Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79525.t1 | XP_013454727.1 | 88.7 | 476 | 40 | 2 | 7 | 471 | 49 | 521 | 2.30E-229 | 805.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79525.t1 | Q9SEX2 | 72.6 | 475 | 123 | 3 | 7 | 474 | 44 | 518 | 1.9e-187 | 657.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79525.t1 | A0A072UI08 | 88.7 | 476 | 40 | 2 | 7 | 471 | 49 | 521 | 1.6e-229 | 805.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene79525 | MS.gene038038 | PPI |
MS.gene05876 | MS.gene79525 | PPI |
MS.gene79525 | MS.gene58365 | PPI |
MS.gene79525 | MS.gene71874 | PPI |
MS.gene53517 | MS.gene79525 | PPI |
MS.gene060688 | MS.gene79525 | PPI |
MS.gene79525 | MS.gene71248 | PPI |
MS.gene79525 | MS.gene068635 | PPI |
MS.gene79525 | MS.gene059032 | PPI |
MS.gene79525 | MS.gene049080 | PPI |
MS.gene79525 | MS.gene027846 | PPI |
MS.gene79525 | MS.gene060690 | PPI |
MS.gene069168 | MS.gene79525 | PPI |
MS.gene015797 | MS.gene79525 | PPI |
MS.gene79525 | MS.gene053443 | PPI |
MS.gene05950 | MS.gene79525 | PPI |
MS.gene015792 | MS.gene79525 | PPI |
MS.gene79525 | MS.gene073888 | PPI |
MS.gene79525 | MS.gene94817 | PPI |
MS.gene027844 | MS.gene79525 | PPI |
MS.gene79525 | MS.gene059767 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79525.t1 | MTR_4g011810 | 94.080 | 473 | 20 | 1 | 7 | 471 | 49 | 521 | 0.0 | 878 |
MS.gene79525.t1 | MTR_4g096870 | 48.929 | 280 | 133 | 4 | 177 | 454 | 104 | 375 | 2.08e-86 | 275 |
MS.gene79525.t1 | MTR_2g086160 | 42.154 | 325 | 153 | 5 | 175 | 471 | 112 | 429 | 1.94e-80 | 260 |
MS.gene79525.t1 | MTR_4g053350 | 41.772 | 316 | 152 | 4 | 181 | 471 | 116 | 424 | 8.78e-80 | 258 |
MS.gene79525.t1 | MTR_4g053350 | 41.772 | 316 | 152 | 4 | 181 | 471 | 116 | 424 | 1.21e-79 | 258 |
MS.gene79525.t1 | MTR_2g086160 | 50.000 | 242 | 109 | 4 | 175 | 412 | 112 | 345 | 1.45e-77 | 250 |
MS.gene79525.t1 | MTR_6g023875 | 41.667 | 300 | 162 | 4 | 174 | 471 | 364 | 652 | 1.17e-72 | 246 |
MS.gene79525.t1 | MTR_6g023855 | 40.864 | 301 | 162 | 6 | 175 | 471 | 229 | 517 | 5.60e-70 | 235 |
MS.gene79525.t1 | MTR_7g075520 | 47.082 | 257 | 118 | 5 | 171 | 421 | 191 | 435 | 8.05e-67 | 226 |
MS.gene79525.t1 | MTR_7g018380 | 71.875 | 160 | 17 | 1 | 474 | 605 | 524 | 683 | 6.77e-64 | 223 |
MS.gene79525.t1 | MTR_8g075040 | 71.875 | 160 | 17 | 1 | 474 | 605 | 575 | 734 | 2.21e-63 | 223 |
MS.gene79525.t1 | MTR_1g066620 | 70.000 | 160 | 20 | 1 | 474 | 605 | 370 | 529 | 2.43e-62 | 216 |
MS.gene79525.t1 | MTR_1g088750 | 40.196 | 306 | 166 | 5 | 176 | 470 | 872 | 1171 | 8.00e-62 | 222 |
MS.gene79525.t1 | MTR_1g088750 | 40.196 | 306 | 166 | 5 | 176 | 470 | 921 | 1220 | 9.92e-62 | 222 |
MS.gene79525.t1 | MTR_8g099065 | 39.130 | 322 | 158 | 7 | 173 | 462 | 514 | 829 | 1.95e-61 | 219 |
MS.gene79525.t1 | MTR_1g088730 | 41.611 | 298 | 157 | 6 | 176 | 462 | 915 | 1206 | 6.18e-61 | 219 |
MS.gene79525.t1 | MTR_5g009840 | 38.110 | 328 | 189 | 6 | 99 | 424 | 428 | 743 | 1.39e-60 | 216 |
MS.gene79525.t1 | MTR_6g023865 | 34.677 | 372 | 183 | 9 | 141 | 471 | 90 | 442 | 1.43e-60 | 209 |
MS.gene79525.t1 | MTR_6g033740 | 43.750 | 256 | 135 | 4 | 171 | 424 | 478 | 726 | 3.37e-59 | 212 |
MS.gene79525.t1 | MTR_3g089100 | 45.614 | 228 | 116 | 2 | 191 | 416 | 896 | 1117 | 2.41e-58 | 212 |
MS.gene79525.t1 | MTR_1g099480 | 41.264 | 269 | 146 | 5 | 159 | 424 | 436 | 695 | 2.88e-58 | 209 |
MS.gene79525.t1 | MTR_3g089100 | 45.614 | 228 | 116 | 2 | 191 | 416 | 901 | 1122 | 2.93e-58 | 212 |
MS.gene79525.t1 | MTR_3g089100 | 45.614 | 228 | 116 | 2 | 191 | 416 | 930 | 1151 | 3.21e-58 | 212 |
MS.gene79525.t1 | MTR_1g101870 | 42.063 | 252 | 136 | 4 | 173 | 421 | 485 | 729 | 2.28e-55 | 201 |
MS.gene79525.t1 | MTR_1g101870 | 42.063 | 252 | 136 | 4 | 173 | 421 | 537 | 781 | 2.54e-55 | 201 |
MS.gene79525.t1 | MTR_1g063380 | 39.073 | 302 | 161 | 7 | 183 | 470 | 469 | 761 | 6.28e-54 | 197 |
MS.gene79525.t1 | MTR_1g063380 | 41.949 | 236 | 125 | 4 | 192 | 424 | 205 | 431 | 2.16e-45 | 172 |
MS.gene79525.t1 | MTR_7g101870 | 38.079 | 302 | 163 | 6 | 183 | 470 | 470 | 761 | 1.73e-53 | 196 |
MS.gene79525.t1 | MTR_7g101870 | 41.525 | 236 | 126 | 4 | 192 | 424 | 206 | 432 | 6.36e-45 | 171 |
MS.gene79525.t1 | MTR_1g099470 | 41.700 | 247 | 133 | 5 | 173 | 416 | 414 | 652 | 2.76e-53 | 194 |
MS.gene79525.t1 | MTR_2g095210 | 38.079 | 302 | 164 | 6 | 183 | 470 | 397 | 689 | 3.47e-53 | 194 |
MS.gene79525.t1 | MTR_2g095210 | 41.121 | 107 | 59 | 2 | 172 | 274 | 184 | 290 | 1.89e-14 | 77.0 |
MS.gene79525.t1 | MTR_7g089040 | 39.542 | 306 | 153 | 6 | 170 | 471 | 663 | 940 | 3.25e-50 | 187 |
MS.gene79525.t1 | MTR_7g089040 | 35.135 | 222 | 131 | 6 | 229 | 447 | 422 | 633 | 1.84e-25 | 112 |
MS.gene79525.t1 | MTR_3g092070 | 37.358 | 265 | 151 | 5 | 192 | 454 | 81 | 332 | 3.20e-48 | 173 |
MS.gene79525.t1 | MTR_3g092080 | 38.491 | 265 | 148 | 6 | 192 | 454 | 84 | 335 | 6.31e-48 | 171 |
MS.gene79525.t1 | MTR_3g092080 | 38.491 | 265 | 148 | 6 | 192 | 454 | 84 | 335 | 1.10e-47 | 172 |
MS.gene79525.t1 | MTR_3g092070 | 38.462 | 247 | 143 | 4 | 192 | 436 | 81 | 320 | 1.49e-47 | 170 |
MS.gene79525.t1 | MTR_1g099480 | 44.231 | 208 | 105 | 4 | 159 | 363 | 436 | 635 | 3.41e-47 | 176 |
MS.gene79525.t1 | MTR_8g099065 | 46.114 | 193 | 96 | 4 | 173 | 363 | 514 | 700 | 6.68e-47 | 176 |
MS.gene79525.t1 | MTR_4g074920 | 37.818 | 275 | 140 | 6 | 191 | 462 | 668 | 914 | 3.03e-46 | 176 |
MS.gene79525.t1 | MTR_7g088830 | 42.975 | 242 | 126 | 4 | 183 | 420 | 649 | 882 | 5.91e-46 | 175 |
MS.gene79525.t1 | MTR_7g088830 | 30.496 | 282 | 175 | 9 | 169 | 442 | 370 | 638 | 2.36e-22 | 102 |
MS.gene79525.t1 | MTR_4g094270 | 37.367 | 281 | 142 | 7 | 186 | 459 | 150 | 403 | 8.94e-46 | 167 |
MS.gene79525.t1 | MTR_3g117230 | 39.453 | 256 | 132 | 9 | 174 | 421 | 125 | 365 | 9.49e-46 | 167 |
MS.gene79525.t1 | MTR_6g023845 | 32.099 | 324 | 153 | 8 | 169 | 471 | 82 | 359 | 1.11e-45 | 166 |
MS.gene79525.t1 | MTR_3g112260 | 39.453 | 256 | 132 | 9 | 174 | 421 | 122 | 362 | 1.44e-45 | 166 |
MS.gene79525.t1 | MTR_2g095320 | 36.458 | 288 | 153 | 6 | 190 | 466 | 419 | 687 | 1.98e-45 | 172 |
MS.gene79525.t1 | MTR_2g095320 | 38.610 | 259 | 140 | 6 | 172 | 424 | 130 | 375 | 1.07e-40 | 158 |
MS.gene79525.t1 | MTR_1g083330 | 39.344 | 244 | 131 | 6 | 186 | 422 | 161 | 394 | 4.64e-42 | 157 |
MS.gene79525.t1 | MTR_4g033235 | 39.344 | 244 | 131 | 6 | 186 | 422 | 162 | 395 | 5.66e-42 | 157 |
MS.gene79525.t1 | MTR_7g099640 | 36.923 | 260 | 150 | 5 | 186 | 440 | 181 | 431 | 4.59e-41 | 155 |
MS.gene79525.t1 | MTR_1g069105 | 36.538 | 260 | 151 | 5 | 186 | 440 | 182 | 432 | 4.67e-41 | 155 |
MS.gene79525.t1 | MTR_7g099640 | 37.860 | 243 | 138 | 4 | 186 | 423 | 181 | 415 | 1.08e-40 | 153 |
MS.gene79525.t1 | MTR_7g089290 | 34.965 | 286 | 172 | 6 | 190 | 470 | 637 | 913 | 2.11e-40 | 158 |
MS.gene79525.t1 | MTR_7g089290 | 34.965 | 286 | 172 | 6 | 190 | 470 | 665 | 941 | 2.46e-40 | 158 |
MS.gene79525.t1 | MTR_2g438140 | 37.698 | 252 | 143 | 5 | 186 | 432 | 220 | 462 | 6.58e-39 | 152 |
MS.gene79525.t1 | MTR_2g438140 | 37.698 | 252 | 143 | 5 | 186 | 432 | 280 | 522 | 1.07e-38 | 152 |
MS.gene79525.t1 | MTR_3g115110 | 37.743 | 257 | 136 | 7 | 191 | 441 | 248 | 486 | 1.17e-38 | 152 |
MS.gene79525.t1 | MTR_2g007010 | 32.993 | 294 | 178 | 6 | 183 | 471 | 519 | 798 | 1.67e-38 | 152 |
MS.gene79525.t1 | MTR_2g007010 | 32.639 | 288 | 168 | 8 | 191 | 460 | 237 | 516 | 3.76e-34 | 139 |
MS.gene79525.t1 | MTR_7g088850 | 36.100 | 241 | 139 | 5 | 190 | 424 | 280 | 511 | 3.43e-38 | 149 |
MS.gene79525.t1 | MTR_7g088850 | 29.258 | 229 | 147 | 7 | 199 | 422 | 24 | 242 | 2.45e-13 | 73.2 |
MS.gene79525.t1 | MTR_3g062510 | 31.293 | 294 | 189 | 4 | 134 | 422 | 101 | 386 | 3.51e-38 | 146 |
MS.gene79525.t1 | MTR_7g010800 | 37.154 | 253 | 143 | 7 | 186 | 432 | 200 | 442 | 2.37e-37 | 147 |
MS.gene79525.t1 | MTR_4g094662 | 37.549 | 253 | 142 | 6 | 186 | 432 | 223 | 465 | 3.39e-37 | 147 |
MS.gene79525.t1 | MTR_1g095660 | 36.398 | 261 | 139 | 9 | 174 | 421 | 104 | 350 | 1.43e-36 | 141 |
MS.gene79525.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 125 | 365 | 2.69e-36 | 140 |
MS.gene79525.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 207 | 447 | 1.46e-35 | 140 |
MS.gene79525.t1 | MTR_7g088980 | 34.911 | 169 | 96 | 6 | 260 | 422 | 18 | 178 | 2.95e-11 | 66.6 |
MS.gene79525.t1 | MTR_2g101290 | 36.742 | 264 | 146 | 7 | 164 | 421 | 392 | 640 | 1.80e-35 | 142 |
MS.gene79525.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 275 | 515 | 1.98e-35 | 140 |
MS.gene79525.t1 | MTR_7g088980 | 36.441 | 236 | 133 | 9 | 195 | 422 | 20 | 246 | 1.26e-25 | 111 |
