AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene79528

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79528.t1 MTR_4g011810 98.866 529 2 1 1 525 1 529 0.0 1065
MS.gene79528.t1 MTR_4g096870 46.129 310 153 6 197 500 74 375 7.04e-90 281
MS.gene79528.t1 MTR_2g086160 42.598 331 155 5 221 523 112 435 1.72e-85 271
MS.gene79528.t1 MTR_4g053350 42.236 322 154 4 227 523 116 430 5.60e-85 270
MS.gene79528.t1 MTR_4g053350 42.236 322 154 4 227 523 116 430 1.09e-84 269
MS.gene79528.t1 MTR_6g023875 38.889 378 197 9 167 524 296 659 7.93e-81 265
MS.gene79528.t1 MTR_2g086160 50.413 242 108 4 221 458 112 345 6.23e-80 254
MS.gene79528.t1 MTR_6g023855 37.405 393 216 9 150 524 144 524 2.19e-76 250
MS.gene79528.t1 MTR_7g075520 38.542 384 209 8 150 524 120 485 1.32e-74 244
MS.gene79528.t1 MTR_6g023865 34.048 373 206 7 179 522 86 447 2.11e-66 222
MS.gene79528.t1 MTR_8g099065 38.056 360 183 8 181 508 478 829 2.08e-64 225
MS.gene79528.t1 MTR_1g088750 39.048 315 173 5 222 523 921 1229 4.44e-64 226
MS.gene79528.t1 MTR_1g088750 39.048 315 173 5 222 523 872 1180 5.72e-64 226
MS.gene79528.t1 MTR_1g088730 41.275 298 158 5 222 508 915 1206 8.54e-63 223
MS.gene79528.t1 MTR_5g009840 42.969 256 138 3 217 470 494 743 4.05e-62 218
MS.gene79528.t1 MTR_6g033740 43.750 256 135 4 217 470 478 726 9.77e-61 214
MS.gene79528.t1 MTR_3g089100 45.614 228 116 2 237 462 896 1117 4.14e-60 215
MS.gene79528.t1 MTR_3g089100 45.614 228 116 2 237 462 901 1122 4.17e-60 215
MS.gene79528.t1 MTR_3g089100 45.614 228 116 2 237 462 930 1151 4.52e-60 215
MS.gene79528.t1 MTR_1g099480 41.634 257 140 4 217 470 446 695 7.72e-60 211
MS.gene79528.t1 MTR_1g101870 42.063 252 136 4 219 467 537 781 6.45e-57 204
MS.gene79528.t1 MTR_1g101870 42.063 252 136 4 219 467 485 729 7.39e-57 203
MS.gene79528.t1 MTR_1g063380 39.145 304 162 7 229 518 469 763 7.17e-56 201
MS.gene79528.t1 MTR_1g063380 42.373 236 124 4 238 470 205 431 3.98e-47 176
MS.gene79528.t1 MTR_7g101870 38.158 304 164 6 229 518 470 763 1.71e-55 199
MS.gene79528.t1 MTR_7g101870 41.949 236 125 4 238 470 206 432 1.22e-46 174
MS.gene79528.t1 MTR_2g095210 38.158 304 165 6 229 518 397 691 6.36e-55 197
MS.gene79528.t1 MTR_2g095210 41.121 107 59 2 218 320 184 290 1.42e-14 77.0
MS.gene79528.t1 MTR_1g099470 41.700 247 133 5 219 462 414 652 2.23e-54 196
MS.gene79528.t1 MTR_7g089040 38.218 348 178 8 185 525 631 948 1.66e-53 195
MS.gene79528.t1 MTR_7g089040 35.586 222 130 6 275 493 422 633 2.50e-26 114
MS.gene79528.t1 MTR_6g023845 32.931 331 155 8 215 524 82 366 5.95e-51 178
MS.gene79528.t1 MTR_3g092070 37.736 265 150 5 238 500 81 332 5.88e-50 176
MS.gene79528.t1 MTR_3g092080 38.491 265 148 6 238 500 84 335 2.40e-49 174
MS.gene79528.t1 MTR_3g092080 38.491 265 148 6 238 500 84 335 3.99e-49 174
MS.gene79528.t1 MTR_8g099065 43.290 231 121 5 181 409 478 700 4.17e-49 180
MS.gene79528.t1 MTR_3g092070 38.866 247 142 4 238 482 81 320 7.43e-49 172
MS.gene79528.t1 MTR_7g088830 38.206 301 154 6 229 525 649 921 2.85e-48 180
MS.gene79528.t1 MTR_7g088830 30.851 282 174 9 215 488 370 638 7.45e-24 106
MS.gene79528.t1 MTR_1g099480 44.898 196 99 3 217 409 446 635 5.92e-48 176
MS.gene79528.t1 MTR_4g094270 36.054 294 154 7 232 518 150 416 1.88e-47 170
MS.gene79528.t1 MTR_3g117230 39.844 256 131 9 220 467 125 365 4.18e-47 169
MS.gene79528.t1 MTR_3g112260 39.844 256 131 9 220 467 122 362 4.57e-47 169
MS.gene79528.t1 MTR_4g074920 36.644 292 152 7 237 523 668 931 2.80e-46 174
MS.gene79528.t1 MTR_2g095320 36.770 291 148 7 236 512 419 687 1.19e-45 171
MS.gene79528.t1 MTR_2g095320 38.996 259 139 6 218 470 130 375 2.32e-42 161
MS.gene79528.t1 MTR_1g083330 38.683 243 134 5 232 468 161 394 6.39e-43 158
MS.gene79528.t1 MTR_4g033235 38.683 243 134 5 232 468 162 395 7.36e-43 158
MS.gene79528.t1 MTR_1g069105 36.538 260 151 5 232 486 182 432 3.57e-42 157
MS.gene79528.t1 MTR_7g099640 36.923 260 150 5 232 486 181 431 4.11e-42 156
MS.gene79528.t1 MTR_7g089290 34.589 292 177 6 236 522 637 919 5.72e-42 161
MS.gene79528.t1 MTR_7g089290 34.589 292 177 6 236 522 665 947 7.32e-42 160
MS.gene79528.t1 MTR_7g099640 37.860 243 138 4 232 469 181 415 8.75e-42 155
MS.gene79528.t1 MTR_2g007010 32.450 302 185 6 229 525 519 806 7.73e-40 154
MS.gene79528.t1 MTR_2g007010 32.639 288 168 8 237 506 237 516 1.34e-35 142
MS.gene79528.t1 MTR_3g115110 37.736 265 139 8 229 487 242 486 1.89e-39 152
MS.gene79528.t1 MTR_2g438140 37.302 252 144 5 232 478 220 462 3.22e-39 152
MS.gene79528.t1 MTR_3g062510 34.874 238 142 4 236 468 157 386 3.45e-39 147
MS.gene79528.t1 MTR_7g088850 36.100 241 139 5 236 470 280 511 5.43e-39 150
MS.gene79528.t1 MTR_7g088850 29.437 231 144 9 245 468 24 242 2.10e-14 76.3
MS.gene79528.t1 MTR_2g438140 37.698 252 143 5 232 478 280 522 5.65e-39 151
MS.gene79528.t1 MTR_7g010800 37.154 253 143 7 232 478 200 442 4.06e-38 149
MS.gene79528.t1 MTR_4g094662 37.154 253 143 6 232 478 223 465 1.04e-37 147
MS.gene79528.t1 MTR_1g095660 36.398 261 139 9 220 467 104 350 1.38e-37 142
MS.gene79528.t1 MTR_7g088980 35.200 250 147 5 227 470 125 365 2.69e-37 142
MS.gene79528.t1 MTR_3g104470 34.551 301 165 10 233 525 215 491 1.06e-36 144
MS.gene79528.t1 MTR_3g104480 35.974 303 160 11 229 525 215 489 1.13e-36 144
MS.gene79528.t1 MTR_7g088980 35.200 250 147 5 227 470 275 515 1.76e-36 142
MS.gene79528.t1 MTR_7g088980 36.017 236 134 9 241 468 20 246 6.47e-27 114
MS.gene79528.t1 MTR_7g088980 36.100 241 139 5 236 470 216 447 1.87e-36 141
MS.gene79528.t1 MTR_7g088980 34.118 170 98 6 305 468 17 178 2.86e-12 69.3
MS.gene79528.t1 MTR_7g088980 35.200 250 147 5 227 470 301 541 3.67e-36 142
MS.gene79528.t1 MTR_7g088980 35.211 213 124 6 262 468 68 272 1.93e-24 107
MS.gene79528.t1 MTR_2g101290 37.121 264 145 7 210 467 392 640 6.11e-36 142
MS.gene79528.t1 MTR_3g023900 31.847 314 171 8 227 519 520 811 1.17e-35 142
MS.gene79528.t1 MTR_3g023900 33.562 292 171 8 237 508 233 521 1.29e-32 133
MS.gene79528.t1 MTR_7g096060 38.431 255 132 8 238 480 240 481 1.24e-35 141
MS.gene79528.t1 MTR_2g101290 37.121 264 145 7 210 467 392 640 1.25e-35 142
MS.gene79528.t1 MTR_2g078630 33.333 267 146 7 227 470 41 298 6.07e-35 140
MS.gene79528.t1 MTR_2g078630 33.333 267 146 7 227 470 569 826 7.69e-35 140
MS.gene79528.t1 MTR_7g078570 36.027 297 158 10 238 525 192 465 8.16e-35 139
MS.gene79528.t1 MTR_4g067100 36.032 247 140 6 232 469 374 611 1.06e-34 139
MS.gene79528.t1 MTR_4g067100 36.032 247 140 6 232 469 374 611 1.07e-34 139
MS.gene79528.t1 MTR_6g016600 36.948 249 142 6 235 478 314 552 1.80e-33 134
MS.gene79528.t1 MTR_1g069105 38.614 202 111 4 232 428 182 375 2.10e-33 131
MS.gene79528.t1 MTR_4g064350 35.216 301 163 10 234 525 316 593 2.73e-33 135
