Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79561.t1 | XP_003621262.1 | 97.9 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 1.60E-282 | 981.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79561.t1 | P58223 | 30.6 | 533 | 303 | 16 | 25 | 511 | 13 | 524 | 2.8e-49 | 198.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79561.t1 | G7L217 | 97.9 | 519 | 11 | 0 | 1 | 519 | 1 | 519 | 1.2e-282 | 981.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049193 | MS.gene79561 | 0.818433 | 1.97E-52 | -1.69E-46 |
MS.gene053143 | MS.gene79561 | 0.803102 | 4.09E-49 | -1.69E-46 |
MS.gene059007 | MS.gene79561 | 0.826016 | 3.42E-54 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene65337 | MS.gene79561 | PPI |
MS.gene79561 | MS.gene045052 | PPI |
MS.gene64896 | MS.gene79561 | PPI |
MS.gene069865 | MS.gene79561 | PPI |
MS.gene36347 | MS.gene79561 | PPI |
MS.gene85146 | MS.gene79561 | PPI |
MS.gene79559 | MS.gene79561 | PPI |
MS.gene79561 | MS.gene86533 | PPI |
MS.gene36348 | MS.gene79561 | PPI |
MS.gene021743 | MS.gene79561 | PPI |
MS.gene79561 | MS.gene72664 | PPI |
MS.gene85145 | MS.gene79561 | PPI |
MS.gene79561 | MS.gene86539 | PPI |
MS.gene79561 | MS.gene76530 | PPI |
MS.gene79561 | MS.gene070627 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79561.t1 | MTR_7g011080 | 97.810 | 548 | 12 | 0 | 1 | 548 | 1 | 548 | 0.0 | 1081 |
MS.gene79561.t1 | MTR_6g012630 | 69.455 | 550 | 150 | 9 | 1 | 546 | 1 | 536 | 0.0 | 680 |
MS.gene79561.t1 | MTR_6g012630 | 69.455 | 550 | 150 | 9 | 1 | 546 | 1 | 536 | 0.0 | 680 |
MS.gene79561.t1 | MTR_6g012630 | 70.387 | 439 | 114 | 7 | 1 | 435 | 1 | 427 | 0.0 | 566 |
MS.gene79561.t1 | MTR_6g012630 | 30.851 | 188 | 113 | 3 | 299 | 472 | 50 | 234 | 7.67e-21 | 95.9 |
MS.gene79561.t1 | MTR_2g019090 | 32.787 | 549 | 301 | 16 | 21 | 524 | 22 | 547 | 1.55e-73 | 246 |
MS.gene79561.t1 | MTR_2g019090 | 27.184 | 309 | 167 | 8 | 47 | 325 | 311 | 591 | 1.06e-23 | 105 |
MS.gene79561.t1 | MTR_2g019090 | 32.605 | 549 | 301 | 17 | 21 | 524 | 22 | 546 | 1.13e-71 | 241 |
MS.gene79561.t1 | MTR_2g019090 | 26.437 | 348 | 198 | 8 | 47 | 364 | 310 | 629 | 1.26e-26 | 114 |
MS.gene79561.t1 | MTR_3g110650 | 34.623 | 491 | 232 | 11 | 27 | 459 | 15 | 474 | 3.06e-68 | 233 |
MS.gene79561.t1 | MTR_4g093650 | 34.505 | 455 | 248 | 12 | 32 | 459 | 4 | 435 | 6.95e-65 | 223 |
MS.gene79561.t1 | MTR_4g093650 | 29.394 | 330 | 171 | 10 | 46 | 329 | 263 | 576 | 1.49e-26 | 114 |
MS.gene79561.t1 | MTR_4g008080 | 31.333 | 450 | 240 | 13 | 24 | 464 | 3 | 392 | 2.97e-54 | 193 |
MS.gene79561.t1 | MTR_3g091800 | 28.571 | 434 | 279 | 9 | 49 | 459 | 63 | 488 | 8.52e-46 | 171 |
MS.gene79561.t1 | MTR_3g091800 | 25.485 | 361 | 220 | 10 | 3 | 346 | 293 | 621 | 1.87e-20 | 95.5 |
MS.gene79561.t1 | MTR_3g091800 | 35.263 | 190 | 98 | 6 | 288 | 455 | 53 | 239 | 3.10e-19 | 91.7 |
MS.gene79561.t1 | MTR_2g009650 | 29.505 | 505 | 255 | 16 | 25 | 459 | 27 | 500 | 7.01e-45 | 169 |
MS.gene79561.t1 | MTR_5g031720 | 29.505 | 444 | 285 | 10 | 39 | 471 | 29 | 455 | 2.38e-40 | 154 |
MS.gene79561.t1 | MTR_7g082290 | 50.888 | 169 | 48 | 5 | 358 | 526 | 12 | 145 | 1.24e-32 | 124 |
MS.gene79561.t1 | MTR_7g080630 | 28.621 | 290 | 150 | 9 | 48 | 331 | 99 | 337 | 4.70e-26 | 110 |
MS.gene79561.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 299 | 483 | 103 | 292 | 9.52e-14 | 73.6 |
MS.gene79561.t1 | MTR_7g080630 | 32.979 | 188 | 109 | 4 | 48 | 231 | 99 | 273 | 4.97e-25 | 105 |
MS.gene79561.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 299 | 483 | 103 | 292 | 1.21e-13 | 72.4 |
MS.gene79561.t1 | MTR_7g080630 | 32.979 | 188 | 109 | 4 | 48 | 231 | 99 | 273 | 1.10e-24 | 105 |
MS.gene79561.t1 | MTR_7g080630 | 30.928 | 194 | 121 | 4 | 299 | 483 | 103 | 292 | 1.62e-13 | 72.0 |
MS.gene79561.t1 | MTR_1g070380 | 35.955 | 178 | 101 | 3 | 48 | 225 | 164 | 328 | 6.66e-23 | 102 |
MS.gene79561.t1 | MTR_1g070380 | 30.508 | 177 | 116 | 2 | 291 | 461 | 160 | 335 | 3.74e-15 | 79.0 |
MS.gene79561.t1 | MTR_7g115340 | 33.708 | 178 | 101 | 4 | 48 | 225 | 46 | 206 | 5.81e-22 | 99.0 |
MS.gene79561.t1 | MTR_7g115340 | 25.281 | 178 | 132 | 1 | 285 | 461 | 36 | 213 | 9.22e-16 | 80.1 |
MS.gene79561.t1 | MTR_7g115340 | 25.816 | 337 | 177 | 10 | 48 | 334 | 114 | 427 | 1.03e-21 | 99.0 |
MS.gene79561.t1 | MTR_7g115340 | 25.281 | 178 | 132 | 1 | 285 | 461 | 104 | 281 | 1.63e-15 | 79.7 |
MS.gene79561.t1 | MTR_1g070380 | 35.754 | 179 | 101 | 4 | 48 | 225 | 164 | 329 | 1.57e-21 | 98.6 |
MS.gene79561.t1 | MTR_1g070380 | 30.899 | 178 | 115 | 3 | 291 | 461 | 160 | 336 | 2.73e-14 | 75.9 |
MS.gene79561.t1 | MTR_2g038020 | 33.520 | 179 | 107 | 2 | 48 | 226 | 69 | 235 | 1.11e-20 | 95.5 |
MS.gene79561.t1 | MTR_2g038020 | 30.729 | 192 | 122 | 2 | 285 | 470 | 59 | 245 | 1.51e-17 | 85.9 |
MS.gene79561.t1 | MTR_4g127380 | 34.518 | 197 | 116 | 3 | 30 | 226 | 26 | 209 | 2.69e-20 | 94.0 |
MS.gene79561.t1 | MTR_4g127380 | 31.217 | 189 | 119 | 2 | 288 | 470 | 36 | 219 | 4.82e-15 | 77.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene79561.t1 | AT5G15270 | 60.185 | 540 | 190 | 12 | 11 | 548 | 17 | 533 | 0.0 | 620 |
MS.gene79561.t1 | AT5G15270 | 60.227 | 528 | 185 | 12 | 11 | 536 | 17 | 521 | 0.0 | 607 |
MS.gene79561.t1 | AT5G15270 | 60.227 | 528 | 185 | 12 | 11 | 536 | 17 | 521 | 0.0 | 607 |
MS.gene79561.t1 | AT1G14170 | 51.812 | 469 | 194 | 9 | 26 | 492 | 25 | 463 | 4.76e-141 | 416 |
MS.gene79561.t1 | AT1G14170 | 52.106 | 451 | 188 | 7 | 44 | 492 | 14 | 438 | 9.72e-140 | 412 |
MS.gene79561.t1 | AT1G14170 | 52.349 | 447 | 185 | 7 | 48 | 492 | 10 | 430 | 7.28e-139 | 409 |
MS.gene79561.t1 | AT5G46190 | 35.358 | 461 | 244 | 12 | 49 | 471 | 44 | 488 | 9.44e-72 | 241 |
MS.gene79561.t1 | AT5G46190 | 28.834 | 326 | 156 | 10 | 52 | 334 | 320 | 612 | 7.54e-26 | 112 |
MS.gene79561.t1 | AT5G46190 | 35.358 | 461 | 244 | 12 | 49 | 471 | 44 | 488 | 9.44e-72 | 241 |
MS.gene79561.t1 | AT5G46190 | 28.834 | 326 | 156 | 10 | 52 | 334 | 320 | 612 | 7.54e-26 | 112 |
MS.gene79561.t1 | AT5G46190 | 35.358 | 461 | 244 | 12 | 49 | 471 | 44 | 488 | 9.44e-72 | 241 |
MS.gene79561.t1 | AT5G46190 | 28.834 | 326 | 156 | 10 | 52 | 334 | 320 | 612 | 7.54e-26 | 112 |
MS.gene79561.t1 | AT5G46190 | 35.484 | 465 | 246 | 13 | 46 | 471 | 39 | 488 | 3.06e-71 | 241 |
MS.gene79561.t1 | AT5G46190 | 28.254 | 315 | 150 | 10 | 52 | 323 | 320 | 601 | 1.44e-23 | 105 |