MS.gene79525.t1 | MTR_2g101290 | 36.742 | 264 | 146 | 7 | 164 | 421 | 392 | 640 | 3.14e-35 | 142 |
MS.gene79525.t1 | MTR_7g088980 | 35.200 | 250 | 147 | 5 | 181 | 424 | 301 | 541 | 3.30e-35 | 140 |
MS.gene79525.t1 | MTR_7g088980 | 35.681 | 213 | 123 | 6 | 216 | 422 | 68 | 272 | 4.35e-23 | 103 |
MS.gene79525.t1 | MTR_7g096060 | 38.039 | 255 | 133 | 8 | 192 | 434 | 240 | 481 | 4.54e-35 | 141 |
MS.gene79525.t1 | MTR_3g104480 | 37.269 | 271 | 143 | 10 | 183 | 447 | 215 | 464 | 4.80e-35 | 141 |
MS.gene79525.t1 | MTR_3g104470 | 36.466 | 266 | 146 | 9 | 186 | 447 | 220 | 466 | 5.51e-35 | 141 |
MS.gene79525.t1 | MTR_7g078570 | 37.698 | 252 | 138 | 7 | 192 | 434 | 192 | 433 | 2.37e-34 | 138 |
MS.gene79525.t1 | MTR_2g078630 | 33.333 | 267 | 146 | 7 | 181 | 424 | 41 | 298 | 3.45e-34 | 139 |
MS.gene79525.t1 | MTR_2g078630 | 33.333 | 267 | 146 | 7 | 181 | 424 | 569 | 826 | 5.91e-34 | 139 |
MS.gene79525.t1 | MTR_3g023900 | 30.671 | 313 | 178 | 7 | 181 | 472 | 520 | 814 | 8.61e-34 | 137 |
MS.gene79525.t1 | MTR_3g023900 | 33.562 | 292 | 171 | 8 | 191 | 462 | 233 | 521 | 2.94e-31 | 130 |
MS.gene79525.t1 | MTR_4g067100 | 36.032 | 247 | 140 | 6 | 186 | 423 | 374 | 611 | 1.03e-33 | 138 |
MS.gene79525.t1 | MTR_4g067100 | 36.032 | 247 | 140 | 6 | 186 | 423 | 374 | 611 | 1.11e-33 | 138 |
MS.gene79525.t1 | MTR_6g016600 | 37.349 | 249 | 141 | 6 | 189 | 432 | 314 | 552 | 8.38e-33 | 134 |
MS.gene79525.t1 | MTR_1g069105 | 38.614 | 202 | 111 | 4 | 186 | 382 | 182 | 375 | 1.59e-32 | 130 |
MS.gene79525.t1 | MTR_5g069780 | 36.039 | 308 | 155 | 10 | 192 | 490 | 313 | 587 | 1.82e-32 | 134 |
MS.gene79525.t1 | MTR_4g064350 | 33.974 | 312 | 164 | 11 | 188 | 490 | 316 | 594 | 2.71e-32 | 133 |
MS.gene79525.t1 | MTR_1g028390 | 35.793 | 271 | 152 | 8 | 181 | 447 | 318 | 570 | 3.91e-32 | 132 |
MS.gene79525.t1 | MTR_3g062510 | 35.124 | 242 | 144 | 4 | 134 | 370 | 101 | 334 | 4.34e-32 | 128 |
MS.gene79525.t1 | MTR_0376s0020 | 35.857 | 251 | 143 | 7 | 192 | 434 | 1 | 241 | 1.27e-31 | 129 |
MS.gene79525.t1 | MTR_6g059690 | 36.111 | 252 | 142 | 7 | 192 | 434 | 197 | 438 | 1.48e-31 | 130 |
MS.gene79525.t1 | MTR_5g075340 | 35.019 | 257 | 145 | 8 | 169 | 421 | 213 | 451 | 2.64e-31 | 130 |
MS.gene79525.t1 | MTR_3g462930 | 35.065 | 308 | 158 | 10 | 192 | 490 | 304 | 578 | 1.32e-30 | 128 |
MS.gene79525.t1 | MTR_2g024440 | 34.413 | 247 | 140 | 5 | 192 | 428 | 214 | 448 | 3.78e-30 | 124 |
MS.gene79525.t1 | MTR_2g024440 | 34.413 | 247 | 140 | 5 | 192 | 428 | 296 | 530 | 4.04e-30 | 125 |
MS.gene79525.t1 | MTR_2g024440 | 34.413 | 247 | 140 | 5 | 192 | 428 | 297 | 531 | 4.26e-30 | 125 |
MS.gene79525.t1 | MTR_3g023890 | 30.745 | 322 | 178 | 8 | 181 | 479 | 374 | 673 | 7.62e-29 | 122 |
MS.gene79525.t1 | MTR_3g023890 | 30.952 | 294 | 166 | 11 | 194 | 462 | 94 | 375 | 1.43e-23 | 105 |
MS.gene79525.t1 | MTR_8g023550 | 32.549 | 255 | 136 | 8 | 174 | 421 | 151 | 376 | 3.84e-27 | 114 |
MS.gene79525.t1 | MTR_8g099605 | 30.345 | 290 | 155 | 8 | 151 | 423 | 139 | 398 | 7.58e-27 | 116 |
MS.gene79525.t1 | MTR_8g099605 | 30.345 | 290 | 155 | 8 | 151 | 423 | 380 | 639 | 8.48e-27 | 116 |
MS.gene79525.t1 | MTR_3g096000 | 35.409 | 257 | 146 | 7 | 187 | 432 | 291 | 538 | 9.62e-27 | 116 |
MS.gene79525.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 12 | 234 | 2.90e-26 | 112 |
MS.gene79525.t1 | MTR_3g104490 | 35.088 | 228 | 115 | 7 | 192 | 417 | 207 | 403 | 5.37e-26 | 113 |
MS.gene79525.t1 | MTR_7g088980 | 36.441 | 236 | 133 | 9 | 195 | 422 | 20 | 246 | 7.63e-26 | 112 |
MS.gene79525.t1 | MTR_7g088980 | 29.435 | 248 | 121 | 6 | 181 | 424 | 275 | 472 | 1.58e-21 | 99.0 |
MS.gene79525.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 188 | 410 | 8.22e-26 | 112 |
MS.gene79525.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 62 | 284 | 9.22e-26 | 111 |
MS.gene79525.t1 | MTR_8g469460 | 35.965 | 228 | 105 | 7 | 192 | 417 | 207 | 395 | 1.09e-25 | 112 |
MS.gene79525.t1 | MTR_5g075360 | 35.593 | 236 | 135 | 8 | 186 | 417 | 238 | 460 | 1.75e-25 | 112 |
MS.gene79525.t1 | MTR_2g095440 | 36.667 | 150 | 71 | 2 | 474 | 599 | 356 | 505 | 1.92e-24 | 107 |
MS.gene79525.t1 | MTR_4g057795 | 38.000 | 150 | 69 | 2 | 474 | 599 | 300 | 449 | 2.02e-24 | 107 |
MS.gene79525.t1 | MTR_2g095440 | 36.667 | 150 | 71 | 2 | 474 | 599 | 350 | 499 | 2.16e-24 | 107 |
MS.gene79525.t1 | MTR_2g095440 | 36.667 | 150 | 71 | 2 | 474 | 599 | 410 | 559 | 2.51e-24 | 107 |
MS.gene79525.t1 | MTR_4g057795 | 38.000 | 150 | 69 | 2 | 474 | 599 | 410 | 559 | 5.67e-24 | 106 |
MS.gene79525.t1 | MTR_7g088980 | 35.211 | 213 | 124 | 6 | 216 | 422 | 68 | 272 | 3.10e-23 | 104 |
MS.gene79525.t1 | MTR_7g088980 | 29.435 | 248 | 121 | 6 | 181 | 424 | 301 | 498 | 2.33e-21 | 98.6 |
MS.gene79525.t1 | MTR_3g080970 | 38.000 | 150 | 69 | 2 | 474 | 599 | 538 | 687 | 4.81e-23 | 104 |
MS.gene79525.t1 | MTR_4g088885 | 32.584 | 267 | 142 | 11 | 223 | 468 | 256 | 505 | 1.41e-22 | 102 |
MS.gene79525.t1 | MTR_8g056860 | 29.545 | 220 | 147 | 5 | 206 | 421 | 484 | 699 | 1.37e-21 | 100 |
MS.gene79525.t1 | MTR_1g044600 | 32.973 | 185 | 109 | 4 | 257 | 434 | 193 | 369 | 1.31e-18 | 89.7 |
MS.gene79525.t1 | MTR_5g074850 | 32.653 | 196 | 120 | 5 | 229 | 421 | 542 | 728 | 2.06e-18 | 90.1 |
MS.gene79525.t1 | MTR_6g005760 | 27.488 | 211 | 117 | 6 | 227 | 412 | 362 | 561 | 6.86e-14 | 75.1 |
MS.gene79525.t1 | MTR_6g005760 | 27.488 | 211 | 117 | 6 | 227 | 412 | 234 | 433 | 8.26e-14 | 74.3 |
MS.gene79525.t1 | MTR_5g020530 | 27.830 | 212 | 112 | 7 | 227 | 411 | 387 | 584 | 3.89e-13 | 72.8 |
MS.gene79525.t1 | MTR_3g076930 | 30.412 | 194 | 109 | 5 | 204 | 379 | 171 | 356 | 7.79e-13 | 71.2 |
MS.gene79525.t1 | MTR_4g083460 | 27.200 | 250 | 112 | 8 | 194 | 421 | 839 | 1040 | 2.43e-12 | 70.9 |
MS.gene79525.t1 | MTR_4g077880 | 25.943 | 212 | 120 | 6 | 227 | 412 | 368 | 568 | 2.21e-11 | 67.0 |
MS.gene79525.t1 | MTR_4g112600 | 43.038 | 79 | 43 | 2 | 195 | 271 | 3 | 81 | 4.41e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79525.t1 | AT1G80350 | 78.826 | 477 | 90 | 5 | 7 | 474 | 44 | 518 | 0.0 | 759 |
MS.gene79525.t1 | AT2G34560 | 49.110 | 281 | 132 | 5 | 177 | 454 | 85 | 357 | 1.96e-88 | 280 |
MS.gene79525.t1 | AT2G34560 | 49.110 | 281 | 132 | 5 | 177 | 454 | 94 | 366 | 2.20e-88 | 280 |
MS.gene79525.t1 | AT2G27600 | 40.506 | 316 | 156 | 3 | 181 | 471 | 118 | 426 | 4.03e-77 | 251 |
MS.gene79525.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 62 | 346 | 1.46e-72 | 237 |
MS.gene79525.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 62 | 346 | 1.46e-72 | 237 |
MS.gene79525.t1 | AT3G27120 | 41.472 | 299 | 162 | 4 | 174 | 470 | 382 | 669 | 1.26e-71 | 244 |
MS.gene79525.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 195 | 479 | 5.84e-71 | 237 |
MS.gene79525.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 199 | 483 | 6.32e-71 | 237 |
MS.gene79525.t1 | AT2G45500 | 43.046 | 302 | 151 | 6 | 174 | 471 | 205 | 489 | 1.03e-70 | 236 |
MS.gene79525.t1 | AT3G19740 | 40.876 | 274 | 151 | 4 | 191 | 462 | 700 | 964 | 5.73e-62 | 222 |
MS.gene79525.t1 | AT4G28000 | 44.314 | 255 | 133 | 5 | 172 | 424 | 496 | 743 | 1.13e-61 | 219 |
MS.gene79525.t1 | AT3G54540 | 69.375 | 160 | 21 | 1 | 474 | 605 | 532 | 691 | 1.14e-61 | 218 |
MS.gene79525.t1 | AT3G54540 | 69.375 | 160 | 21 | 1 | 474 | 605 | 532 | 691 | 1.14e-61 | 218 |
MS.gene79525.t1 | AT4G28000 | 44.314 | 255 | 133 | 5 | 172 | 424 | 494 | 741 | 2.37e-61 | 218 |
MS.gene79525.t1 | AT4G28000 | 44.314 | 255 | 133 | 5 | 172 | 424 | 496 | 743 | 2.52e-61 | 218 |
MS.gene79525.t1 | AT4G02480 | 45.902 | 244 | 123 | 3 | 176 | 416 | 943 | 1180 | 1.34e-60 | 219 |
MS.gene79525.t1 | AT1G50140 | 45.175 | 228 | 117 | 3 | 191 | 416 | 688 | 909 | 6.12e-60 | 216 |
MS.gene79525.t1 | AT1G50140 | 45.175 | 228 | 117 | 3 | 191 | 416 | 688 | 909 | 6.12e-60 | 216 |
MS.gene79525.t1 | AT1G50140 | 45.175 | 228 | 117 | 3 | 191 | 416 | 710 | 931 | 7.12e-60 | 216 |
MS.gene79525.t1 | AT1G50140 | 45.175 | 228 | 117 | 3 | 191 | 416 | 710 | 931 | 7.12e-60 | 216 |
MS.gene79525.t1 | AT1G50140 | 45.175 | 228 | 117 | 3 | 191 | 416 | 710 | 931 | 7.12e-60 | 216 |
MS.gene79525.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 495 | 796 | 7.40e-60 | 214 |
MS.gene79525.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 495 | 796 | 7.40e-60 | 214 |
MS.gene79525.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 497 | 798 | 7.41e-60 | 214 |
MS.gene79525.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 497 | 798 | 7.41e-60 | 214 |
MS.gene79525.t1 | AT1G02890 | 41.611 | 298 | 157 | 6 | 176 | 462 | 924 | 1215 | 7.43e-60 | 216 |