MS.gene79528.t1 MTR_5g075340 32.492 317 175 11 215 525 213 496 4.00e-33 134
MS.gene79528.t1 MTR_1g028390 35.793 271 152 8 227 493 318 570 1.88e-32 132
MS.gene79528.t1 MTR_3g062510 40.860 186 97 4 236 416 157 334 2.22e-32 128
MS.gene79528.t1 MTR_6g059690 37.255 255 135 8 238 480 197 438 3.13e-32 131
MS.gene79528.t1 MTR_5g069780 34.783 299 164 11 238 525 313 591 3.81e-32 131
MS.gene79528.t1 MTR_0376s0020 36.255 251 142 7 238 480 1 241 4.59e-32 130
MS.gene79528.t1 MTR_2g024440 34.677 248 138 6 238 474 296 530 9.83e-31 126
MS.gene79528.t1 MTR_2g024440 34.677 248 138 6 238 474 297 531 1.04e-30 126
MS.gene79528.t1 MTR_2g024440 34.677 248 138 6 238 474 214 448 1.14e-30 125
MS.gene79528.t1 MTR_3g023890 31.546 317 172 9 227 520 374 668 3.23e-30 125
MS.gene79528.t1 MTR_3g023890 30.952 294 166 11 240 508 94 375 9.78e-25 108
MS.gene79528.t1 MTR_3g462930 33.670 297 170 10 238 525 304 582 1.36e-29 124
MS.gene79528.t1 MTR_5g075360 33.221 298 169 10 232 525 12 283 1.88e-28 118
MS.gene79528.t1 MTR_5g075360 33.221 298 169 10 232 525 62 333 6.42e-28 117
MS.gene79528.t1 MTR_5g075360 33.221 298 169 10 232 525 188 459 7.51e-28 118
MS.gene79528.t1 MTR_8g023550 31.834 289 156 9 191 467 117 376 7.73e-28 115
MS.gene79528.t1 MTR_8g099605 33.730 252 137 7 235 469 401 639 1.14e-27 118
MS.gene79528.t1 MTR_5g075360 33.221 298 169 10 232 525 238 509 1.32e-27 117
MS.gene79528.t1 MTR_8g099605 33.730 252 137 7 235 469 160 398 1.50e-27 117
MS.gene79528.t1 MTR_3g096000 35.409 257 146 7 233 478 291 538 1.87e-27 117
MS.gene79528.t1 MTR_8g469460 33.559 295 132 10 238 525 207 444 3.72e-27 116
MS.gene79528.t1 MTR_7g088980 36.017 236 134 9 241 468 20 246 3.91e-27 115
MS.gene79528.t1 MTR_7g088980 29.435 248 121 6 227 470 275 472 2.52e-22 100
MS.gene79528.t1 MTR_3g104490 32.542 295 143 10 238 525 207 452 1.11e-26 114
MS.gene79528.t1 MTR_7g088980 35.211 213 124 6 262 468 68 272 1.55e-24 107
MS.gene79528.t1 MTR_7g088980 29.435 248 121 6 227 470 301 498 4.54e-22 100
MS.gene79528.t1 MTR_4g088885 33.333 267 140 12 269 514 256 505 8.62e-24 105
MS.gene79528.t1 MTR_8g056860 30.000 220 146 5 252 467 484 699 2.84e-22 101
MS.gene79528.t1 MTR_5g074850 32.653 196 120 5 275 467 542 728 8.18e-19 90.9
MS.gene79528.t1 MTR_1g044600 31.739 230 129 7 303 525 193 401 4.45e-18 87.4
MS.gene79528.t1 MTR_6g005760 27.488 211 117 6 273 458 362 561 4.04e-14 75.5
MS.gene79528.t1 MTR_6g005760 27.488 211 117 6 273 458 234 433 4.47e-14 75.1
MS.gene79528.t1 MTR_5g020530 27.830 212 112 7 273 457 387 584 5.51e-14 75.1
MS.gene79528.t1 MTR_3g076930 28.926 242 132 8 202 425 137 356 1.65e-13 73.2
MS.gene79528.t1 MTR_4g083460 28.400 250 109 9 240 467 839 1040 2.88e-12 70.1
MS.gene79528.t1 MTR_4g077880 25.943 212 120 6 273 458 368 568 9.36e-12 68.2
MS.gene79528.t1 MTR_4g112600 43.038 79 43 2 241 317 3 81 3.51e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene79528.t1 AT1G80350 81.489 524 92 5 4 525 3 523 0.0 874
MS.gene79528.t1 AT2G34560 44.186 344 168 9 192 524 50 380 8.67e-92 286
MS.gene79528.t1 AT2G34560 44.186 344 168 9 192 524 59 389 1.15e-91 286
MS.gene79528.t1 AT2G27600 40.683 322 159 4 227 523 118 432 1.80e-82 263
MS.gene79528.t1 AT2G45500 42.151 344 174 8 185 524 31 353 8.60e-82 259
MS.gene79528.t1 AT2G45500 42.151 344 174 8 185 524 31 353 8.60e-82 259
MS.gene79528.t1 AT2G45500 42.151 344 174 8 185 524 164 486 5.33e-80 258
MS.gene79528.t1 AT2G45500 42.151 344 174 8 185 524 168 490 6.94e-80 258
MS.gene79528.t1 AT2G45500 42.151 344 174 8 185 524 174 496 8.94e-80 258
MS.gene79528.t1 AT3G27120 42.020 307 165 4 220 524 382 677 3.01e-78 259
MS.gene79528.t1 AT3G19740 39.863 291 162 5 237 523 700 981 1.22e-64 227
MS.gene79528.t1 AT4G28000 41.971 274 150 5 218 489 496 762 2.56e-63 221
MS.gene79528.t1 AT4G28000 41.971 274 150 5 218 489 496 762 3.58e-63 221
MS.gene79528.t1 AT4G28000 41.971 274 150 5 218 489 494 760 3.68e-63 221
MS.gene79528.t1 AT4G02480 39.241 316 171 6 222 523 943 1251 1.23e-62 222
MS.gene79528.t1 AT1G02890 40.000 315 170 7 222 523 924 1232 4.31e-62 221
MS.gene79528.t1 AT1G64110 38.462 325 175 7 218 523 495 813 7.18e-62 218
MS.gene79528.t1 AT1G64110 38.462 325 175 7 218 523 495 813 7.18e-62 218
MS.gene79528.t1 AT1G64110 38.462 325 175 7 218 523 497 815 7.33e-62 218
MS.gene79528.t1 AT1G64110 38.462 325 175 7 218 523 497 815 7.33e-62 218
MS.gene79528.t1 AT1G64110 38.462 325 175 7 218 523 492 810 8.32e-62 217
MS.gene79528.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene79528.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene79528.t1 AT1G50140 40.273 293 158 7 237 523 710 991 1.62e-61 218
MS.gene79528.t1 AT5G52882 44.094 254 133 5 219 470 494 740 1.82e-61 216
MS.gene79528.t1 AT1G50140 40.273 293 158 7 237 523 688 969 2.41e-61 218
MS.gene79528.t1 AT1G50140 40.273 293 158 7 237 523 688 969 2.41e-61 218
MS.gene79528.t1 AT4G24860 39.163 263 152 2 226 486 778 1034 2.91e-58 209
MS.gene79528.t1 AT4G24860 39.163 263 152 2 226 486 801 1057 3.58e-58 209
MS.gene79528.t1 AT4G24860 39.163 263 152 2 226 486 805 1061 4.85e-58 209
MS.gene79528.t1 AT4G24860 39.163 263 152 2 226 486 803 1059 4.92e-58 209
MS.gene79528.t1 AT5G03340 38.689 305 162 6 229 518 468 762 5.81e-56 201
MS.gene79528.t1 AT5G03340 40.541 259 139 5 218 470 181 430 1.87e-46 174
MS.gene79528.t1 AT3G09840 37.705 305 165 6 229 518 468 762 1.33e-53 194
MS.gene79528.t1 AT3G09840 40.541 259 139 5 218 470 181 430 1.24e-46 174
MS.gene79528.t1 AT3G53230 38.870 301 165 5 229 518 469 761 6.81e-53 192
MS.gene79528.t1 AT3G53230 40.927 259 138 5 218 470 182 431 5.40e-47 175
MS.gene79528.t1 AT4G27680 36.531 271 157 4 238 506 81 338 8.78e-51 179
MS.gene79528.t1 AT3G56690 39.933 298 155 8 229 517 712 994 8.64e-50 184
MS.gene79528.t1 AT3G56690 36.607 224 125 6 272 492 416 625 3.51e-32 132
MS.gene79528.t1 AT5G53540 36.604 265 153 5 238 500 84 335 7.12e-49 174
MS.gene79528.t1 AT1G62130 41.949 236 113 6 237 470 742 955 5.67e-48 179
MS.gene79528.t1 AT1G62130 41.949 236 113 6 237 470 749 962 6.28e-48 179
MS.gene79528.t1 AT5G19990 36.054 294 154 7 232 518 94 360 6.85e-47 167
MS.gene79528.t1 AT5G19990 36.054 294 154 7 232 518 152 418 1.00e-46 168
MS.gene79528.t1 AT5G19990 36.054 294 154 7 232 518 152 418 1.00e-46 168
MS.gene79528.t1 AT5G20000 36.054 294 154 7 232 518 152 418 1.26e-46 168
MS.gene79528.t1 AT5G43010 39.062 256 133 9 220 467 122 362 1.95e-46 167
MS.gene79528.t1 AT1G45000 39.062 256 133 9 220 467 122 362 2.27e-46 167
MS.gene79528.t1 AT1G02890 35.556 315 156 9 222 523 924 1204 1.23e-45 172
MS.gene79528.t1 AT1G03000 35.374 294 173 7 236 522 653 936 9.77e-45 169
MS.gene79528.t1 AT3G05530 38.683 243 134 5 232 468 162 395 4.89e-43 159