MS.gene79561.t1 | AT4G18375 | 30.796 | 565 | 300 | 21 | 23 | 537 | 7 | 530 | 2.54e-64 | 219 |
MS.gene79561.t1 | AT4G18375 | 31.327 | 565 | 297 | 22 | 23 | 537 | 7 | 530 | 1.09e-63 | 219 |
MS.gene79561.t1 | AT4G18375 | 27.640 | 322 | 166 | 10 | 47 | 346 | 310 | 586 | 1.78e-24 | 108 |
MS.gene79561.t1 | AT1G51580 | 32.045 | 440 | 245 | 12 | 51 | 459 | 21 | 437 | 1.39e-55 | 197 |
MS.gene79561.t1 | AT1G51580 | 28.283 | 198 | 121 | 5 | 30 | 227 | 258 | 434 | 3.57e-21 | 97.8 |
MS.gene79561.t1 | AT5G53060 | 30.684 | 453 | 263 | 12 | 38 | 461 | 57 | 487 | 5.31e-52 | 187 |
MS.gene79561.t1 | AT5G53060 | 29.612 | 206 | 121 | 6 | 23 | 225 | 296 | 480 | 4.09e-17 | 85.1 |
MS.gene79561.t1 | AT5G53060 | 30.684 | 453 | 263 | 12 | 38 | 461 | 57 | 487 | 3.19e-51 | 186 |
MS.gene79561.t1 | AT5G53060 | 24.507 | 355 | 214 | 12 | 23 | 346 | 296 | 627 | 4.84e-17 | 85.1 |
MS.gene79561.t1 | AT2G03110 | 50.327 | 153 | 72 | 3 | 82 | 231 | 1 | 152 | 4.39e-39 | 140 |
MS.gene79561.t1 | AT2G03110 | 50.327 | 153 | 72 | 3 | 82 | 231 | 1 | 152 | 4.39e-39 | 140 |
MS.gene79561.t1 | AT2G03110 | 50.327 | 153 | 72 | 3 | 82 | 231 | 1 | 152 | 4.39e-39 | 140 |
MS.gene79561.t1 | AT2G22600 | 27.897 | 466 | 286 | 14 | 26 | 462 | 2 | 446 | 4.46e-33 | 134 |
MS.gene79561.t1 | AT4G18375 | 33.688 | 282 | 130 | 11 | 264 | 537 | 85 | 317 | 1.42e-29 | 120 |
MS.gene79561.t1 | AT4G18375 | 27.794 | 349 | 170 | 13 | 47 | 373 | 97 | 385 | 1.64e-25 | 108 |
MS.gene79561.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 285 | 459 | 441 | 619 | 6.63e-27 | 116 |
MS.gene79561.t1 | AT5G64390 | 34.197 | 193 | 109 | 4 | 38 | 228 | 441 | 617 | 2.43e-26 | 114 |
MS.gene79561.t1 | AT5G64390 | 32.461 | 191 | 99 | 3 | 51 | 227 | 49 | 223 | 6.37e-23 | 103 |
MS.gene79561.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 297 | 450 | 48 | 217 | 3.98e-14 | 75.9 |
MS.gene79561.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 285 | 459 | 441 | 619 | 6.75e-27 | 116 |
MS.gene79561.t1 | AT5G64390 | 34.197 | 193 | 109 | 4 | 38 | 228 | 441 | 617 | 2.41e-26 | 114 |
MS.gene79561.t1 | AT5G64390 | 32.461 | 191 | 99 | 3 | 51 | 227 | 49 | 223 | 6.21e-23 | 103 |
MS.gene79561.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 297 | 450 | 48 | 217 | 3.66e-14 | 76.3 |
MS.gene79561.t1 | AT5G64390 | 36.872 | 179 | 109 | 1 | 285 | 459 | 441 | 619 | 7.72e-27 | 115 |
MS.gene79561.t1 | AT5G64390 | 34.197 | 193 | 109 | 4 | 38 | 228 | 441 | 617 | 2.33e-26 | 114 |
MS.gene79561.t1 | AT5G64390 | 32.461 | 191 | 99 | 3 | 51 | 227 | 49 | 223 | 6.12e-23 | 103 |
MS.gene79561.t1 | AT5G64390 | 33.152 | 184 | 79 | 6 | 297 | 450 | 48 | 217 | 3.94e-14 | 75.9 |
MS.gene79561.t1 | AT5G09560 | 25.878 | 541 | 291 | 20 | 51 | 509 | 32 | 544 | 1.61e-24 | 108 |
MS.gene79561.t1 | AT5G09560 | 27.982 | 218 | 125 | 6 | 16 | 228 | 279 | 469 | 5.29e-16 | 81.6 |
MS.gene79561.t1 | AT3G04610 | 33.146 | 178 | 105 | 2 | 48 | 225 | 162 | 325 | 7.83e-24 | 105 |
MS.gene79561.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 155 | 332 | 9.71e-17 | 84.0 |
MS.gene79561.t1 | AT3G04610 | 33.146 | 178 | 105 | 2 | 48 | 225 | 162 | 325 | 7.83e-24 | 105 |
MS.gene79561.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 155 | 332 | 9.71e-17 | 84.0 |
MS.gene79561.t1 | AT3G04610 | 34.270 | 178 | 103 | 3 | 48 | 225 | 186 | 349 | 1.13e-23 | 105 |
MS.gene79561.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 179 | 356 | 1.31e-16 | 83.6 |
MS.gene79561.t1 | AT3G04610 | 34.270 | 178 | 103 | 3 | 48 | 225 | 186 | 349 | 1.13e-23 | 105 |
MS.gene79561.t1 | AT3G04610 | 27.528 | 178 | 125 | 1 | 288 | 461 | 179 | 356 | 1.31e-16 | 83.6 |
MS.gene79561.t1 | AT4G26000 | 32.022 | 178 | 109 | 2 | 48 | 225 | 73 | 238 | 1.15e-21 | 98.6 |
MS.gene79561.t1 | AT4G26000 | 32.222 | 180 | 114 | 3 | 288 | 460 | 66 | 244 | 3.96e-15 | 78.6 |
MS.gene79561.t1 | AT5G04430 | 26.299 | 308 | 168 | 12 | 28 | 331 | 17 | 269 | 6.08e-12 | 67.4 |
MS.gene79561.t1 | AT5G04430 | 26.688 | 311 | 184 | 14 | 28 | 331 | 17 | 290 | 4.02e-11 | 65.1 |
Find 170 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCGAATTGGTTGCCTTAT+TGG | 0.136643 | 7.3:-86994638 | MS.gene79561:CDS |
TCATGGTGGGGCTCCAATTA+TGG | 0.148669 | 7.3:-86995169 | MS.gene79561:CDS |
CTCTTTCACTAGCCGGTTAC+TGG | 0.187699 | 7.3:-86994669 | MS.gene79561:CDS |
TTGCTTACTTCTGCAGTTCC+TGG | 0.200050 | 7.3:-86995225 | MS.gene79561:CDS |
CTCCGATTGGTGGTGGTTAT+GGG | 0.237832 | 7.3:-86995140 | MS.gene79561:CDS |
GCTCCGATTGGTGGTGGTTA+TGG | 0.240110 | 7.3:-86995141 | MS.gene79561:CDS |
ATCGGAGCCATTCCCATAAT+TGG | 0.245633 | 7.3:+86995156 | None:intergenic |
GGAGTAGTTTCGTCGGTGTT+AGG | 0.249792 | 7.3:+86997915 | None:intergenic |
TCAGGTGGATGGAGGGGATT+TGG | 0.271531 | 7.3:-86996511 | MS.gene79561:intron |
AATCAAATTAGGCAGGATTC+TGG | 0.274868 | 7.3:-86994973 | MS.gene79561:CDS |
CTTGGTCGAGGTGGTCCTTA+TGG | 0.280832 | 7.3:-86994013 | MS.gene79561:CDS |
GCTAACATTGGAGGTGTTAT+AGG | 0.305964 | 7.3:-86995015 | MS.gene79561:CDS |
TTGATCCTCCTTTACCAATA+AGG | 0.310702 | 7.3:+86994624 | None:intergenic |
TTTGCATCTGGCGACGGTTA+TGG | 0.318019 | 7.3:-86994166 | MS.gene79561:CDS |
GAGAAAGTTGAAAGAGATTC+TGG | 0.321272 | 7.3:-86994698 | MS.gene79561:CDS |
GGCAGATTGTTCAGAATATA+AGG | 0.321391 | 7.3:-86996431 | MS.gene79561:CDS |
TGAGATTGCTGTTGTGAAAA+AGG | 0.325029 | 7.3:-86995301 | MS.gene79561:CDS |
CTTTGTCCGGTTCGCAAAAT+CGG | 0.328779 | 7.3:-86997846 | MS.gene79561:CDS |
ACGGAACGGACTAGTACTTC+TGG | 0.328930 | 7.3:-86993971 | MS.gene79561:CDS |
TGCTTACTTCTGCAGTTCCT+GGG | 0.334858 | 7.3:-86995224 | MS.gene79561:CDS |
TTGAAACCATCTGGTCCTTC+TGG | 0.338732 | 7.3:+86994265 | None:intergenic |
CGCAAAATCGGCAGCATCAT+TGG | 0.340343 | 7.3:-86997834 | MS.gene79561:CDS |
GGTGGTCCTTATGGAGCTTA+TGG | 0.351103 | 7.3:-86994004 | MS.gene79561:CDS |
GAACTCTGACGAGCTTGTTC+AGG | 0.352751 | 7.3:-86996349 | MS.gene79561:intron |
CTATCCACGGTCCATGTATC+CGG | 0.368979 | 7.3:-86995094 | MS.gene79561:CDS |
CAATGGTGGGTTCTCATGGT+GGG | 0.382167 | 7.3:-86995182 | MS.gene79561:CDS |
TAGGGAGATCCTCCTTAGAT+AGG | 0.383114 | 7.3:+86994558 | None:intergenic |
TAACATCCGCATCCTATCTA+AGG | 0.386726 | 7.3:-86994570 | MS.gene79561:CDS |
CATGGTGGGGCTCCAATTAT+GGG | 0.388437 | 7.3:-86995168 | MS.gene79561:CDS |
GTGGTATAATAAATCAAATT+AGG | 0.394131 | 7.3:-86994984 | MS.gene79561:CDS |
CCGATTGGTGGTGGTTATGG+GGG | 0.395303 | 7.3:-86995138 | MS.gene79561:CDS |