MS.gene79525.t1 | AT5G52882 | 44.094 | 254 | 133 | 5 | 173 | 424 | 494 | 740 | 7.56e-60 | 214 |
MS.gene79525.t1 | AT1G64110 | 39.610 | 308 | 163 | 6 | 172 | 462 | 492 | 793 | 7.92e-60 | 214 |
MS.gene79525.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 778 | 1034 | 2.66e-56 | 206 |
MS.gene79525.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 801 | 1057 | 2.74e-56 | 206 |
MS.gene79525.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 803 | 1059 | 2.91e-56 | 206 |
MS.gene79525.t1 | AT4G24860 | 39.544 | 263 | 151 | 3 | 180 | 440 | 805 | 1061 | 3.27e-56 | 206 |
MS.gene79525.t1 | AT5G03340 | 38.614 | 303 | 161 | 6 | 183 | 470 | 468 | 760 | 6.20e-54 | 197 |
MS.gene79525.t1 | AT5G03340 | 40.154 | 259 | 140 | 5 | 172 | 424 | 181 | 430 | 8.09e-45 | 171 |
MS.gene79525.t1 | AT3G09840 | 37.542 | 301 | 167 | 6 | 183 | 470 | 468 | 760 | 1.54e-51 | 190 |
MS.gene79525.t1 | AT3G09840 | 40.154 | 259 | 140 | 5 | 172 | 424 | 181 | 430 | 6.12e-45 | 171 |
MS.gene79525.t1 | AT3G53230 | 38.796 | 299 | 164 | 5 | 183 | 470 | 469 | 759 | 8.21e-51 | 188 |
MS.gene79525.t1 | AT3G53230 | 40.541 | 259 | 139 | 5 | 172 | 424 | 182 | 431 | 4.09e-45 | 172 |
MS.gene79525.t1 | AT4G27680 | 36.162 | 271 | 158 | 4 | 192 | 460 | 81 | 338 | 4.59e-49 | 176 |
MS.gene79525.t1 | AT3G56690 | 39.216 | 306 | 162 | 8 | 183 | 479 | 712 | 1002 | 6.84e-48 | 181 |
MS.gene79525.t1 | AT3G56690 | 36.161 | 224 | 126 | 6 | 226 | 446 | 416 | 625 | 5.97e-31 | 129 |
MS.gene79525.t1 | AT5G53540 | 35.424 | 271 | 160 | 5 | 192 | 460 | 84 | 341 | 3.58e-47 | 171 |
MS.gene79525.t1 | AT1G62130 | 41.949 | 236 | 113 | 6 | 191 | 424 | 742 | 955 | 1.00e-46 | 177 |
MS.gene79525.t1 | AT1G62130 | 41.949 | 236 | 113 | 6 | 191 | 424 | 749 | 962 | 1.27e-46 | 177 |
MS.gene79525.t1 | AT5G19990 | 38.868 | 265 | 141 | 7 | 186 | 438 | 94 | 349 | 3.98e-46 | 167 |
MS.gene79525.t1 | AT5G19990 | 38.868 | 265 | 141 | 7 | 186 | 438 | 152 | 407 | 8.31e-46 | 167 |
MS.gene79525.t1 | AT5G19990 | 38.868 | 265 | 141 | 7 | 186 | 438 | 152 | 407 | 8.31e-46 | 167 |
MS.gene79525.t1 | AT5G20000 | 38.868 | 265 | 141 | 7 | 186 | 438 | 152 | 407 | 1.51e-45 | 167 |
MS.gene79525.t1 | AT5G43010 | 38.672 | 256 | 134 | 9 | 174 | 421 | 122 | 362 | 6.32e-45 | 164 |
MS.gene79525.t1 | AT1G45000 | 38.672 | 256 | 134 | 9 | 174 | 421 | 122 | 362 | 1.33e-44 | 164 |
MS.gene79525.t1 | AT1G02890 | 36.577 | 298 | 144 | 7 | 176 | 462 | 924 | 1187 | 1.11e-43 | 168 |
MS.gene79525.t1 | AT1G03000 | 35.764 | 288 | 168 | 7 | 190 | 470 | 653 | 930 | 7.05e-43 | 166 |
MS.gene79525.t1 | AT3G05530 | 38.683 | 243 | 134 | 5 | 186 | 422 | 162 | 395 | 4.27e-42 | 157 |
MS.gene79525.t1 | AT1G09100 | 39.344 | 244 | 131 | 6 | 186 | 422 | 161 | 394 | 5.64e-42 | 157 |
MS.gene79525.t1 | AT2G20140 | 37.860 | 243 | 138 | 4 | 186 | 423 | 179 | 413 | 1.90e-41 | 156 |
MS.gene79525.t1 | AT4G29040 | 37.449 | 243 | 139 | 4 | 186 | 423 | 179 | 413 | 4.87e-41 | 155 |
MS.gene79525.t1 | AT1G53750 | 37.255 | 255 | 139 | 7 | 174 | 421 | 151 | 391 | 1.27e-39 | 150 |
MS.gene79525.t1 | AT1G50250 | 38.132 | 257 | 135 | 7 | 191 | 441 | 258 | 496 | 1.00e-38 | 152 |
MS.gene79525.t1 | AT5G42270 | 37.743 | 257 | 136 | 7 | 191 | 441 | 246 | 484 | 2.17e-38 | 151 |
MS.gene79525.t1 | AT5G58290 | 34.874 | 238 | 142 | 4 | 190 | 422 | 150 | 379 | 3.53e-38 | 146 |
MS.gene79525.t1 | AT2G03670 | 36.759 | 253 | 144 | 5 | 181 | 426 | 272 | 515 | 7.67e-38 | 148 |
MS.gene79525.t1 | AT2G03670 | 34.615 | 234 | 139 | 6 | 196 | 422 | 23 | 249 | 2.01e-28 | 120 |
MS.gene79525.t1 | AT5G15250 | 36.626 | 243 | 138 | 6 | 186 | 422 | 215 | 447 | 1.26e-37 | 149 |
MS.gene79525.t1 | AT2G26140 | 37.838 | 259 | 140 | 9 | 193 | 447 | 225 | 466 | 3.11e-36 | 145 |
MS.gene79525.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 218 | 450 | 4.22e-36 | 144 |
MS.gene79525.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 218 | 450 | 4.22e-36 | 144 |
MS.gene79525.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 218 | 450 | 4.22e-36 | 144 |
MS.gene79525.t1 | AT2G30950 | 37.037 | 243 | 137 | 6 | 186 | 422 | 222 | 454 | 4.64e-36 | 144 |
MS.gene79525.t1 | AT1G06430 | 37.349 | 249 | 137 | 7 | 186 | 428 | 211 | 446 | 4.73e-36 | 144 |
MS.gene79525.t1 | AT1G06430 | 37.349 | 249 | 137 | 7 | 186 | 428 | 211 | 446 | 4.73e-36 | 144 |
MS.gene79525.t1 | AT1G06430 | 37.349 | 249 | 137 | 7 | 186 | 428 | 211 | 446 | 4.73e-36 | 144 |
MS.gene79525.t1 | AT1G53780 | 31.902 | 326 | 184 | 10 | 108 | 423 | 270 | 567 | 6.73e-36 | 142 |
MS.gene79525.t1 | AT1G53780 | 31.902 | 326 | 184 | 10 | 108 | 423 | 270 | 567 | 6.73e-36 | 142 |
MS.gene79525.t1 | AT1G53780 | 31.902 | 326 | 184 | 10 | 108 | 423 | 269 | 566 | 7.26e-36 | 142 |
MS.gene79525.t1 | AT1G53780 | 31.902 | 326 | 184 | 10 | 108 | 423 | 291 | 588 | 8.01e-36 | 142 |
MS.gene79525.t1 | AT3G01610 | 32.353 | 340 | 194 | 9 | 156 | 474 | 473 | 797 | 1.09e-35 | 143 |
MS.gene79525.t1 | AT3G01610 | 33.106 | 293 | 179 | 5 | 186 | 462 | 224 | 515 | 2.57e-35 | 142 |
MS.gene79525.t1 | AT3G01610 | 32.353 | 340 | 194 | 9 | 156 | 474 | 473 | 797 | 1.44e-35 | 143 |
MS.gene79525.t1 | AT3G01610 | 33.106 | 293 | 179 | 5 | 186 | 462 | 224 | 515 | 2.93e-35 | 142 |
MS.gene79525.t1 | AT3G16290 | 36.742 | 264 | 146 | 7 | 164 | 421 | 384 | 632 | 1.21e-34 | 140 |
MS.gene79525.t1 | AT5G15250 | 33.835 | 266 | 137 | 7 | 186 | 422 | 215 | 470 | 3.03e-34 | 137 |
MS.gene79525.t1 | AT3G02450 | 37.751 | 249 | 140 | 6 | 189 | 432 | 328 | 566 | 1.27e-33 | 136 |
MS.gene79525.t1 | AT1G05910 | 32.288 | 319 | 189 | 9 | 114 | 423 | 309 | 609 | 3.20e-33 | 136 |
MS.gene79525.t1 | AT1G07510 | 33.117 | 308 | 164 | 9 | 192 | 490 | 324 | 598 | 4.86e-33 | 135 |
MS.gene79525.t1 | AT3G47060 | 36.039 | 308 | 155 | 11 | 192 | 490 | 322 | 596 | 6.89e-33 | 135 |
MS.gene79525.t1 | AT5G53170 | 37.450 | 251 | 140 | 8 | 194 | 440 | 361 | 598 | 1.17e-32 | 134 |
MS.gene79525.t1 | AT3G15120 | 34.454 | 238 | 138 | 6 | 194 | 422 | 718 | 946 | 1.97e-32 | 134 |
MS.gene79525.t1 | AT3G15120 | 34.454 | 238 | 138 | 6 | 194 | 422 | 728 | 956 | 1.98e-32 | 134 |
MS.gene79525.t1 | AT2G29080 | 33.876 | 307 | 162 | 9 | 192 | 490 | 319 | 592 | 2.30e-31 | 130 |
MS.gene79525.t1 | AT5G58870 | 34.314 | 306 | 163 | 8 | 192 | 490 | 326 | 600 | 3.28e-31 | 130 |
MS.gene79525.t1 | AT4G04180 | 34.894 | 235 | 129 | 6 | 192 | 415 | 316 | 537 | 6.80e-31 | 128 |
MS.gene79525.t1 | AT4G04180 | 34.894 | 235 | 129 | 6 | 192 | 415 | 311 | 532 | 9.34e-31 | 127 |
MS.gene79525.t1 | AT2G03670 | 34.615 | 234 | 139 | 6 | 196 | 422 | 23 | 249 | 3.47e-29 | 120 |
MS.gene79525.t1 | AT2G03670 | 39.241 | 158 | 90 | 3 | 181 | 333 | 272 | 428 | 1.34e-20 | 95.1 |
MS.gene79525.t1 | AT1G45000 | 41.420 | 169 | 86 | 6 | 174 | 336 | 122 | 283 | 7.76e-29 | 117 |
MS.gene79525.t1 | AT5G08470 | 32.911 | 237 | 141 | 5 | 194 | 424 | 843 | 1067 | 2.11e-28 | 121 |
MS.gene79525.t1 | AT5G08470 | 32.911 | 237 | 141 | 5 | 194 | 424 | 834 | 1058 | 2.34e-28 | 121 |
MS.gene79525.t1 | AT5G64580 | 35.019 | 257 | 147 | 7 | 187 | 432 | 308 | 555 | 2.22e-26 | 115 |
MS.gene79525.t1 | AT4G23940 | 33.465 | 254 | 139 | 7 | 186 | 422 | 421 | 661 | 3.32e-26 | 114 |
MS.gene79525.t1 | AT4G04910 | 32.584 | 267 | 142 | 12 | 223 | 468 | 246 | 495 | 1.21e-23 | 106 |
MS.gene79525.t1 | AT5G60790 | 37.333 | 150 | 70 | 2 | 474 | 599 | 415 | 564 | 6.31e-23 | 103 |
MS.gene79525.t1 | AT1G79560 | 31.313 | 198 | 128 | 5 | 229 | 422 | 527 | 720 | 1.12e-22 | 103 |
MS.gene79525.t1 | AT1G79560 | 31.313 | 198 | 128 | 5 | 229 | 422 | 527 | 720 | 1.53e-22 | 103 |
MS.gene79525.t1 | AT1G79560 | 31.313 | 198 | 128 | 5 | 229 | 422 | 527 | 720 | 1.60e-22 | 103 |
MS.gene79525.t1 | AT1G64550 | 37.931 | 145 | 66 | 2 | 474 | 594 | 539 | 683 | 1.77e-22 | 102 |
MS.gene79525.t1 | AT5G08470 | 37.226 | 137 | 78 | 3 | 194 | 326 | 843 | 975 | 1.95e-18 | 90.1 |
MS.gene79525.t1 | AT3G04340 | 40.385 | 156 | 73 | 7 | 211 | 358 | 799 | 942 | 2.52e-15 | 80.5 |
MS.gene79525.t1 | AT2G18330 | 25.229 | 218 | 120 | 6 | 227 | 412 | 384 | 590 | 7.87e-13 | 72.0 |
MS.gene79525.t1 | AT5G16930 | 26.415 | 212 | 119 | 7 | 227 | 412 | 397 | 597 | 3.08e-12 | 70.1 |
MS.gene79525.t1 | AT4G36580 | 25.581 | 215 | 120 | 6 | 227 | 412 | 381 | 584 | 4.33e-12 | 69.7 |
MS.gene79525.t1 | AT3G03060 | 29.114 | 158 | 100 | 4 | 227 | 383 | 385 | 531 | 3.64e-11 | 66.6 |
Find 170 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AATCTAATCAAGATAGTAAA+TGG | 0.183201 | 4.2:+88569344 | MS.gene79525:CDS |
TTATGTAAAAGCAGCCTTTC+TGG | 0.203295 | 4.2:+88572494 | MS.gene79525:intron |
ACTTGTTTCATCAGGGCTTC+TGG | 0.207403 | 4.2:+88570933 | MS.gene79525:intron |