MS.gene79528.t1 AT1G09100 38.683 243 134 5 232 468 161 394 1.19e-42 157
MS.gene79528.t1 AT2G20140 37.860 243 138 4 232 469 179 413 2.03e-42 157
MS.gene79528.t1 AT4G29040 37.449 243 139 4 232 469 179 413 4.11e-42 156
MS.gene79528.t1 AT1G53750 35.986 289 159 8 191 467 117 391 1.11e-40 152
MS.gene79528.t1 AT1G50250 38.113 265 138 8 229 487 252 496 1.09e-39 154
MS.gene79528.t1 AT2G03670 34.000 300 175 7 180 472 232 515 1.59e-39 152
MS.gene79528.t1 AT2G03670 34.615 234 139 6 242 468 23 249 6.19e-30 124
MS.gene79528.t1 AT5G58290 34.874 238 142 4 236 468 150 379 2.81e-39 148
MS.gene79528.t1 AT5G42270 37.736 265 139 8 229 487 240 484 3.57e-39 152
MS.gene79528.t1 AT5G15250 37.037 243 137 6 232 468 215 447 5.06e-39 151
MS.gene79528.t1 AT2G26140 36.082 291 158 9 239 525 225 491 3.29e-38 149
MS.gene79528.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene79528.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene79528.t1 AT2G30950 36.364 242 140 5 232 468 218 450 1.55e-36 144
MS.gene79528.t1 AT1G53780 36.047 258 144 7 220 469 323 567 1.61e-36 143
MS.gene79528.t1 AT1G53780 36.047 258 144 7 220 469 323 567 1.61e-36 143
MS.gene79528.t1 AT2G30950 36.364 242 140 5 232 468 222 454 1.74e-36 144
MS.gene79528.t1 AT1G53780 36.047 258 144 7 220 469 322 566 1.82e-36 143
MS.gene79528.t1 AT1G53780 36.047 258 144 7 220 469 344 588 1.98e-36 143
MS.gene79528.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene79528.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene79528.t1 AT1G06430 36.694 248 140 6 232 474 211 446 2.31e-36 144
MS.gene79528.t1 AT3G01610 32.416 327 186 8 203 508 474 786 2.40e-36 144
MS.gene79528.t1 AT3G01610 33.106 293 179 5 232 508 224 515 3.51e-36 144
MS.gene79528.t1 AT3G01610 32.219 329 184 9 203 508 474 786 2.61e-36 144
MS.gene79528.t1 AT3G01610 33.106 293 179 5 232 508 224 515 4.11e-36 143
MS.gene79528.t1 AT5G15250 34.211 266 136 7 232 468 215 470 1.91e-35 139
MS.gene79528.t1 AT3G16290 37.121 264 145 7 210 467 384 632 4.66e-35 140
MS.gene79528.t1 AT1G07510 34.437 302 156 10 238 525 324 597 1.97e-34 138
MS.gene79528.t1 AT3G02450 37.751 249 140 6 235 478 328 566 2.21e-34 137
MS.gene79528.t1 AT1G05910 35.628 247 141 6 232 469 372 609 4.02e-34 138
MS.gene79528.t1 AT3G15120 34.454 238 138 6 240 468 718 946 1.53e-33 136
MS.gene79528.t1 AT3G15120 34.454 238 138 6 240 468 728 956 1.83e-33 136
MS.gene79528.t1 AT5G53170 36.822 258 141 8 240 493 361 600 3.56e-33 134
MS.gene79528.t1 AT2G29080 35.216 301 154 10 238 525 319 591 1.04e-32 133
MS.gene79528.t1 AT4G04180 34.894 235 129 6 238 461 316 537 5.46e-32 130
MS.gene79528.t1 AT4G04180 34.894 235 129 6 238 461 311 532 5.75e-32 130
MS.gene79528.t1 AT3G47060 38.333 240 129 7 238 468 322 551 1.34e-31 130
MS.gene79528.t1 AT2G03670 34.615 234 139 6 242 468 23 249 1.04e-30 124
MS.gene79528.t1 AT2G03670 34.634 205 121 5 180 379 232 428 2.79e-21 96.7
MS.gene79528.t1 AT5G58870 33.220 295 174 7 238 525 326 604 4.43e-30 125
MS.gene79528.t1 AT5G08470 33.333 237 140 5 240 470 834 1058 1.42e-29 124
MS.gene79528.t1 AT5G08470 33.333 237 140 5 240 470 843 1067 1.57e-29 124
MS.gene79528.t1 AT1G45000 41.420 169 86 6 220 382 122 283 5.07e-29 117
MS.gene79528.t1 AT5G64580 35.019 257 147 7 233 478 308 555 4.73e-27 116
MS.gene79528.t1 AT4G23940 33.865 251 136 7 235 468 424 661 7.33e-27 115
MS.gene79528.t1 AT4G04910 33.333 267 140 12 269 514 246 495 1.38e-25 111
MS.gene79528.t1 AT1G79560 31.818 198 127 5 275 468 527 720 3.93e-23 104
MS.gene79528.t1 AT1G79560 31.818 198 127 5 275 468 527 720 4.21e-23 104
MS.gene79528.t1 AT1G79560 29.218 243 151 7 243 468 482 720 5.12e-23 103
MS.gene79528.t1 AT5G08470 37.956 137 77 3 240 372 843 975 5.08e-19 91.7
MS.gene79528.t1 AT3G04340 33.831 201 110 9 235 425 778 965 2.17e-15 80.1
MS.gene79528.t1 AT2G18330 30.872 149 91 4 273 420 384 521 7.28e-13 71.6
MS.gene79528.t1 AT5G16930 26.415 212 119 7 273 458 397 597 1.41e-12 70.9
MS.gene79528.t1 AT4G36580 25.581 215 120 6 273 458 381 584 2.90e-12 69.7
MS.gene79528.t1 AT3G03060 29.114 158 100 4 273 429 385 531 1.67e-11 67.4

Find 145 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCGCCTCATTCCATTTA+AGG 0.090167 4.2:-88543424 None:intergenic
GAGAAGTGGTTTCATGAATT+TGG 0.158813 4.2:+88543585 MS.gene79528:CDS
TCTTTACGACTCTCAAAATT+TGG 0.172323 4.2:-88542946 None:intergenic
AATCTAATCAAGATAGTAAA+TGG 0.183201 4.2:+88540994 MS.gene79528:CDS
AACGAAGATTTCGTAGAAAT+TGG 0.195781 4.2:-88540843 None:intergenic
ATCCATTTCGCACGAATTAA+AGG 0.199610 4.2:-88540714 None:intergenic
TGTCGTGATGCTTCCTTAAA+TGG 0.219991 4.2:+88543411 MS.gene79528:CDS
TCAAGCATTTCAGCCAATTC+AGG 0.249762 4.2:-88541597 None:intergenic
AGCAACTAGATGCAGATAAA+AGG 0.275644 4.2:+88540778 MS.gene79528:CDS
GAACTTCTGGTTCAGGTTGA+TGG 0.286049 4.2:+88542649 MS.gene79528:CDS
ACTTCTATCATCTTCTTTGA+TGG 0.304578 4.2:+88539656 MS.gene79528:CDS
AAGCCGTTGTGCTTCCCTTA+TGG 0.308493 4.2:+88541700 MS.gene79528:CDS
CTGCTACTTTAGCTTCTAAA+TGG 0.310247 4.2:+88542232 MS.gene79528:CDS
ACCCACTTGACCACCCCTTC+CGG 0.318156 4.2:-88540964 None:intergenic
GATGCACCACCTTTCTTTAC+CGG 0.324656 4.2:-88541116 None:intergenic
GTCCTTATGTTTGGTCCTCC+TGG 0.327313 4.2:+88542141 MS.gene79528:CDS
AAGGGTGAAGTCTGAACTTC+TGG 0.334804 4.2:+88542636 MS.gene79528:CDS
TGGAAAGGTGTCCTTATGTT+TGG 0.341007 4.2:+88542132 MS.gene79528:CDS
AGAAGTGTCTTTCCAGTTCC+AGG 0.347867 4.2:-88542159 None:intergenic
TTCTATTTCATAAGGGCATC+TGG 0.352796 4.2:+88542595 MS.gene79528:intron
CGGTGGTGGTGGTTCTTCAT+TGG 0.361816 4.2:+88539574 MS.gene79528:CDS
GAAGTCTGAACTTCTGGTTC+AGG 0.362123 4.2:+88542642 MS.gene79528:CDS
ATGGATGCCTGAATATTTCC+AGG 0.363539 4.2:+88541719 MS.gene79528:CDS
CCCACTTGACCACCCCTTCC+GGG 0.366495 4.2:-88540963 None:intergenic
TTCATCAATGAAAATTGTAC+TGG 0.368845 4.2:-88542313 None:intergenic
TGAAATTAAGAGTATGTCTA+AGG 0.369309 4.2:+88543467 MS.gene79528:CDS
AAGGTTACCTGGAAATATTC+AGG 0.370724 4.2:-88541726 None:intergenic
ATGTTTGGTCCTCCTGGAAC+TGG 0.386041 4.2:+88542147 MS.gene79528:CDS
GTAAAGAAAGGTGGTGCATC+TGG 0.387564 4.2:+88541119 MS.gene79528:CDS
ATCCTTTAATTCGTGCGAAA+TGG 0.394478 4.2:+88540712 MS.gene79528:CDS
CGAAGGTCCTGACCCTGAAT+TGG 0.398187 4.2:+88541584 MS.gene79528:CDS
GCAAGAGATTACGCTCTTGA+AGG 0.422552 4.2:+88539623 MS.gene79528:CDS
GATGGAGGGCGTCTTCCAAT+AGG 0.424263 4.2:-88540816 None:intergenic
GGTGGTGGTTCTTCATTGGC+AGG 0.425015 4.2:+88539578 MS.gene79528:CDS
GAGAGCATGAATCATCTAGA+AGG 0.428309 4.2:+88542617 MS.gene79528:CDS
CGTCGAACTGATGGCTATAG+TGG 0.438729 4.2:+88543369 MS.gene79528:CDS
TCAAAATCACACATGGCAAC+AGG 0.440279 4.2:-88543507 None:intergenic
GAAGTAGGATACTCATCTAA+TGG 0.443032 4.2:-88540876 None:intergenic