ATCAAATTAGGCAGGATTCT+GGG | 0.396448 | 7.3:-86994972 | MS.gene79561:CDS |
AACGGTAAACGGTGTCGTCT+TGG | 0.400100 | 7.3:+86997871 | None:intergenic |
CGGACAAAGGTAACGGTAAA+CGG | 0.401582 | 7.3:+86997860 | None:intergenic |
GTATGCGGCCGGTGGTTCAA+TGG | 0.406315 | 7.3:-86995199 | MS.gene79561:CDS |
TCCGATTGGTGGTGGTTATG+GGG | 0.406534 | 7.3:-86995139 | MS.gene79561:CDS |
AGGGTTACGGCGTTTGTTGT+TGG | 0.407039 | 7.3:+86997935 | None:intergenic |
TGACTGCTTAATAGCCATTT+CGG | 0.407826 | 7.3:-86994911 | MS.gene79561:CDS |
TGAAGATGAAGACGTTGATA+TGG | 0.412280 | 7.3:-86997595 | MS.gene79561:CDS |
ACGGTAAACGGTGTCGTCTT+GGG | 0.416434 | 7.3:+86997872 | None:intergenic |
TGCGCAGATTAGGATTCTTA+AGG | 0.421502 | 7.3:-86996397 | MS.gene79561:CDS |
GGCGACGGTTATGGAAACTA+TGG | 0.421841 | 7.3:-86994157 | MS.gene79561:CDS |
TTCTACCTCTCTCGCCGAAA+TGG | 0.422570 | 7.3:+86994897 | None:intergenic |
CTGCTATGGATGCGCTTGTC+AGG | 0.423616 | 7.3:-86997656 | MS.gene79561:CDS |
GTGAGACTGGTGCGCAGATT+AGG | 0.423919 | 7.3:-86996407 | MS.gene79561:CDS |
GATCAGATTGGGTGTGTGAT+TGG | 0.428636 | 7.3:-86996462 | MS.gene79561:CDS |
GAGTAGTTTCGTCGGTGTTA+GGG | 0.437592 | 7.3:+86997916 | None:intergenic |
TTTCGTCGGTGTTAGGGTTA+CGG | 0.437692 | 7.3:+86997922 | None:intergenic |
GGGTGTGTGATTGGGAAAGG+TGG | 0.439775 | 7.3:-86996453 | MS.gene79561:CDS |
TCTGGTCCTTCTGGCGAAGC+AGG | 0.442517 | 7.3:+86994274 | None:intergenic |
CGAATCGGTGAAACTGTTCC+TGG | 0.442677 | 7.3:-86997759 | MS.gene79561:CDS |
TTCAACTTTCTCACTGCACC+GGG | 0.446932 | 7.3:+86994709 | None:intergenic |
GGATGGAGGGGATTTGGTTA+CGG | 0.447187 | 7.3:-86996505 | MS.gene79561:CDS |
ATCCCTTGAGCCCGGATACA+TGG | 0.451086 | 7.3:+86995083 | None:intergenic |
TACTTGCACAAGAGCGTCCT+TGG | 0.454929 | 7.3:+86994375 | None:intergenic |
CCTTCATAGTTGAAACCATC+TGG | 0.458835 | 7.3:+86994256 | None:intergenic |
TATTCTTATTCTGATGGCTA+TGG | 0.459228 | 7.3:-86994202 | MS.gene79561:CDS |
TCGCTGAATCTGCAGATCTC+TGG | 0.459290 | 7.3:-86995324 | MS.gene79561:intron |
GTTCTTTGAGGATTCATTCT+CGG | 0.462927 | 7.3:-86994762 | MS.gene79561:CDS |
GTTATGTGAAATGTGTCTCT+TGG | 0.468813 | 7.3:+86997894 | None:intergenic |
TGAGTTTATGTGTCCTGCTA+TGG | 0.469447 | 7.3:-86997670 | MS.gene79561:CDS |
GTATTCTCTCTTTCACTAGC+CGG | 0.470671 | 7.3:-86994676 | MS.gene79561:CDS |
AAATATCAAGGTTGATAGTT+CGG | 0.471588 | 7.3:-86994947 | MS.gene79561:CDS |
GGTTCAATGGTGGGTTCTCA+TGG | 0.474828 | 7.3:-86995186 | MS.gene79561:CDS |
TTCTCACAATTCACAATGGC+TGG | 0.477989 | 7.3:-86998020 | None:intergenic |
CATTGGAGGTGTTATAGGTA+AGG | 0.479056 | 7.3:-86995010 | MS.gene79561:CDS |
CGGAACGGACTAGTACTTCT+GGG | 0.479809 | 7.3:-86993970 | MS.gene79561:CDS |
TGCAACTGAAGATGATGAAA+TGG | 0.481672 | 7.3:-86994531 | MS.gene79561:CDS |
TCAAAGCGCAAAGCGGCAGC+CGG | 0.488898 | 7.3:+86996370 | None:intergenic |
TGTGTTTATGCAGTTCTTTG+AGG | 0.490670 | 7.3:-86994774 | MS.gene79561:intron |
ATTGGTTGCCTTATTGGTAA+AGG | 0.491056 | 7.3:-86994632 | MS.gene79561:CDS |
TTTCAACTTTCTCACTGCAC+CGG | 0.491500 | 7.3:+86994708 | None:intergenic |
TGCGGCCGGTGGTTCAATGG+TGG | 0.491994 | 7.3:-86995196 | MS.gene79561:CDS |
CTGGTGTCAAGCTCTCGAAT+TGG | 0.492427 | 7.3:-86994650 | MS.gene79561:CDS |
GAGAGCTTGACACCAGTAAC+CGG | 0.492678 | 7.3:+86994657 | None:intergenic |
CTTGTGGCGTCTGATCAGAT+TGG | 0.495578 | 7.3:-86996474 | MS.gene79561:CDS |
GTTCCTGGGGTGTATGCGGC+CGG | 0.498146 | 7.3:-86995210 | MS.gene79561:CDS |
TCTTATTCTGATGGCTATGG+AGG | 0.500846 | 7.3:-86994199 | MS.gene79561:CDS |
TTGTGATGAGCGTGTTGTTA+CGG | 0.501109 | 7.3:-86997736 | MS.gene79561:CDS |
ATCAGATTGGGTGTGTGATT+GGG | 0.501919 | 7.3:-86996461 | MS.gene79561:CDS |
CGTTTACCGTTACCTTTGTC+CGG | 0.503615 | 7.3:-86997859 | MS.gene79561:CDS |
AAAGGCTCTGATTCAGGTTG+CGG | 0.503958 | 7.3:-86995283 | MS.gene79561:CDS |
TCAATGGTGGGTTCTCATGG+TGG | 0.510611 | 7.3:-86995183 | MS.gene79561:CDS |
TTGTGGCGTCTGATCAGATT+GGG | 0.517025 | 7.3:-86996473 | MS.gene79561:CDS |
TATAATAAATCAAATTAGGC+AGG | 0.519067 | 7.3:-86994980 | MS.gene79561:CDS |
TAGCAGTTGGACAAACAAAT+CGG | 0.520156 | 7.3:+86995034 | None:intergenic |
GCAGGAAGATATGCAAGTAC+TGG | 0.523882 | 7.3:+86994292 | None:intergenic |
GGTCCATGTATCCGGGCTCA+AGG | 0.524049 | 7.3:-86995086 | MS.gene79561:CDS |
CCAGATGGTTTCAACTATGA+AGG | 0.524623 | 7.3:-86994256 | MS.gene79561:CDS |
ATCGGCAGCATCATTGGCCG+CGG | 0.525073 | 7.3:-86997828 | MS.gene79561:CDS |
CATATGCGGCAGCTTGGTCG+AGG | 0.527118 | 7.3:-86994025 | MS.gene79561:intron |
GCGGCCGGTGGTTCAATGGT+GGG | 0.527583 | 7.3:-86995195 | MS.gene79561:CDS |
GGTGGCTATTCTTATTCTGA+TGG | 0.527717 | 7.3:-86994208 | MS.gene79561:CDS |
CTCTAATGTTATCAGGTGGA+TGG | 0.529172 | 7.3:-86996522 | MS.gene79561:intron |
ATGGGAATGGCTCCGATTGG+TGG | 0.530538 | 7.3:-86995150 | MS.gene79561:CDS |
TATCTTCCTGCTTCGCCAGA+AGG | 0.531028 | 7.3:-86994280 | MS.gene79561:CDS |
TTAGGATTCTTAAGGATGAC+CGG | 0.532010 | 7.3:-86996389 | MS.gene79561:CDS |
TAACTTCCATAAGCTCCATA+AGG | 0.538976 | 7.3:+86993998 | None:intergenic |
GTTTGTCCAACTGCTAACAT+TGG | 0.542273 | 7.3:-86995027 | MS.gene79561:CDS |
GGCAGCATCATTGGCCGCGG+CGG | 0.543522 | 7.3:-86997825 | MS.gene79561:CDS |
GGTGTGTGATTGGGAAAGGT+GGG | 0.544155 | 7.3:-86996452 | MS.gene79561:CDS |
GGATTCTGGGGCAAATATCA+AGG | 0.544315 | 7.3:-86994959 | MS.gene79561:CDS |
TATCCACGGTCCATGTATCC+GGG | 0.544857 | 7.3:-86995093 | MS.gene79561:CDS |
ATTGGGTGTGTGATTGGGAA+AGG | 0.547162 | 7.3:-86996456 | MS.gene79561:CDS |
CCACCGGCCGCATACACCCC+AGG | 0.549668 | 7.3:+86995207 | None:intergenic |
TATCCGGGCTCAAGGGATGA+AGG | 0.550864 | 7.3:-86995078 | MS.gene79561:CDS |
TTCAACTATGAAGGTAGAGA+TGG | 0.552487 | 7.3:-86994247 | MS.gene79561:CDS |
CTGACAAGCGCATCCATAGC+AGG | 0.554642 | 7.3:+86997657 | None:intergenic |
CAGAATATAAGGAGTGAGAC+TGG | 0.554815 | 7.3:-86996420 | MS.gene79561:CDS |
TGAAGACGTTGATATGGAGA+AGG | 0.558240 | 7.3:-86997589 | MS.gene79561:intron |
AATGGTGGGTTCTCATGGTG+GGG | 0.558992 | 7.3:-86995181 | MS.gene79561:CDS |
GAACCTTCATCCCTTGAGCC+CGG | 0.559965 | 7.3:+86995075 | None:intergenic |
GGTTGCCTTATTGGTAAAGG+AGG | 0.560805 | 7.3:-86994629 | MS.gene79561:CDS |
TCAAATTAGGCAGGATTCTG+GGG | 0.561605 | 7.3:-86994971 | MS.gene79561:CDS |
GGAATGGCTCCGATTGGTGG+TGG | 0.561692 | 7.3:-86995147 | MS.gene79561:CDS |
GTCTCTTGGAGTAGTTTCGT+CGG | 0.561776 | 7.3:+86997908 | None:intergenic |
TGGAAACTATGGAAGTTCAC+AGG | 0.562268 | 7.3:-86994146 | MS.gene79561:intron |