AACGAAGATTTAGTAGAAAT+TGG | 0.208184 | 4.2:-88569193 | None:intergenic |
TCGTTACGACTCTCAAAATT+TGG | 0.227432 | 4.2:-88571271 | None:intergenic |
TCAAGCATTTCAGCCAATTC+AGG | 0.249762 | 4.2:-88570005 | None:intergenic |
AGCAACTGGATGCAGATAAA+AGG | 0.283997 | 4.2:+88569128 | MS.gene79525:CDS |
GAAGTAAGAAATTGAGAATA+GGG | 0.287624 | 4.2:+88572585 | MS.gene79525:CDS |
AAGCCGTTGTGCTTCCCTTA+TGG | 0.308493 | 4.2:+88570108 | MS.gene79525:CDS |
CTGCTACTTTAGCTTCTAAA+TGG | 0.310247 | 4.2:+88570576 | MS.gene79525:CDS |
TGAAAGCTCGGGTGGTATTC+AGG | 0.318013 | 4.2:+88572781 | MS.gene79525:CDS |
ACCCACTTGACCACCCCTTC+CGG | 0.318156 | 4.2:-88569314 | None:intergenic |
GATGCACCACCTTTCTTTAC+CGG | 0.324656 | 4.2:-88569464 | None:intergenic |
GTCCTTATGTTTGGTCCTCC+TGG | 0.327313 | 4.2:+88570485 | MS.gene79525:CDS |
TGGAAAGGTGTCCTTATGTT+TGG | 0.341007 | 4.2:+88570476 | MS.gene79525:CDS |
AGAAGTGTCTTTCCAGTTCC+AGG | 0.347867 | 4.2:-88570503 | None:intergenic |
AGAAGTAAGAAATTGAGAAT+AGG | 0.350711 | 4.2:+88572584 | MS.gene79525:CDS |
ATGGATGCCTGAATATTTCC+AGG | 0.363539 | 4.2:+88570127 | MS.gene79525:CDS |
CCCACTTGACCACCCCTTCC+GGG | 0.366495 | 4.2:-88569313 | None:intergenic |
AAGGTTACCTGGAAATATTC+AGG | 0.370724 | 4.2:-88570134 | None:intergenic |
GGTCTGGATGTAGCCGAAAA+AGG | 0.371302 | 4.2:-88572664 | None:intergenic |
ACCCTTCAATTCGTGCGAAA+TGG | 0.380693 | 4.2:+88569062 | MS.gene79525:CDS |
GAATGTTAAGAAAGCTCTTT+CGG | 0.384287 | 4.2:+88569087 | MS.gene79525:CDS |
ATGTTTGGTCCTCCTGGAAC+TGG | 0.386041 | 4.2:+88570491 | MS.gene79525:CDS |
GTAAAGAAAGGTGGTGCATC+TGG | 0.387564 | 4.2:+88569467 | MS.gene79525:CDS |
TGCATATCCAAATGATTTGT+GGG | 0.387983 | 4.2:-88572846 | None:intergenic |
CTTCCGCCTCATTCCATTCA+AGG | 0.388968 | 4.2:-88571984 | None:intergenic |
GAGAGCATGAATCGTCTAGA+AGG | 0.392329 | 4.2:+88570955 | MS.gene79525:CDS |
AACTGAAGTTGTAAAGCAAC+TGG | 0.394956 | 4.2:+88569114 | MS.gene79525:CDS |
AGATGAACCCACAAATCATT+TGG | 0.396989 | 4.2:+88572839 | MS.gene79525:CDS |
CGAAGGTCCTGACCCTGAAT+TGG | 0.398187 | 4.2:+88569992 | MS.gene79525:CDS |
GAACTTCTAGTTCAGGTTGA+TGG | 0.408367 | 4.2:+88570987 | MS.gene79525:CDS |
TGAAATTAAGAGTATGTCTA+AGG | 0.408663 | 4.2:+88572027 | MS.gene79525:CDS |
AAAATTGTACTTGGTGCATA+AGG | 0.409928 | 4.2:-88570647 | None:intergenic |
GAAGTCTGAACTTCTAGTTC+AGG | 0.421119 | 4.2:+88570980 | MS.gene79525:CDS |
TTAGTAGAAATTGGAGGAGA+CGG | 0.421242 | 4.2:-88569184 | None:intergenic |
TTACCAAGTCCCTCCTGGTC+TGG | 0.421538 | 4.2:-88572680 | None:intergenic |
GGGATCATCGAAGGGAGAAT+TGG | 0.428866 | 4.2:-88569251 | None:intergenic |
TGTCAGGAGGGCTGAAAGCT+CGG | 0.430458 | 4.2:+88572769 | MS.gene79525:intron |
TGTCGTGATGCTTCCTTGAA+TGG | 0.430475 | 4.2:+88571971 | MS.gene79525:CDS |
CAACAGTCTTCAAATTTATC+CGG | 0.432454 | 4.2:-88571300 | None:intergenic |
CGCCGGACTGATGGCTATAG+TGG | 0.434719 | 4.2:+88571929 | MS.gene79525:CDS |
GAGATATTCCCAACACTTTG+TGG | 0.436079 | 4.2:+88572607 | MS.gene79525:CDS |
GTCAGGAGGGCTGAAAGCTC+GGG | 0.439053 | 4.2:+88572770 | MS.gene79525:intron |
TCAAAATCACACATGGCAAC+AGG | 0.440279 | 4.2:-88572067 | None:intergenic |
GAAGTAGGATACTCATCTAA+TGG | 0.443032 | 4.2:-88569226 | None:intergenic |
ATCCATTTCGCACGAATTGA+AGG | 0.443588 | 4.2:-88569064 | None:intergenic |
TCTTTACCGGAGTTGATCCT+CGG | 0.447984 | 4.2:-88569451 | None:intergenic |
CCGAAAATTAGTAATGGTCT+TGG | 0.448313 | 4.2:+88571043 | MS.gene79525:CDS |
GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 4.2:-88572631 | None:intergenic |
GAAATATTCAGGCATCCATA+AGG | 0.458081 | 4.2:-88570123 | None:intergenic |
TCATCAATGAAAATTGTACT+TGG | 0.458381 | 4.2:-88570656 | None:intergenic |
GACGGAGGACGTCTTCCAAT+CGG | 0.458534 | 4.2:-88569166 | None:intergenic |
CTTGCTTACCAAGTCCCTCC+TGG | 0.460120 | 4.2:-88572685 | None:intergenic |
ATTTCAGCCAATTCAGGGTC+AGG | 0.462738 | 4.2:-88569999 | None:intergenic |
CAAGCATTTCAGCCAATTCA+GGG | 0.466679 | 4.2:-88570004 | None:intergenic |
GCAACTGGATGCAGATAAAA+GGG | 0.468454 | 4.2:+88569129 | MS.gene79525:CDS |
TTGCATATCCAAATGATTTG+TGG | 0.476672 | 4.2:-88572847 | None:intergenic |
TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 4.2:-88572615 | None:intergenic |
TGATGCATTGGCTGATCCGC+TGG | 0.481349 | 4.2:+88572875 | MS.gene79525:CDS |
ACGGAGGACGTCTTCCAATC+GGG | 0.481723 | 4.2:-88569165 | None:intergenic |
AATTGGCTGAAATGCTTGAA+AGG | 0.482451 | 4.2:+88570009 | MS.gene79525:CDS |
TGATTCTCTTTGCAACGCTA+GGG | 0.484042 | 4.2:+88570682 | MS.gene79525:CDS |
AGGCTGGTGGTGCTACTAGC+AGG | 0.485231 | 4.2:+88569416 | MS.gene79525:CDS |
TTGATTCTCTTTGCAACGCT+AGG | 0.487060 | 4.2:+88570681 | MS.gene79525:CDS |
GGAATGAGGCGGAAGATAGC+AGG | 0.488883 | 4.2:+88571992 | MS.gene79525:CDS |
CTAGGCGGCCTCCACATGTC+GGG | 0.490035 | 4.2:-88569271 | None:intergenic |
GTGAGATGGGATGATGTTGC+AGG | 0.493791 | 4.2:+88570056 | MS.gene79525:CDS |
TTCCAGGAGGACCAAACATA+AGG | 0.497922 | 4.2:-88570487 | None:intergenic |
TTCAGGGAATTAGAAGACCT+TGG | 0.498155 | 4.2:+88570456 | MS.gene79525:intron |
GAAGATTTAGTAGAAATTGG+AGG | 0.500738 | 4.2:-88569190 | None:intergenic |
ACCCGGAAGGGGTGGTCAAG+TGG | 0.503616 | 4.2:+88569312 | MS.gene79525:CDS |
TAGAATGGTGATGGTGAAGA+TGG | 0.504832 | 4.2:+88569948 | MS.gene79525:intron |
ATCTAATCAAGATAGTAAAT+GGG | 0.505265 | 4.2:+88569345 | MS.gene79525:CDS |
GATCCGCTGGATGAATTCAC+TGG | 0.507000 | 4.2:+88572888 | MS.gene79525:CDS |
TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 4.2:-88572616 | None:intergenic |
AATGTAATGCAGGAGAAGGC+TGG | 0.512666 | 4.2:+88571225 | MS.gene79525:intron |
AACCTCTCCTGGAGTGAGAT+GGG | 0.514638 | 4.2:+88570043 | MS.gene79525:CDS |
ACTGGTCGTGGCTCAAAGGC+TGG | 0.517485 | 4.2:+88569400 | MS.gene79525:CDS |
GATGTGTTAGAAACCTCTCC+TGG | 0.517926 | 4.2:+88570032 | MS.gene79525:CDS |
AGAGTCGTAACGAGTTGATC+CGG | 0.518492 | 4.2:+88571281 | MS.gene79525:CDS |
AAATATTCAGGCATCCATAA+GGG | 0.520528 | 4.2:-88570122 | None:intergenic |
CGACTCTCAAAATTTGGAAG+AGG | 0.521035 | 4.2:-88571265 | None:intergenic |
TCCATTTCGCACGAATTGAA+GGG | 0.527975 | 4.2:-88569063 | None:intergenic |
CTTCTACTAGTATCTCTACT+AGG | 0.529634 | 4.2:-88569289 | None:intergenic |
CATCCAGACCAGGAGGGACT+TGG | 0.530681 | 4.2:+88572677 | MS.gene79525:CDS |
TACTAGTAGAAGACCCGGAA+GGG | 0.533945 | 4.2:+88569300 | MS.gene79525:CDS |
AAACCTCTCCTGGAGTGAGA+TGG | 0.536341 | 4.2:+88570042 | MS.gene79525:CDS |
TGCTACTAGCAGGACTAACT+CGG | 0.540160 | 4.2:+88569426 | MS.gene79525:CDS |
CTTTACCGGAGTTGATCCTC+GGG | 0.541461 | 4.2:-88569450 | None:intergenic |
GGTTCAACGAAGTGTTTCTC+CGG | 0.543070 | 4.2:+88572105 | MS.gene79525:CDS |
ACTAGGCGGCCTCCACATGT+CGG | 0.543358 | 4.2:-88569272 | None:intergenic |
AACTCTTCTAGCTGGTGATG+TGG | 0.543575 | 4.2:+88572538 | MS.gene79525:CDS |
GGATCAACTCCGGTAAAGAA+AGG | 0.545338 | 4.2:+88569455 | MS.gene79525:CDS |
AAAGCAGTTGCTACTGAATG+TGG | 0.546539 | 4.2:+88570530 | MS.gene79525:CDS |
TGGCAGCTACTAACTTCCCA+TGG | 0.547739 | 4.2:+88571063 | MS.gene79525:CDS |
AATGTGTACATGGTAGAGAA+AGG | 0.548437 | 4.2:-88568748 | None:intergenic |
ACATCATCCCATCTCACTCC+AGG | 0.555451 | 4.2:-88570050 | None:intergenic |
AGTGCCTCATCTATGTCCCA+TGG | 0.556771 | 4.2:-88571080 | None:intergenic |
ATTGGCTGAAATGCTTGAAA+GGG | 0.558913 | 4.2:+88570010 | MS.gene79525:CDS |
AGAATGGTGATGGTGAAGAT+GGG | 0.559086 | 4.2:+88569949 | MS.gene79525:intron |
CCACATGTCGGGATCATCGA+AGG | 0.561657 | 4.2:-88569260 | None:intergenic |
TACCACTGGTCGTGGCTCAA+AGG | 0.562199 | 4.2:+88569396 | MS.gene79525:CDS |
AACAGTGCAACAAATGAAGA+TGG | 0.563634 | 4.2:+88571017 | MS.gene79525:CDS |
TCATCTAACATTAAAATGTG+AGG | 0.565274 | 4.2:-88572822 | None:intergenic |
GGGACATAGATGAGGCACTA+AGG | 0.566845 | 4.2:+88571084 | MS.gene79525:CDS |
CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 4.2:+88572622 | MS.gene79525:CDS |
ACATAGATGAAGTGGCTCGC+CGG | 0.567612 | 4.2:+88571912 | MS.gene79525:CDS |
ATTCATGAAACCACTTCTCA+TGG | 0.568402 | 4.2:-88572141 | None:intergenic |
ATATTGAACGCCATGAGAAG+TGG | 0.568930 | 4.2:+88572131 | MS.gene79525:CDS |
TGATGTCAACATAGATGAAG+TGG | 0.569864 | 4.2:+88571904 | MS.gene79525:CDS |
TATGCAAAGCATTGATGCAT+TGG | 0.571753 | 4.2:+88572863 | MS.gene79525:CDS |
AAGGGAGAATTGGATGAAGT+AGG | 0.574721 | 4.2:-88569241 | None:intergenic |
GAAGTGGCTCGCCGGACTGA+TGG | 0.574862 | 4.2:+88571920 | MS.gene79525:CDS |
CTCCACTATAGCCATCAGTC+CGG | 0.578208 | 4.2:-88571931 | None:intergenic |
ACACTTATAACTCTTCTAGC+TGG | 0.579323 | 4.2:+88572530 | MS.gene79525:CDS |
TCATGGCGTTCAATATCAGC+CGG | 0.580580 | 4.2:-88572124 | None:intergenic |
GCGTTTCAAGATAACCCGAT+TGG | 0.580769 | 4.2:+88569151 | MS.gene79525:CDS |
CCCGGAAGGGGTGGTCAAGT+GGG | 0.581390 | 4.2:+88569313 | MS.gene79525:CDS |