CAACGGTCTTCAAATTTATC+CGG 0.446879 4.2:-88542975 None:intergenic
GCGTTTAAAGATAACCCTAT+TGG 0.447225 4.2:+88540801 MS.gene79528:CDS
TCTTTACCGGAGTTGATCCT+CGG 0.447984 4.2:-88541103 None:intergenic
CCGAAAATTAGTAATGGTCT+TGG 0.448313 4.2:+88542705 MS.gene79528:CDS
GAAATATTCAGGCATCCATA+AGG 0.458081 4.2:-88541715 None:intergenic
GTGCTGTTGCACAAATCAAC+AGG 0.461564 4.2:+88539678 MS.gene79528:CDS
ATTTCAGCCAATTCAGGGTC+AGG 0.462738 4.2:-88541591 None:intergenic
CTAGGTGGCCTCCACACGTC+GGG 0.465003 4.2:-88540921 None:intergenic
CAAGCATTTCAGCCAATTCA+GGG 0.466679 4.2:-88541596 None:intergenic
TTCGTAGAAATTGGAGGCGA+TGG 0.467792 4.2:-88540834 None:intergenic
GCAACTAGATGCAGATAAAA+GGG 0.468454 4.2:+88540779 MS.gene79528:CDS
ACTGGCCGTGGCGCAAAGGC+TGG 0.474587 4.2:+88541050 MS.gene79528:CDS
TCCAGGGAATTAGAAGACCT+TGG 0.475874 4.2:+88542112 MS.gene79528:intron
AAAACAATGGCCGGTGGTGG+TGG 0.478709 4.2:+88539563 None:intergenic
AATTGGCTGAAATGCTTGAA+AGG 0.482451 4.2:+88541601 MS.gene79528:CDS
AGGCTGGTGGTGCTACTAGC+AGG 0.485231 4.2:+88541066 MS.gene79528:CDS
TTGATTCTCTATGCAATGCT+AGG 0.489844 4.2:+88542337 MS.gene79528:CDS
CGACTCTCAAAATTTGGAAG+AGG 0.493711 4.2:-88542940 None:intergenic
GTGAGATGGGATGATGTTGC+AGG 0.493791 4.2:+88541648 MS.gene79528:CDS
AGAGTCGTAAAGAGTTGATC+CGG 0.496827 4.2:+88542956 MS.gene79528:CDS
TTCCAGGAGGACCAAACATA+AGG 0.497922 4.2:-88542143 None:intergenic
TGATTCTCTATGCAATGCTA+GGG 0.500887 4.2:+88542338 MS.gene79528:CDS
ACCCGGAAGGGGTGGTCAAG+TGG 0.503616 4.2:+88540962 MS.gene79528:CDS
ATGGAGGGCGTCTTCCAATA+GGG 0.504260 4.2:-88540815 None:intergenic
TAGAATGGTGATGGTGAAGA+TGG 0.504832 4.2:+88541540 MS.gene79528:intron
ATCTAATCAAGATAGTAAAT+GGG 0.505265 4.2:+88540995 MS.gene79528:CDS
AATGTAATGCAGGAGAAGGC+TGG 0.512666 4.2:+88542900 MS.gene79528:intron
AACCTCTCCTGGAGTGAGAT+GGG 0.514638 4.2:+88541635 MS.gene79528:CDS
CAATGAAGAACCACCACCAC+CGG 0.515825 4.2:-88539573 None:intergenic
GATGTGTTAGAAACCTCTCC+TGG 0.517926 4.2:+88541624 MS.gene79528:CDS
AAATATTCAGGCATCCATAA+GGG 0.520528 4.2:-88541714 None:intergenic
AGCCTTTGCGCCACGGCCAG+TGG 0.526659 4.2:-88541048 None:intergenic
AAGGAAGAATTAGATGAAGT+AGG 0.527073 4.2:-88540891 None:intergenic
GAAGATTTCGTAGAAATTGG+AGG 0.528602 4.2:-88540840 None:intergenic
GAGAAAACAATGGCCGGTGG+TGG 0.529484 4.2:+88539560 None:intergenic
TACTAGTAGAAGACCCGGAA+GGG 0.533945 4.2:+88540950 MS.gene79528:CDS
AAACCTCTCCTGGAGTGAGA+TGG 0.536341 4.2:+88541634 MS.gene79528:CDS
CTTCTACTAGTATCTCTGCT+AGG 0.536669 4.2:-88540939 None:intergenic
TACCACTGGCCGTGGCGCAA+AGG 0.538736 4.2:+88541046 MS.gene79528:CDS
CTTTACCGGAGTTGATCCTC+GGG 0.541461 4.2:-88541102 None:intergenic
GGAATGAGGCGAAAGATAGC+AGG 0.543448 4.2:+88543432 MS.gene79528:CDS
GTAGAAATTGGAGGCGATGG+AGG 0.544696 4.2:-88540831 None:intergenic
GAAGTGGCTCGTCGAACTGA+TGG 0.544733 4.2:+88543360 MS.gene79528:CDS
GGATCAACTCCGGTAAAGAA+AGG 0.545338 4.2:+88541107 MS.gene79528:CDS
AAAGCAGTTGCTACTGAATG+TGG 0.546539 4.2:+88542186 MS.gene79528:CDS
TGGCAGCTACTAACTTCCCA+TGG 0.547739 4.2:+88542725 MS.gene79528:CDS
GGTCCAACGAAGTGTTTCTC+CGG 0.550231 4.2:+88543545 MS.gene79528:CDS
GGCCGTGGCGCAAAGGCTGG+TGG 0.554155 4.2:+88541053 MS.gene79528:CDS
ACATCATCCCATCTCACTCC+AGG 0.555451 4.2:-88541642 None:intergenic
AGTGCCTCATCTATGTCCCA+TGG 0.556771 4.2:-88542742 None:intergenic
ATTGGCTGAAATGCTTGAAA+GGG 0.558913 4.2:+88541602 MS.gene79528:CDS
AGAATGGTGATGGTGAAGAT+GGG 0.559086 4.2:+88541541 MS.gene79528:intron
TAGAAATTGGAGGCGATGGA+GGG 0.560439 4.2:-88540830 None:intergenic
AACAGTGCAACAAATGAAGA+TGG 0.563634 4.2:+88542679 MS.gene79528:CDS
CACCACCAGCCTTTGCGCCA+CGG 0.565084 4.2:-88541055 None:intergenic
GGGACATAGATGAGGCACTA+AGG 0.566845 4.2:+88542746 MS.gene79528:CDS
ATTCATGAAACCACTTCTCA+TGG 0.568402 4.2:-88543581 None:intergenic
ATATTGAACGCCATGAGAAG+TGG 0.568930 4.2:+88543571 MS.gene79528:CDS
TGATGTCAACATAGATGAAG+TGG 0.569864 4.2:+88543344 MS.gene79528:CDS
GGAAGCATCACGACAGACAT+TGG 0.572577 4.2:-88543403 None:intergenic
ACAACAAGTACCACTGGCCG+TGG 0.574301 4.2:+88541038 MS.gene79528:CDS
TCATGGCGTTCAATATCAGC+CGG 0.580580 4.2:-88543564 None:intergenic
CCCGGAAGGGGTGGTCAAGT+GGG 0.581390 4.2:+88540963 MS.gene79528:CDS
TCGATGATCCCGACGTGTGG+AGG 0.583952 4.2:+88540913 MS.gene79528:CDS
GTGCCTCATCTATGTCCCAT+GGG 0.589159 4.2:-88542741 None:intergenic
ACTTTAGCTTCTAAATGGCG+TGG 0.593643 4.2:+88542237 MS.gene79528:CDS
GAGAGAGAGAAAACAATGGC+CGG 0.598446 4.2:+88539554 None:intergenic
TCATCAATGAAAATTGTACT+GGG 0.599644 4.2:-88542312 None:intergenic
ACAAAGACAACAAGTACCAC+TGG 0.602530 4.2:+88541032 MS.gene79528:CDS
CAGCCGGAGAAACACTTCGT+TGG 0.605662 4.2:-88543548 None:intergenic
GCTACTAGCAGGACTAACTC+AGG 0.606405 4.2:+88541077 MS.gene79528:CDS
AGAGATACTAGTAGAAGACC+CGG 0.607403 4.2:+88540945 MS.gene79528:CDS
GCTAGGTGGCCTCCACACGT+CGG 0.609241 4.2:-88540922 None:intergenic
ATCCCATCTCACTCCAGGAG+AGG 0.610773 4.2:-88541637 None:intergenic
ATGCTTCCTTAAATGGAATG+AGG 0.612903 4.2:+88543418 MS.gene79528:CDS
CCACACGTCGGGATCATCGA+AGG 0.616072 4.2:-88540910 None:intergenic
TGTTAAGAAAGCTCTTTCTG+AGG 0.617902 4.2:+88540740 MS.gene79528:CDS
GGCAGCTACTAACTTCCCAT+GGG 0.620186 4.2:+88542726 MS.gene79528:CDS
TGGTAGCCGAAAATTAGTAA+TGG 0.621203 4.2:+88542699 MS.gene79528:CDS
AAGCAGTTGCTACTGAATGT+GGG 0.621604 4.2:+88542187 MS.gene79528:CDS
CAAGATAGTAAATGGGCTCG+AGG 0.624871 4.2:+88541002 MS.gene79528:CDS
AACATAAGGACACCTTTCCA+AGG 0.627199 4.2:-88542129 None:intergenic
GTCTAAGGATGAGATTTCAA+AGG 0.631259 4.2:+88543482 MS.gene79528:CDS
CCTTCGATGATCCCGACGTG+TGG 0.633383 4.2:+88540910 MS.gene79528:CDS
AGTAGAAGACCCGGAAGGGG+TGG 0.634193 4.2:+88540954 MS.gene79528:CDS
ACTAGTAGAAGACCCGGAAG+GGG 0.634263 4.2:+88540951 MS.gene79528:CDS
AGAGCATGAATCATCTAGAA+GGG 0.636154 4.2:+88542618 MS.gene79528:CDS
GATAAATTTGAAGACCGTTG+AGG 0.636632 4.2:+88542978 MS.gene79528:CDS
CTACTAGTATCTCTGCTAGG+TGG 0.637168 4.2:-88540936 None:intergenic
TTCATCTATGTTGACATCAG+CGG 0.638522 4.2:-88543340 None:intergenic
AGGACTAACTCAGGGGCCCG+AGG 0.638876 4.2:+88541086 MS.gene79528:CDS
GATTCTCTATGCAATGCTAG+GGG 0.641079 4.2:+88542339 MS.gene79528:CDS
CTACTAGCAGGACTAACTCA+GGG 0.641102 4.2:+88541078 MS.gene79528:CDS
TGCTTCTTCAAAATCACACA+TGG 0.645740 4.2:-88543514 None:intergenic
GCGTGGAGAAAGTGAGCGAA+TGG 0.660809 4.2:+88542254 MS.gene79528:CDS
TCAACTCCGGTAAAGAAAGG+TGG 0.662437 4.2:+88541110 MS.gene79528:CDS
CATCCATAAGGGAAGCACAA+CGG 0.667497 4.2:-88541703 None:intergenic
GGAATTAGAAGACCTTGGAA+AGG 0.669356 4.2:+88542117 MS.gene79528:CDS
CTTCCCATGGGACATAGATG+AGG 0.669966 4.2:+88542738 MS.gene79528:CDS
ATACTAGTAGAAGACCCGGA+AGG 0.671745 4.2:+88540949 MS.gene79528:CDS
ATTCTCTATGCAATGCTAGG+GGG 0.690607 4.2:+88542340 MS.gene79528:CDS
