr3.1:16753684-16753703 None:intergenic 40.0%
!! TTGAAGACGTGTTTGGTGTT+TGG + chr3.1:16750854-16750873 None:intergenic 40.0%
!! TTTCTTTTTCCCTTCTAGGG+GGG - chr3.1:16751148-16751167 MS.gene79409:CDS 40.0%
AAACAGGGGCAAACCCAATA+TGG + chr3.1:16750949-16750968 None:intergenic 45.0%
AACAGTGCCAATTACAGTGG+TGG - chr3.1:16753529-16753548 MS.gene79409:intron 45.0%
AAGGTCCATCAAAACCACCA+CGG + chr3.1:16752559-16752578 None:intergenic 45.0%
AATTATGGTGCAGCTGTAGG+TGG - chr3.1:16753352-16753371 MS.gene79409:intron 45.0%
ACAACTCACCGTCAAGAACT+TGG + chr3.1:16751116-16751135 None:intergenic 45.0%
ACTACACAGCTATGTAGCAC+CGG + chr3.1:16750886-16750905 None:intergenic 45.0%
ACTGGTAGGTCCAAAGGATT+TGG - chr3.1:16751280-16751299 MS.gene79409:CDS 45.0%
AGAACTGGAGGACTTGGATA+CGG - chr3.1:16753763-16753782 MS.gene79409:CDS 45.0%
ATTACGGGAGAAACCATTGC+TGG + chr3.1:16753668-16753687 None:intergenic 45.0%
CAACACCACCGGTACTATAA+TGG + chr3.1:16753636-16753655 None:intergenic 45.0%
CCCAATACCAAGCTGTTTGT+AGG - chr3.1:16750590-16750609 MS.gene79409:CDS 45.0%
GCAAATTATGGTGCAGCTGT+AGG - chr3.1:16753349-16753368 MS.gene79409:intron 45.0%
GCAACACATTCACCAGACAT+TGG - chr3.1:16750740-16750759 MS.gene79409:CDS 45.0%
GCTGCTGATACTGCTAACTA+TGG - chr3.1:16753286-16753305 MS.gene79409:intron 45.0%
GCTTTCTCCACCACTGTAAT+TGG + chr3.1:16753539-16753558 None:intergenic 45.0%
GGTAACAGTGCCAATTACAG+TGG - chr3.1:16753526-16753545 MS.gene79409:intron 45.0%
GGTGGATATGATAGAACTGG+AGG - chr3.1:16753751-16753770 MS.gene79409:CDS 45.0%
GGTGGATATTCAGGTGGTTA+TGG - chr3.1:16752596-16752615 MS.gene79409:intron 45.0%
GTAACTCTTCATACGGTGGT+GGG - chr3.1:16752618-16752637 MS.gene79409:intron 45.0%
GTTAACTATGGTAGTCCTCC+TGG - chr3.1:16752794-16752813 MS.gene79409:intron 45.0%
TATACCCTGTTGCACTTCCA+GGG + chr3.1:16753696-16753715 None:intergenic 45.0%
TTACCATAACCACCAACACC+AGG + chr3.1:16753250-16753269 None:intergenic 45.0%
TTACGGGAGAAACCATTGCT+GGG + chr3.1:16753667-16753686 None:intergenic 45.0%
TTATGGATCGCGAAACTGGT+AGG - chr3.1:16751266-16751285 MS.gene79409:CDS 45.0%
TTCTCCCGTAATCAATACCC+TGG - chr3.1:16753676-16753695 MS.gene79409:intron 45.0%
TTTCCATAACCACCAACACC+AGG + chr3.1:16752815-16752834 None:intergenic 45.0%
! AATACCCTGGAAGTGCAACA+GGG - chr3.1:16753689-16753708 MS.gene79409:intron 45.0%
! AATGATGGAACTACCAGTGG+TGG - chr3.1:16752713-16752732 MS.gene79409:intron 45.0%