GATAAATTTGAAGACTGTTG+AGG | 0.583479 | 4.2:+88571303 | MS.gene79525:CDS |
ACAACAAGTACCACTGGTCG+TGG | 0.584891 | 4.2:+88569388 | MS.gene79525:CDS |
GTGCCTCATCTATGTCCCAT+GGG | 0.589159 | 4.2:-88571079 | None:intergenic |
ACTTTAGCTTCTAAATGGCG+TGG | 0.593643 | 4.2:+88570581 | MS.gene79525:CDS |
CCTTCGATGATCCCGACATG+TGG | 0.593770 | 4.2:+88569260 | MS.gene79525:CDS |
ATCACGTGTCTGTGAGGATG+AGG | 0.603057 | 4.2:+88572947 | MS.gene79525:CDS |
AGAGATACTAGTAGAAGACC+CGG | 0.607403 | 4.2:+88569295 | MS.gene79525:CDS |
ACAAAGACAACAAGTACCAC+TGG | 0.607828 | 4.2:+88569382 | MS.gene79525:CDS |
GGTGATGTGGTTCGAAGTGA+AGG | 0.608891 | 4.2:+88572551 | MS.gene79525:CDS |
ATCCCATCTCACTCCAGGAG+AGG | 0.610773 | 4.2:-88570045 | None:intergenic |
GATTCTCTTTGCAACGCTAG+GGG | 0.614887 | 4.2:+88570683 | MS.gene79525:CDS |
AGCCTTTGAGCCACGACCAG+TGG | 0.618449 | 4.2:-88569398 | None:intergenic |
GGCAGCTACTAACTTCCCAT+GGG | 0.620186 | 4.2:+88571064 | MS.gene79525:CDS |
TGGTAGCCGAAAATTAGTAA+TGG | 0.621203 | 4.2:+88571037 | MS.gene79525:CDS |
AAGCAGTTGCTACTGAATGT+GGG | 0.621604 | 4.2:+88570531 | MS.gene79525:CDS |
CAAGATAGTAAATGGGCTCG+AGG | 0.624871 | 4.2:+88569352 | MS.gene79525:CDS |
TCGATGATCCCGACATGTGG+AGG | 0.626148 | 4.2:+88569263 | MS.gene79525:CDS |
CACATGTCGGGATCATCGAA+GGG | 0.626296 | 4.2:-88569259 | None:intergenic |
ATTCTCTTTGCAACGCTAGG+GGG | 0.626497 | 4.2:+88570684 | MS.gene79525:CDS |
AACATAAGGACACCTTTCCA+AGG | 0.627199 | 4.2:-88570473 | None:intergenic |
GGTCGTGGCTCAAAGGCTGG+TGG | 0.629778 | 4.2:+88569403 | MS.gene79525:CDS |
GTCTAAGGATGAGATTTCAA+AGG | 0.631259 | 4.2:+88572042 | MS.gene79525:CDS |
AGTAGAAGACCCGGAAGGGG+TGG | 0.634193 | 4.2:+88569304 | MS.gene79525:CDS |
ACTAGTAGAAGACCCGGAAG+GGG | 0.634263 | 4.2:+88569301 | MS.gene79525:CDS |
ATGCTTCCTTGAATGGAATG+AGG | 0.638345 | 4.2:+88571978 | MS.gene79525:CDS |
AGAGCATGAATCGTCTAGAA+GGG | 0.638450 | 4.2:+88570956 | MS.gene79525:CDS |
TTCATCTATGTTGACATCAG+CGG | 0.638522 | 4.2:-88571900 | None:intergenic |
AGGAGGGCTGAAAGCTCGGG+TGG | 0.640042 | 4.2:+88572773 | MS.gene79525:intron |
TGCTTCTTCAAAATCACACA+TGG | 0.645740 | 4.2:-88572074 | None:intergenic |
TGTTAAGAAAGCTCTTTCGG+AGG | 0.646855 | 4.2:+88569090 | MS.gene79525:CDS |
CCGCTGGATGAATTCACTGG+TGG | 0.648121 | 4.2:+88572891 | MS.gene79525:CDS |
GCAGGACTAACTCGGGCCCG+AGG | 0.653959 | 4.2:+88569434 | MS.gene79525:CDS |
CGGCTACATCCAGACCAGGA+GGG | 0.656777 | 4.2:+88572671 | MS.gene79525:CDS |
GTAGAAATTGGAGGAGACGG+AGG | 0.660499 | 4.2:-88569181 | None:intergenic |
CTTCCTTGAATGGAATGAGG+CGG | 0.660510 | 4.2:+88571981 | MS.gene79525:CDS |
GCGTGGAGAAAGTGAGCGAA+TGG | 0.660809 | 4.2:+88570598 | MS.gene79525:CDS |
TCAACTCCGGTAAAGAAAGG+TGG | 0.662437 | 4.2:+88569458 | MS.gene79525:CDS |
CATCCATAAGGGAAGCACAA+CGG | 0.667497 | 4.2:-88570111 | None:intergenic |
GGAATTAGAAGACCTTGGAA+AGG | 0.669356 | 4.2:+88570461 | MS.gene79525:CDS |
CTTCCCATGGGACATAGATG+AGG | 0.669966 | 4.2:+88571076 | MS.gene79525:CDS |
ATACTAGTAGAAGACCCGGA+AGG | 0.671745 | 4.2:+88569299 | MS.gene79525:CDS |
GCTACTAGCAGGACTAACTC+GGG | 0.681260 | 4.2:+88569427 | MS.gene79525:CDS |
GTGTCTGTGAGGATGAGGAA+CGG | 0.685783 | 4.2:+88572952 | MS.gene79525:CDS |
TCGGCTACATCCAGACCAGG+AGG | 0.687323 | 4.2:+88572670 | MS.gene79525:CDS |
TCAAATAAGAGAATATACGA+AGG | 0.694533 | 4.2:+88569975 | MS.gene79525:CDS |
TCGGGCCCGAGGATCAACTC+CGG | 0.708342 | 4.2:+88569445 | MS.gene79525:CDS |
CCACCAGTGAATTCATCCAG+CGG | 0.715399 | 4.2:-88572891 | None:intergenic |
ATTGATATCACGTGTCTGTG+AGG | 0.732247 | 4.2:+88572941 | MS.gene79525:CDS |
AGTGTCTTTCCAGTTCCAGG+AGG | 0.734815 | 4.2:-88570500 | None:intergenic |
CTACTAGTATCTCTACTAGG+CGG | 0.741802 | 4.2:-88569286 | None:intergenic |
GAGAAAGTGAGCGAATGGTG+CGG | 0.752385 | 4.2:+88570603 | MS.gene79525:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATACATATATTAAATGTAAT+CGG | - | chr4.2:88568789-88568808 | None:intergenic | 10.0% |
!! | GCAATAATAATATCATAAAT+CGG | - | chr4.2:88570344-88570363 | None:intergenic | 15.0% |
!!! | ATTATTTTCTTAGCTTATAT+AGG | + | chr4.2:88571342-88571361 | MS.gene79525:intron | 15.0% |
!!! | TGTTTAAAGTTTTATTTCTT+AGG | + | chr4.2:88571458-88571477 | MS.gene79525:intron | 15.0% |
!!! | TTTGTGAATGTTTTTTTATT+TGG | + | chr4.2:88571548-88571567 | MS.gene79525:intron | 15.0% |
!! | AATCTAATCAAGATAGTAAA+TGG | + | chr4.2:88569344-88569363 | MS.gene79525:CDS | 20.0% |
!! | ATCTAATCAAGATAGTAAAT+GGG | + | chr4.2:88569345-88569364 | MS.gene79525:CDS | 20.0% |
!! | ATGATACAATCAGTTAAAAA+GGG | - | chr4.2:88571866-88571885 | None:intergenic | 20.0% |
!! | ATGATATTATTATTGCGAAT+AGG | + | chr4.2:88570348-88570367 | MS.gene79525:intron | 20.0% |
!! | ATTCCTACGTATTATTTATT+CGG | + | chr4.2:88569588-88569607 | MS.gene79525:intron | 20.0% |
!! | ATTGTAAGTTTCAATTTCTA+TGG | + | chr4.2:88569512-88569531 | MS.gene79525:intron | 20.0% |
!! | TGATATTCATAGTAGAAATT+TGG | - | chr4.2:88571418-88571437 | None:intergenic | 20.0% |
!!! | ATGTATAGATTTTTTTGATC+TGG | + | chr4.2:88568803-88568822 | MS.gene79525:intron | 20.0% |
!!! | CAATATTTTTGAAAAACCTT+CGG | - | chr4.2:88568882-88568901 | None:intergenic | 20.0% |
!!! | CATTATTTCTGTTTTTTTCA+GGG | + | chr4.2:88570440-88570459 | MS.gene79525:intron | 20.0% |
!!! | GTATTTGTACTTTTATAGAA+TGG | + | chr4.2:88569933-88569952 | MS.gene79525:intron | 20.0% |
!!! | GTTTAGAATTCTTATAATTG+TGG | + | chr4.2:88570204-88570223 | MS.gene79525:intron | 20.0% |
!!! | TCATTATTTCTGTTTTTTTC+AGG | + | chr4.2:88570439-88570458 | MS.gene79525:intron | 20.0% |
!!! | TTAATATTTTGTTGAGTCTA+TGG | - | chr4.2:88569656-88569675 | None:intergenic | 20.0% |
!!! | TTTTATTTATACTACCACTT+TGG | + | chr4.2:88572201-88572220 | MS.gene79525:intron | 20.0% |
!!! | TTTTTAACTGTTTCATTTCT+AGG | + | chr4.2:88570387-88570406 | MS.gene79525:intron | 20.0% |
! | AAATACCATTCAAAACCATA+AGG | - | chr4.2:88569919-88569938 | None:intergenic | 25.0% |
! | AACGAAGATTTAGTAGAAAT+TGG | - | chr4.2:88569196-88569215 | None:intergenic | 25.0% |
! | AATAAAACTAACACTACCAT+TGG | - | chr4.2:88572188-88572207 | None:intergenic | 25.0% |
! | AGAAGTAAGAAATTGAGAAT+AGG | + | chr4.2:88572584-88572603 | MS.gene79525:CDS | 25.0% |
! | AGATAGAAAGATAACTAAGT+TGG | - | chr4.2:88572434-88572453 | None:intergenic | 25.0% |
! | ATAAGTGCAGTTTATTGAAA+GGG | + | chr4.2:88571598-88571617 | MS.gene79525:intron | 25.0% |
! | ATTGCCAACAAAACAAAAAA+TGG | + | chr4.2:88571494-88571513 | MS.gene79525:intron | 25.0% |
! | CAGAAGAACTTATTCAATTA+TGG | - | chr4.2:88569701-88569720 | None:intergenic | 25.0% |
! | GAAGTAAGAAATTGAGAATA+GGG | + | chr4.2:88572585-88572604 | MS.gene79525:CDS | 25.0% |
! | GATGATACAATCAGTTAAAA+AGG | - | chr4.2:88571867-88571886 | None:intergenic | 25.0% |
! | GTGCAAAACTTAGTAAATTT+GGG | + | chr4.2:88572717-88572736 | MS.gene79525:intron | 25.0% |
! | TCAAATAAGAGAATATACGA+AGG | + | chr4.2:88569975-88569994 | MS.gene79525:CDS | 25.0% |
! | TCATCAATGAAAATTGTACT+TGG | - | chr4.2:88570659-88570678 | None:intergenic | 25.0% |
! | TCATCTAACATTAAAATGTG+AGG | - | chr4.2:88572825-88572844 | None:intergenic | 25.0% |
! | TCTTAGCTTATATAGGATAT+AGG | + | chr4.2:88571349-88571368 | MS.gene79525:intron | 25.0% |
! | TTTCATGTTTAATGTAATGC+AGG | + | chr4.2:88571215-88571234 | MS.gene79525:intron | 25.0% |
!! | AATCCATCACACATAATTTT+TGG | + | chr4.2:88570730-88570749 | MS.gene79525:intron | 25.0% |
!! | CAAAAAGAGTATAGAATGAT+GGG | + | chr4.2:88569770-88569789 | MS.gene79525:intron | 25.0% |
!! | CAAATTTACTAAGTTTTGCA+CGG | - | chr4.2:88572718-88572737 | None:intergenic | 25.0% |
!! | TGAAATTAAGAGTATGTCTA+AGG | + | chr4.2:88572027-88572046 | MS.gene79525:CDS | 25.0% |
!! | TTATTCAATTATGGTTCTGT+AGG | - | chr4.2:88569692-88569711 | None:intergenic | 25.0% |
!! | TTGCAAGTGATAAAAACTTT+TGG | + | chr4.2:88571148-88571167 | MS.gene79525:intron | 25.0% |
!! | TTTTTCATCTATCTTTGACT+TGG | + | chr4.2:88570849-88570868 | MS.gene79525:intron | 25.0% |
!!! | AATGCCATTTTTTGTTTTGT+TGG | - | chr4.2:88571501-88571520 | None:intergenic | 25.0% |
!!! | ATTTGACTTGTTTTTTCTGA+CGG | + | chr4.2:88572266-88572285 | MS.gene79525:intron | 25.0% |
!!! | GTTTTATTTCTTAGGATTTG+AGG | + | chr4.2:88571466-88571485 | MS.gene79525:intron | 25.0% |
!!! | TTTTCATCTATCTTTGACTT+GGG | + | chr4.2:88570850-88570869 | MS.gene79525:intron | 25.0% |
AAATATTCAGGCATCCATAA+GGG | - | chr4.2:88570125-88570144 | None:intergenic | 30.0% | |
AACAGAAATAATGAGCTCAA+TGG | - | chr4.2:88570433-88570452 | None:intergenic | 30.0% | |
AACTGATTGTATCATCTTGA+GGG | + | chr4.2:88571670-88571689 | MS.gene79525:intron | 30.0% | |
AAGTTGCATGTTCATTTACA+TGG | - | chr4.2:88572468-88572487 | None:intergenic | 30.0% | |