TCAAATAAGAGAATATACGA+AGG 0.694533 4.2:+88541567 MS.gene79528:CDS
AGGGGCCCGAGGATCAACTC+CGG 0.695012 4.2:+88541097 MS.gene79528:CDS
AGAGAGAAAACAATGGCCGG+TGG 0.695450 4.2:+88539557 None:intergenic
AGTGTCTTTCCAGTTCCAGG+AGG 0.734815 4.2:-88542156 None:intergenic
TACTAGCAGGACTAACTCAG+GGG 0.751310 4.2:+88541079 MS.gene79528:CDS
GAGAAAGTGAGCGAATGGTG+CGG 0.752385 4.2:+88542259 MS.gene79528:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATCAAAATAATTAAA+TGG - chr4.2:88539912-88539931 None:intergenic 10.0%
!! AAACATCAAAATAATTAAAT+GGG - chr4.2:88539911-88539930 None:intergenic 10.0%
!! TTTACTACATTATAAATAAT+GGG + chr4.2:88539744-88539763 MS.gene79528:intron 10.0%
!! TTTGTTTCATTATAAATAAT+GGG + chr4.2:88539857-88539876 MS.gene79528:intron 10.0%
!!! TTTTACTACATTATAAATAA+TGG + chr4.2:88539743-88539762 MS.gene79528:intron 10.0%
!!! TTTTGTTTCATTATAAATAA+TGG + chr4.2:88539856-88539875 MS.gene79528:intron 10.0%
!! AATTAACTTCTATTTCATAA+GGG + chr4.2:88542588-88542607 MS.gene79528:intron 15.0%
!! ATGAAATTATTATTGCTAAT+AGG + chr4.2:88541935-88541954 MS.gene79528:intron 15.0%
!! GCAATAATAATTTCATAAAT+CGG - chr4.2:88541931-88541950 None:intergenic 15.0%
!! TATTTAAAAGGATAAAACTT+AGG - chr4.2:88540231-88540250 None:intergenic 15.0%
!! TGATATTTATAGTAGAAAAT+CGG - chr4.2:88543058-88543077 None:intergenic 15.0%
!!! TGTGAATGTTTTTATTTTAT+TGG + chr4.2:88543189-88543208 MS.gene79528:intron 15.0%
!! AACAAACTTTACAATGAAAA+TGG - chr4.2:88539836-88539855 None:intergenic 20.0%
!! AATCTAATCAAGATAGTAAA+TGG + chr4.2:88540994-88541013 MS.gene79528:CDS 20.0%
!! ACAAACTTTACAATGAAAAT+GGG - chr4.2:88539835-88539854 None:intergenic 20.0%
!! ACACACATCAAAATAATTAA+TGG - chr4.2:88539810-88539829 None:intergenic 20.0%
!! ATATCTATTACTTAATGAAC+TGG - chr4.2:88542484-88542503 None:intergenic 20.0%
!! ATCTAATCAAGATAGTAAAT+GGG + chr4.2:88540995-88541014 MS.gene79528:CDS 20.0%
!! ATTCCTACGTATTATTTATT+CGG + chr4.2:88541240-88541259 MS.gene79528:intron 20.0%
!! ATTTCTTGATATCAATCAAT+TGG + chr4.2:88540393-88540412 MS.gene79528:intron 20.0%
!! ATTTCTTGATATGAATTAAG+TGG + chr4.2:88540089-88540108 MS.gene79528:intron 20.0%
!! CACACATCAAAATAATTAAT+GGG - chr4.2:88539809-88539828 None:intergenic 20.0%
!! CATTACATTAAACATGAAAT+CGG - chr4.2:88542889-88542908 None:intergenic 20.0%
!! GAATTAACTTCTATTTCATA+AGG + chr4.2:88542587-88542606 MS.gene79528:intron 20.0%
!! TAGTTTATTATAACCACAAA+AGG - chr4.2:88540180-88540199 None:intergenic 20.0%
!! TTCTCTAATCTTCATTAAAT+CGG + chr4.2:88542432-88542451 MS.gene79528:intron 20.0%
!!! GAAATTTTTTAGATGCATTT+CGG + chr4.2:88540124-88540143 MS.gene79528:intron 20.0%
!!! GAACAAACTTTAGAATAAAA+AGG - chr4.2:88539723-88539742 None:intergenic 20.0%
!!! GTATTTGTACTTTTATAGAA+TGG + chr4.2:88541525-88541544 MS.gene79528:intron 20.0%
!!! TAATTGAAGTTTTAAGTTGA+TGG + chr4.2:88540036-88540055 MS.gene79528:intron 20.0%
!!! TAGAAAGTGATAAAAACTTT+TGG + chr4.2:88542810-88542829 MS.gene79528:intron 20.0%
!!! TGTTTAAAGCTTTATTTATC+AGG + chr4.2:88543095-88543114 MS.gene79528:intron 20.0%
!!! TGTTTTTTTTTTTTCTTCCA+GGG + chr4.2:88542096-88542115 MS.gene79528:intron 20.0%
!!! TTCTTAGATAATTTTTGCTT+TGG + chr4.2:88543023-88543042 MS.gene79528:intron 20.0%
!!! TTTTATTTTATTGGAGTTGT+TGG + chr4.2:88543198-88543217 MS.gene79528:intron 20.0%
! AAATACCATTCAAAACCATA+AGG - chr4.2:88541511-88541530 None:intergenic 25.0%
! ACAGCAACACAATATTTAAA+AGG - chr4.2:88540243-88540262 None:intergenic 25.0%
! ATAACACACTGAGAAAATTA+TGG + chr4.2:88540499-88540518 MS.gene79528:intron 25.0%
! ATCTCATATATACAACACTT+TGG + chr4.2:88541981-88542000 MS.gene79528:intron 25.0%
! CAGAAGAAGTTATTCAATTA+TGG - chr4.2:88541308-88541327 None:intergenic 25.0%
! GTTGTAAGTTTCAATTTCTA+TGG + chr4.2:88541164-88541183 MS.gene79528:intron 25.0%
! TATGGATTTAAGCAAATCAT+GGG + chr4.2:88540517-88540536 MS.gene79528:intron 25.0%
! TCAAATAAGAGAATATACGA+AGG + chr4.2:88541567-88541586 MS.gene79528:CDS 25.0%
! TCATCAATGAAAATTGTACT+GGG - chr4.2:88542315-88542334 None:intergenic 25.0%
! TTATGGATTTAAGCAAATCA+TGG + chr4.2:88540516-88540535 MS.gene79528:intron 25.0%
! TTCATCAAAAATCCAATCAA+GGG - chr4.2:88541875-88541894 None:intergenic 25.0%
! TTCATCAATGAAAATTGTAC+TGG - chr4.2:88542316-88542335 None:intergenic 25.0%
! TTGAATCTCATATAACACTT+TGG + chr4.2:88542006-88542025 MS.gene79528:intron 25.0%
! TTTCATGTTTAATGTAATGC+AGG + chr4.2:88542890-88542909 MS.gene79528:intron 25.0%
!! AACTTAAAATACACCTTTTG+TGG + chr4.2:88540474-88540493 MS.gene79528:intron 25.0%
!! AACTTAAAATACTCCTTTTG+TGG + chr4.2:88540164-88540183 MS.gene79528:intron 25.0%
!! CAAAAAGAGTATAGAATGAT+GGG + chr4.2:88541378-88541397 MS.gene79528:intron 25.0%
!! TGAAATTAAGAGTATGTCTA+AGG + chr4.2:88543467-88543486 MS.gene79528:CDS 25.0%
!! TTATTCAATTATGGTTCTGT+AGG - chr4.2:88541299-88541318 None:intergenic 25.0%
!!! AGATAATTTTTGCTTTGGAA+AGG + chr4.2:88543028-88543047 MS.gene79528:intron 25.0%
!!! CTGTTTTTTTTTTTTCTTCC+AGG + chr4.2:88542095-88542114 MS.gene79528:intron 25.0%
!!! GGAGTATTTTAAGTTAAGAA+CGG - chr4.2:88540159-88540178 None:intergenic 25.0%
!!! TAGTTGATGTTTTAAGTTGA+TGG + chr4.2:88540340-88540359 MS.gene79528:intron 25.0%
!!! TTTTAAGTATGACCAAACTT+AGG + chr4.2:88540418-88540437 MS.gene79528:intron 25.0%
!!! TTTTTAACTGCTTCATTTCT+AGG + chr4.2:88542033-88542052 MS.gene79528:intron 25.0%
AAATATTCAGGCATCCATAA+GGG - chr4.2:88541717-88541736 None:intergenic 30.0%
AACGAAGATTTCGTAGAAAT+TGG - chr4.2:88540846-88540865 None:intergenic 30.0%
AAGGAAGAATTAGATGAAGT+AGG - chr4.2:88540894-88540913 None:intergenic 30.0%
AATTTGTACTCTTTCGATTC+TGG + chr4.2:88542546-88542565 MS.gene79528:intron 30.0%
ACTGTTGTGTTGTAGTTAAT+TGG + chr4.2:88540602-88540621 MS.gene79528:intron 30.0%
ACTTCTATCATCTTCTTTGA+TGG + chr4.2:88539656-88539675 MS.gene79528:CDS 30.0%
AGTCACTAAACTTACCATAA+GGG + chr4.2:88543223-88543242 MS.gene79528:intron 30.0%
ATTCTAAACTTCAGACAAGT+AGG - chr4.2:88541785-88541804 None:intergenic 30.0%
CAAAAACTATCATGTGTGAT+GGG - chr4.2:88542392-88542411 None:intergenic 30.0%
GTTCATCAAAAATCCAATCA+AGG - chr4.2:88541876-88541895 None:intergenic 30.0%
TAGTCACTAAACTTACCATA+AGG + chr4.2:88543222-88543241 MS.gene79528:intron 30.0%
TCAAAAACTATCATGTGTGA+TGG - chr4.2:88542393-88542412 None:intergenic 30.0%
TCTTTACGACTCTCAAAATT+TGG - chr4.2:88542949-88542968 None:intergenic 30.0%
TGTGTTGTAGTTAATTGGTT+TGG + chr4.2:88540607-88540626 MS.gene79528:intron 30.0%
TTAGCATTGTAACATCAAAG+AGG + chr4.2:88539942-88539961 MS.gene79528:intron 30.0%
TTGCCAACAAAACAAAAAGT+TGG + chr4.2:88543133-88543152 MS.gene79528:intron 30.0%
! AATATTGTGTTGCTGTTAGT+TGG + chr4.2:88540247-88540266 MS.gene79528:intron 30.0%