! CATGGCAGGGTTTAAAACAG+GGG + chr3.1:16750963-16750982 None:intergenic 45.0%
! CGTATGGCTTGGAAAACAGA+TGG + chr3.1:16750554-16750573 None:intergenic 45.0%
! GCATGGCAGGGTTTAAAACA+GGG + chr3.1:16750964-16750983 None:intergenic 45.0%
! GCTGGTGGATATGATAGAAC+TGG - chr3.1:16753748-16753767 MS.gene79409:CDS 45.0%
! GTTAACTATGGTAGTGCACC+TGG - chr3.1:16753484-16753503 MS.gene79409:intron 45.0%
! GTTAACTATGGTAGTGCTCC+TGG - chr3.1:16752881-16752900 MS.gene79409:intron 45.0%
! TATAGTGGTAATGCTGCTGG+AGG - chr3.1:16752659-16752678 MS.gene79409:intron 45.0%
! TTTGATGGACCTTATGGTGG+TGG - chr3.1:16752566-16752585 MS.gene79409:intron 45.0%
!! AATTATGGTGCTGCTGTAGG+CGG - chr3.1:16752755-16752774 MS.gene79409:intron 45.0%
!! CATTATAGTACCGGTGGTGT+TGG - chr3.1:16753634-16753653 MS.gene79409:intron 45.0%
!! GCAAATTATGGTGCTGCTGT+AGG - chr3.1:16752752-16752771 MS.gene79409:intron 45.0%
!! GGTTTTGATGGACCTTATGG+TGG - chr3.1:16752563-16752582 MS.gene79409:intron 45.0%
!!! GGTGGTTTTGATGGACCTTA+TGG - chr3.1:16752560-16752579 MS.gene79409:intron 45.0%
AAACCCTGCCATGCCAAGAT+AGG - chr3.1:16750970-16750989 MS.gene79409:CDS 50.0%
AATGCTGCTGGAGGTTATGG+CGG - chr3.1:16752668-16752687 MS.gene79409:intron 50.0%
AATTATGGTGCGGCTGTAGG+CGG - chr3.1:16752929-16752948 MS.gene79409:intron 50.0%
ACTACCAGTGGTGGTTATGG+TGG - chr3.1:16752722-16752741 MS.gene79409:intron 50.0%
ACTGTGAGAACCCCCAACAA+AGG + chr3.1:16750692-16750711 None:intergenic 50.0%
AGATCCTATCTTGGCATGGC+AGG + chr3.1:16750977-16750996 None:intergenic 50.0%
AGGTCCATCAAAACCACCAC+GGG + chr3.1:16752558-16752577 None:intergenic 50.0%
AGTGCAACAGGGTATAGCAG+TGG - chr3.1:16753700-16753719 MS.gene79409:intron 50.0%
CAACTGAATCCCCCCTAGAA+GGG + chr3.1:16751160-16751179 None:intergenic 50.0%
CTATACCCTGTTGCACTTCC+AGG + chr3.1:16753697-16753716 None:intergenic 50.0%
CTCACCTCCTACAAACAGCT+TGG + chr3.1:16750600-16750619 None:intergenic 50.0%
CTGAGTTACCTGTCCATCCA+AGG + chr3.1:16751353-16751372 None:intergenic 50.0%
GATCCTATCTTGGCATGGCA+GGG + chr3.1:16750976-16750995 None:intergenic 50.0%
GCAAATTATGGTGCGGCTGT+AGG - chr3.1:16752926-16752945 MS.gene79409:intron 50.0%
GCTCCTGTTGCTGGTGTTTA+CGG - chr3.1:16753406-16753425 MS.gene79409:intron 50.0%
GGAACTACCAGTGGTGGTTA+TGG - chr3.1:16752719-16752738 MS.gene79409:intron 50.0%