GCTTACTTCTGCAGTTCCTG+GGG | 0.562545 | 7.3:-86995223 | MS.gene79561:CDS |
GTCCATGTATCCGGGCTCAA+GGG | 0.574091 | 7.3:-86995085 | MS.gene79561:CDS |
ACACCTCCAATGTTAGCAGT+TGG | 0.575469 | 7.3:+86995021 | None:intergenic |
AGAACCCACCATTGAACCAC+CGG | 0.576052 | 7.3:+86995191 | None:intergenic |
CTCTTGTGCAAGTACTTACC+CGG | 0.576314 | 7.3:-86994366 | MS.gene79561:CDS |
AATAGCCATTTCGGCGAGAG+AGG | 0.578458 | 7.3:-86994902 | MS.gene79561:intron |
TGTCCAACTGCTAACATTGG+AGG | 0.579765 | 7.3:-86995024 | MS.gene79561:CDS |
ACGAAGGCGAAGATTCGAAT+CGG | 0.580163 | 7.3:-86997774 | MS.gene79561:CDS |
CTCTGATTCAGGTTGCGGCA+CGG | 0.585528 | 7.3:-86995278 | MS.gene79561:CDS |
GGTGTTATAGGTAAGGGCGG+TGG | 0.586093 | 7.3:-86995003 | MS.gene79561:CDS |
CAATCATTACTGAGATGAGA+AGG | 0.587009 | 7.3:-86994604 | MS.gene79561:CDS |
AAGGGATGAAGGTTCTCCGA+TGG | 0.587530 | 7.3:-86995067 | MS.gene79561:CDS |
TGGGGCTCCAATTATGGGAA+TGG | 0.589051 | 7.3:-86995163 | MS.gene79561:CDS |
TGCAGTTCCTGGGGTGTATG+CGG | 0.590287 | 7.3:-86995214 | MS.gene79561:CDS |
CCTGGGGTGTATGCGGCCGG+TGG | 0.591168 | 7.3:-86995207 | MS.gene79561:CDS |
ATTGGAGGTGTTATAGGTAA+GGG | 0.591478 | 7.3:-86995009 | MS.gene79561:CDS |
TAATGTTATCAGGTGGATGG+AGG | 0.591897 | 7.3:-86996519 | MS.gene79561:intron |
GGAAGATATGCAAGTACTGG+TGG | 0.592745 | 7.3:+86994295 | None:intergenic |
GTTGATAGTTCGGCAACTGA+AGG | 0.592881 | 7.3:-86994937 | MS.gene79561:CDS |
AGCAAATGTTGAGTACGTGA+AGG | 0.595406 | 7.3:+86995243 | None:intergenic |
GGTAGAGATGGAAGACGACA+TGG | 0.599304 | 7.3:-86994235 | MS.gene79561:CDS |
GGTTACGGCGAAATTGCTTG+TGG | 0.600496 | 7.3:-86996490 | MS.gene79561:CDS |
AGCTTATGGAAGTTATGCTA+CGG | 0.600781 | 7.3:-86993990 | MS.gene79561:CDS |
GCTTGTCAGGATTCATCAGA+AGG | 0.601873 | 7.3:-86997643 | MS.gene79561:CDS |
AATGTTATCAGGTGGATGGA+GGG | 0.601955 | 7.3:-86996518 | MS.gene79561:intron |
TGAAGATGATGAAATGGTGC+AGG | 0.602115 | 7.3:-86994525 | MS.gene79561:intron |
GATCCTCCTTAGATAGGATG+CGG | 0.604218 | 7.3:+86994564 | None:intergenic |
ATGCGGCAGCTTGGTCGAGG+TGG | 0.604698 | 7.3:-86994022 | MS.gene79561:intron |
CGATTGGTGGTGGTTATGGG+GGG | 0.606850 | 7.3:-86995137 | MS.gene79561:CDS |
ATTATGGGAATGGCTCCGAT+TGG | 0.609678 | 7.3:-86995153 | MS.gene79561:CDS |
CATCCGCATCCTATCTAAGG+AGG | 0.616844 | 7.3:-86994567 | MS.gene79561:CDS |
GATGGAAGACGACATGGACG+TGG | 0.622802 | 7.3:-86994229 | MS.gene79561:CDS |
TGCGAACCGGACAAAGGTAA+CGG | 0.624302 | 7.3:+86997853 | None:intergenic |
GCTGGTCAAAGAACATCCTA+CGG | 0.624883 | 7.3:-86998002 | MS.gene79561:CDS |
GCAAATGTTGAGTACGTGAA+GGG | 0.628954 | 7.3:+86995244 | None:intergenic |
GCTTCGCCAGAAGGACCAGA+TGG | 0.629484 | 7.3:-86994271 | MS.gene79561:CDS |
ATGTTATCAGGTGGATGGAG+GGG | 0.630801 | 7.3:-86996517 | MS.gene79561:intron |
GTGTGAACGTTTGTTGCCGT+AGG | 0.637858 | 7.3:+86997986 | None:intergenic |
TCATCAGAAGGTGATTGCTG+AGG | 0.638299 | 7.3:-86997631 | MS.gene79561:CDS |
ATTGCTGAGGATTTGCGTGG+TGG | 0.640532 | 7.3:-86997618 | MS.gene79561:CDS |
ACAACACGCTCATCACAACC+AGG | 0.651674 | 7.3:+86997741 | None:intergenic |
GGAAGACGACATGGACGTGG+TGG | 0.651683 | 7.3:-86994226 | MS.gene79561:CDS |
ACAACTCCGTCTTGATACGA+AGG | 0.662897 | 7.3:-86997790 | MS.gene79561:CDS |
AATCGGACTGAAAACTCCAT+CGG | 0.665768 | 7.3:+86995051 | None:intergenic |
GTGATTGCTGAGGATTTGCG+TGG | 0.679408 | 7.3:-86997621 | MS.gene79561:CDS |
GTTTCACGATCTCGCCGCCG+CGG | 0.681169 | 7.3:+86997811 | None:intergenic |
TCTTCGCCTTCGTATCAAGA+CGG | 0.684376 | 7.3:+86997784 | None:intergenic |
ATGGAAGTTATGCTACGGAA+CGG | 0.690137 | 7.3:-86993985 | MS.gene79561:CDS |
TCAACTTTCTCACTGCACCG+GGG | 0.700169 | 7.3:+86994710 | None:intergenic |
TCAGAGTTCAAAGCGCAAAG+CGG | 0.710111 | 7.3:+86996363 | None:intergenic |
GGAGGTGTTATAGGTAAGGG+CGG | 0.712082 | 7.3:-86995006 | MS.gene79561:CDS |
GTGATGTTGGAGACTATCCA+CGG | 0.725781 | 7.3:-86995107 | MS.gene79561:CDS |
GAGCCCGGATACATGGACCG+TGG | 0.743404 | 7.3:+86995090 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTAAAAAAAATTAATTTT+TGG | - | chr7.3:86994417-86994436 | MS.gene79561:intron | 0.0% |
!! | AAAGAATATGATATAATATT+TGG | - | chr7.3:86994686-86994705 | MS.gene79561:CDS | 10.0% |
!! | AATAAAAAAAATCACTTGTT+AGG | + | chr7.3:86995333-86995352 | None:intergenic | 15.0% |
!! | TTATTCAATGAATCTAAAAA+TGG | + | chr7.3:86995259-86995278 | None:intergenic | 15.0% |
!! | TTTAATTATTGTTTCATATG+CGG | - | chr7.3:86997933-86997952 | MS.gene79561:CDS | 15.0% |
!!! | AAGCTAATATTTTCAAATAA+CGG | - | chr7.3:86995978-86995997 | MS.gene79561:intron | 15.0% |
!!! | ATGTATCTAAAGTATATTAT+AGG | + | chr7.3:86995295-86995314 | None:intergenic | 15.0% |
!!! | TTTTTTTTTGCTTATAATAG+TGG | + | chr7.3:86994988-86995007 | None:intergenic | 15.0% |
!! | ACAAAATATCAGAAAGATTA+GGG | + | chr7.3:86995427-86995446 | None:intergenic | 20.0% |
!! | GTGGTATAATAAATCAAATT+AGG | - | chr7.3:86996988-86997007 | MS.gene79561:intron | 20.0% |
!! | TAAAATCCTGGAAAAATTAA+TGG | + | chr7.3:86997865-86997884 | None:intergenic | 20.0% |
!! | TATAATAAATCAAATTAGGC+AGG | - | chr7.3:86996992-86997011 | MS.gene79561:intron | 20.0% |
!! | TGAATCACAAGTAATAATAT+TGG | - | chr7.3:86995140-86995159 | MS.gene79561:CDS | 20.0% |
!!! | AATCAATTTGTTTTGTCATA+TGG | - | chr7.3:86997126-86997145 | MS.gene79561:intron | 20.0% |
!!! | ATCAATTTGTTTTGTCATAT+GGG | - | chr7.3:86997127-86997146 | MS.gene79561:intron | 20.0% |
!!! | ATTTTATGAGTTATGCTATT+GGG | - | chr7.3:86994546-86994565 | MS.gene79561:CDS | 20.0% |
!!! | TATTTTATGAGTTATGCTAT+TGG | - | chr7.3:86994545-86994564 | MS.gene79561:CDS | 20.0% |
! | AATATTTGGTATTATCGAGT+CGG | - | chr7.3:86994700-86994719 | MS.gene79561:CDS | 25.0% |
! | ACATACAACAATTTCTCATT+CGG | + | chr7.3:86996617-86996636 | None:intergenic | 25.0% |
! | ATAGCAAAGTAGAATTTGAA+CGG | - | chr7.3:86996160-86996179 | MS.gene79561:intron | 25.0% |
! | CACAAAATATCAGAAAGATT+AGG | + | chr7.3:86995428-86995447 | None:intergenic | 25.0% |
! | TTATTATAATAGTGACCAGA+GGG | - | chr7.3:86995348-86995367 | MS.gene79561:intron | 25.0% |
! | TTTATTATAATAGTGACCAG+AGG | - | chr7.3:86995347-86995366 | MS.gene79561:intron | 25.0% |
!! | ATTAAGTTGTTTATCCAAAG+TGG | + | chr7.3:86995783-86995802 | None:intergenic | 25.0% |
!! | TTACAACCATTAATTTTTCC+AGG | - | chr7.3:86997856-86997875 | MS.gene79561:CDS | 25.0% |
!! | TTCTCAATGCTTTTAGATTT+CGG | - | chr7.3:86997559-86997578 | MS.gene79561:intron | 25.0% |