ACAACATCTTGTGTAAAAAC+AGG | + | chr4.2:88571760-88571779 | MS.gene79525:intron | 30.0% | |
AGTTGGAAATTCAAATGCTA+AGG | - | chr4.2:88572417-88572436 | None:intergenic | 30.0% | |
ATGGAACAAGTCTAATAGAA+TGG | - | chr4.2:88570414-88570433 | None:intergenic | 30.0% | |
CAACAGTCTTCAAATTTATC+CGG | - | chr4.2:88571303-88571322 | None:intergenic | 30.0% | |
CAACATCTTGTGTAAAAACA+GGG | + | chr4.2:88571761-88571780 | MS.gene79525:intron | 30.0% | |
CAACCGAATAAATAATACGT+AGG | - | chr4.2:88569594-88569613 | None:intergenic | 30.0% | |
CATAAGTGCAGTTTATTGAA+AGG | + | chr4.2:88571597-88571616 | MS.gene79525:intron | 30.0% | |
CGTGCAAAACTTAGTAAATT+TGG | + | chr4.2:88572716-88572735 | MS.gene79525:intron | 30.0% | |
GAAGATTTAGTAGAAATTGG+AGG | - | chr4.2:88569193-88569212 | None:intergenic | 30.0% | |
GAATGTTAAGAAAGCTCTTT+CGG | + | chr4.2:88569087-88569106 | MS.gene79525:CDS | 30.0% | |
GATAAATTTGAAGACTGTTG+AGG | + | chr4.2:88571303-88571322 | MS.gene79525:CDS | 30.0% | |
GTTCCAAAAATTATGTGTGA+TGG | - | chr4.2:88570736-88570755 | None:intergenic | 30.0% | |
TAACTGATTGTATCATCTTG+AGG | + | chr4.2:88571669-88571688 | MS.gene79525:intron | 30.0% | |
TAAGTGCAGTTTATTGAAAG+GGG | + | chr4.2:88571599-88571618 | MS.gene79525:intron | 30.0% | |
TGTGTTATAGTTAGTTCGTT+TGG | + | chr4.2:88568956-88568975 | MS.gene79525:intron | 30.0% | |
TTAATGTTTAGACCCTTGAT+TGG | + | chr4.2:88570273-88570292 | MS.gene79525:intron | 30.0% | |
TTACAAAGCAAACCTTACAA+GGG | - | chr4.2:88571388-88571407 | None:intergenic | 30.0% | |
TTCATCAAAAAGCCAATCAA+GGG | - | chr4.2:88570288-88570307 | None:intergenic | 30.0% | |
TTGCATATCCAAATGATTTG+TGG | - | chr4.2:88572850-88572869 | None:intergenic | 30.0% | |
TTTACAAAGCAAACCTTACA+AGG | - | chr4.2:88571389-88571408 | None:intergenic | 30.0% | |
TTTGAATCTTGTGTGATTTC+AGG | + | chr4.2:88569020-88569039 | MS.gene79525:intron | 30.0% | |
! | CATTTGCTAAAATGTGTACA+TGG | - | chr4.2:88568761-88568780 | None:intergenic | 30.0% |
! | CCAAAAAGAGTATAGAATGA+TGG | + | chr4.2:88569769-88569788 | MS.gene79525:intron | 30.0% |
! | CCAAGACCATTACTAATTTT+CGG | - | chr4.2:88571046-88571065 | None:intergenic | 30.0% |
! | CCATCATTCTATACTCTTTT+TGG | - | chr4.2:88569772-88569791 | None:intergenic | 30.0% |
! | GTACTTTTATAGAATGGTGA+TGG | + | chr4.2:88569939-88569958 | MS.gene79525:intron | 30.0% |
! | TGCATATCCAAATGATTTGT+GGG | - | chr4.2:88572849-88572868 | None:intergenic | 30.0% |
!! | AAAATTGTACTTGGTGCATA+AGG | - | chr4.2:88570650-88570669 | None:intergenic | 30.0% |
!! | ATTTTTGAAAAACCTTCGGA+AGG | - | chr4.2:88568878-88568897 | None:intergenic | 30.0% |
!! | CTCTTAATTTGTACTCTATC+TGG | + | chr4.2:88570877-88570896 | MS.gene79525:intron | 30.0% |
!!! | TCATTGTTGTTTTATGGTGT+TGG | + | chr4.2:88572292-88572311 | MS.gene79525:intron | 30.0% |
!!! | TTTGACTTGTTTTTTCTGAC+GGG | + | chr4.2:88572267-88572286 | MS.gene79525:intron | 30.0% |
!!! | TTTGTCCTTATGGTTTTGAA+TGG | + | chr4.2:88569911-88569930 | MS.gene79525:intron | 30.0% |
!!! | TTTTGAAGAAGCATTGGTAA+AGG | + | chr4.2:88572084-88572103 | MS.gene79525:CDS | 30.0% |
AACAGTGCAACAAATGAAGA+TGG | + | chr4.2:88571017-88571036 | MS.gene79525:CDS | 35.0% | |
AACTGAAGTTGTAAAGCAAC+TGG | + | chr4.2:88569114-88569133 | MS.gene79525:CDS | 35.0% | |
AAGGTTACCTGGAAATATTC+AGG | - | chr4.2:88570137-88570156 | None:intergenic | 35.0% | |
AAGTGCAGTTTATTGAAAGG+GGG | + | chr4.2:88571600-88571619 | MS.gene79525:intron | 35.0% | |
AATGTGTACATGGTAGAGAA+AGG | - | chr4.2:88568751-88568770 | None:intergenic | 35.0% | |
AATTGGCTGAAATGCTTGAA+AGG | + | chr4.2:88570009-88570028 | MS.gene79525:CDS | 35.0% | |
ACACTTATAACTCTTCTAGC+TGG | + | chr4.2:88572530-88572549 | MS.gene79525:CDS | 35.0% | |
ACTGATTGTATCATCTTGAG+GGG | + | chr4.2:88571671-88571690 | MS.gene79525:intron | 35.0% | |
AGATGAACCCACAAATCATT+TGG | + | chr4.2:88572839-88572858 | MS.gene79525:CDS | 35.0% | |
ATTCATGAAACCACTTCTCA+TGG | - | chr4.2:88572144-88572163 | None:intergenic | 35.0% | |
ATTCTAAACTTCAGACAAGC+AGG | - | chr4.2:88570193-88570212 | None:intergenic | 35.0% | |
ATTGGCTGAAATGCTTGAAA+GGG | + | chr4.2:88570010-88570029 | MS.gene79525:CDS | 35.0% | |
CCATAAGGACAAAACAACAA+AGG | - | chr4.2:88569904-88569923 | None:intergenic | 35.0% | |
CCGAAAATTAGTAATGGTCT+TGG | + | chr4.2:88571043-88571062 | MS.gene79525:CDS | 35.0% | |
CTTCTACTAGTATCTCTACT+AGG | - | chr4.2:88569292-88569311 | None:intergenic | 35.0% | |
GAAATATTCAGGCATCCATA+AGG | - | chr4.2:88570126-88570145 | None:intergenic | 35.0% | |
GAAGTAGGATACTCATCTAA+TGG | - | chr4.2:88569229-88569248 | None:intergenic | 35.0% | |
GAGAAGTGGTTTCATGAATT+TGG | + | chr4.2:88572145-88572164 | MS.gene79525:intron | 35.0% | |
GTCTAAGGATGAGATTTCAA+AGG | + | chr4.2:88572042-88572061 | MS.gene79525:CDS | 35.0% | |
GTGTTTCATCCATTGTTAGT+AGG | - | chr4.2:88572634-88572653 | None:intergenic | 35.0% | |
GTTCATCAAAAAGCCAATCA+AGG | - | chr4.2:88570289-88570308 | None:intergenic | 35.0% | |
GTTTAATGTAATGCAGGAGA+AGG | + | chr4.2:88571221-88571240 | MS.gene79525:intron | 35.0% | |
TCGTTACGACTCTCAAAATT+TGG | - | chr4.2:88571274-88571293 | None:intergenic | 35.0% | |
TCTTGTGTAAAAACAGGGTA+AGG | + | chr4.2:88571766-88571785 | MS.gene79525:intron | 35.0% | |
TGATGTCAACATAGATGAAG+TGG | + | chr4.2:88571904-88571923 | MS.gene79525:CDS | 35.0% | |
TGATTGTATCATCTTGCATC+AGG | + | chr4.2:88571874-88571893 | MS.gene79525:intron | 35.0% | |
TGCTTCTTCAAAATCACACA+TGG | - | chr4.2:88572077-88572096 | None:intergenic | 35.0% | |
TGGTAGCCGAAAATTAGTAA+TGG | + | chr4.2:88571037-88571056 | MS.gene79525:CDS | 35.0% | |
TTAGTAGAAATTGGAGGAGA+CGG | - | chr4.2:88569187-88569206 | None:intergenic | 35.0% | |
TTATGTAAAAGCAGCCTTTC+TGG | + | chr4.2:88572494-88572513 | MS.gene79525:intron | 35.0% | |
TTCATCTATGTTGACATCAG+CGG | - | chr4.2:88571903-88571922 | None:intergenic | 35.0% | |
TTTATCCCTGACTACTGTTT+GGG | + | chr4.2:88569854-88569873 | MS.gene79525:intron | 35.0% | |
! | TGTTTGATAATACCTTCCGA+AGG | + | chr4.2:88568863-88568882 | MS.gene79525:intron | 35.0% |
! | TTTGGAGTGAGAATTGTCTA+AGG | - | chr4.2:88570156-88570175 | None:intergenic | 35.0% |
!! | AGAGTTGACTTGTTTCATCA+GGG | + | chr4.2:88570926-88570945 | MS.gene79525:intron | 35.0% |
!! | CAGGTTTTTCTGAGAACATT+TGG | - | chr4.2:88570174-88570193 | None:intergenic | 35.0% |
!! | CTGCTACTTTAGCTTCTAAA+TGG | + | chr4.2:88570576-88570595 | MS.gene79525:CDS | 35.0% |
!! | GTGTGATTTTGAAGAAGCAT+TGG | + | chr4.2:88572078-88572097 | MS.gene79525:CDS | 35.0% |
!! | TAGAGTTGACTTGTTTCATC+AGG | + | chr4.2:88570925-88570944 | MS.gene79525:intron | 35.0% |
!! | TATGCAAAGCATTGATGCAT+TGG | + | chr4.2:88572863-88572882 | MS.gene79525:CDS | 35.0% |
!! | TTACACAAGATGTTGTTTCC+AGG | - | chr4.2:88571756-88571775 | None:intergenic | 35.0% |
!! | TTGATTTTTCAGCACCAGAA+AGG | - | chr4.2:88572511-88572530 | None:intergenic | 35.0% |
!!! | CCTTTGTTGTTTTGTCCTTA+TGG | + | chr4.2:88569901-88569920 | MS.gene79525:intron | 35.0% |
!!! | CGGGTTTCATTGTTGTTTTA+TGG | + | chr4.2:88572286-88572305 | MS.gene79525:intron | 35.0% |
!!! | TTGTTGTTTTATGGTGTTGG+AGG | + | chr4.2:88572295-88572314 | MS.gene79525:intron | 35.0% |
AAACTACCCAAACAGTAGTC+AGG | - | chr4.2:88569863-88569882 | None:intergenic | 40.0% | |
AAAGCAGTTGCTACTGAATG+TGG | + | chr4.2:88570530-88570549 | MS.gene79525:CDS | 40.0% | |
AACATAAGGACACCTTTCCA+AGG | - | chr4.2:88570476-88570495 | None:intergenic | 40.0% | |
AACTACCCAAACAGTAGTCA+GGG | - | chr4.2:88569862-88569881 | None:intergenic | 40.0% | |
AAGCAGTTGCTACTGAATGT+GGG | + | chr4.2:88570531-88570550 | MS.gene79525:CDS | 40.0% | |
AAGGGAGAATTGGATGAAGT+AGG | - | chr4.2:88569244-88569263 | None:intergenic | 40.0% | |
ACAAAGACAACAAGTACCAC+TGG | + | chr4.2:88569382-88569401 | MS.gene79525:CDS | 40.0% | |
AGAGATACTAGTAGAAGACC+CGG | + | chr4.2:88569295-88569314 | MS.gene79525:CDS | 40.0% | |
AGAGCATGAATCGTCTAGAA+GGG | + | chr4.2:88570956-88570975 | MS.gene79525:CDS | 40.0% | |
AGCAACTGGATGCAGATAAA+AGG | + | chr4.2:88569128-88569147 | MS.gene79525:CDS | 40.0% | |
AGTGCAGTTTATTGAAAGGG+GGG | + | chr4.2:88571601-88571620 | MS.gene79525:intron | 40.0% | |
ATATTGAACGCCATGAGAAG+TGG | + | chr4.2:88572131-88572150 | MS.gene79525:CDS | 40.0% | |
ATCAGTTAAAAAGGGCAACC+CGG | - | chr4.2:88571858-88571877 | None:intergenic | 40.0% | |
ATCCATTTCGCACGAATTGA+AGG | - | chr4.2:88569067-88569086 | None:intergenic | 40.0% | |
ATGCTTCCTTGAATGGAATG+AGG | + | chr4.2:88571978-88571997 | MS.gene79525:CDS | 40.0% | |
ATGGATGCCTGAATATTTCC+AGG | + | chr4.2:88570127-88570146 | MS.gene79525:CDS | 40.0% | |