GGACTTGGATACGGTGAAAG+TGG - chr3.1:16753772-16753791 MS.gene79409:CDS 50.0%
GGTAACTCTTCATACGGTGG+TGG - chr3.1:16752617-16752636 MS.gene79409:intron 50.0%
GGTAATGCTGCTGGAGGTTA+TGG - chr3.1:16752665-16752684 MS.gene79409:intron 50.0%
GTCTGGTGAATGTGTTGCGT+CGG + chr3.1:16750738-16750757 None:intergenic 50.0%
GTTTCCACCATAACCACCAC+TGG + chr3.1:16752729-16752748 None:intergenic 50.0%
TATGGTAGTCCTCCTGGTGT+TGG - chr3.1:16752800-16752819 MS.gene79409:intron 50.0%
TATGGTATTGCTCCTGGTGC+TGG - chr3.1:16753571-16753590 MS.gene79409:intron 50.0%
TCAACTGAATCCCCCCTAGA+AGG + chr3.1:16751161-16751180 None:intergenic 50.0%
TTTGCCAATGAAAGACCCCG+TGG - chr3.1:16752539-16752558 MS.gene79409:intron 50.0%
! ATCAAGTGCCATTCAGGCCT+TGG - chr3.1:16751333-16751352 MS.gene79409:CDS 50.0%
! CAATACCCTGGAAGTGCAAC+AGG - chr3.1:16753688-16753707 MS.gene79409:intron 50.0%
! GGCATGGCAGGGTTTAAAAC+AGG + chr3.1:16750965-16750984 None:intergenic 50.0%
! GGCTATAGTGGTAATGCTGC+TGG - chr3.1:16752656-16752675 MS.gene79409:intron 50.0%
! GGTAATGCTGCTGGCTATAG+TGG - chr3.1:16752644-16752663 MS.gene79409:intron 50.0%
! TATGGTAGTGCACCTGGTGT+TGG - chr3.1:16753490-16753509 MS.gene79409:intron 50.0%
! TATGGTAGTGCTCCTGGTGT+TGG - chr3.1:16752887-16752906 MS.gene79409:intron 50.0%
!! ATAGTACCGGTGGTGTTGGT+GGG - chr3.1:16753638-16753657 MS.gene79409:intron 50.0%
!! TACGGGTTAGTGCCAATGTC+TGG + chr3.1:16750755-16750774 None:intergenic 50.0%
!! TATAGTACCGGTGGTGTTGG+TGG - chr3.1:16753637-16753656 MS.gene79409:intron 50.0%
!! TATGGTGCTGCTGCTGGATT+TGG - chr3.1:16753598-16753617 MS.gene79409:intron 50.0%
!! TCTTCATACGGTGGTGGGTA+TGG - chr3.1:16752623-16752642 MS.gene79409:intron 50.0%
AAGGTCCGGGGTTCGAATTC+CGG + chr3.1:16752090-16752109 None:intergenic 55.0%
ACCACCACGGGGTCTTTCAT+TGG + chr3.1:16752546-16752565 None:intergenic 55.0%
CAAGCCATACGGTGCTTCTC+GGG - chr3.1:16750563-16750582 MS.gene79409:CDS 55.0%
CATTCAGGCCTTGGATGGAC+AGG - chr3.1:16751342-16751361 MS.gene79409:CDS 55.0%
CCAAGCCATACGGTGCTTCT+CGG - chr3.1:16750562-16750581 MS.gene79409:CDS 55.0%
CCACCATAACCACCAACACC+AGG + chr3.1:16753505-16753524 None:intergenic 55.0%
CCACCGTAAACACCAGCAAC+AGG + chr3.1:16753412-16753431 None:intergenic 55.0%
CCATAACCACCAACACCAGG+AGG + chr3.1:16752812-16752831 None:intergenic 55.0%
CCTGTTGCTGGTGTTTACGG+TGG - chr3.1:16753409-16753428 MS.gene79409:intron 55.0%