!! | TTGTGATGAACCTTTTTAAT+TGG | - | chr7.3:86995657-86995676 | MS.gene79561:intron | 25.0% |
!!! | AAATATCAAGGTTGATAGTT+CGG | - | chr7.3:86997025-86997044 | MS.gene79561:intron | 25.0% |
!!! | TCAAATGATTTTGAAGATTC+TGG | - | chr7.3:86994279-86994298 | MS.gene79561:CDS | 25.0% |
!!! | TGGTTTTTTGCTTATAATAG+TGG | + | chr7.3:86995239-86995258 | None:intergenic | 25.0% |
!!! | TGTGATGAACCTTTTTAATT+GGG | - | chr7.3:86995658-86995677 | MS.gene79561:intron | 25.0% |
AATCTACAGCCCAATTAAAA+AGG | + | chr7.3:86995670-86995689 | None:intergenic | 30.0% | |
ATATTGATCATGATCCACTT+TGG | - | chr7.3:86995766-86995785 | MS.gene79561:intron | 30.0% | |
ATATTTGGTATTATCGAGTC+GGG | - | chr7.3:86994701-86994720 | MS.gene79561:CDS | 30.0% | |
ATTAGAGTTTCTCAGTGTAT+GGG | - | chr7.3:86994446-86994465 | MS.gene79561:intron | 30.0% | |
GCGTAATTCTTTAAGCTATT+TGG | - | chr7.3:86994595-86994614 | MS.gene79561:CDS | 30.0% | |
GTATTAAATAGCATCCACAT+GGG | + | chr7.3:86996191-86996210 | None:intergenic | 30.0% | |
TACGAAAACAACTTACTGTT+CGG | + | chr7.3:86996368-86996387 | None:intergenic | 30.0% | |
TATAGAGCCTCTATTTGAAT+CGG | + | chr7.3:86996450-86996469 | None:intergenic | 30.0% | |
TATTAGAGTTTCTCAGTGTA+TGG | - | chr7.3:86994445-86994464 | MS.gene79561:intron | 30.0% | |
TATTCTTATTCTGATGGCTA+TGG | - | chr7.3:86997770-86997789 | MS.gene79561:CDS | 30.0% | |
TTGTGATCTCTAATGTTATC+AGG | - | chr7.3:86995443-86995462 | MS.gene79561:intron | 30.0% | |
! | ATCAAATTTTATGCCGTGTT+TGG | - | chr7.3:86995105-86995124 | MS.gene79561:CDS | 30.0% |
! | CATCTTCAGTTGCAATTTTA+GGG | + | chr7.3:86997435-86997454 | None:intergenic | 30.0% |
! | GAGAGCAAATCTTTTTGATA+AGG | - | chr7.3:86997631-86997650 | MS.gene79561:CDS | 30.0% |
! | TCATCTTCAGTTGCAATTTT+AGG | + | chr7.3:86997436-86997455 | None:intergenic | 30.0% |
! | TCTCAATGCTTTTAGATTTC+GGG | - | chr7.3:86997560-86997579 | MS.gene79561:intron | 30.0% |
! | TTTTTGCTTATAATAGTGGC+CGG | + | chr7.3:86994984-86995003 | None:intergenic | 30.0% |
!! | TTTTTCCAGGATTTTAAGTG+CGG | - | chr7.3:86997869-86997888 | MS.gene79561:CDS | 30.0% |
!!! | AGATTGACAACATTTTTTCC+TGG | - | chr7.3:86996284-86996303 | MS.gene79561:intron | 30.0% |
!!! | TGATGTCTTTTTTGGGAAAT+CGG | - | chr7.3:86997497-86997516 | MS.gene79561:intron | 30.0% |
AAATTACTAGTTACACCCTC+TGG | + | chr7.3:86995366-86995385 | None:intergenic | 35.0% | |
AATCAAATTAGGCAGGATTC+TGG | - | chr7.3:86996999-86997018 | MS.gene79561:intron | 35.0% | |
AATGTTGTCAATCCAGATCA+CGG | + | chr7.3:86996023-86996042 | None:intergenic | 35.0% | |
ACCATCTTTGCTTACAATAG+TGG | - | chr7.3:86995016-86995035 | MS.gene79561:CDS | 35.0% | |
ACGAAAACAACTTACTGTTC+GGG | + | chr7.3:86996367-86996386 | None:intergenic | 35.0% | |
AGCTTATGGAAGTTATGCTA+CGG | - | chr7.3:86997982-86998001 | MS.gene79561:CDS | 35.0% | |
ATCAAATTAGGCAGGATTCT+GGG | - | chr7.3:86997000-86997019 | MS.gene79561:intron | 35.0% | |
ATGAGTGTTTGTGTCATGTT+TGG | - | chr7.3:86994846-86994865 | MS.gene79561:intron | 35.0% | |
CAATCATTACTGAGATGAGA+AGG | - | chr7.3:86997368-86997387 | MS.gene79561:intron | 35.0% | |
CCTGAATCAATGTTGTCAAA+TGG | - | chr7.3:86995938-86995957 | MS.gene79561:intron | 35.0% | |
CGTATTAAATAGCATCCACA+TGG | + | chr7.3:86996192-86996211 | None:intergenic | 35.0% | |
CTTCATTTGTGAAACTGTTC+AGG | + | chr7.3:86996397-86996416 | None:intergenic | 35.0% | |
GAATCAATGTTGTCAAATGG+CGG | - | chr7.3:86995941-86995960 | MS.gene79561:intron | 35.0% | |
GAGAAAGTTGAAAGAGATTC+TGG | - | chr7.3:86997274-86997293 | MS.gene79561:intron | 35.0% | |
GCTATTGAGATTGTTGAATC+TGG | - | chr7.3:86994925-86994944 | MS.gene79561:CDS | 35.0% | |
GGATTATTCAGTGTCATATC+TGG | - | chr7.3:86994567-86994586 | MS.gene79561:CDS | 35.0% | |
GGCAGATTGTTCAGAATATA+AGG | - | chr7.3:86995541-86995560 | MS.gene79561:intron | 35.0% | |
GGGCATAAGAAATGATTGAA+TGG | - | chr7.3:86997147-86997166 | MS.gene79561:intron | 35.0% | |
GTTATGTGAAATGTGTCTCT+TGG | + | chr7.3:86994081-86994100 | None:intergenic | 35.0% | |
GTTCAACCACTCATGTAAAA+TGG | + | chr7.3:86996246-86996265 | None:intergenic | 35.0% | |
TAACTTCCATAAGCTCCATA+AGG | + | chr7.3:86997977-86997996 | None:intergenic | 35.0% | |
TAGCAGTTGGACAAACAAAT+CGG | + | chr7.3:86996941-86996960 | None:intergenic | 35.0% | |
TGAAGATGAAGACGTTGATA+TGG | - | chr7.3:86994377-86994396 | MS.gene79561:CDS | 35.0% | |
TGACTGCTTAATAGCCATTT+CGG | - | chr7.3:86997061-86997080 | MS.gene79561:intron | 35.0% | |
TGATCTCTAATGTTATCAGG+TGG | - | chr7.3:86995446-86995465 | MS.gene79561:intron | 35.0% | |
TGCAACTGAAGATGATGAAA+TGG | - | chr7.3:86997441-86997460 | MS.gene79561:intron | 35.0% | |
TGCTTATAATAGTGGCCATA+GGG | + | chr7.3:86994980-86994999 | None:intergenic | 35.0% | |
TGTGTTTATGCAGTTCTTTG+AGG | - | chr7.3:86997198-86997217 | MS.gene79561:intron | 35.0% | |
TTAGGATTCTTAAGGATGAC+CGG | - | chr7.3:86995583-86995602 | MS.gene79561:intron | 35.0% | |
TTATAATTCACTCACAGACG+CGG | + | chr7.3:86994875-86994894 | None:intergenic | 35.0% | |
TTCAACTATGAAGGTAGAGA+TGG | - | chr7.3:86997725-86997744 | MS.gene79561:CDS | 35.0% | |
TTGATCCTCCTTTACCAATA+AGG | + | chr7.3:86997351-86997370 | None:intergenic | 35.0% | |
TTGCTTATAATAGTGGCCAT+AGG | + | chr7.3:86994981-86995000 | None:intergenic | 35.0% | |
! | AAACCACCATTTTACATGAG+TGG | - | chr7.3:86996237-86996256 | MS.gene79561:intron | 35.0% |
! | AAATGAGCCGATTCAAATAG+AGG | - | chr7.3:86996440-86996459 | MS.gene79561:CDS | 35.0% |
! | ACATTTTCCTGGAGAGTTTA+TGG | - | chr7.3:86996038-86996057 | MS.gene79561:intron | 35.0% |
! | ATTGGTTGCCTTATTGGTAA+AGG | - | chr7.3:86997340-86997359 | MS.gene79561:intron | 35.0% |
! | CTCAATGCTTTTAGATTTCG+GGG | - | chr7.3:86997561-86997580 | MS.gene79561:intron | 35.0% |
! | GTTCTTTGAGGATTCATTCT+CGG | - | chr7.3:86997210-86997229 | MS.gene79561:intron | 35.0% |
! | TCAATGCTTTTAGATTTCGG+GGG | - | chr7.3:86997562-86997581 | MS.gene79561:intron | 35.0% |
! | TGAGATTGCTGTTGTGAAAA+AGG | - | chr7.3:86996671-86996690 | MS.gene79561:intron | 35.0% |
!! | ATTGGAGGTGTTATAGGTAA+GGG | - | chr7.3:86996963-86996982 | MS.gene79561:intron | 35.0% |
!! | CCATTTGACAACATTGATTC+AGG | + | chr7.3:86995941-86995960 | None:intergenic | 35.0% |
!! | GTTGTTTTCATAAGTTGTCC+TGG | - | chr7.3:86996091-86996110 | MS.gene79561:intron | 35.0% |
!!! | CATTTTTTCCTGGAGAGTTA+TGG | - | chr7.3:86996294-86996313 | MS.gene79561:intron | 35.0% |