ATTGATATCACGTGTCTGTG+AGG | + | chr4.2:88572941-88572960 | MS.gene79525:CDS | 40.0% | |
ATTTGAGCTTGACCCTTGTA+AGG | + | chr4.2:88571373-88571392 | MS.gene79525:intron | 40.0% | |
CAAGCATTTCAGCCAATTCA+GGG | - | chr4.2:88570007-88570026 | None:intergenic | 40.0% | |
CGACTCTCAAAATTTGGAAG+AGG | - | chr4.2:88571268-88571287 | None:intergenic | 40.0% | |
CTACTAGTATCTCTACTAGG+CGG | - | chr4.2:88569289-88569308 | None:intergenic | 40.0% | |
CTTTGTGGACCTACTAACAA+TGG | + | chr4.2:88572622-88572641 | MS.gene79525:CDS | 40.0% | |
GAGATATTCCCAACACTTTG+TGG | + | chr4.2:88572607-88572626 | MS.gene79525:CDS | 40.0% | |
GCAACTGGATGCAGATAAAA+GGG | + | chr4.2:88569129-88569148 | MS.gene79525:CDS | 40.0% | |
GCGAATAGGTTCATGCTAAT+AGG | + | chr4.2:88570362-88570381 | MS.gene79525:intron | 40.0% | |
GGAATTAGAAGACCTTGGAA+AGG | + | chr4.2:88570461-88570480 | MS.gene79525:CDS | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | + | chr4.2:88571716-88571735 | MS.gene79525:intron | 40.0% | |
GTTTATCCCTGACTACTGTT+TGG | + | chr4.2:88569853-88569872 | MS.gene79525:intron | 40.0% | |
TCAAAATCACACATGGCAAC+AGG | - | chr4.2:88572070-88572089 | None:intergenic | 40.0% | |
TCAAGCATTTCAGCCAATTC+AGG | - | chr4.2:88570008-88570027 | None:intergenic | 40.0% | |
TCAGCATAAAGACACACCAA+TGG | + | chr4.2:88572169-88572188 | MS.gene79525:intron | 40.0% | |
TCCATTTCGCACGAATTGAA+GGG | - | chr4.2:88569066-88569085 | None:intergenic | 40.0% | |
TGATTCTCTTTGCAACGCTA+GGG | + | chr4.2:88570682-88570701 | MS.gene79525:CDS | 40.0% | |
TGTTAAGAAAGCTCTTTCGG+AGG | + | chr4.2:88569090-88569109 | MS.gene79525:CDS | 40.0% | |
TTAGTAGGTCCACAAAGTGT+TGG | - | chr4.2:88572619-88572638 | None:intergenic | 40.0% | |
TTCAGGGAATTAGAAGACCT+TGG | + | chr4.2:88570456-88570475 | MS.gene79525:intron | 40.0% | |
TTGATTCTCTTTGCAACGCT+AGG | + | chr4.2:88570681-88570700 | MS.gene79525:CDS | 40.0% | |
TTGTATCATCTTGCATCAGG+TGG | + | chr4.2:88571877-88571896 | MS.gene79525:intron | 40.0% | |
! | ACTTTAGCTTCTAAATGGCG+TGG | + | chr4.2:88570581-88570600 | MS.gene79525:CDS | 40.0% |
! | ATTTCTATGGAGCATTCTGC+TGG | + | chr4.2:88569525-88569544 | MS.gene79525:intron | 40.0% |
! | GAGAATTGTCTAAGGTTACC+TGG | - | chr4.2:88570148-88570167 | None:intergenic | 40.0% |
! | TAGTAGGTCCACAAAGTGTT+GGG | - | chr4.2:88572618-88572637 | None:intergenic | 40.0% |
! | TGTTGAGTCTATGGTTCTGT+AGG | - | chr4.2:88569647-88569666 | None:intergenic | 40.0% |
!! | ACTTTGGTTCTCTGTTGTGT+GGG | + | chr4.2:88572217-88572236 | MS.gene79525:intron | 40.0% |
!! | AGAATGATGGGCTTTATGAG+AGG | + | chr4.2:88569782-88569801 | MS.gene79525:intron | 40.0% |
!! | AGAATGGTGATGGTGAAGAT+GGG | + | chr4.2:88569949-88569968 | MS.gene79525:intron | 40.0% |
!! | ATGGGCTTTATGAGAGGTTT+TGG | + | chr4.2:88569788-88569807 | MS.gene79525:intron | 40.0% |
!! | GAACTTCTAGTTCAGGTTGA+TGG | + | chr4.2:88570987-88571006 | MS.gene79525:CDS | 40.0% |
!! | GAAGTCTGAACTTCTAGTTC+AGG | + | chr4.2:88570980-88570999 | MS.gene79525:CDS | 40.0% |
!! | TAGAATGGTGATGGTGAAGA+TGG | + | chr4.2:88569948-88569967 | MS.gene79525:intron | 40.0% |
!! | TGGAAAGGTGTCCTTATGTT+TGG | + | chr4.2:88570476-88570495 | MS.gene79525:CDS | 40.0% |
AAGACTGTTGAGGCAAGTAG+TGG | + | chr4.2:88571313-88571332 | MS.gene79525:intron | 45.0% | |
AATGTAATGCAGGAGAAGGC+TGG | + | chr4.2:88571225-88571244 | MS.gene79525:intron | 45.0% | |
ACCCTTCAATTCGTGCGAAA+TGG | + | chr4.2:88569062-88569081 | MS.gene79525:CDS | 45.0% | |
ACTTGTTTCATCAGGGCTTC+TGG | + | chr4.2:88570933-88570952 | MS.gene79525:intron | 45.0% | |
ATACTAGTAGAAGACCCGGA+AGG | + | chr4.2:88569299-88569318 | MS.gene79525:CDS | 45.0% | |
ATCATCTTGAGGGGTAACCT+TGG | + | chr4.2:88571680-88571699 | MS.gene79525:intron | 45.0% | |
ATTCTCTTTGCAACGCTAGG+GGG | + | chr4.2:88570684-88570703 | MS.gene79525:CDS | 45.0% | |
ATTTCAGCCAATTCAGGGTC+AGG | - | chr4.2:88570002-88570021 | None:intergenic | 45.0% | |
CACACAACAGAGAACCAAAG+TGG | - | chr4.2:88572218-88572237 | None:intergenic | 45.0% | |
CTTCCTTGAATGGAATGAGG+CGG | + | chr4.2:88571981-88572000 | MS.gene79525:CDS | 45.0% | |
GATGCACCACCTTTCTTTAC+CGG | - | chr4.2:88569467-88569486 | None:intergenic | 45.0% | |
GATGTGTTAGAAACCTCTCC+TGG | + | chr4.2:88570032-88570051 | MS.gene79525:CDS | 45.0% | |
GATTCTCTTTGCAACGCTAG+GGG | + | chr4.2:88570683-88570702 | MS.gene79525:CDS | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr4.2:88571791-88571810 | MS.gene79525:intron | 45.0% | |
GCGTTTCAAGATAACCCGAT+TGG | + | chr4.2:88569151-88569170 | MS.gene79525:CDS | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr4.2:88571788-88571807 | MS.gene79525:intron | 45.0% | |
GGATCAACTCCGGTAAAGAA+AGG | + | chr4.2:88569455-88569474 | MS.gene79525:CDS | 45.0% | |
GGATGTAGCCGAAAAAGGTA+CGG | - | chr4.2:88572662-88572681 | None:intergenic | 45.0% | |
GTAAAGAAAGGTGGTGCATC+TGG | + | chr4.2:88569467-88569486 | MS.gene79525:CDS | 45.0% | |
GTCATGTGACTGTAAGGTCA+CGG | + | chr4.2:88571722-88571741 | MS.gene79525:intron | 45.0% | |
TACTAGTAGAAGACCCGGAA+GGG | + | chr4.2:88569300-88569319 | MS.gene79525:CDS | 45.0% | |
TCAACTCCGGTAAAGAAAGG+TGG | + | chr4.2:88569458-88569477 | MS.gene79525:CDS | 45.0% | |
TCATGGCGTTCAATATCAGC+CGG | - | chr4.2:88572127-88572146 | None:intergenic | 45.0% | |
TCATGTGACTGTAAGGTCAC+GGG | + | chr4.2:88571723-88571742 | MS.gene79525:intron | 45.0% | |
TGCTACTAGCAGGACTAACT+CGG | + | chr4.2:88569426-88569445 | MS.gene79525:CDS | 45.0% | |
TGTCGTGATGCTTCCTTGAA+TGG | + | chr4.2:88571971-88571990 | MS.gene79525:CDS | 45.0% | |
TTCCAGGAGGACCAAACATA+AGG | - | chr4.2:88570490-88570509 | None:intergenic | 45.0% | |
! | AACTCTTCTAGCTGGTGATG+TGG | + | chr4.2:88572538-88572557 | MS.gene79525:CDS | 45.0% |
! | CAAGATAGTAAATGGGCTCG+AGG | + | chr4.2:88569352-88569371 | MS.gene79525:CDS | 45.0% |
! | CACCTGTTCCGTACCTTTTT+CGG | + | chr4.2:88572651-88572670 | MS.gene79525:CDS | 45.0% |
! | CATCCATAAGGGAAGCACAA+CGG | - | chr4.2:88570114-88570133 | None:intergenic | 45.0% |
! | GAGAGCATGAATCGTCTAGA+AGG | + | chr4.2:88570955-88570974 | MS.gene79525:CDS | 45.0% |
! | GAGGCACTAAGGTTCGTATT+TGG | + | chr4.2:88571095-88571114 | MS.gene79525:intron | 45.0% |
! | GGTTCAACGAAGTGTTTCTC+CGG | + | chr4.2:88572105-88572124 | MS.gene79525:CDS | 45.0% |
! | TCTTTACCGGAGTTGATCCT+CGG | - | chr4.2:88569454-88569473 | None:intergenic | 45.0% |
!! | AACCACGCGAAAAGCACTTA+AGG | + | chr4.2:88568902-88568921 | MS.gene79525:intron | 45.0% |
!! | AGAAGTGTCTTTCCAGTTCC+AGG | - | chr4.2:88570506-88570525 | None:intergenic | 45.0% |
!! | AGAGTCGTAACGAGTTGATC+CGG | + | chr4.2:88571281-88571300 | MS.gene79525:CDS | 45.0% |
!! | CACTTTGGTTCTCTGTTGTG+TGG | + | chr4.2:88572216-88572235 | MS.gene79525:intron | 45.0% |
AAACCTCTCCTGGAGTGAGA+TGG | + | chr4.2:88570042-88570061 | MS.gene79525:CDS | 50.0% | |
AACCTCTCCTGGAGTGAGAT+GGG | + | chr4.2:88570043-88570062 | MS.gene79525:CDS | 50.0% | |
AAGCCGTTGTGCTTCCCTTA+TGG | + | chr4.2:88570108-88570127 | MS.gene79525:CDS | 50.0% | |
ACAACAAGTACCACTGGTCG+TGG | + | chr4.2:88569388-88569407 | MS.gene79525:CDS | 50.0% | |
ACATAGATGAAGTGGCTCGC+CGG | + | chr4.2:88571912-88571931 | MS.gene79525:CDS | 50.0% | |
ACATCATCCCATCTCACTCC+AGG | - | chr4.2:88570053-88570072 | None:intergenic | 50.0% | |
ACCATCTTATCCCCACTGTC+AGG | + | chr4.2:88572753-88572772 | MS.gene79525:intron | 50.0% | |
ACTAGTAGAAGACCCGGAAG+GGG | + | chr4.2:88569301-88569320 | MS.gene79525:CDS | 50.0% | |
AGTGCCTCATCTATGTCCCA+TGG | - | chr4.2:88571083-88571102 | None:intergenic | 50.0% | |
AGTGTCTTTCCAGTTCCAGG+AGG | - | chr4.2:88570503-88570522 | None:intergenic | 50.0% | |
ATCACGTGTCTGTGAGGATG+AGG | + | chr4.2:88572947-88572966 | MS.gene79525:CDS | 50.0% | |
ATCTTATCCCCACTGTCAGG+AGG | + | chr4.2:88572756-88572775 | MS.gene79525:intron | 50.0% | |
ATGTTTGGTCCTCCTGGAAC+TGG | + | chr4.2:88570491-88570510 | MS.gene79525:CDS | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | - | chr4.2:88571700-88571719 | None:intergenic | 50.0% | |
CACATGTCGGGATCATCGAA+GGG | - | chr4.2:88569262-88569281 | None:intergenic | 50.0% | |
CCACCAGTGAATTCATCCAG+CGG | - | chr4.2:88572894-88572913 | None:intergenic | 50.0% | |
CTCCACTATAGCCATCAGTC+CGG | - | chr4.2:88571934-88571953 | None:intergenic | 50.0% | |
CTTCCCATGGGACATAGATG+AGG | + | chr4.2:88571076-88571095 | MS.gene79525:CDS | 50.0% | |
CTTCCGCCTCATTCCATTCA+AGG | - | chr4.2:88571987-88572006 | None:intergenic | 50.0% | |
GAGAAAGTGAGCGAATGGTG+CGG | + | chr4.2:88570603-88570622 | MS.gene79525:CDS | 50.0% | |
GATCCGCTGGATGAATTCAC+TGG | + | chr4.2:88572888-88572907 | MS.gene79525:CDS | 50.0% | |
GCTACTAGCAGGACTAACTC+GGG | + | chr4.2:88569427-88569446 | MS.gene79525:CDS | 50.0% | |