CGCGAAACTGGTAGGTCCAA+AGG - chr3.1:16751274-16751293 MS.gene79409:CDS 55.0%
CTAGGGGGGATTCAGTTGAG+AGG - chr3.1:16751162-16751181 MS.gene79409:CDS 55.0%
CTGTCCATCCAAGGCCTGAA+TGG + chr3.1:16751344-16751363 None:intergenic 55.0%
GCTAACTATGGCAGTGCTCC+TGG - chr3.1:16753298-16753317 MS.gene79409:intron 55.0%
GGTCCATCAAAACCACCACG+GGG + chr3.1:16752557-16752576 None:intergenic 55.0%
TACGGTAGTGCTCCTGTTGC+TGG - chr3.1:16753397-16753416 MS.gene79409:intron 55.0%
TATGGCAGTGCTCCTGGTGT+TGG - chr3.1:16753304-16753323 MS.gene79409:intron 55.0%
TATGGTGCAGCTGTAGGTGG+TGG - chr3.1:16753355-16753374 MS.gene79409:intron 55.0%
! AGTGCCATTCAGGCCTTGGA+TGG - chr3.1:16751337-16751356 MS.gene79409:CDS 55.0%
! GGTGGGTATGGTAATGCTGC+TGG - chr3.1:16752635-16752654 MS.gene79409:intron 55.0%
! GGTTATGGCGGAGGTGGTTA+TGG - chr3.1:16752680-16752699 MS.gene79409:intron 55.0%
!! AGTACCCGAGAAGCACCGTA+TGG + chr3.1:16750570-16750589 None:intergenic 55.0%
!! CCTCCTGGTGTTGGTGGTTA+TGG - chr3.1:16752809-16752828 MS.gene79409:intron 55.0%
!! CCTGGTGTTGGTGGTTATGG+TGG - chr3.1:16752812-16752831 MS.gene79409:intron 55.0%
!! GATGGACCTTATGGTGGTGG+AGG - chr3.1:16752569-16752588 MS.gene79409:intron 55.0%
!! GCACCTGGTGTTGGTGGTTA+TGG - chr3.1:16753499-16753518 MS.gene79409:intron 55.0%
!! GCTCCTGGTGTTGGTGGTTA+CGG - chr3.1:16752896-16752915 MS.gene79409:intron 55.0%
!! GCTCCTGGTGTTGGTGGTTA+TGG - chr3.1:16752896-16752915 MS.gene79409:intron 55.0%
!! GGAGGCATCAAGTGCCATTC+AGG - chr3.1:16751327-16751346 MS.gene79409:CDS 55.0%
!! GGAGGTGGTGGTGGATATTC+AGG - chr3.1:16752587-16752606 MS.gene79409:intron 55.0%
!! GGTGGTGGTGGATATTCAGG+TGG - chr3.1:16752590-16752609 MS.gene79409:intron 55.0%
!! GGTGTTGGTGGTTATGGTGG+TGG - chr3.1:16753505-16753524 MS.gene79409:intron 55.0%
!! TAGTACCGGTGGTGTTGGTG+GGG - chr3.1:16753639-16753658 MS.gene79409:intron 55.0%
!!! AGACCCCGTGGTGGTTTTGA+TGG - chr3.1:16752551-16752570 MS.gene79409:intron 55.0%
AGCAGTGGCAGTTCAGCTCC+CGG - chr3.1:16753715-16753734 MS.gene79409:CDS 60.0%
AGTGGCCGGAATTCGAACCC+CGG - chr3.1:16752082-16752101 MS.gene79409:intron 60.0%
CCACCACCTCCACCACCATA+AGG + chr3.1:16752578-16752597 None:intergenic 60.0%
CCACCGTAACCACCAACACC+AGG + chr3.1:16753319-16753338 None:intergenic 60.0%
GATCTGCATGGTCGCCGAGT+TGG - chr3.1:16752509-16752528 MS.gene79409:intron 60.0%