!!! | GCTTGAGTGATGTCTTTTTT+GGG | - | chr7.3:86997490-86997509 | MS.gene79561:intron | 35.0% |
!!! | TGCTTGAGTGATGTCTTTTT+TGG | - | chr7.3:86997489-86997508 | MS.gene79561:intron | 35.0% |
AATCGGACTGAAAACTCCAT+CGG | + | chr7.3:86996924-86996943 | None:intergenic | 40.0% | |
AATGTTATCAGGTGGATGGA+GGG | - | chr7.3:86995454-86995473 | MS.gene79561:intron | 40.0% | |
ACAGACATGAACACCAAACA+CGG | + | chr7.3:86995121-86995140 | None:intergenic | 40.0% | |
ACTTACTTCCATAACTCTCC+AGG | + | chr7.3:86996305-86996324 | None:intergenic | 40.0% | |
AGCAAATGTTGAGTACGTGA+AGG | + | chr7.3:86996732-86996751 | None:intergenic | 40.0% | |
ATCAGATTGGGTGTGTGATT+GGG | - | chr7.3:86995511-86995530 | MS.gene79561:intron | 40.0% | |
ATGGAAGTTATGCTACGGAA+CGG | - | chr7.3:86997987-86998006 | MS.gene79561:CDS | 40.0% | |
CAACCACTCATGTAAAATGG+TGG | + | chr7.3:86996243-86996262 | None:intergenic | 40.0% | |
CAGAATATAAGGAGTGAGAC+TGG | - | chr7.3:86995552-86995571 | MS.gene79561:intron | 40.0% | |
CCAGATGGTTTCAACTATGA+AGG | - | chr7.3:86997716-86997735 | MS.gene79561:CDS | 40.0% | |
CCTTCATAGTTGAAACCATC+TGG | + | chr7.3:86997719-86997738 | None:intergenic | 40.0% | |
CTCTAATGTTATCAGGTGGA+TGG | - | chr7.3:86995450-86995469 | MS.gene79561:intron | 40.0% | |
CTTACTTCCATAAACTCTCC+AGG | + | chr7.3:86996048-86996067 | None:intergenic | 40.0% | |
GAGATTGTTGAATCTGGTGT+CGG | - | chr7.3:86994931-86994950 | MS.gene79561:CDS | 40.0% | |
GCAAATGTTGAGTACGTGAA+GGG | + | chr7.3:86996731-86996750 | None:intergenic | 40.0% | |
GCCACTATTGTAAGCAAAGA+TGG | + | chr7.3:86995020-86995039 | None:intergenic | 40.0% | |
GGATTATTGTCTGTGTGATG+AGG | - | chr7.3:86994616-86994635 | MS.gene79561:CDS | 40.0% | |
GGTGGCTATTCTTATTCTGA+TGG | - | chr7.3:86997764-86997783 | MS.gene79561:CDS | 40.0% | |
GTATTCTCTCTTTCACTAGC+CGG | - | chr7.3:86997296-86997315 | MS.gene79561:intron | 40.0% | |
GTTGTCAATCTCACCCAAAA+TGG | + | chr7.3:86996275-86996294 | None:intergenic | 40.0% | |
GTTTGTCCAACTGCTAACAT+TGG | - | chr7.3:86996945-86996964 | MS.gene79561:intron | 40.0% | |
TAACATCCGCATCCTATCTA+AGG | - | chr7.3:86997402-86997421 | MS.gene79561:intron | 40.0% | |
TAATGTTATCAGGTGGATGG+AGG | - | chr7.3:86995453-86995472 | MS.gene79561:intron | 40.0% | |
TCAAATTAGGCAGGATTCTG+GGG | - | chr7.3:86997001-86997020 | MS.gene79561:intron | 40.0% | |
TCAATCCAGATCACGGAAAA+TGG | + | chr7.3:86996016-86996035 | None:intergenic | 40.0% | |
TCTCGAATTGGTTGCCTTAT+TGG | - | chr7.3:86997334-86997353 | MS.gene79561:intron | 40.0% | |
TCTTATTCTGATGGCTATGG+AGG | - | chr7.3:86997773-86997792 | MS.gene79561:CDS | 40.0% | |
TGAAGACGTTGATATGGAGA+AGG | - | chr7.3:86994383-86994402 | MS.gene79561:CDS | 40.0% | |
TGAAGATGATGAAATGGTGC+AGG | - | chr7.3:86997447-86997466 | MS.gene79561:intron | 40.0% | |
TGAGTTTATGTGTCCTGCTA+TGG | - | chr7.3:86994302-86994321 | MS.gene79561:CDS | 40.0% | |
TGCGCAGATTAGGATTCTTA+AGG | - | chr7.3:86995575-86995594 | MS.gene79561:intron | 40.0% | |
TGCTTACAATAGTGGCTGTA+GGG | - | chr7.3:86995024-86995043 | MS.gene79561:CDS | 40.0% | |
TGGAAACTATGGAAGTTCAC+AGG | - | chr7.3:86997826-86997845 | MS.gene79561:CDS | 40.0% | |
TTGCTTACAATAGTGGCTGT+AGG | - | chr7.3:86995023-86995042 | MS.gene79561:CDS | 40.0% | |
TTTCAACTTTCTCACTGCAC+CGG | + | chr7.3:86997267-86997286 | None:intergenic | 40.0% | |
! | AAAAAGATTTGCTCTCAGCC+GGG | + | chr7.3:86997627-86997646 | None:intergenic | 40.0% |
! | CAAAAAGATTTGCTCTCAGC+CGG | + | chr7.3:86997628-86997647 | None:intergenic | 40.0% |
! | CTGGATTGACAACATTTTCC+TGG | - | chr7.3:86996027-86996046 | MS.gene79561:intron | 40.0% |
! | TGATGATGTTGACATGTCGA+AGG | - | chr7.3:86994656-86994675 | MS.gene79561:CDS | 40.0% |
! | TGTGAAAAAGGCTCTGATTC+AGG | - | chr7.3:86996683-86996702 | MS.gene79561:intron | 40.0% |
! | TTGTGATGAGCGTGTTGTTA+CGG | - | chr7.3:86994236-86994255 | MS.gene79561:CDS | 40.0% |
!! | CATTGGAGGTGTTATAGGTA+AGG | - | chr7.3:86996962-86996981 | MS.gene79561:intron | 40.0% |
!! | GCTAACATTGGAGGTGTTAT+AGG | - | chr7.3:86996957-86996976 | MS.gene79561:intron | 40.0% |
!! | GTTGAACAAACCGCCATTTT+GGG | - | chr7.3:86996259-86996278 | MS.gene79561:intron | 40.0% |
!! | TACGAAGTGTTGTCAAACAG+TGG | - | chr7.3:86996208-86996227 | MS.gene79561:intron | 40.0% |
AATAGTGGCTGTAGGGTGTA+TGG | - | chr7.3:86995031-86995050 | MS.gene79561:CDS | 45.0% | |
ACAACTCCGTCTTGATACGA+AGG | - | chr7.3:86994182-86994201 | MS.gene79561:CDS | 45.0% | |
ACACCTCCAATGTTAGCAGT+TGG | + | chr7.3:86996954-86996973 | None:intergenic | 45.0% | |
ACGAAGGCGAAGATTCGAAT+CGG | - | chr7.3:86994198-86994217 | MS.gene79561:CDS | 45.0% | |
ATCGGAGCCATTCCCATAAT+TGG | + | chr7.3:86996819-86996838 | None:intergenic | 45.0% | |
ATGATGAAATGGTGCAGGTG+AGG | - | chr7.3:86997452-86997471 | MS.gene79561:intron | 45.0% | |
ATGTTATCAGGTGGATGGAG+GGG | - | chr7.3:86995455-86995474 | MS.gene79561:intron | 45.0% | |
ATTATGGGAATGGCTCCGAT+TGG | - | chr7.3:86996819-86996838 | MS.gene79561:intron | 45.0% | |
ATTGGGTGTGTGATTGGGAA+AGG | - | chr7.3:86995516-86995535 | MS.gene79561:intron | 45.0% | |
CGTTTACCGTTACCTTTGTC+CGG | - | chr7.3:86994113-86994132 | MS.gene79561:intron | 45.0% | |
CTCATCCGCACTTAAAATCC+TGG | + | chr7.3:86997877-86997896 | None:intergenic | 45.0% | |
CTCTTGTGCAAGTACTTACC+CGG | - | chr7.3:86997606-86997625 | MS.gene79561:CDS | 45.0% | |
GATCAGATTGGGTGTGTGAT+TGG | - | chr7.3:86995510-86995529 | MS.gene79561:intron | 45.0% | |
GATCCTCCTTAGATAGGATG+CGG | + | chr7.3:86997411-86997430 | None:intergenic | 45.0% | |
GATGAGGATGATGTGTGATG+AGG | - | chr7.3:86994632-86994651 | MS.gene79561:CDS | 45.0% | |
GCAGGAAGATATGCAAGTAC+TGG | + | chr7.3:86997683-86997702 | None:intergenic | 45.0% | |
GCTGGTCAAAGAACATCCTA+CGG | - | chr7.3:86993970-86993989 | MS.gene79561:CDS | 45.0% | |
GCTTGTCAGGATTCATCAGA+AGG | - | chr7.3:86994329-86994348 | MS.gene79561:CDS | 45.0% | |
GTCAATCTCACCCAAAATGG+CGG | + | chr7.3:86996272-86996291 | None:intergenic | 45.0% | |
GTCTCTTGGAGTAGTTTCGT+CGG | + | chr7.3:86994067-86994086 | None:intergenic | 45.0% | |
GTGATGTTGGAGACTATCCA+CGG | - | chr7.3:86996865-86996884 | MS.gene79561:intron | 45.0% | |
TAGGGAGATCCTCCTTAGAT+AGG | + | chr7.3:86997417-86997436 | None:intergenic | 45.0% | |
TCAGAGTTCAAAGCGCAAAG+CGG | + | chr7.3:86995612-86995631 | None:intergenic | 45.0% | |
TCATCAGAAGGTGATTGCTG+AGG | - | chr7.3:86994341-86994360 | MS.gene79561:CDS | 45.0% | |