! CCAAAAAGAGTATAGAATGA+TGG + chr4.2:88541377-88541396 MS.gene79528:intron 30.0%
! CCAAGACCATTACTAATTTT+CGG - chr4.2:88542708-88542727 None:intergenic 30.0%
! CCATCATTCTATACTCTTTT+TGG - chr4.2:88541380-88541399 None:intergenic 30.0%
! CCATTCTATTAAGACTTGTT+CGG + chr4.2:88542057-88542076 MS.gene79528:intron 30.0%
! GAAGTTTAGAATTCTGATTG+TGG + chr4.2:88541793-88541812 MS.gene79528:intron 30.0%
! GTACTTTTATAGAATGGTGA+TGG + chr4.2:88541531-88541550 MS.gene79528:intron 30.0%
! TAGGATTTTCAGAGAACATT+TGG - chr4.2:88541766-88541785 None:intergenic 30.0%
! TGTATCTGAGATATCTTCAA+AGG + chr4.2:88542842-88542861 MS.gene79528:intron 30.0%
!! GCTTTATTTATCAGGATTTG+AGG + chr4.2:88543103-88543122 MS.gene79528:intron 30.0%
!!! AATTAAGTGGAGTTTTGAGT+TGG + chr4.2:88540102-88540121 MS.gene79528:intron 30.0%
!!! CATTTGTTGTTTTGTCCTTA+TGG + chr4.2:88541493-88541512 MS.gene79528:intron 30.0%
!!! GTTTTAAGTTGATGGATCTT+TGG + chr4.2:88540044-88540063 MS.gene79528:intron 30.0%
!!! TTTGTCCTTATGGTTTTGAA+TGG + chr4.2:88541503-88541522 MS.gene79528:intron 30.0%
!!! TTTTGAAGAAGCATTGGTAA+AGG + chr4.2:88543524-88543543 MS.gene79528:CDS 30.0%
AAAAACACTACTTGCCTCAA+CGG - chr4.2:88542995-88543014 None:intergenic 35.0%
AACAGTGCAACAAATGAAGA+TGG + chr4.2:88542679-88542698 MS.gene79528:CDS 35.0%
AACCAAACAAAAAGCCTCTA+AGG - chr4.2:88540451-88540470 None:intergenic 35.0%
AAGGTTACCTGGAAATATTC+AGG - chr4.2:88541729-88541748 None:intergenic 35.0%
AATTGGCTGAAATGCTTGAA+AGG + chr4.2:88541601-88541620 MS.gene79528:CDS 35.0%
AGAGCATGAATCATCTAGAA+GGG + chr4.2:88542618-88542637 MS.gene79528:CDS 35.0%
AGCAACTAGATGCAGATAAA+AGG + chr4.2:88540778-88540797 MS.gene79528:CDS 35.0%
ATAAGGGCAGTTTATTGGAA+GGG + chr4.2:88543239-88543258 MS.gene79528:intron 35.0%
ATCCATTTCGCACGAATTAA+AGG - chr4.2:88540717-88540736 None:intergenic 35.0%
ATCCTTTAATTCGTGCGAAA+TGG + chr4.2:88540712-88540731 MS.gene79528:CDS 35.0%
ATGCTTCCTTAAATGGAATG+AGG + chr4.2:88543418-88543437 MS.gene79528:CDS 35.0%
ATTCATGAAACCACTTCTCA+TGG - chr4.2:88543584-88543603 None:intergenic 35.0%
ATTGGCTGAAATGCTTGAAA+GGG + chr4.2:88541602-88541621 MS.gene79528:CDS 35.0%
CAACGGTCTTCAAATTTATC+CGG - chr4.2:88542978-88542997 None:intergenic 35.0%
CAGTGTGTTATAACCACAAA+AGG - chr4.2:88540490-88540509 None:intergenic 35.0%
CCACCGAATAAATAATACGT+AGG - chr4.2:88541246-88541265 None:intergenic 35.0%
CCGAAAATTAGTAATGGTCT+TGG + chr4.2:88542705-88542724 MS.gene79528:CDS 35.0%
CCGAACAAGTCTTAATAGAA+TGG - chr4.2:88542060-88542079 None:intergenic 35.0%
CCTACGTATTATTTATTCGG+TGG + chr4.2:88541243-88541262 MS.gene79528:intron 35.0%
GAAATATTCAGGCATCCATA+AGG - chr4.2:88541718-88541737 None:intergenic 35.0%
GAAGATTTCGTAGAAATTGG+AGG - chr4.2:88540843-88540862 None:intergenic 35.0%
GAAGTAGGATACTCATCTAA+TGG - chr4.2:88540879-88540898 None:intergenic 35.0%
GAGAAGTGGTTTCATGAATT+TGG + chr4.2:88543585-88543604 MS.gene79528:CDS 35.0%
GATAAATTTGAAGACCGTTG+AGG + chr4.2:88542978-88542997 MS.gene79528:CDS 35.0%
GCAACTAGATGCAGATAAAA+GGG + chr4.2:88540779-88540798 MS.gene79528:CDS 35.0%
GCGTTTAAAGATAACCCTAT+TGG + chr4.2:88540801-88540820 MS.gene79528:CDS 35.0%
GTCTAAGGATGAGATTTCAA+AGG + chr4.2:88543482-88543501 MS.gene79528:CDS 35.0%
GTTTAATGTAATGCAGGAGA+AGG + chr4.2:88542896-88542915 MS.gene79528:intron 35.0%
TAAGGAAATGCACCTAAGTT+TGG - chr4.2:88540433-88540452 None:intergenic 35.0%
TGATGTCAACATAGATGAAG+TGG + chr4.2:88543344-88543363 MS.gene79528:CDS 35.0%
TGATTCTCTATGCAATGCTA+GGG + chr4.2:88542338-88542357 MS.gene79528:CDS 35.0%
TGCTTCTTCAAAATCACACA+TGG - chr4.2:88543517-88543536 None:intergenic 35.0%
TGGTAGCCGAAAATTAGTAA+TGG + chr4.2:88542699-88542718 MS.gene79528:CDS 35.0%
TGTTAAGAAAGCTCTTTCTG+AGG + chr4.2:88540740-88540759 MS.gene79528:CDS 35.0%
TTAACGTTTAGACCCTTGAT+TGG + chr4.2:88541860-88541879 MS.gene79528:intron 35.0%
TTACCATAAGGGCAGTTTAT+TGG + chr4.2:88543234-88543253 MS.gene79528:intron 35.0%
TTCATCTATGTTGACATCAG+CGG - chr4.2:88543343-88543362 None:intergenic 35.0%
TTGATTCTCTATGCAATGCT+AGG + chr4.2:88542337-88542356 MS.gene79528:CDS 35.0%
TTTGAATCTCGTATGATTGC+AGG + chr4.2:88540670-88540689 MS.gene79528:intron 35.0%
! AAACTTAGGTGCTTTTCGTA+TGG - chr4.2:88540217-88540236 None:intergenic 35.0%
! CGGATTATATAGTTTGTCCT+AGG + chr4.2:88542452-88542471 MS.gene79528:intron 35.0%
! TTCCTTAGAGGCTTTTTGTT+TGG + chr4.2:88540446-88540465 MS.gene79528:intron 35.0%
! TTTGGAGTGAGAATTGTCTA+AGG - chr4.2:88541748-88541767 None:intergenic 35.0%
!! CTGCTACTTTAGCTTCTAAA+TGG + chr4.2:88542232-88542251 MS.gene79528:CDS 35.0%
!! GTGTGATTTTGAAGAAGCAT+TGG + chr4.2:88543518-88543537 MS.gene79528:CDS 35.0%
!! TCTTCTTCTTCTTGACTTGT+TGG + chr4.2:88542513-88542532 MS.gene79528:intron 35.0%
!! TTCTATTTCATAAGGGCATC+TGG + chr4.2:88542595-88542614 MS.gene79528:intron 35.0%
!!! ACGCCAACTTTTTGTTTTGT+TGG - chr4.2:88543139-88543158 None:intergenic 35.0%
AAACTACCCAAACAGTAGTC+AGG - chr4.2:88541455-88541474 None:intergenic 40.0%
AAAGCAGTTGCTACTGAATG+TGG + chr4.2:88542186-88542205 MS.gene79528:CDS 40.0%
AACATAAGGACACCTTTCCA+AGG - chr4.2:88542132-88542151 None:intergenic 40.0%
AACTACCCAAACAGTAGTCA+GGG - chr4.2:88541454-88541473 None:intergenic 40.0%
AAGCAGTTGCTACTGAATGT+GGG + chr4.2:88542187-88542206 MS.gene79528:CDS 40.0%
ACAAAGACAACAAGTACCAC+TGG + chr4.2:88541032-88541051 MS.gene79528:CDS 40.0%
ACTTAGGTGCATTTCCTTAG+AGG + chr4.2:88540434-88540453 MS.gene79528:intron 40.0%
AGAGATACTAGTAGAAGACC+CGG + chr4.2:88540945-88540964 MS.gene79528:CDS 40.0%
ATATTGAACGCCATGAGAAG+TGG + chr4.2:88543571-88543590 MS.gene79528:CDS 40.0%
ATGGATGCCTGAATATTTCC+AGG + chr4.2:88541719-88541738 MS.gene79528:CDS 40.0%
ATTCTCTATGCAATGCTAGG+GGG + chr4.2:88542340-88542359 MS.gene79528:CDS 40.0%
CAAGCATTTCAGCCAATTCA+GGG - chr4.2:88541599-88541618 None:intergenic 40.0%
CATAAGGGCAGTTTATTGGA+AGG + chr4.2:88543238-88543257 MS.gene79528:intron 40.0%
CGACTCTCAAAATTTGGAAG+AGG - chr4.2:88542943-88542962 None:intergenic 40.0%
CTTATCCCTGACTACTGTTT+GGG + chr4.2:88541446-88541465 MS.gene79528:intron 40.0%
CTTCCAATAAACTGCCCTTA+TGG - chr4.2:88543240-88543259 None:intergenic 40.0%
CTTCTACTAGTATCTCTGCT+AGG - chr4.2:88540942-88540961 None:intergenic 40.0%
CTTTCGCCTCATTCCATTTA+AGG - chr4.2:88543427-88543446 None:intergenic 40.0%
GATTCTCTATGCAATGCTAG+GGG + chr4.2:88542339-88542358 MS.gene79528:CDS 40.0%
GGAATTAGAAGACCTTGGAA+AGG + chr4.2:88542117-88542136 MS.gene79528:CDS 40.0%
TAAGGGCAGTTTATTGGAAG+GGG + chr4.2:88543240-88543259 MS.gene79528:intron 40.0%
TAATGAACTGGACACAACCT+AGG - chr4.2:88542472-88542491 None:intergenic 40.0%
TCAAAATCACACATGGCAAC+AGG - chr4.2:88543510-88543529 None:intergenic 40.0%
TCAAGCATTTCAGCCAATTC+AGG - chr4.2:88541600-88541619 None:intergenic 40.0%