GCACCATAACCACCAGCACC+AGG + chr3.1:16753586-16753605 None:intergenic 60.0%
GCCAATGAAAGACCCCGTGG+TGG - chr3.1:16752542-16752561 MS.gene79409:intron 60.0%
TCCACCAGCAAAGCTGCTCC+CGG + chr3.1:16753737-16753756 None:intergenic 60.0%
! GGTAGTCCTCCTGGTGTTGG+TGG - chr3.1:16752803-16752822 MS.gene79409:intron 60.0%
! GGTAGTGCACCTGGTGTTGG+TGG - chr3.1:16753493-16753512 MS.gene79409:intron 60.0%
! GGTAGTGCTCCTGGTGTTGG+TGG - chr3.1:16752890-16752909 MS.gene79409:intron 60.0%
! GGTATTGCTCCTGGTGCTGG+TGG - chr3.1:16753574-16753593 MS.gene79409:intron 60.0%
!! AGTACCGGTGGTGTTGGTGG+GGG - chr3.1:16753640-16753659 MS.gene79409:intron 60.0%
!! CCGAGAAGCACCGTATGGCT+TGG + chr3.1:16750565-16750584 None:intergenic 60.0%
!! CCTGGTGTTGGTGGTTACGG+TGG - chr3.1:16753316-16753335 MS.gene79409:intron 60.0%
!! CCTTATGGTGGTGGAGGTGG+TGG - chr3.1:16752575-16752594 MS.gene79409:intron 60.0%
!! GCTCCTGGTGCTGGTGGTTA+TGG - chr3.1:16753580-16753599 MS.gene79409:intron 60.0%
!! GGACCTTATGGTGGTGGAGG+TGG - chr3.1:16752572-16752591 MS.gene79409:intron 60.0%
!! GGTGGTTATGGTGCTGCTGC+TGG - chr3.1:16753592-16753611 MS.gene79409:intron 60.0%
!! GGTGTTGGTGGTTACGGTGG+TGG - chr3.1:16753319-16753338 MS.gene79409:intron 60.0%
!! TATGGTGCTGCTGTAGGCGG+TGG - chr3.1:16752758-16752777 MS.gene79409:intron 60.0%
!! TATGGTGGTGGAGGTGGTGG+TGG - chr3.1:16752578-16752597 MS.gene79409:intron 60.0%
CCACCAGCAAAGCTGCTCCC+GGG + chr3.1:16753736-16753755 None:intergenic 65.0%
GCAGTGGCAGTTCAGCTCCC+GGG - chr3.1:16753716-16753735 MS.gene79409:CDS 65.0%
GCTGCTGGAGGTTATGGCGG+AGG - chr3.1:16752671-16752690 MS.gene79409:intron 65.0%
TATGGTGCGGCTGTAGGCGG+TGG - chr3.1:16752932-16752951 MS.gene79409:intron 65.0%
! GCTGGAGGTTATGGCGGAGG+TGG - chr3.1:16752674-16752693 MS.gene79409:intron 65.0%
! GGCAGTGCTCCTGGTGTTGG+TGG - chr3.1:16753307-16753326 MS.gene79409:intron 65.0%
! GTTGGTGGGGGTCCCAGCAA+TGG - chr3.1:16753652-16753671 MS.gene79409:intron 65.0%
CCCGGGAGCAGCTTTGCTGG+TGG - chr3.1:16753733-16753752 MS.gene79409:CDS 70.0%
GCTCCCGGGAGCAGCTTTGC+TGG - chr3.1:16753730-16753749 MS.gene79409:CDS 70.0%
GGGACCCCCACCAACACCAC+CGG + chr3.1:16753647-16753666 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 16750467 16753852 16750467 ID=MS.gene79409
chr3.1 mRNA 16750467 16753852 16750467 ID=MS.gene79409.t1;Parent=MS.gene79409