TCTGCTGTCTGTGTCTGTAA+CGG | - | chr7.3:86995194-86995213 | MS.gene79561:CDS | 45.0% | |
TCTTCGCCTTCGTATCAAGA+CGG | + | chr7.3:86994191-86994210 | None:intergenic | 45.0% | |
TGATGTTGACATGTCGAAGG+TGG | - | chr7.3:86994659-86994678 | MS.gene79561:CDS | 45.0% | |
TGCTTACTTCTGCAGTTCCT+GGG | - | chr7.3:86996748-86996767 | MS.gene79561:intron | 45.0% | |
TGTCCAACTGCTAACATTGG+AGG | - | chr7.3:86996948-86996967 | MS.gene79561:intron | 45.0% | |
TTCAACTTTCTCACTGCACC+GGG | + | chr7.3:86997266-86997285 | None:intergenic | 45.0% | |
TTGAAACCATCTGGTCCTTC+TGG | + | chr7.3:86997710-86997729 | None:intergenic | 45.0% | |
TTGCTTACTTCTGCAGTTCC+TGG | - | chr7.3:86996747-86996766 | MS.gene79561:intron | 45.0% | |
TTGCTTATAATAGTGGCCGG+AGG | + | chr7.3:86995232-86995251 | None:intergenic | 45.0% | |
TTGTCAAATGGCGGCTATTG+CGG | - | chr7.3:86995950-86995969 | MS.gene79561:intron | 45.0% | |
TTGTGGCGTCTGATCAGATT+GGG | - | chr7.3:86995499-86995518 | MS.gene79561:intron | 45.0% | |
TTGTTTCATATGCGGCAGCT+TGG | - | chr7.3:86997941-86997960 | MS.gene79561:CDS | 45.0% | |
! | AGTGATTTTGCATCTGGCGA+CGG | - | chr7.3:86997800-86997819 | MS.gene79561:CDS | 45.0% |
! | CGGACAAAGGTAACGGTAAA+CGG | + | chr7.3:86994115-86994134 | None:intergenic | 45.0% |
! | CTTTGTCCGGTTCGCAAAAT+CGG | - | chr7.3:86994126-86994145 | MS.gene79561:intron | 45.0% |
! | GGACTAGTACTTCTGGGTAA+AGG | - | chr7.3:86998008-86998027 | MS.gene79561:CDS | 45.0% |
! | GGCTCAAGTGATTTTGCATC+TGG | - | chr7.3:86997794-86997813 | MS.gene79561:CDS | 45.0% |
! | GGTTGAACAAACCGCCATTT+TGG | - | chr7.3:86996258-86996277 | MS.gene79561:intron | 45.0% |
! | GGTTGCCTTATTGGTAAAGG+AGG | - | chr7.3:86997343-86997362 | MS.gene79561:intron | 45.0% |
!! | AAAGGCTCTGATTCAGGTTG+CGG | - | chr7.3:86996689-86996708 | MS.gene79561:intron | 45.0% |
!! | GAGTAGTTTCGTCGGTGTTA+GGG | + | chr7.3:86994059-86994078 | None:intergenic | 45.0% |
!! | GGAAGATATGCAAGTACTGG+TGG | + | chr7.3:86997680-86997699 | None:intergenic | 45.0% |
!! | GGATTCTGGGGCAAATATCA+AGG | - | chr7.3:86997013-86997032 | MS.gene79561:intron | 45.0% |
!! | GTTGATAGTTCGGCAACTGA+AGG | - | chr7.3:86997035-86997054 | MS.gene79561:intron | 45.0% |
!! | TTTCGTCGGTGTTAGGGTTA+CGG | + | chr7.3:86994053-86994072 | None:intergenic | 45.0% |
!! | TTTGAACGGATTGTCCCATG+TGG | - | chr7.3:86996174-86996193 | MS.gene79561:intron | 45.0% |
!!! | AACTGCCATTTTCCGTGATC+TGG | - | chr7.3:86996008-86996027 | MS.gene79561:intron | 45.0% |
AAGGGATGAAGGTTCTCCGA+TGG | - | chr7.3:86996905-86996924 | MS.gene79561:intron | 50.0% | |
AATAGCCATTTCGGCGAGAG+AGG | - | chr7.3:86997070-86997089 | MS.gene79561:intron | 50.0% | |
ACAACACGCTCATCACAACC+AGG | + | chr7.3:86994234-86994253 | None:intergenic | 50.0% | |
ACGGTGATTCGTACACCCTA+TGG | - | chr7.3:86994962-86994981 | MS.gene79561:CDS | 50.0% | |
ACGGTGGTTCATACATCCTC+CGG | - | chr7.3:86995213-86995232 | MS.gene79561:CDS | 50.0% | |
AGAACCCACCATTGAACCAC+CGG | + | chr7.3:86996784-86996803 | None:intergenic | 50.0% | |
ATTGCTGAGGATTTGCGTGG+TGG | - | chr7.3:86994354-86994373 | MS.gene79561:CDS | 50.0% | |
CATCCGCATCCTATCTAAGG+AGG | - | chr7.3:86997405-86997424 | MS.gene79561:intron | 50.0% | |
CCACGACACAGACACAAACA+CGG | + | chr7.3:86994485-86994504 | None:intergenic | 50.0% | |
CGAATCGGTGAAACTGTTCC+TGG | - | chr7.3:86994213-86994232 | MS.gene79561:CDS | 50.0% | |
CGCAAAATCGGCAGCATCAT+TGG | - | chr7.3:86994138-86994157 | MS.gene79561:intron | 50.0% | |
CGTGTTTGTGTCTGTGTCGT+GGG | - | chr7.3:86994483-86994502 | MS.gene79561:intron | 50.0% | |
CTATCCACGGTCCATGTATC+CGG | - | chr7.3:86996878-86996897 | MS.gene79561:intron | 50.0% | |
CTCAGTGTATGGGTCGTGTT+TGG | - | chr7.3:86994456-86994475 | MS.gene79561:intron | 50.0% | |
CTCTTTCACTAGCCGGTTAC+TGG | - | chr7.3:86997303-86997322 | MS.gene79561:intron | 50.0% | |
CTTGTGGCGTCTGATCAGAT+TGG | - | chr7.3:86995498-86995517 | MS.gene79561:intron | 50.0% | |
GAGAGCTTGACACCAGTAAC+CGG | + | chr7.3:86997318-86997337 | None:intergenic | 50.0% | |
GCTTACTTCTGCAGTTCCTG+GGG | - | chr7.3:86996749-86996768 | MS.gene79561:intron | 50.0% | |
GCTTGACAACACTAAGCTCC+AGG | + | chr7.3:86996112-86996131 | None:intergenic | 50.0% | |
GGCGACGGTTATGGAAACTA+TGG | - | chr7.3:86997815-86997834 | MS.gene79561:CDS | 50.0% | |
GGGGGAACTAGATATTGCCA+AGG | - | chr7.3:86997580-86997599 | MS.gene79561:intron | 50.0% | |
GGTAGAGATGGAAGACGACA+TGG | - | chr7.3:86997737-86997756 | MS.gene79561:CDS | 50.0% | |
GGTGGTCCTTATGGAGCTTA+TGG | - | chr7.3:86997968-86997987 | MS.gene79561:CDS | 50.0% | |
GGTGTGTGATTGGGAAAGGT+GGG | - | chr7.3:86995520-86995539 | MS.gene79561:intron | 50.0% | |
GGTTACGGCGAAATTGCTTG+TGG | - | chr7.3:86995482-86995501 | MS.gene79561:intron | 50.0% | |
GTGATTGCTGAGGATTTGCG+TGG | - | chr7.3:86994351-86994370 | MS.gene79561:CDS | 50.0% | |
TATCCACGGTCCATGTATCC+GGG | - | chr7.3:86996879-86996898 | MS.gene79561:intron | 50.0% | |
TATCTTCCTGCTTCGCCAGA+AGG | - | chr7.3:86997692-86997711 | MS.gene79561:CDS | 50.0% | |
TCAACTTTCTCACTGCACCG+GGG | + | chr7.3:86997265-86997284 | None:intergenic | 50.0% | |
TCGCTGAATCTGCAGATCTC+TGG | - | chr7.3:86996648-86996667 | MS.gene79561:intron | 50.0% | |
TGCGAACCGGACAAAGGTAA+CGG | + | chr7.3:86994122-86994141 | None:intergenic | 50.0% | |
TGGGGCTCCAATTATGGGAA+TGG | - | chr7.3:86996809-86996828 | MS.gene79561:intron | 50.0% | |
TTCTACCTCTCTCGCCGAAA+TGG | + | chr7.3:86997078-86997097 | None:intergenic | 50.0% | |
TTTGCATCTGGCGACGGTTA+TGG | - | chr7.3:86997806-86997825 | MS.gene79561:CDS | 50.0% | |
! | ATCAGTGCTGCTGACGTGTT+CGG | - | chr7.3:86994755-86994774 | MS.gene79561:CDS | 50.0% |
! | CATGGTGGGGCTCCAATTAT+GGG | - | chr7.3:86996804-86996823 | MS.gene79561:intron | 50.0% |
! | CGATTTTGCGAACCGGACAA+AGG | + | chr7.3:86994128-86994147 | None:intergenic | 50.0% |
! | CTGGTGTCAAGCTCTCGAAT+TGG | - | chr7.3:86997322-86997341 | MS.gene79561:intron | 50.0% |
! | GAACTCTGACGAGCTTGTTC+AGG | - | chr7.3:86995623-86995642 | MS.gene79561:intron | 50.0% |
! | GGAGTAGTTTCGTCGGTGTT+AGG | + | chr7.3:86994060-86994079 | None:intergenic | 50.0% |
! | GGATGGAGGGGATTTGGTTA+CGG | - | chr7.3:86995467-86995486 | MS.gene79561:intron | 50.0% |
! | GGGGGGTATAAAGGTGATGT+TGG | - | chr7.3:86996852-86996871 | MS.gene79561:intron | 50.0% |
! | GGTGGTTATGGGGGGTATAA+AGG | - | chr7.3:86996843-86996862 | MS.gene79561:intron | 50.0% |
! | GTGTGAACGTTTGTTGCCGT+AGG | + | chr7.3:86993989-86994008 | None:intergenic | 50.0% |