TGATCGTATCATCTTGCATC+AGG + chr4.2:88543314-88543333 MS.gene79528:intron 40.0%
TGTCGTGATGCTTCCTTAAA+TGG + chr4.2:88543411-88543430 MS.gene79528:CDS 40.0%
! ACTTTAGCTTCTAAATGGCG+TGG + chr4.2:88542237-88542256 MS.gene79528:CDS 40.0%
! AGAGTCGTAAAGAGTTGATC+CGG + chr4.2:88542956-88542975 MS.gene79528:CDS 40.0%
! ATTTCTATGGAGCATTCTGC+TGG + chr4.2:88541177-88541196 MS.gene79528:intron 40.0%
! GAGAATTGTCTAAGGTTACC+TGG - chr4.2:88541740-88541759 None:intergenic 40.0%
! GAGAGCATGAATCATCTAGA+AGG + chr4.2:88542617-88542636 MS.gene79528:CDS 40.0%
! GAGGCACTAAGGTTTGTATT+TGG + chr4.2:88542757-88542776 MS.gene79528:intron 40.0%
!! AGAATGATGGGCTTTATGAG+AGG + chr4.2:88541390-88541409 MS.gene79528:intron 40.0%
!! AGAATGGTGATGGTGAAGAT+GGG + chr4.2:88541541-88541560 MS.gene79528:intron 40.0%
!! TAGAATGGTGATGGTGAAGA+TGG + chr4.2:88541540-88541559 MS.gene79528:intron 40.0%
!! TGGAAAGGTGTCCTTATGTT+TGG + chr4.2:88542132-88542151 MS.gene79528:CDS 40.0%
AAGGGTGAAGTCTGAACTTC+TGG + chr4.2:88542636-88542655 MS.gene79528:CDS 45.0%
AATGTAATGCAGGAGAAGGC+TGG + chr4.2:88542900-88542919 MS.gene79528:intron 45.0%
ATACTAGTAGAAGACCCGGA+AGG + chr4.2:88540949-88540968 MS.gene79528:CDS 45.0%
ATTTCAGCCAATTCAGGGTC+AGG - chr4.2:88541594-88541613 None:intergenic 45.0%
CTACTAGCAGGACTAACTCA+GGG + chr4.2:88541078-88541097 MS.gene79528:CDS 45.0%
CTACTAGTATCTCTGCTAGG+TGG - chr4.2:88540939-88540958 None:intergenic 45.0%
GATGCACCACCTTTCTTTAC+CGG - chr4.2:88541119-88541138 None:intergenic 45.0%
GATGTGTTAGAAACCTCTCC+TGG + chr4.2:88541624-88541643 MS.gene79528:CDS 45.0%
GCAAGAGATTACGCTCTTGA+AGG + chr4.2:88539623-88539642 MS.gene79528:CDS 45.0%
GCTTATCCCTGACTACTGTT+TGG + chr4.2:88541445-88541464 MS.gene79528:intron 45.0%
GGATCAACTCCGGTAAAGAA+AGG + chr4.2:88541107-88541126 MS.gene79528:CDS 45.0%
GTAAAGAAAGGTGGTGCATC+TGG + chr4.2:88541119-88541138 MS.gene79528:CDS 45.0%
TACTAGCAGGACTAACTCAG+GGG + chr4.2:88541079-88541098 MS.gene79528:CDS 45.0%
TACTAGTAGAAGACCCGGAA+GGG + chr4.2:88540950-88540969 MS.gene79528:CDS 45.0%
TAGAAATTGGAGGCGATGGA+GGG - chr4.2:88540833-88540852 None:intergenic 45.0%
TCAACTCCGGTAAAGAAAGG+TGG + chr4.2:88541110-88541129 MS.gene79528:CDS 45.0%
TCCAAGGTCTTCTAATTCCC+TGG - chr4.2:88542116-88542135 None:intergenic 45.0%
TCCAGGGAATTAGAAGACCT+TGG + chr4.2:88542112-88542131 MS.gene79528:intron 45.0%
TCGTATCATCTTGCATCAGG+TGG + chr4.2:88543317-88543336 MS.gene79528:intron 45.0%
TTCCAGGAGGACCAAACATA+AGG - chr4.2:88542146-88542165 None:intergenic 45.0%
TTCGTAGAAATTGGAGGCGA+TGG - chr4.2:88540837-88540856 None:intergenic 45.0%
! CAAGATAGTAAATGGGCTCG+AGG + chr4.2:88541002-88541021 MS.gene79528:CDS 45.0%
! CATCCATAAGGGAAGCACAA+CGG - chr4.2:88541706-88541725 None:intergenic 45.0%
! GTGCTGTTGCACAAATCAAC+AGG + chr4.2:88539678-88539697 MS.gene79528:CDS 45.0%
! TCTTTACCGGAGTTGATCCT+CGG - chr4.2:88541106-88541125 None:intergenic 45.0%
!! AGAAGTGTCTTTCCAGTTCC+AGG - chr4.2:88542162-88542181 None:intergenic 45.0%
!! GAACTTCTGGTTCAGGTTGA+TGG + chr4.2:88542649-88542668 MS.gene79528:CDS 45.0%
!! GAAGTCTGAACTTCTGGTTC+AGG + chr4.2:88542642-88542661 MS.gene79528:CDS 45.0%
AAACCTCTCCTGGAGTGAGA+TGG + chr4.2:88541634-88541653 MS.gene79528:CDS 50.0%
AACCTCTCCTGGAGTGAGAT+GGG + chr4.2:88541635-88541654 MS.gene79528:CDS 50.0%
AAGCCGTTGTGCTTCCCTTA+TGG + chr4.2:88541700-88541719 MS.gene79528:CDS 50.0%
ACATCATCCCATCTCACTCC+AGG - chr4.2:88541645-88541664 None:intergenic 50.0%
ACTAGTAGAAGACCCGGAAG+GGG + chr4.2:88540951-88540970 MS.gene79528:CDS 50.0%
AGTGCCTCATCTATGTCCCA+TGG - chr4.2:88542745-88542764 None:intergenic 50.0%
AGTGTCTTTCCAGTTCCAGG+AGG - chr4.2:88542159-88542178 None:intergenic 50.0%
ATGTTTGGTCCTCCTGGAAC+TGG + chr4.2:88542147-88542166 MS.gene79528:CDS 50.0%
CAATGAAGAACCACCACCAC+CGG - chr4.2:88539576-88539595 None:intergenic 50.0%
CGTCGAACTGATGGCTATAG+TGG + chr4.2:88543369-88543388 MS.gene79528:CDS 50.0%
CTTCCCATGGGACATAGATG+AGG + chr4.2:88542738-88542757 MS.gene79528:CDS 50.0%
GAGAAAGTGAGCGAATGGTG+CGG + chr4.2:88542259-88542278 MS.gene79528:CDS 50.0%
GCTACTAGCAGGACTAACTC+AGG + chr4.2:88541077-88541096 MS.gene79528:CDS 50.0%
GGAATGAGGCGAAAGATAGC+AGG + chr4.2:88543432-88543451 MS.gene79528:CDS 50.0%
GGCAGCTACTAACTTCCCAT+GGG + chr4.2:88542726-88542745 MS.gene79528:CDS 50.0%
GTAGAAATTGGAGGCGATGG+AGG - chr4.2:88540834-88540853 None:intergenic 50.0%
GTCCTTATGTTTGGTCCTCC+TGG + chr4.2:88542141-88542160 MS.gene79528:CDS 50.0%
GTGAGATGGGATGATGTTGC+AGG + chr4.2:88541648-88541667 MS.gene79528:CDS 50.0%
GTGCCTCATCTATGTCCCAT+GGG - chr4.2:88542744-88542763 None:intergenic 50.0%
TGGCAGCTACTAACTTCCCA+TGG + chr4.2:88542725-88542744 MS.gene79528:CDS 50.0%
! AACCACGCGAAAAGCACGTA+AGG + chr4.2:88540553-88540572 MS.gene79528:intron 50.0%
! CTTTACCGGAGTTGATCCTC+GGG - chr4.2:88541105-88541124 None:intergenic 50.0%
! GGGACATAGATGAGGCACTA+AGG + chr4.2:88542746-88542765 MS.gene79528:CDS 50.0%
! GGTCCAACGAAGTGTTTCTC+CGG + chr4.2:88543545-88543564 MS.gene79528:CDS 50.0%
! TTCCTTACGTGCTTTTCGCG+TGG - chr4.2:88540558-88540577 None:intergenic 50.0%
!! ATGGAGGGCGTCTTCCAATA+GGG - chr4.2:88540818-88540837 None:intergenic 50.0%
!! GGAAGCATCACGACAGACAT+TGG - chr4.2:88543406-88543425 None:intergenic 50.0%
ACAACAAGTACCACTGGCCG+TGG + chr4.2:88541038-88541057 MS.gene79528:CDS 55.0%
ATCCCATCTCACTCCAGGAG+AGG - chr4.2:88541640-88541659 None:intergenic 55.0%
CGAAGGTCCTGACCCTGAAT+TGG + chr4.2:88541584-88541603 MS.gene79528:CDS 55.0%
GAAGTGGCTCGTCGAACTGA+TGG + chr4.2:88543360-88543379 MS.gene79528:CDS 55.0%
GCGTGGAGAAAGTGAGCGAA+TGG + chr4.2:88542254-88542273 MS.gene79528:CDS 55.0%
! GGTGGTGGTTCTTCATTGGC+AGG + chr4.2:88539578-88539597 MS.gene79528:CDS 55.0%
!! CGGTGGTGGTGGTTCTTCAT+TGG + chr4.2:88539574-88539593 MS.gene79528:CDS 55.0%
!! GATGGAGGGCGTCTTCCAAT+AGG - chr4.2:88540819-88540838 None:intergenic 55.0%
ACCCACTTGACCACCCCTTC+CGG - chr4.2:88540967-88540986 None:intergenic 60.0%
AGTAGAAGACCCGGAAGGGG+TGG + chr4.2:88540954-88540973 MS.gene79528:CDS 60.0%
CCACACGTCGGGATCATCGA+AGG - chr4.2:88540913-88540932 None:intergenic 60.0%
CCTTCGATGATCCCGACGTG+TGG + chr4.2:88540910-88540929 MS.gene79528:CDS 60.0%
TCGATGATCCCGACGTGTGG+AGG + chr4.2:88540913-88540932 MS.gene79528:CDS 60.0%
!! AGGCTGGTGGTGCTACTAGC+AGG + chr4.2:88541066-88541085 MS.gene79528:CDS 60.0%
ACCCGGAAGGGGTGGTCAAG+TGG + chr4.2:88540962-88540981 MS.gene79528:CDS 65.0%
AGGACTAACTCAGGGGCCCG+AGG + chr4.2:88541086-88541105 MS.gene79528:CDS 65.0%
AGGGGCCCGAGGATCAACTC+CGG + chr4.2:88541097-88541116 MS.gene79528:CDS 65.0%
CACCACCAGCCTTTGCGCCA+CGG - chr4.2:88541058-88541077 None:intergenic 65.0%
CCCACTTGACCACCCCTTCC+GGG - chr4.2:88540966-88540985 None:intergenic 65.0%