GCTGCAGTGTGTCAGAAACT+TGG | - | chr4.2:88569819-88569838 | None:intergenic | 50.0% | |
GGCAGCTACTAACTTCCCAT+GGG | + | chr4.2:88571064-88571083 | MS.gene79525:CDS | 50.0% | |
GGGATCATCGAAGGGAGAAT+TGG | - | chr4.2:88569254-88569273 | None:intergenic | 50.0% | |
GGTCTGGATGTAGCCGAAAA+AGG | - | chr4.2:88572667-88572686 | None:intergenic | 50.0% | |
GGTGATGTGGTTCGAAGTGA+AGG | + | chr4.2:88572551-88572570 | MS.gene79525:CDS | 50.0% | |
GTAGAAATTGGAGGAGACGG+AGG | - | chr4.2:88569184-88569203 | None:intergenic | 50.0% | |
GTCCTTATGTTTGGTCCTCC+TGG | + | chr4.2:88570485-88570504 | MS.gene79525:CDS | 50.0% | |
GTGAGATGGGATGATGTTGC+AGG | + | chr4.2:88570056-88570075 | MS.gene79525:CDS | 50.0% | |
GTGCCTCATCTATGTCCCAT+GGG | - | chr4.2:88571082-88571101 | None:intergenic | 50.0% | |
GTGTCTGTGAGGATGAGGAA+CGG | + | chr4.2:88572952-88572971 | MS.gene79525:CDS | 50.0% | |
TCCTGACAGTGGGGATAAGA+TGG | - | chr4.2:88572757-88572776 | None:intergenic | 50.0% | |
TCTTATCCCCACTGTCAGGA+GGG | + | chr4.2:88572757-88572776 | MS.gene79525:intron | 50.0% | |
TGAAAGCTCGGGTGGTATTC+AGG | + | chr4.2:88572781-88572800 | MS.gene79525:CDS | 50.0% | |
TGGCAGCTACTAACTTCCCA+TGG | + | chr4.2:88571063-88571082 | MS.gene79525:CDS | 50.0% | |
! | AGCCGAAAAAGGTACGGAAC+AGG | - | chr4.2:88572656-88572675 | None:intergenic | 50.0% |
! | CTCCTTAAGTGCTTTTCGCG+TGG | - | chr4.2:88568907-88568926 | None:intergenic | 50.0% |
! | CTTTACCGGAGTTGATCCTC+GGG | - | chr4.2:88569453-88569472 | None:intergenic | 50.0% |
! | GGGACATAGATGAGGCACTA+AGG | + | chr4.2:88571084-88571103 | MS.gene79525:CDS | 50.0% |
! | TTTTCGGCTACATCCAGACC+AGG | + | chr4.2:88572667-88572686 | MS.gene79525:CDS | 50.0% |
AAGGTCACGGGTTCAAGTCC+TGG | + | chr4.2:88571735-88571754 | MS.gene79525:intron | 55.0% | |
ACGGAGGACGTCTTCCAATC+GGG | - | chr4.2:88569168-88569187 | None:intergenic | 55.0% | |
ATCCCATCTCACTCCAGGAG+AGG | - | chr4.2:88570048-88570067 | None:intergenic | 55.0% | |
CCACATGTCGGGATCATCGA+AGG | - | chr4.2:88569263-88569282 | None:intergenic | 55.0% | |
CCGCTGGATGAATTCACTGG+TGG | + | chr4.2:88572891-88572910 | MS.gene79525:CDS | 55.0% | |
CCTTCGATGATCCCGACATG+TGG | + | chr4.2:88569260-88569279 | MS.gene79525:CDS | 55.0% | |
CGAAGGTCCTGACCCTGAAT+TGG | + | chr4.2:88569992-88570011 | MS.gene79525:CDS | 55.0% | |
CTTGCTTACCAAGTCCCTCC+TGG | - | chr4.2:88572688-88572707 | None:intergenic | 55.0% | |
CTTTCAGCCCTCCTGACAGT+GGG | - | chr4.2:88572767-88572786 | None:intergenic | 55.0% | |
GACGGAGGACGTCTTCCAAT+CGG | - | chr4.2:88569169-88569188 | None:intergenic | 55.0% | |
GCGTGGAGAAAGTGAGCGAA+TGG | + | chr4.2:88570598-88570617 | MS.gene79525:CDS | 55.0% | |
GGAATGAGGCGGAAGATAGC+AGG | + | chr4.2:88571992-88572011 | MS.gene79525:CDS | 55.0% | |
TACCACTGGTCGTGGCTCAA+AGG | + | chr4.2:88569396-88569415 | MS.gene79525:CDS | 55.0% | |
TCGATGATCCCGACATGTGG+AGG | + | chr4.2:88569263-88569282 | MS.gene79525:CDS | 55.0% | |
TGTCAGGAGGGCTGAAAGCT+CGG | + | chr4.2:88572769-88572788 | MS.gene79525:intron | 55.0% | |
TTACCAAGTCCCTCCTGGTC+TGG | - | chr4.2:88572683-88572702 | None:intergenic | 55.0% | |
TTTCAGCCCTCCTGACAGTG+GGG | - | chr4.2:88572766-88572785 | None:intergenic | 55.0% | |
! | CAAATGGTGGAACCCCTTCC+CGG | + | chr4.2:88571804-88571823 | MS.gene79525:intron | 55.0% |
! | GGAGGGACTTGGTAAGCAAG+AGG | + | chr4.2:88572688-88572707 | MS.gene79525:intron | 55.0% |
!! | TGATGCATTGGCTGATCCGC+TGG | + | chr4.2:88572875-88572894 | MS.gene79525:CDS | 55.0% |
ACCCACTTGACCACCCCTTC+CGG | - | chr4.2:88569317-88569336 | None:intergenic | 60.0% | |
ACTAGGCGGCCTCCACATGT+CGG | - | chr4.2:88569275-88569294 | None:intergenic | 60.0% | |
ACTGAAGCTCCCGCATACGC+AGG | - | chr4.2:88571832-88571851 | None:intergenic | 60.0% | |
ACTGGTCGTGGCTCAAAGGC+TGG | + | chr4.2:88569400-88569419 | MS.gene79525:CDS | 60.0% | |
AGCCTTTGAGCCACGACCAG+TGG | - | chr4.2:88569401-88569420 | None:intergenic | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | + | chr4.2:88571689-88571708 | MS.gene79525:intron | 60.0% | |
AGTAGAAGACCCGGAAGGGG+TGG | + | chr4.2:88569304-88569323 | MS.gene79525:CDS | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | + | chr4.2:88571836-88571855 | MS.gene79525:intron | 60.0% | |
CATCCAGACCAGGAGGGACT+TGG | + | chr4.2:88572677-88572696 | MS.gene79525:CDS | 60.0% | |
CGCCGGACTGATGGCTATAG+TGG | + | chr4.2:88571929-88571948 | MS.gene79525:CDS | 60.0% | |
CGGCTACATCCAGACCAGGA+GGG | + | chr4.2:88572671-88572690 | MS.gene79525:CDS | 60.0% | |
CGGGAAGGGGTTCCACCATT+TGG | - | chr4.2:88571806-88571825 | None:intergenic | 60.0% | |
CTGAAGCTCCCGCATACGCA+GGG | - | chr4.2:88571831-88571850 | None:intergenic | 60.0% | |
GCTTTCAGCCCTCCTGACAG+TGG | - | chr4.2:88572768-88572787 | None:intergenic | 60.0% | |
GTCAGGAGGGCTGAAAGCTC+GGG | + | chr4.2:88572770-88572789 | MS.gene79525:intron | 60.0% | |
TCGGCTACATCCAGACCAGG+AGG | + | chr4.2:88572670-88572689 | MS.gene79525:CDS | 60.0% | |
!! | AGGCTGGTGGTGCTACTAGC+AGG | + | chr4.2:88569416-88569435 | MS.gene79525:CDS | 60.0% |
ACCCGGAAGGGGTGGTCAAG+TGG | + | chr4.2:88569312-88569331 | MS.gene79525:CDS | 65.0% | |
AGGAGGGCTGAAAGCTCGGG+TGG | + | chr4.2:88572773-88572792 | MS.gene79525:intron | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | - | chr4.2:88571819-88571838 | None:intergenic | 65.0% | |
CCCACTTGACCACCCCTTCC+GGG | - | chr4.2:88569316-88569335 | None:intergenic | 65.0% | |
CCCGGAAGGGGTGGTCAAGT+GGG | + | chr4.2:88569313-88569332 | MS.gene79525:CDS | 65.0% | |
CTAGGCGGCCTCCACATGTC+GGG | - | chr4.2:88569274-88569293 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | + | chr4.2:88571819-88571838 | MS.gene79525:intron | 65.0% | |
GAAGTGGCTCGCCGGACTGA+TGG | + | chr4.2:88571920-88571939 | MS.gene79525:CDS | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | - | chr4.2:88571820-88571839 | None:intergenic | 65.0% | |
GGTCGTGGCTCAAAGGCTGG+TGG | + | chr4.2:88569403-88569422 | MS.gene79525:CDS | 65.0% | |
TCGGGCCCGAGGATCAACTC+CGG | + | chr4.2:88569445-88569464 | MS.gene79525:CDS | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | + | chr4.2:88571837-88571856 | MS.gene79525:intron | 65.0% | |
TTCCCGGACCCTGCGTATGC+GGG | + | chr4.2:88571820-88571839 | MS.gene79525:intron | 65.0% | |
CGCATACGCAGGGTCCGGGA+AGG | - | chr4.2:88571821-88571840 | None:intergenic | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | - | chr4.2:88571825-88571844 | None:intergenic | 70.0% | |
GCAGGACTAACTCGGGCCCG+AGG | + | chr4.2:88569434-88569453 | MS.gene79525:CDS | 70.0% | |
GCTCCCGCATACGCAGGGTC+CGG | - | chr4.2:88571826-88571845 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 88568745 | 88572986 | 88568745 | ID=MS.gene79525 |
chr4.2 | mRNA | 88568745 | 88572986 | 88568745 | ID=MS.gene79525.t1;Parent=MS.gene79525 |
chr4.2 | exon | 88568745 | 88568761 | 88568745 | ID=MS.gene79525.t1.exon1;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88568745 | 88568761 | 88568745 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88569042 | 88569492 | 88569042 | ID=MS.gene79525.t1.exon2;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88569042 | 88569492 | 88569042 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88569951 | 88570148 | 88569951 | ID=MS.gene79525.t1.exon3;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88569951 | 88570148 | 88569951 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88570461 | 88570705 | 88570461 | ID=MS.gene79525.t1.exon4;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88570461 | 88570705 | 88570461 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88570947 | 88571105 | 88570947 | ID=MS.gene79525.t1.exon5;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88570947 | 88571105 | 88570947 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88571237 | 88571324 | 88571237 | ID=MS.gene79525.t1.exon6;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88571237 | 88571324 | 88571237 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88571896 | 88572152 | 88571896 | ID=MS.gene79525.t1.exon7;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88571896 | 88572152 | 88571896 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88572508 | 88572698 | 88572508 | ID=MS.gene79525.t1.exon8;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88572508 | 88572698 | 88572508 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
chr4.2 | exon | 88572775 | 88572986 | 88572775 | ID=MS.gene79525.t1.exon9;Parent=MS.gene79525.t1 |
chr4.2 | CDS | 88572775 | 88572986 | 88572775 | ID=cds.MS.gene79525.t1;Parent=MS.gene79525.t1 |
Gene Sequence |
Protein sequence |