! | TCATGGTGGGGCTCCAATTA+TGG | - | chr7.3:86996803-86996822 | MS.gene79561:intron | 50.0% |
!! | AACGGTAAACGGTGTCGTCT+TGG | + | chr7.3:86994104-86994123 | None:intergenic | 50.0% |
!! | AATGGTGGGTTCTCATGGTG+GGG | - | chr7.3:86996791-86996810 | MS.gene79561:intron | 50.0% |
!! | ACGGAACGGACTAGTACTTC+TGG | - | chr7.3:86998001-86998020 | MS.gene79561:CDS | 50.0% |
!! | ACGGTAAACGGTGTCGTCTT+GGG | + | chr7.3:86994103-86994122 | None:intergenic | 50.0% |
!! | AGGGTTACGGCGTTTGTTGT+TGG | + | chr7.3:86994040-86994059 | None:intergenic | 50.0% |
!! | CAATGGTGGGTTCTCATGGT+GGG | - | chr7.3:86996790-86996809 | MS.gene79561:intron | 50.0% |
!! | CGGAACGGACTAGTACTTCT+GGG | - | chr7.3:86998002-86998021 | MS.gene79561:CDS | 50.0% |
!! | CTCCGATTGGTGGTGGTTAT+GGG | - | chr7.3:86996832-86996851 | MS.gene79561:intron | 50.0% |
!! | GGAGGTGTTATAGGTAAGGG+CGG | - | chr7.3:86996966-86996985 | MS.gene79561:intron | 50.0% |
!! | GGTTCAATGGTGGGTTCTCA+TGG | - | chr7.3:86996786-86996805 | MS.gene79561:intron | 50.0% |
!! | TACTTGCACAAGAGCGTCCT+TGG | + | chr7.3:86997600-86997619 | None:intergenic | 50.0% |
!! | TCAATGGTGGGTTCTCATGG+TGG | - | chr7.3:86996789-86996808 | MS.gene79561:intron | 50.0% |
!! | TCCGATTGGTGGTGGTTATG+GGG | - | chr7.3:86996833-86996852 | MS.gene79561:intron | 50.0% |
!! | TCTGGTGTCGGTGTTTGTGA+CGG | - | chr7.3:86994943-86994962 | MS.gene79561:CDS | 50.0% |
!!! | ATGCTGCCGATTTTGCGAAC+CGG | + | chr7.3:86994135-86994154 | None:intergenic | 50.0% |
ATCCCTTGAGCCCGGATACA+TGG | + | chr7.3:86996892-86996911 | None:intergenic | 55.0% | |
ATGGGAATGGCTCCGATTGG+TGG | - | chr7.3:86996822-86996841 | MS.gene79561:intron | 55.0% | |
CCCCCATAACCACCACCAAT+CGG | + | chr7.3:86996837-86996856 | None:intergenic | 55.0% | |
CCGTGTTTGTGTCTGTGTCG+TGG | - | chr7.3:86994482-86994501 | MS.gene79561:intron | 55.0% | |
CTGACAAGCGCATCCATAGC+AGG | + | chr7.3:86994318-86994337 | None:intergenic | 55.0% | |
CTGCTATGGATGCGCTTGTC+AGG | - | chr7.3:86994316-86994335 | MS.gene79561:CDS | 55.0% | |
GAACCTTCATCCCTTGAGCC+CGG | + | chr7.3:86996900-86996919 | None:intergenic | 55.0% | |
GATGGAAGACGACATGGACG+TGG | - | chr7.3:86997743-86997762 | MS.gene79561:CDS | 55.0% | |
GCTGTCTGTGTCTGTAACGG+TGG | - | chr7.3:86995197-86995216 | MS.gene79561:CDS | 55.0% | |
GGGTGTGTGATTGGGAAAGG+TGG | - | chr7.3:86995519-86995538 | MS.gene79561:intron | 55.0% | |
GTCCATGTATCCGGGCTCAA+GGG | - | chr7.3:86996887-86996906 | MS.gene79561:intron | 55.0% | |
GTGAGACTGGTGCGCAGATT+AGG | - | chr7.3:86995565-86995584 | MS.gene79561:intron | 55.0% | |
TATCCGGGCTCAAGGGATGA+AGG | - | chr7.3:86996894-86996913 | MS.gene79561:intron | 55.0% | |
TCAGGTGGATGGAGGGGATT+TGG | - | chr7.3:86995461-86995480 | MS.gene79561:intron | 55.0% | |
TGCAGTTCCTGGGGTGTATG+CGG | - | chr7.3:86996758-86996777 | MS.gene79561:intron | 55.0% | |
! | CAGCTGTGCTTTTGCAACCC+CGG | - | chr7.3:86997245-86997264 | MS.gene79561:intron | 55.0% |
! | GGTGTTATAGGTAAGGGCGG+TGG | - | chr7.3:86996969-86996988 | MS.gene79561:intron | 55.0% |
!! | CCGATTGGTGGTGGTTATGG+GGG | - | chr7.3:86996834-86996853 | MS.gene79561:intron | 55.0% |
!! | CGATTGGTGGTGGTTATGGG+GGG | - | chr7.3:86996835-86996854 | MS.gene79561:intron | 55.0% |
!! | CTCTGATTCAGGTTGCGGCA+CGG | - | chr7.3:86996694-86996713 | MS.gene79561:intron | 55.0% |
!! | GCTCCGATTGGTGGTGGTTA+TGG | - | chr7.3:86996831-86996850 | MS.gene79561:intron | 55.0% |
ATCGGCAGCATCATTGGCCG+CGG | - | chr7.3:86994144-86994163 | MS.gene79561:intron | 60.0% | |
GCTTCGCCAGAAGGACCAGA+TGG | - | chr7.3:86997701-86997720 | MS.gene79561:CDS | 60.0% | |
GGAAGACGACATGGACGTGG+TGG | - | chr7.3:86997746-86997765 | MS.gene79561:CDS | 60.0% | |
GGAATGGCTCCGATTGGTGG+TGG | - | chr7.3:86996825-86996844 | MS.gene79561:intron | 60.0% | |
GGTCCATGTATCCGGGCTCA+AGG | - | chr7.3:86996886-86996905 | MS.gene79561:intron | 60.0% | |
GTATGCGGCCGGTGGTTCAA+TGG | - | chr7.3:86996773-86996792 | MS.gene79561:intron | 60.0% | |
TCAAAGCGCAAAGCGGCAGC+CGG | + | chr7.3:86995605-86995624 | None:intergenic | 60.0% | |
TCTGGTCCTTCTGGCGAAGC+AGG | + | chr7.3:86997701-86997720 | None:intergenic | 60.0% | |
TCTGTGTCGTGGGTCGTGCT+CGG | - | chr7.3:86994493-86994512 | MS.gene79561:intron | 60.0% | |
GAGCCCGGATACATGGACCG+TGG | + | chr7.3:86996885-86996904 | None:intergenic | 65.0% | |
GCGGCCGGTGGTTCAATGGT+GGG | - | chr7.3:86996777-86996796 | MS.gene79561:intron | 65.0% | |
GTTCCTGGGGTGTATGCGGC+CGG | - | chr7.3:86996762-86996781 | MS.gene79561:intron | 65.0% | |
GTTTCACGATCTCGCCGCCG+CGG | + | chr7.3:86994164-86994183 | None:intergenic | 65.0% | |
TGCGGCCGGTGGTTCAATGG+TGG | - | chr7.3:86996776-86996795 | MS.gene79561:intron | 65.0% | |
GGCAGCATCATTGGCCGCGG+CGG | - | chr7.3:86994147-86994166 | MS.gene79561:CDS | 70.0% | |
CCACCGGCCGCATACACCCC+AGG | + | chr7.3:86996768-86996787 | None:intergenic | 75.0% | |
CCTGGGGTGTATGCGGCCGG+TGG | - | chr7.3:86996765-86996784 | MS.gene79561:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 86993967 | 86998027 | 86993967 | ID=MS.gene79561 |
chr7.3 | mRNA | 86993967 | 86998027 | 86993967 | ID=MS.gene79561.t1;Parent=MS.gene79561 |
chr7.3 | exon | 86997590 | 86998027 | 86997590 | ID=MS.gene79561.t1.exon1;Parent=MS.gene79561.t1 |
chr7.3 | CDS | 86997590 | 86998027 | 86997590 | ID=cds.MS.gene79561.t1;Parent=MS.gene79561.t1 |
chr7.3 | exon | 86996350 | 86996529 | 86996350 | ID=MS.gene79561.t1.exon2;Parent=MS.gene79561.t1 |
chr7.3 | CDS | 86996350 | 86996529 | 86996350 | ID=cds.MS.gene79561.t1;Parent=MS.gene79561.t1 |
chr7.3 | exon | 86994903 | 86995331 | 86994903 | ID=MS.gene79561.t1.exon3;Parent=MS.gene79561.t1 |
chr7.3 | CDS | 86994903 | 86995331 | 86994903 | ID=cds.MS.gene79561.t1;Parent=MS.gene79561.t1 |
chr7.3 | exon | 86994526 | 86994783 | 86994526 | ID=MS.gene79561.t1.exon4;Parent=MS.gene79561.t1 |
chr7.3 | CDS | 86994526 | 86994783 | 86994526 | ID=cds.MS.gene79561.t1;Parent=MS.gene79561.t1 |
chr7.3 | exon | 86994147 | 86994419 | 86994147 | ID=MS.gene79561.t1.exon5;Parent=MS.gene79561.t1 |
chr7.3 | CDS | 86994147 | 86994419 | 86994147 | ID=cds.MS.gene79561.t1;Parent=MS.gene79561.t1 |
chr7.3 | exon | 86993967 | 86994035 | 86993967 | ID=MS.gene79561.t1.exon6;Parent=MS.gene79561.t1 |
chr7.3 | CDS | 86993967 | 86994035 | 86993967 | ID=cds.MS.gene79561.t1;Parent=MS.gene79561.t1 |
Gene Sequence |
Protein sequence |