CCCGGAAGGGGTGGTCAAGT+GGG + chr4.2:88540963-88540982 MS.gene79528:CDS 65.0%
CTAGGTGGCCTCCACACGTC+GGG - chr4.2:88540924-88540943 None:intergenic 65.0%
GCTAGGTGGCCTCCACACGT+CGG - chr4.2:88540925-88540944 None:intergenic 65.0%
TACCACTGGCCGTGGCGCAA+AGG + chr4.2:88541046-88541065 MS.gene79528:CDS 65.0%
ACTGGCCGTGGCGCAAAGGC+TGG + chr4.2:88541050-88541069 MS.gene79528:CDS 70.0%
AGCCTTTGCGCCACGGCCAG+TGG - chr4.2:88541051-88541070 None:intergenic 70.0%
GGCCGTGGCGCAAAGGCTGG+TGG + chr4.2:88541053-88541072 MS.gene79528:CDS 75.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 88539569 88543617 88539569 ID=MS.gene79528
chr4.2 mRNA 88539569 88543617 88539569 ID=MS.gene79528.t1;Parent=MS.gene79528
chr4.2 exon 88539569 88539699 88539569 ID=MS.gene79528.t1.exon1;Parent=MS.gene79528.t1
chr4.2 CDS 88539569 88539699 88539569 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
chr4.2 exon 88540692 88541166 88540692 ID=MS.gene79528.t1.exon2;Parent=MS.gene79528.t1
chr4.2 CDS 88540692 88541166 88540692 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
chr4.2 exon 88541543 88541740 88541543 ID=MS.gene79528.t1.exon3;Parent=MS.gene79528.t1
chr4.2 CDS 88541543 88541740 88541543 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
chr4.2 exon 88542117 88542361 88542117 ID=MS.gene79528.t1.exon4;Parent=MS.gene79528.t1
chr4.2 CDS 88542117 88542361 88542117 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
chr4.2 exon 88542609 88542767 88542609 ID=MS.gene79528.t1.exon5;Parent=MS.gene79528.t1
chr4.2 CDS 88542609 88542767 88542609 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
chr4.2 exon 88542912 88542999 88542912 ID=MS.gene79528.t1.exon6;Parent=MS.gene79528.t1
chr4.2 CDS 88542912 88542999 88542912 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
chr4.2 exon 88543336 88543617 88543336 ID=MS.gene79528.t1.exon7;Parent=MS.gene79528.t1
chr4.2 CDS 88543336 88543617 88543336 ID=cds.MS.gene79528.t1;Parent=MS.gene79528.t1
Gene Sequence

>MS.gene79528

ATGGCCGGTGGTGGTGGTTCTTCATTGGCAGGTTTGCAAGATCATGTGAAGTTAGCAAGAGATTACGCTCTTGAAGGTCTCTATGATACTTCTATCATCTTCTTTGATGGTGCTGTTGCACAAATCAACAGGTTCTTTACTCTTCTTTTTTCCTTTTTATTCTAAAGTTTGTTCTTTTACTACATTATAAATAATGGGTTTTGATTATTTTTGTATTTTGAGTAATTTTTGACACTACCCATTAATTATTTTGATGTGTGTTTCCCATTTTCATTGTAAAGTTTGTTTTTTGTTTCATTATAAATAATGGGTTGAAATTGTTTTTGCATTTTGACATTACCCATTTAATTATTTTGATGTTTTTTATATGAAATTAGCATTGTAACATCAAAGAGGAAAAAATGATTCACAATTGACTTGATTCATGAATGAGATGTTAGAATTCTTTGTATGTTGAATGATGACAGTAATTGAAGTTTTAAGTTGATGGATCTTTGGTTGTTTGATTATAATCAGCAACATTTCTTGATATGAATTAAGTGGAGTTTTGAGTTGGAAATTTTTTAGATGCATTTCGGATTTTCGTACCGTTCTTAACTTAAAATACTCCTTTTGTGGTTATAATAAACTATGAGTAGTTAAGAACCATACGAAAAGCACCTAAGTTTTATCCTTTTAAATATTGTGTTGCTGTTAGTTGGTTTGCTATTCTGTCAAGTAGTTGATGAGATGTTAGAACTTAGAGCTATTTTTTGTATTGAATTATAACAGTAGTTGATGTTTTAAGTTGATGGATCTTTCGACTTTTGATTATAGTTAGTAACATTTCTTGATATCAATCAATTGGAGTTTTAAGTATGACCAAACTTAGGTGCATTTCCTTAGAGGCTTTTTGTTTGGTTCTTAACTTAAAATACACCTTTTGTGGTTATAACACACTGAGAAAATTATGGATTTAAGCAAATCATGGGTAGTTAAGTTAAGAACCACGCGAAAAGCACGTAAGGAAATGCATCTAAGTTTTATAGTTTTAACTGTTGTGTTGTAGTTAATTGGTTTGGTTAATGTGCACTAGATTTGTGTTGTATTTAATTGAAGAAGTTTGAATCTCGTATGATTGCAGGCATCTAAACAGTGTTGATGATCCTTTAATTCGTGCGAAATGGATGAATGTTAAGAAAGCTCTTTCTGAGGAAACTGAAGTTGTAAAGCAACTAGATGCAGATAAAAGGGCGTTTAAAGATAACCCTATTGGAAGACGCCCTCCATCGCCTCCAATTTCTACGAAATCTTCGTTTGTTTTTCAGCCATTAGATGAGTATCCTACTTCATCTAATTCTTCCTTCGATGATCCCGACGTGTGGAGGCCACCTAGCAGAGATACTAGTAGAAGACCCGGAAGGGGTGGTCAAGTGGGTACTCGCAAATCTAATCAAGATAGTAAATGGGCTCGAGGTGCTACGACAAAGACAACAAGTACCACTGGCCGTGGCGCAAAGGCTGGTGGTGCTACTAGCAGGACTAACTCAGGGGCCCGAGGATCAACTCCGGTAAAGAAAGGTGGTGCATCTGGAAAGTCTAGCAACACAGATGCAGTTGTAAGTTTCAATTTCTATGGAGCATTCTGCTGGACTACATTTTCTTTATCACTTTTTGTTGTTACAAGAAGTTATTCCTACGTATTATTTATTCGGTGGACTCAACAAAATATTAATTATGTGTATGATCCTACAGAACCATAATTGAATAACTTCTTCTGAGCATTTTGCTTTTTTTTATTTTTTGCTCTATTTACTTTACTTTCTGATCCAAAAAGAGTATAGAATGATGGGCTTTATGAGAGGTTTCTGACACACTGCAGCATCTCTGATTATAAGCTTATCCCTGACTACTGTTTGGGTAGTTTGAAAAAACATCAAACTTGCATTTGTTGTTTTGTCCTTATGGTTTTGAATGGTATTTGTACTTTTATAGAATGGTGATGGTGAAGATGGGAAGTCAAATAAGAGAATATACGAAGGTCCTGACCCTGAATTGGCTGAAATGCTTGAAAGGGATGTGTTAGAAACCTCTCCTGGAGTGAGATGGGATGATGTTGCAGGTCTTACTGAAGCAAAAAGACTCTTAGAAGAAGCCGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGTAACCTTAGACAATTCTCACTCCAAATGTTCTCTGAAAATCCTACTTGTCTGAAGTTTAGAATTCTGATTGTGGTTTATTTGTACGAGACTGTGTAATTGTTATCATGATAGTTAGTTTTAACGTTTAGACCCTTGATTGGATTTTTGATGAACAGATCTTGCATATATTTACTTTGCAACTAAGACCGATTTATGAAATTATTATTGCTAATAGGTTCATGCTTCTCTTGTTACATGAATCTCATATATACAACACTTTGGTTTTGAATCTCATATAACACTTTGGTTTTTTTTTAACTGCTTCATTTCTAGGTCCATTCTATTAAGACTTGTTCGGTTGAGCTCATTATTTCTGTTTTTTTTTTTTCTTCCAGGGAATTAGAAGACCTTGGAAAGGTGTCCTTATGTTTGGTCCTCCTGGAACTGGAAAGACACTTCTTGCTAAAGCAGTTGCTACTGAATGTGGGACAACGTTCTTTAATGTTTCTTCTGCTACTTTAGCTTCTAAATGGCGTGGAGAAAGTGAGCGAATGGTGCGGTGTTTGTTTGATCTTGCTAGAGCTTATGCACCCAGTACAATTTTCATTGATGAAATTGATTCTCTATGCAATGCTAGGGGGTATGTCTATTTTTGCTCTTTTAGAATCCCATCACACATGATAGTTTTTGAAACTCATTTATATTTCTATTTCTCTAATCTTCATTAAATCGGATTATATAGTTTGTCCTAGGTTGTGTCCAGTTCATTAAGTAATAGATATATCTTTTTTTCTTCTTCTTCTTGACTTGTTGGCTTCACTTTGAATTTGTACTCTTTCGATTCTGGAATTGTCACAATTTAATTGAATTAACTTCTATTTCATAAGGGCATCTGGAGAGCATGAATCATCTAGAAGGGTGAAGTCTGAACTTCTGGTTCAGGTTGATGGTGTAAGCAACAGTGCAACAAATGAAGATGGTAGCCGAAAATTAGTAATGGTCTTGGCAGCTACTAACTTCCCATGGGACATAGATGAGGCACTAAGGTTTGTATTTGGTTTTCTGTGTTCTTTTCTGAACTATTTATATAGAAAGTGATAAAAACTTTTGGTTAGTTATCTGTATCTGAGATATCTTCAAAGGTAATAGTCTACACTTTCTGATCCGATTTCATGTTTAATGTAATGCAGGAGAAGGCTGGAAAAGAGAATATATATTCCTCTTCCAAATTTTGAGAGTCGTAAAGAGTTGATCCGGATAAATTTGAAGACCGTTGAGGCAAGTAGTGTTTTTTCATTATTTTCTTAGATAATTTTTGCTTTGGAAAGGTGTACCGATTTTCTACTATAAATATCATAAATTATAGTACATTATGTTTAAAGCTTTATTTATCAGGATTTGAGGATTAAAATTGCCAACAAAACAAAAAGTTGGCGTTGAGCATTTAACAAGATAGTAATATTCTTTTGTGAATGTTTTTATTTTATTGGAGTTGTTGGTTAGTCACTAAACTTACCATAAGGGCAGTTTATTGGAAGGGGTGCAGATTCACTTATGCTAAAACAATAAAACTTGATTTTTATATTTATAACTGATCGTATCATCTTGCATCAGGTGGCCGCTGATGTCAACATAGATGAAGTGGCTCGTCGAACTGATGGCTATAGTGGAGATGATTTGACCAATGTCTGTCGTGATGCTTCCTTAAATGGAATGAGGCGAAAGATAGCAGGAAAGACTCGCGATGAAATTAAGAGTATGTCTAAGGATGAGATTTCAAAGGATCCTGTTGCCATGTGTGATTTTGAAGAAGCATTGGTAAAGGTCCAACGAAGTGTTTCTCCGGCTGATATTGAACGCCATGAGAAGTGGTTTCATGAATTTGGATCAGCATAA
Protein sequence

>MS.gene79528.t1

MAGGGGSSLAGLQDHVKLARDYALEGLYDTSIIFFDGAVAQINRHLNSVDDPLIRAKWMNVKKALSEETEVVKQLDADKRAFKDNPIGRRPPSPPISTKSSFVFQPLDEYPTSSNSSFDDPDVWRPPSRDTSRRPGRGGQVGTRKSNQDSKWARGATTKTTSTTGRGAKAGGATSRTNSGARGSTPVKKGGASGKSSNTDAVNGDGEDGKSNKRIYEGPDPELAEMLERDVLETSPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSATNEDGSRKLVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAADVNIDEVARRTDGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKSMSKDEISKDPVAMCDFEEALVKVQRSVSPADIERHEKWFHEFGSA