chr3.1 exon 16753705 16753852 16753705 ID=MS.gene79409.t1.exon1;Parent=MS.gene79409.t1
chr3.1 CDS 16753705 16753852 16753705 ID=cds.MS.gene79409.t1;Parent=MS.gene79409.t1
chr3.1 exon 16753193 16753261 16753193 ID=MS.gene79409.t1.exon2;Parent=MS.gene79409.t1
chr3.1 CDS 16753193 16753261 16753193 ID=cds.MS.gene79409.t1;Parent=MS.gene79409.t1
chr3.1 exon 16752956 16753062 16752956 ID=MS.gene79409.t1.exon3;Parent=MS.gene79409.t1
chr3.1 CDS 16752956 16753062 16752956 ID=cds.MS.gene79409.t1;Parent=MS.gene79409.t1
chr3.1 exon 16750467 16751810 16750467 ID=MS.gene79409.t1.exon4;Parent=MS.gene79409.t1
chr3.1 CDS 16750467 16751810 16750467 ID=cds.MS.gene79409.t1;Parent=MS.gene79409.t1
Gene Sequence

>MS.gene79409

ATGGCTTTCTTTGGTAGAGTTGGGAGTTTATTAAGGAATGCAGCAAATACGAAGATCACTTCTGAGTTGAAGTTACGTTCTTCCCCATCTGTTTTCCAAGCCATACGGTGCTTCTCGGGTACTCCCAATACCAAGCTGTTTGTAGGAGGTGAGTTTTAATTACAATCTACTCTAATTTGCAAACACATGATGTCTATTTTTCATATATATTGAAAATTAGGACCTTTGTTGGGGGTTCTCACAGTTCAAGTTATGAAGCTATGAAGCACCGACGCAACACATTCACCAGACATTGGCACTAACCCGTAGACACTGATAAATAATTTTAGACAATAGAAGTGATTGAACGTAACTATATGTGTTGGTATTGAACACTTACACGTGCCAAACACCAAACACGTCTTCAATTTGAATTGCCGGTGCTACATAGCTGTGTAGTCAATTTCTTGTAAAACCACGATAGGTCTGCTATGATAAATCCATATTGGGTTTGCCCCTGTTTTAAACCCTGCCATGCCAAGATAGGATCTTTATGGTTGAAAATGCTAATAATTATTAAAAATGAATTCATGCAAATTCATGTGTTTGCAGGTATTTCGTATAATACTGATGAACAAAGTTTGAGCGATGCTTTTTCAAGATATGGCCAAGTTCTTGACGGTGAGTTGTCAGATTATCTGTTTTCTTTTTCCCTTCTAGGGGGGATTCAGTTGAGAGGCTGTTTAAACTAAAGTCACTTGTGTTAATTGAATTCAATATTAATTGCTGTTTAATCTCATTGTTTTTATAGCAAGGATAATTATGGATCGCGAAACTGGTAGGTCCAAAGGATTTGGCTTTGTTACTTACAATACTGTTGAGGAGGCATCAAGTGCCATTCAGGCCTTGGATGGACAGGTAACTCAGATTATTAGTAATGAACTGCCGAATGATTGCATACACGTACATGATTATCAGTATATTACTATACATACGAGTTGTATCTCGGTTCGATACAAAATTGAACTCAATCAATATGAATCTCTAGTGTGTATTTATTTTGGACATGTCATTGAATCATGATTCATTATGTTGAATCCCGATTAACTATAATGAATCCCAATTGATTCCATTGAACATTGTGTAAGCTTAGCGTAGTCAGCCACTTCTTTTTTTGTCAACTTTGTATAGTTAGTCGCTTTTCTTTTGTTATTTGATTTCAACTAGAATTTAGCTATATCACATGTTTTTACTTAAAAATATCATTTTTATTAGTAATATATCTTACGATTCATAATAAGATTCGATTCACAATTTGGAAAATAGTTTTTCCGATTCACGATATGTTTCTCAATTCGATAACCATGTACACATATACAAATGCTGAAACTACATAGGTAAGCCATTGAATGAAGTTTGTGAGCTGTACTTAAATGCAAATTTCGTGTGCTTTTACAGTTAGTGCTTGTGTCTGAATTTGTTGAGTGTTATTGCTTTTTTGTCCCTTGTCCTTATAATTGTCGAGCTTTTACTTATGTGTCTAATCATCCAGGTTACTGCTACTGTCAATATTAGTTTGGGTTTGATTATGATGATTGTCATGAATTAGTGTTGTCTAATTATTATTTTTTTTGGTAGTGGCCGGAATTCGAACCCCGGACCTTTGCATATATTATGCATTGTCCATACCATGTGTGATATAGAATTTCCCAGTACTGCCTATATAATTAATCCATAATTGATAAAGAGAATATCATGTCATCATCCTTGTCGTTGCATGCTGTTATTGTTCCTTCATTTGATAGGCTCATCTGTGAGAAGATATCCATGTGGTCTCCAGTTAAAATTGTCATTATCAGGAACTTTTAACACGTGTGTTTTACTTGCAAACCTTCAGTAACTTAACTGTGATGATATAAACTAGTTTACAACTTCACAAGTGATACCTGTCATCTTACAAACTTTTTTTTTATACTTCATGTTAATTTAATTGGCATTTGTAACAACGGACAATATTACTTTTACCTTTCTTATTTATTTATGAATGTAATTTTTGTTTTCAGGATCTGCATGGTCGCCGAGTTGGTGTAAATTTTGCCAATGAAAGACCCCGTGGTGGTTTTGATGGACCTTATGGTGGTGGAGGTGGTGGTGGATATTCAGGTGGTTATGGTAACTCTTCATACGGTGGTGGGTATGGTAATGCTGCTGGCTATAGTGGTAATGCTGCTGGAGGTTATGGCGGAGGTGGTTATGGAAACACTTACAATGATGGAACTACCAGTGGTGGTTATGGTGGAAACGATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTCCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCGGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCGGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTCCTCCTGGTGTTGGTGGTTATGGAAACACTGCAAATTATGGTGCTGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGAAACAATGCAAATTATGGTGCGGCTGTAGGCGGTGGTGAAAGCAATGCTGTTAACTATGGTAGTGCTCCTGGTGTTGGTGGTTATGGTAACAATGTGAATTATGGTGCTGCTGATACTGCTAACTATGGCAGTGCTCCTGGTGTTGGTGGTTACGGTGGTGGTAACAGTGCAAATTATGGTGCAGCTGTAGGTGGTGGAGAAAGCAATTCTGTTAACTACGGTAGTGCTCCTGTTGCTGGTGTTTACGGTGGTGCTAACAATGCAAATTATGGTACTGCTGTAGGTGCTAGAGAAAGCAATTCTGTTAACTATGGTAGTGCACCTGGTGTTGGTGGTTATGGTGGTGGTAACAGTGCCAATTACAGTGGTGGAGAAAGCAATTCTGTTAACTATGGTATTGCTCCTGGTGCTGGTGGTTATGGTGCTGCTGCTGGATTTGGCAAGAGTGATAACCATTATAGTACCGGTGGTGTTGGTGGGGGTCCCAGCAATGGTTTCTCCCGTAATCAATACCCTGGAAGTGCAACAGGGTATAGCAGTGGCAGTTCAGCTCCCGGGAGCAGCTTTGCTGGTGGATATGATAGAACTGGAGGACTTGGATACGGTGAAAGTGGTCAAGAAGATTGCAAGAACGATGATCATGAAGTTGATGCTTTTGCTAAACGGGCTTGA
Protein sequence

>MS.gene79409.t1

MAFFGRVGSLLRNAANTKITSELKLRSSPSVFQAIRCFSGTPNTKLFVGGISYNTDEQSLSDAFSRYGQVLDARIIMDRETGRSKGFGFVTYNTVEEASSAIQALDGQDLHGRRVGVNFANERPRGGFDGPYGGGGGGGYSGGYGNSSYGGGYGNAAGYSGNAAGGYGGGGYGNTYNDGTTSGGYGGNDANYGAAVGGGESNAVNYGSPPGVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNANYGAAVGGGESNAVNYGSPPGVGGYGNTANYGAAVGGGESNAVNYGSAPGVGGYGNNANYGAAVGGGESNAVNYGSAPGVGGYGNNVNYGAADTANYGSAPGVGGYGGGNSANYGAAVGGGESNSVNYGSAPVAGVYGGANNANYGTAVGARESNSVNYGSAPGVGGYGGGNSANYSGGESNSVNYGIAPGAGGYGAAAGFGKSDNHYSTGGVGGGPSNGFSRNQYPGSATGYSSGSSAPGSSFAGGYDRTGGLGYGESGQEDCKNDDHEVDAFAKRA